ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13k17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467536.1| Oryza sativa (japonica cultivar-group), mRNA 343 4e-91
2gb|AY104650.1| Zea mays PCO104630 mRNA sequence 305 8e-80
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
4dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
5dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
6dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone... 66 1e-07
7gb|AC008115.4| Homo sapiens 12 BAC RP11-180M15 (Roswell Park Can... 42 2.0
8ref|NM_126079.2| Arabidopsis thaliana unknown protein AT5G66810 ... 40 7.8
9ref|NM_001035385.1| Bos taurus olfactomedin-like 1 (OLFML1), mRNA 40 7.8
10ref|NM_191472.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
11gb|AC004620.1| Homo sapiens chromosome 5, PAC clone 66p19 (LBNL ... 40 7.8
12gb|AC005593.1| Homo sapiens chromosome 5, P1 clone 1369f10 (LBNL... 40 7.8
13gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.8
15gb|AC006392.1| Homo sapiens BAC clone RP11-520M18 from 7, comple... 40 7.8
16emb|CR339042.13| Zebrafish DNA sequence from clone CH211-268L18 ... 40 7.8
17gb|AC121570.4| Mus musculus BAC clone RP23-228G6 from 16, comple... 40 7.8
18emb|CR732861.2|CNS0GSEL Tetraodon nigroviridis full-length cDNA 40 7.8
19emb|CR732377.2|CNS0GS1Q Tetraodon nigroviridis full-length cDNA 40 7.8
20emb|CR651783.2|CNS0F1VX Tetraodon nigroviridis full-length cDNA 40 7.8
21emb|CR649634.2|CNS0F088 Tetraodon nigroviridis full-length cDNA 40 7.8
22emb|CR639954.2|CNS0ESRC Tetraodon nigroviridis full-length cDNA 40 7.8
23emb|CR634829.2|CNS0EOSZ Tetraodon nigroviridis full-length cDNA 40 7.8
24gb|BC109584.1| Bos taurus olfactomedin-like 1, mRNA (cDNA clone ... 40 7.8
25gb|AC105057.7| Homo sapiens 3 BAC RP11-543P4 (Roswell Park Cance... 40 7.8
26emb|AL833181.1|HSM804492 Homo sapiens mRNA; cDNA DKFZp667E155 (f... 40 7.8
27gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, com... 40 7.8
28gb|AC008695.9|AC008695 Homo sapiens chromosome 5 clone CTB-6P6, ... 40 7.8
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
32gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, comple... 40 7.8
33gb|AC106875.5| Homo sapiens BAC clone RP11-494G9 from 2, complet... 40 7.8
34gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
35dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
36dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.8
37gb|BT021753.1| Bos taurus olfactomedin-like 1 (OLFML1), mRNA, co... 40 7.8
38gb|AC155268.1| Mus musculus BAC clone RP23-204K22 from 16, compl... 40 7.8
39emb|AL845282.12| Zebrafish DNA sequence from clone DKEY-28P18 in... 40 7.8
40emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on ch... 40 7.8 
>ref|XM_467536.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1026

 Score =  343 bits (173), Expect = 4e-91
 Identities = 264/294 (89%), Gaps = 3/294 (1%)
 Strand = Plus / Minus

                                                                        
Query: 283  ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 342
            ||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 1026 ttacccccttgtcttcgccctcttcattccaaggctgttgtggaaaggggaagctgagcc 967

                                                                        
Query: 343  agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 402
            ||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 966  agatctttgcatcccttcttcacggagggtgccattgagcatggcgagttcccggagctg 907

                                                                        
Query: 403  ctgcttcttgaagaagtcctgagactcgtcctgcattggccttaacagatcctcaaggat 462
            ||||||||||||||||||||||||||||||   ||  ||| | | |||||| ||||||||
Sbjct: 906  ctgcttcttgaagaagtcctgagactcgtc---cacaggcttcagcagatcttcaaggat 850

                                                                        
Query: 463  ctcacgggcttgcatcagacgagcatcaataatttcaacaggcagctctgcctcaaccaa 522
             ||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||
Sbjct: 849  atcacgggcttggatcagacgggtatcaataatttcaacaggcagttctgcctcaaccaa 790

                                                                  
Query: 523  tatatgtaggggttcattaagatgttcatatcctggctttncacgcatcatgtc 576
            ||| || ||||||||||| ||||||||||| ||||| ||  | |||||||||||
Sbjct: 789  tatgtgcaggggttcattcagatgttcataacctggtttccctcgcatcatgtc 736
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>gb|AY104650.1| Zea mays PCO104630 mRNA sequence
          Length = 1431

