| Clone Name | rbasd14a13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115K11, full insert sequence Length = 1791 Score = 256 bits (129), Expect = 5e-65 Identities = 185/204 (90%) Strand = Plus / Minus Query: 188 caatcagtagtcgncgcctctggatatgacttctttacaggttggccggagcaaaatggt 247 ||||||||||||| ||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 1536 caatcagtagtcgtcgcctctggatatgacttccttgcaggttggccggagtaagatggt 1477 Query: 248 gtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtacggctgaac 307 ||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 1476 gtgctcaaattgtgacacatagcttcccctcacgtcgcacaatggaggatacggctgaac 1417 Query: 308 aatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccgatgcggtc 367 ||| ||||| || |||||||||||||||||||||||||| |||||||| || | |||||| Sbjct: 1416 aataccaacgtcgcatagatttttcagtgccatgagatacttggtctcaccaaggcggtc 1357 Query: 368 caagtaccggcggcaaaatgcaag 391 |||||||||||| ||||| ||||| Sbjct: 1356 caagtaccggcgacaaaaagcaag 1333
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 153 bits (77), Expect = 5e-34 Identities = 106/116 (91%) Strand = Plus / Minus Query: 188 caatcagtagtcgncgcctctggatatgacttctttacaggttggccggagcaaaatggt 247 ||||||||||||| ||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 68293 caatcagtagtcgtcgcctctggatatgacttccttgcaggttggccggagtaagatggt 68234 Query: 248 gtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtacggct 303 ||||||||| || |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 68233 gtgctcaaattgtgacacatagcttcccctcacgtcgcacaatggaggatacggct 68178 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Minus Query: 302 ctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccgat 361 ||||||||| ||||| || |||||||||||||||||||||||||| |||||||| || | Sbjct: 68096 ctgaacaataccaacgtcgcatagatttttcagtgccatgagatacttggtctcaccaag 68037 Query: 362 gcggtccaagtaccggcggcaaaatgcaag 391 |||||||||||||||||| ||||| ||||| Sbjct: 68036 gcggtccaagtaccggcgacaaaaagcaag 68007
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 153 bits (77), Expect = 5e-34 Identities = 106/116 (91%) Strand = Plus / Minus Query: 188 caatcagtagtcgncgcctctggatatgacttctttacaggttggccggagcaaaatggt 247 ||||||||||||| ||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 26943326 caatcagtagtcgtcgcctctggatatgacttccttgcaggttggccggagtaagatggt 26943267 Query: 248 gtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtacggct 303 ||||||||| || |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 26943266 gtgctcaaattgtgacacatagcttcccctcacgtcgcacaatggaggatacggct 26943211 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Minus Query: 302 ctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccgat 361 ||||||||| ||||| || |||||||||||||||||||||||||| |||||||| || | Sbjct: 26943129 ctgaacaataccaacgtcgcatagatttttcagtgccatgagatacttggtctcaccaag 26943070 Query: 362 gcggtccaagtaccggcggcaaaatgcaag 391 |||||||||||||||||| ||||| ||||| Sbjct: 26943069 gcggtccaagtaccggcgacaaaaagcaag 26943040
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 153 bits (77), Expect = 5e-34 Identities = 106/116 (91%) Strand = Plus / Minus Query: 188 caatcagtagtcgncgcctctggatatgacttctttacaggttggccggagcaaaatggt 247 ||||||||||||| ||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 26871496 caatcagtagtcgtcgcctctggatatgacttccttgcaggttggccggagtaagatggt 26871437 Query: 248 gtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtacggct 303 ||||||||| || |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 26871436 gtgctcaaattgtgacacatagcttcccctcacgtcgcacaatggaggatacggct 26871381 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Minus Query: 302 ctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccgat 361 ||||||||| ||||| || |||||||||||||||||||||||||| |||||||| || | Sbjct: 26871299 ctgaacaataccaacgtcgcatagatttttcagtgccatgagatacttggtctcaccaag 26871240 Query: 362 gcggtccaagtaccggcggcaaaatgcaag 391 |||||||||||||||||| ||||| ||||| Sbjct: 26871239 gcggtccaagtaccggcgacaaaaagcaag 26871210