 Score =  305 bits (154), Expect = 8e-80
 Identities = 257/291 (88%), Gaps = 3/291 (1%)
 Strand = Plus / Minus

                                                                       
Query: 283 ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 342
           |||||||||||||||||| |||||||| ||||||||||||||||||||||| || |||||
Sbjct: 985 ttacccccttgtcttggctctcttcatcccaaggctgttgtggaaaggggacgctgaacc 926

                                                                       
Query: 343 agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 402
            ||||| ||||||||||| ||||| |||||||| || ||||| ||||||||||| |||||
Sbjct: 925 ggatctctgcatcccttcctcacgaagggtgccattaagcatcgcaagctcccgtagctg 866

                                                                       
Query: 403 ctgcttcttgaagaagtcctgagactcgtcctgcattggccttaacagatcctcaaggat 462
           ||||||||||||| ||||||| || ||||||   |  ||| ||| |||||| ||||||||
Sbjct: 865 ctgcttcttgaagtagtcctgggattcgtcc---acaggctttagcagatcttcaaggat 809

                                                                       
Query: 463 ctcacgggcttgcatcagacgagcatcaataatttcaacaggcagctctgcctcaaccaa 522
           ||| |||||||||||||| || |||||||| ||||||||||| |||||||||||||||||
Sbjct: 808 ctcgcgggcttgcatcaggcgcgcatcaatgatttcaacaggtagctctgcctcaaccaa 749

                                                              
Query: 523 tatatgtaggggttcattaagatgttcatatcctggctttncacgcatcat 573
           |||||| ||||||||||| || |||||||||||||||||  | ||||||||
Sbjct: 748 tatatggaggggttcattcaggtgttcatatcctggcttccctcgcatcat 698
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  244 bits (123), Expect = 3e-61
 Identities = 147/155 (94%)
 Strand = Plus / Minus

                                                                            
Query: 283      ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 342
                ||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 30033668 ttacccccttgtcttcgccctcttcattccaaggctgttgtggaaaggggaagctgagcc 30033609

                                                                            
Query: 343      agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 402
                ||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 30033608 agatctttgcatcccttcttcacggagggtgccattgagcatggcgagttcccggagctg 30033549

                                                   
Query: 403      ctgcttcttgaagaagtcctgagactcgtcctgca 437
                |||||||||||||||||||||||||||||||||||
Sbjct: 30033548 ctgcttcttgaagaagtcctgagactcgtcctgca 30033514



 Score =  147 bits (74), Expect = 5e-32
 Identities = 115/129 (89%)
 Strand = Plus / Minus

                                                                            
Query: 448      cagatcctcaaggatctcacgggcttgcatcagacgagcatcaataatttcaacaggcag 507
                |||||| |||||||| ||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 30033382 cagatcttcaaggatatcacgggcttggatcagacgggtatcaataatttcaacaggcag 30033323

                                                                            
Query: 508      ctctgcctcaaccaatatatgtaggggttcattaagatgttcatatcctggctttncacg 567
                 ||||||||||||||||| || ||||||||||| ||||||||||| ||||| ||  | ||
Sbjct: 30033322 ttctgcctcaaccaatatgtgcaggggttcattcagatgttcataacctggtttccctcg 30033263

                         
Query: 568      catcatgtc 576
                |||||||||
Sbjct: 30033262 catcatgtc 30033254



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                            
Query: 144      gtattatcaagtacgggctgctccgatgctagcggtgcgagaccatttttgcgccattag 203
                |||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||| ||
Sbjct: 30033810 gtattatcaagtacgggccgctccgatgctggcggtgcgagaccgtttttgggccatcag 30033751

                                           
Query: 204      ccacgaaggcagacccataggcatact 230
                |||  ||||||  ||||||||||||||
Sbjct: 30033750 ccagcaaggcaaccccataggcatact 30033724



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                          
Query: 9        atcaaaaccccagtcat-agctcatagcaatacacaaaccac 49
                |||||||||||||  || || |||||||||||||||||||||
Sbjct: 30033961 atcaaaaccccagatatcagttcatagcaatacacaaaccac 30033920
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>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0685G12
          Length = 149155

 Score =  244 bits (123), Expect = 3e-61
 Identities = 147/155 (94%)
 Strand = Plus / Minus

                                                                         
Query: 283   ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 342
             ||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 13265 ttacccccttgtcttcgccctcttcattccaaggctgttgtggaaaggggaagctgagcc 13206