>ref|XM_483588.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 151 bits (76), Expect = 2e-33 Identities = 133/152 (87%) Strand = Plus / Minus Query: 204 cctctggatatgacttctttacaggttggccggagcaaaatggtgtgctcaaactgggac 263 ||||||||||||||||| || |||||||||||||||||||||||||| ||| | || ||| Sbjct: 1376 cctctggatatgacttccttgcaggttggccggagcaaaatggtgtgttcagattgtgac 1317 Query: 264 acatagcttcccctcacgtcgcacagcggagggtacggctgaacaatgccaacatcacat 323 ||||||||||||||||| || |||| ||||| | |||| |||||||||| |||| || Sbjct: 1316 acatagcttcccctcacatcacacattggaggacatggctcaacaatgccagcatcgcac 1257 Query: 324 agatttttcagtgccatgagatatttggtctc 355 |||||||||||||||||||| || |||||||| Sbjct: 1256 agatttttcagtgccatgaggtacttggtctc 1225
>gb|AY105027.1| Zea mays PCO081602 mRNA sequence Length = 1570 Score = 131 bits (66), Expect = 2e-27 Identities = 140/165 (84%) Strand = Plus / Minus Query: 191 tcagtagtcgncgcctctggatatgacttctttacaggttggccggagcaaaatggtgtg 250 ||||||||| |||||||||| ||||| ||||| || ||||||||||| || || ||||| Sbjct: 1570 tcagtagtcatcgcctctggaaatgacctctttgcaagttggccggagtaagattgtgtg 1511 Query: 251 ctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtacggctgaacaat 310 ||||||||| || || ||||| || ||||| |||||||| ||||||||||||||||| || Sbjct: 1510 ctcaaactgtgagacgtagctccctctcacatcgcacaggggagggtacggctgaacgat 1451 Query: 311 gccaacatcacatagatttttcagtgccatgagatatttggtctc 355 |||| ||||| ||||| ||||| |||||||| || |||||||| Sbjct: 1450 gccattgtcacaaagattcttcagagccatgaggtacttggtctc 1406
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 204 cctctggatatgacttctttacaggttggccggagcaaaatggtgtgctcaaactgggac 263 ||||||||||||||||| || |||||||||||||||||||||||||| ||| | || ||| Sbjct: 27116645 cctctggatatgacttccttgcaggttggccggagcaaaatggtgtgttcagattgtgac 27116704 Query: 264 acatagcttcccctcac 280 ||||||||||||||||| Sbjct: 27116705 acatagcttcccctcac 27116721 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 305 aacaatgccaacatcacatagatttttcagtgccatgagatatttggtctc 355 |||||||||| |||| || |||||||||||||||||||| || |||||||| Sbjct: 27116844 aacaatgccagcatcgcacagatttttcagtgccatgaggtacttggtctc 27116894
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 204 cctctggatatgacttctttacaggttggccggagcaaaatggtgtgctcaaactgggac 263 ||||||||||||||||| || |||||||||||||||||||||||||| ||| | || ||| Sbjct: 17678 cctctggatatgacttccttgcaggttggccggagcaaaatggtgtgttcagattgtgac 17737 Query: 264 acatagcttcccctcac 280 ||||||||||||||||| Sbjct: 17738 acatagcttcccctcac 17754 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 305 aacaatgccaacatcacatagatttttcagtgccatgagatatttggtctc 355 |||||||||| |||| || |||||||||||||||||||| || |||||||| Sbjct: 17877 aacaatgccagcatcgcacagatttttcagtgccatgaggtacttggtctc 17927
>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1211_G06 Length = 96421 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 204 cctctggatatgacttctttacaggttggccggagcaaaatggtgtgctcaaactgggac 263 ||||||||||||||||| || |||||||||||||||||||||||||| ||| | || ||| Sbjct: 87732 cctctggatatgacttccttgcaggttggccggagcaaaatggtgtgttcagattgtgac 87791 Query: 264 acatagcttcccctcac 280 ||||||||||||||||| Sbjct: 87792 acatagcttcccctcac 87808 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 305 aacaatgccaacatcacatagatttttcagtgccatgagatatttggtctc 355 |||||||||| |||| || |||||||||||||||||||| || |||||||| Sbjct: 87931 aacaatgccagcatcgcacagatttttcagtgccatgaggtacttggtctc 87981
>ref|NM_180394.1| Arabidopsis thaliana MAP2B (METHIONINE AMINOPEPTIDASE 2B); methionyl aminopeptidase AT3G59990 (MAP2B) transcript variant AT3G59990.2 mRNA, complete cds Length = 1686 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 240 aaaatggtgtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtac 299 ||||||||||| |||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct: 1435 aaaatggtgtgttcaaactgtgatacatagcttcctttcacatcacacagaggaggatac 1376 Query: 300 ggctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccg 359 ||||||||||||||| ||||| ||||| || || ||||| | |||||||| || || Sbjct: 1375 ggctgaacaatgccagagtcacaaagattctttagagccattaagtatttggtttcacca 1316 Query: 360 atgcggtccaa 370 ||||||||||| Sbjct: 1315 atgcggtccaa 1305
>ref|NM_001035821.1| Arabidopsis thaliana MAP2B (METHIONINE AMINOPEPTIDASE 2B); methionyl aminopeptidase AT3G59990 (MAP2B) transcript variant AT3G59990.3 mRNA, complete cds Length = 1594 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 240 aaaatggtgtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtac 299 ||||||||||| |||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct: 1343 aaaatggtgtgttcaaactgtgatacatagcttcctttcacatcacacagaggaggatac 1284 Query: 300 ggctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccg 359 ||||||||||||||| ||||| ||||| || || ||||| | |||||||| || || Sbjct: 1283 ggctgaacaatgccagagtcacaaagattctttagagccattaagtatttggtttcacca 1224 Query: 360 atgcggtccaa 370 ||||||||||| Sbjct: 1223 atgcggtccaa 1213
>ref|NM_115862.2| Arabidopsis thaliana MAP2B (METHIONINE AMINOPEPTIDASE 2B); methionyl aminopeptidase AT3G59990 (MAP2B) transcript variant AT3G59990.1 mRNA, complete cds Length = 1620 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 240 aaaatggtgtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtac 299 ||||||||||| |||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct: 1369 aaaatggtgtgttcaaactgtgatacatagcttcctttcacatcacacagaggaggatac 1310 Query: 300 ggctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccg 359 ||||||||||||||| ||||| ||||| || || ||||| | |||||||| || || Sbjct: 1309 ggctgaacaatgccagagtcacaaagattctttagagccattaagtatttggtttcacca 1250 Query: 360 atgcggtccaa 370 ||||||||||| Sbjct: 1249 atgcggtccaa 1239
>gb|BT000063.1| Arabidopsis thaliana putative protein (At3g59990) mRNA, complete cds Length = 1416 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 240 aaaatggtgtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtac 299 ||||||||||| |||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct: 1271 aaaatggtgtgttcaaactgtgatacatagcttcctttcacatcacacagaggaggatac 1212 Query: 300 ggctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccg 359 ||||||||||||||| ||||| ||||| || || ||||| | |||||||| || || Sbjct: 1211 ggctgaacaatgccagagtcacaaagattctttagagccattaagtatttggtttcacca 1152 Query: 360 atgcggtccaa 370 ||||||||||| Sbjct: 1151 atgcggtccaa 1141
>gb|AY065161.1| Arabidopsis thaliana putative protein (F24G16.26) mRNA, complete cds Length = 1637 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 240 aaaatggtgtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtac 299 ||||||||||| |||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct: 1389 aaaatggtgtgttcaaactgtgatacatagcttcctttcacatcacacagaggaggatac 1330 Query: 300 ggctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccg 359 ||||||||||||||| ||||| ||||| || || ||||| | |||||||| || || Sbjct: 1329 ggctgaacaatgccagagtcacaaagattctttagagccattaagtatttggtttcacca 1270 Query: 360 atgcggtccaa 370 ||||||||||| Sbjct: 1269 atgcggtccaa 1259
>dbj|AK221438.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL06-12-J19 Length = 743 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 240 aaaatggtgtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtac 299 ||||||||||| |||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct: 487 aaaatggtgtgttcaaactgtgatacatagcttcctttcacatcacacagaggaggatac 428 Query: 300 ggctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccg 359 ||||||||||||||| ||||| ||||| || || ||||| | |||||||| || || Sbjct: 427 ggctgaacaatgccagagtcacaaagattctttagagccattaagtatttggtttcacca 368 Query: 360 atgcggtccaa 370 ||||||||||| Sbjct: 367 atgcggtccaa 357
>gb|AF300880.1|AF300880 Arabidopsis thaliana putative methionine aminopeptidase 2 mRNA, complete cds Length = 1686 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 240 aaaatggtgtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtac 299 ||||||||||| |||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct: 1435 aaaatggtgtgttcaaactgtgatacatagcttcctttcacatcacacagaggaggatac 1376 Query: 300 ggctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccg 359 ||||||||||||||| ||||| ||||| || || ||||| | |||||||| || || Sbjct: 1375 ggctgaacaatgccagagtcacaaagattctttagagccattaagtatttggtttcacca 1316 Query: 360 atgcggtccaa 370 ||||||||||| Sbjct: 1315 atgcggtccaa 1305