                                                                         
Query: 343   agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 402
             ||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 13205 agatctttgcatcccttcttcacggagggtgccattgagcatggcgagttcccggagctg 13146

                                                
Query: 403   ctgcttcttgaagaagtcctgagactcgtcctgca 437
             |||||||||||||||||||||||||||||||||||
Sbjct: 13145 ctgcttcttgaagaagtcctgagactcgtcctgca 13111



 Score =  147 bits (74), Expect = 5e-32
 Identities = 115/129 (89%)
 Strand = Plus / Minus

                                                                         
Query: 448   cagatcctcaaggatctcacgggcttgcatcagacgagcatcaataatttcaacaggcag 507
             |||||| |||||||| ||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 12979 cagatcttcaaggatatcacgggcttggatcagacgggtatcaataatttcaacaggcag 12920

                                                                         
Query: 508   ctctgcctcaaccaatatatgtaggggttcattaagatgttcatatcctggctttncacg 567
              ||||||||||||||||| || ||||||||||| ||||||||||| ||||| ||  | ||
Sbjct: 12919 ttctgcctcaaccaatatgtgcaggggttcattcagatgttcataacctggtttccctcg 12860

                      
Query: 568   catcatgtc 576
             |||||||||
Sbjct: 12859 catcatgtc 12851



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                         
Query: 144   gtattatcaagtacgggctgctccgatgctagcggtgcgagaccatttttgcgccattag 203
             |||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||| ||
Sbjct: 13407 gtattatcaagtacgggccgctccgatgctggcggtgcgagaccgtttttgggccatcag 13348

                                        
Query: 204   ccacgaaggcagacccataggcatact 230
             |||  ||||||  ||||||||||||||
Sbjct: 13347 ccagcaaggcaaccccataggcatact 13321



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                       
Query: 9     atcaaaaccccagtcat-agctcatagcaatacacaaaccac 49
             |||||||||||||  || || |||||||||||||||||||||
Sbjct: 13558 atcaaaaccccagatatcagttcatagcaatacacaaaccac 13517
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>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0654B04
          Length = 156907

 Score =  244 bits (123), Expect = 3e-61
 Identities = 147/155 (94%)
 Strand = Plus / Minus

                                                                          
Query: 283    ttacccccttgtcttggccctcttcattccaaggctgttgtggaaaggggatgcggaacc 342
              ||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 133944 ttacccccttgtcttcgccctcttcattccaaggctgttgtggaaaggggaagctgagcc 133885

                                                                          
Query: 343    agatctttgcatcccttcttcacggagggtgccgttgagcattgcaagctcccggagctg 402
              ||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 133884 agatctttgcatcccttcttcacggagggtgccattgagcatggcgagttcccggagctg 133825

                                                 
Query: 403    ctgcttcttgaagaagtcctgagactcgtcctgca 437
              |||||||||||||||||||||||||||||||||||
Sbjct: 133824 ctgcttcttgaagaagtcctgagactcgtcctgca 133790



 Score =  147 bits (74), Expect = 5e-32
 Identities = 115/129 (89%)
 Strand = Plus / Minus

                                                                          
Query: 448    cagatcctcaaggatctcacgggcttgcatcagacgagcatcaataatttcaacaggcag 507
              |||||| |||||||| ||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 133658 cagatcttcaaggatatcacgggcttggatcagacgggtatcaataatttcaacaggcag 133599

                                                                          
Query: 508    ctctgcctcaaccaatatatgtaggggttcattaagatgttcatatcctggctttncacg 567
               ||||||||||||||||| || ||||||||||| ||||||||||| ||||| ||  | ||
Sbjct: 133598 ttctgcctcaaccaatatgtgcaggggttcattcagatgttcataacctggtttccctcg 133539

                       
Query: 568    catcatgtc 576
              |||||||||
Sbjct: 133538 catcatgtc 133530



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                          
Query: 144    gtattatcaagtacgggctgctccgatgctagcggtgcgagaccatttttgcgccattag 203
              |||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||| ||
Sbjct: 134086 gtattatcaagtacgggccgctccgatgctggcggtgcgagaccgtttttgggccatcag 134027

                                         
Query: 204    ccacgaaggcagacccataggcatact 230
              |||  ||||||  ||||||||||||||
Sbjct: 134026 ccagcaaggcaaccccataggcatact 134000



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                        
Query: 9      atcaaaaccccagtcat-agctcatagcaatacacaaaccac 49
              |||||||||||||  || || |||||||||||||||||||||
Sbjct: 134237 atcaaaaccccagatatcagttcatagcaatacacaaaccac 134196
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>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083,
              complete sequence
          Length = 120016