>gb|AY084710.1| Arabidopsis thaliana clone 115696 mRNA, complete sequence Length = 1615 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 240 aaaatggtgtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtac 299 ||||||||||| |||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct: 1369 aaaatggtgtgttcaaactgtgatacatagcttcctttcacatcacacagaggaggatac 1310 Query: 300 ggctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgccg 359 ||||||||||||||| ||||| ||||| || || ||||| | |||||||| || || Sbjct: 1309 ggctgaacaatgccagagtcacaaagattctttagagccattaagtatttggtttcacca 1250 Query: 360 atgcggtccaa 370 ||||||||||| Sbjct: 1249 atgcggtccaa 1239
>emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F24G16 Length = 100906 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 240 aaaatggtgtgctcaaactgggacacatagcttcccctcacgtcgcacagcggagggtac 299 ||||||||||| |||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct: 88800 aaaatggtgtgttcaaactgtgatacatagcttcctttcacatcacacagaggaggatac 88859 Query: 300 ggctgaa 306 ||||||| Sbjct: 88860 ggctgaa 88866
>ref|XM_317113.2| Anopheles gambiae str. PEST ENSANGP00000019665 (ENSANGG00000017176), partial mRNA Length = 1317 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Minus Query: 225 caggttggccggagcaaaatggtgtgctcaaactgggacacatagcttcccctcacgtcg 284 ||||| ||||| |||| ||| |||||||| |||||| | ||||||||| |||||||| Sbjct: 1283 caggtgggccgcagcataatcgtgtgctcgtactgggccgtgtagcttcccttcacgtcg 1224 Query: 285 cacagcggagggtacg 300 |||||||| ||||||| Sbjct: 1223 cacagcggcgggtacg 1208
>gb|AC182701.2| Populus trichocarpa clone Pop1-74K8, complete sequence Length = 93140 Score = 52.0 bits (26), Expect = 0.001 Identities = 52/61 (85%) Strand = Plus / Minus Query: 193 agtagtcgncgcctctggatatgacttctttacaggttggccggagcaaaatggtgtgct 252 ||||||| |||| || |||||||| ||||| ||||||||||| ||||| ||||| |||| Sbjct: 12084 agtagtcatcgcccctcgatatgacctctttgcaggttggccgtagcaagatggtatgct 12025 Query: 253 c 253 | Sbjct: 12024 c 12024 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 302 ctgaacaatgccaacatcacatagatttttcagtgccatgagatatttggtctcgcc 358 ||||||||||||| |||||| ||||| || |||||||| | |||||| |||||||| Sbjct: 11525 ctgaacaatgccagaatcacacagattcttgagtgccattaaatatttagtctcgcc 11469
>emb|AL732607.9| Mouse DNA sequence from clone RP23-16B24 on chromosome 11 Contains a novel pseudogene, two novel genes and a methionine aminopeptidase 2 (Metap2) pseudogene, complete sequence Length = 66800 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 216 acttctttacaggttggccggagcaaaatggtgtgctcaaactg 259 |||||||||||| |||| |||| ||| |||||||| |||||||| Sbjct: 57472 acttctttacagattggacggaacaatatggtgtgttcaaactg 57515
>gb|BT013796.1| Lycopersicon esculentum clone 132716F, mRNA sequence Length = 2715 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 caaaatggtgtgctcaaactg 259 ||||||||||||||||||||| Sbjct: 2101 caaaatggtgtgctcaaactg 2081
>gb|AC147052.2| Pan troglodytes BAC clone RP43-143G1 from 7, complete sequence Length = 170236 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aacaatgccaacatcacatagattt 329 ||||||| ||||||||||||||||| Sbjct: 64310 aacaatggcaacatcacatagattt 64286
>gb|AC146125.2| Pan troglodytes BAC clone RP43-4K13 from 7, complete sequence Length = 172424 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 aacaatgccaacatcacatagattt 329 ||||||| ||||||||||||||||| Sbjct: 23969 aacaatggcaacatcacatagattt 23945
>emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on chromosome 9 Contains the 3' end of a novel gene (FLJ25636) and the 5' end of a novel gene (FLJ20276), complete sequence Length = 162126 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 tcagaaaacaaaagggtacaa 65 ||||||||||||||||||||| Sbjct: 80112 tcagaaaacaaaagggtacaa 80092
>gb|AF411809.1| Lycopersicon esculentum BAC clone FW2.2, complete sequence Length = 127892 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 caaaatggtgtgctcaaactg 259 ||||||||||||||||||||| Sbjct: 69090 caaaatggtgtgctcaaactg 69070
>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence Length = 221435 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 agatttttcagtgccatgag 343 |||||||||||||||||||| Sbjct: 169870 agatttttcagtgccatgag 169889
>gb|BC070892.1| Rattus norvegicus methionine aminopeptidase 2, mRNA (cDNA clone MGC:91685 IMAGE:7099147), complete cds Length = 1905 Score = 40.1 bits (20), Expect = 5.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 216 acttctttacaggttggccggagcaaaatggtgtgctcaaactg 259 ||||||||||||||||| || |||| ||||| || |||||||| Sbjct: 1413 acttctttacaggttgggcgcagcagtatggtatgttcaaactg 1370
>gb|BC043889.1| Xenopus laevis methionine aminopeptidase 2, mRNA (cDNA clone MGC:53792 IMAGE:5541807), complete cds Length = 1795 Score = 40.1 bits (20), Expect = 5.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 216 acttctttacaggttggccggagcaaaatggtgtgctcaaactg 259 |||||||| |||||||| || || || || |||||||||||||| Sbjct: 1424 acttctttgcaggttgggcgcagtaatattgtgtgctcaaactg 1381
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cggcggcaaaatgcaagtgt 394 |||||||||||||||||||| Sbjct: 2705924 cggcggcaaaatgcaagtgt 2705943
>emb|AL356866.22| Human DNA sequence from clone RP11-211D10 on chromosome 13 Contains a CpG island, complete sequence Length = 182321 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 tttaatctcagaaaacaaaagggtacaa 65 |||||| |||||||||||| |||||||| Sbjct: 163508 tttaatttcagaaaacaaaggggtacaa 163535
>ref|XM_962286.1| PREDICTED: Tribolium castaneum similar to CG11964-PA (LOC655727), mRNA Length = 1674 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cagtttccacaaattttaat 43 |||||||||||||||||||| Sbjct: 220 cagtttccacaaattttaat 201
>emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 in linkage group 24, complete sequence Length = 177516 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aacacaggtcacccaagatg 134 |||||||||||||||||||| Sbjct: 113929 aacacaggtcacccaagatg 113910
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 cggcggcaaaatgcaagtgt 394 |||||||||||||||||||| Sbjct: 1677370 cggcggcaaaatgcaagtgt 1677351
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttacaaaccagtttccacaa 35 |||||||||||||||||||| Sbjct: 14899871 ttacaaaccagtttccacaa 14899890
>ref|XM_574154.1| PREDICTED: Rattus norvegicus similar to Methionine aminopeptidase 2 (MetAP 2) (Peptidase M 2) (Initiation factor 2 associated 67 kDa glycoprotein) (p67) (p67eIF2) (LOC498869), mRNA Length = 3149 Score = 40.1 bits (20), Expect = 5.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 216 acttctttacaggttggccggagcaaaatggtgtgctcaaactg 259 ||||||||||||||||| || |||| ||||| || |||||||| Sbjct: 2702 acttctttacaggttgggcgcagcagtatggtatgttcaaactg 2659
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 69 aactgcattatttgtccgattctgatgt 96 ||||| |||||| ||||||||||||||| Sbjct: 2951863 aactggattattggtccgattctgatgt 2951890
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 gatggtagtaaaacactaatcgct 154 |||||||||||||||||| ||||| Sbjct: 3150873 gatggtagtaaaacactagtcgct 3150896 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 aatggtgtgctcaaactggg 261 |||||||||||||||||||| Sbjct: 2793875 aatggtgtgctcaaactggg 2793856
>gb|BC091150.1| Rattus norvegicus methionine aminopeptidase 2, mRNA (cDNA clone MGC:108689 IMAGE:7122560), complete cds Length = 1986 Score = 40.1 bits (20), Expect = 5.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 216 acttctttacaggttggccggagcaaaatggtgtgctcaaactg 259 ||||||||||||||||| || |||| ||||| || |||||||| Sbjct: 1512 acttctttacaggttgggcgcagcagtatggtatgttcaaactg 1469
>dbj|AB077950.1| Synechocystis sp. PCC 6803 gene for photoreceptor for positive phototaxis PixJ1, complete cds Length = 3003 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 gatggtagtaaaacactaatcgct 154 |||||||||||||||||| ||||| Sbjct: 1105 gatggtagtaaaacactagtcgct 1082 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,410,302 Number of Sequences: 3902068 Number of extensions: 3410302 Number of successful extensions: 65876 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65701 Number of HSP's gapped (non-prelim): 175 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)