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 371    gtgccgttgagcattgcaagctcccggagctgctgcttcttgaagaagtcctgagactcg 430
              ||||| ||||||| ||| || ||||| ||||||||||||||| || |||||||||| |||
Sbjct: 104308 gtgccattgagcagtgctagttcccgaagctgctgcttcttgtagtagtcctgagattcg 104249

                   
Query: 431    tcctg 435
              |||||
Sbjct: 104248 tcctg 104244



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                        
Query: 283    ttacccccttgtcttggccctcttcattccaaggctgttgtg 324
              ||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 104396 ttaccccctggtcttggcccttttcataccaaggctgttgtg 104355
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>gb|AC008115.4| Homo sapiens 12 BAC RP11-180M15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 157892

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   gtactcatggccttttacccc 289
             |||||||||||||||||||||
Sbjct: 11412 gtactcatggccttttacccc 11392
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>ref|NM_126079.2| Arabidopsis thaliana unknown protein AT5G66810 mRNA, complete cds
          Length = 2398

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 accaaacctctccagtagca 121
           ||||||||||||||||||||
Sbjct: 617 accaaacctctccagtagca 636
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>ref|NM_001035385.1| Bos taurus olfactomedin-like 1 (OLFML1), mRNA
          Length = 2084

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 399 gctgctgcttcttgaagaag 418
           ||||||||||||||||||||
Sbjct: 338 gctgctgcttcttgaagaag 319
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>ref|NM_191472.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  cttaacagatcctcaaggat 462
            ||||||||||||||||||||
Sbjct: 1571 cttaacagatcctcaaggat 1552
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>gb|AC004620.1| Homo sapiens chromosome 5, PAC clone 66p19 (LBNL H84), complete
             sequence
          Length = 49021

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   gctgctgcttcttgaagaag 418
             ||||||||||||||||||||
Sbjct: 47705 gctgctgcttcttgaagaag 47686
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>gb|AC005593.1| Homo sapiens chromosome 5, P1 clone 1369f10 (LBNL H28), complete
           sequence
          Length = 83666

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 399 gctgctgcttcttgaagaag 418
           ||||||||||||||||||||
Sbjct: 799 gctgctgcttcttgaagaag 780
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>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22,
              complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    caataatttcaacaggcagc 508
              ||||||||||||||||||||
Sbjct: 117425 caataatttcaacaggcagc 117406
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 315      ggctgttgtggaaaggggat 334
                ||||||||||||||||||||
Sbjct: 11361973 ggctgttgtggaaaggggat 11361992
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>gb|AC006392.1| Homo sapiens BAC clone RP11-520M18 from 7, complete sequence
          Length = 117381

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   ctctgcctcaaccaatatat 527
             ||||||||||||||||||||
Sbjct: 11864 ctctgcctcaaccaatatat 11883
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>emb|CR339042.13| Zebrafish DNA sequence from clone CH211-268L18 in linkage group 21,
             complete sequence
          Length = 176058

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   agcatcaataatttcaacag 503
             ||||||||||||||||||||
Sbjct: 25774 agcatcaataatttcaacag 25793
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>gb|AC121570.4| Mus musculus BAC clone RP23-228G6 from 16, complete sequence
          Length = 184174

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    ataaccaaacctctccagta 118
             ||||||||||||||||||||
Sbjct: 42287 ataaccaaacctctccagta 42268
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>emb|CR732861.2|CNS0GSEL Tetraodon nigroviridis full-length cDNA
          Length = 509

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 ggctgctccgatgctagcgg 178
           ||||||||||||||||||||
Sbjct: 233 ggctgctccgatgctagcgg 214
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>emb|CR732377.2|CNS0GS1Q Tetraodon nigroviridis full-length cDNA
          Length = 509

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 ggctgctccgatgctagcgg 178
           ||||||||||||||||||||
Sbjct: 233 ggctgctccgatgctagcgg 214
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>emb|CR651783.2|CNS0F1VX Tetraodon nigroviridis full-length cDNA
          Length = 853

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 ggctgctccgatgctagcgg 178
           ||||||||||||||||||||
Sbjct: 219 ggctgctccgatgctagcgg 200
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>emb|CR649634.2|CNS0F088 Tetraodon nigroviridis full-length cDNA
          Length = 1370

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 ggctgctccgatgctagcgg 178
           ||||||||||||||||||||
Sbjct: 983 ggctgctccgatgctagcgg 964
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>emb|CR639954.2|CNS0ESRC Tetraodon nigroviridis full-length cDNA
          Length = 1121

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 ggctgctccgatgctagcgg 178
           ||||||||||||||||||||
Sbjct: 735 ggctgctccgatgctagcgg 716
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>emb|CR634829.2|CNS0EOSZ Tetraodon nigroviridis full-length cDNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 ggctgctccgatgctagcgg 178
           ||||||||||||||||||||
Sbjct: 984 ggctgctccgatgctagcgg 965
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>gb|BC109584.1| Bos taurus olfactomedin-like 1, mRNA (cDNA clone MGC:133781
           IMAGE:8058185), complete cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 399 gctgctgcttcttgaagaag 418
           ||||||||||||||||||||
Sbjct: 369 gctgctgcttcttgaagaag 350
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>gb|AC105057.7| Homo sapiens 3 BAC RP11-543P4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165602

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tcatagcaatacacaaacca 48
             ||||||||||||||||||||
Sbjct: 86205 tcatagcaatacacaaacca 86224
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>emb|AL833181.1|HSM804492 Homo sapiens mRNA; cDNA DKFZp667E155 (from clone DKFZp667E155)
          Length = 3742

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 287 ccccttgtcttggccctcttcatt 310
           |||||| |||||||||||||||||
Sbjct: 775 ccccttctcttggccctcttcatt 798
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>gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, complete sequence
          Length = 168864

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    aaccagatctttgcatccct 358
              ||||||||||||||||||||
Sbjct: 102652 aaccagatctttgcatccct 102633
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>gb|AC008695.9|AC008695 Homo sapiens chromosome 5 clone CTB-6P6, complete sequence
          Length = 152764

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    gctgctgcttcttgaagaag 418
              ||||||||||||||||||||
Sbjct: 143745 gctgctgcttcttgaagaag 143726
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 489     caataatttcaacaggcagc 508
               ||||||||||||||||||||
Sbjct: 2670905 caataatttcaacaggcagc 2670886
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 315      ggctgttgtggaaaggggat 334
                ||||||||||||||||||||
Sbjct: 11358736 ggctgttgtggaaaggggat 11358755
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 443      cttaacagatcctcaaggat 462
                ||||||||||||||||||||
Sbjct: 32864121 cttaacagatcctcaaggat 32864102
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>gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, complete sequence
          Length = 137009

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 287   ccccttgtcttggccctcttcatt 310
             |||||| |||||||||||||||||
Sbjct: 54987 ccccttctcttggccctcttcatt 54964
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>gb|AC106875.5| Homo sapiens BAC clone RP11-494G9 from 2, complete sequence
          Length = 59580

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   tttacccccttgtcttggcc 301
             ||||||||||||||||||||
Sbjct: 39757 tttacccccttgtcttggcc 39738
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>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0005J15, complete sequence
          Length = 159270

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   ggctgttgtggaaaggggat 334
             ||||||||||||||||||||
Sbjct: 70270 ggctgttgtggaaaggggat 70289
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>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413G02
          Length = 155633

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   cttaacagatcctcaaggat 462
             ||||||||||||||||||||
Sbjct: 85526 cttaacagatcctcaaggat 85507
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>dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUD21
          Length = 69850

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   accaaacctctccagtagca 121
             ||||||||||||||||||||
Sbjct: 16327 accaaacctctccagtagca 16346
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>gb|BT021753.1| Bos taurus olfactomedin-like 1 (OLFML1), mRNA, complete cds
          Length = 2084

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 399 gctgctgcttcttgaagaag 418
           ||||||||||||||||||||
Sbjct: 338 gctgctgcttcttgaagaag 319
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>gb|AC155268.1| Mus musculus BAC clone RP23-204K22 from 16, complete sequence
          Length = 218381

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     ataaccaaacctctccagta 118
              ||||||||||||||||||||
Sbjct: 149114 ataaccaaacctctccagta 149095
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>emb|AL845282.12| Zebrafish DNA sequence from clone DKEY-28P18 in linkage group 21,
              complete sequence
          Length = 192865

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    agcatcaataatttcaacag 503
              ||||||||||||||||||||
Sbjct: 166774 agcatcaataatttcaacag 166793
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>emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on chromosome 14, complete
              sequence
          Length = 174286

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 341    ccagatctttgcatcccttcttca 364
              ||||||||||| ||||||||||||
Sbjct: 120766 ccagatctttgtatcccttcttca 120789


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,408,704
Number of Sequences: 3902068
Number of extensions: 4408704
Number of successful extensions: 78262
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78079
Number of HSP's gapped (non-prelim): 183
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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