| Clone Name | rbasd13g11 |
|---|---|
| Clone Library Name | barley_pub |
>BCAT5_ARATH (Q9FYA6) Branched-chain-amino-acid aminotransferase 5, chloroplast| precursor (EC 2.6.1.42) (Atbcat-5) Length = 415 Score = 45.1 bits (105), Expect = 5e-05 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = -1 Query: 318 QQLYTSLTSLQMGQAEDSMGWTVQLN 241 +QLYTSLTSLQMG +ED+M WTVQL+ Sbjct: 390 KQLYTSLTSLQMGLSEDNMNWTVQLS 415
>BCAT3_ARATH (Q9M401) Branched-chain-amino-acid aminotransferase 3, chloroplast| precursor (EC 2.6.1.42) (Atbcat-3) Length = 413 Score = 39.3 bits (90), Expect = 0.003 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = -1 Query: 318 QQLYTSLTSLQMGQAEDSMGWTVQLN 241 +QLYT LTSLQMG ED+M WTV L+ Sbjct: 388 KQLYTVLTSLQMGLIEDNMKWTVNLS 413
>BCAT4_ARATH (Q9LE06) Probable branched-chain-amino-acid aminotransferase 4| (Atbcat-4) Length = 354 Score = 32.3 bits (72), Expect = 0.31 Identities = 11/25 (44%), Positives = 20/25 (80%) Frame = -1 Query: 315 QLYTSLTSLQMGQAEDSMGWTVQLN 241 +LY +L+ +Q G+ ED+ GWTV+++ Sbjct: 327 KLYETLSDIQTGRVEDTKGWTVEID 351
>ILVE_STAES (Q8CQ78) Probable branched-chain-amino-acid aminotransferase (EC| 2.6.1.42) (BCAT) Length = 358 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -1 Query: 318 QQLYTSLTSLQMGQAEDSMGWTVQL 244 Q+LY + T +Q G+ ED GW V++ Sbjct: 331 QKLYDTYTGIQSGKLEDKYGWRVEV 355
>ILVE_STAEQ (Q5HRJ8) Probable branched-chain-amino-acid aminotransferase (EC| 2.6.1.42) (BCAT) Length = 358 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -1 Query: 318 QQLYTSLTSLQMGQAEDSMGWTVQL 244 Q+LY + T +Q G+ ED GW V++ Sbjct: 331 QKLYDTYTGIQSGKLEDKYGWRVEV 355
>BBS1_HUMAN (Q8NFJ9) Bardet-Biedl syndrome 1 protein (BBS2-like protein 2)| Length = 593 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/58 (34%), Positives = 30/58 (51%) Frame = +1 Query: 139 AEPTTKLKIHKMF*SG*EHREPIGTTXIGKDCWLIQLHGPAHAVLRLAHLEACQRGVQ 312 A+P +++HK+ G G T GK W +Q+ PA A+L + LE RG+Q Sbjct: 290 AQPVGLIRVHKVLVVGSTQDSLHGFTHKGKKLWTVQM--PA-AILTMNLLEQHSRGLQ 344
>RP8L3_ARATH (Q9FJB5) Probable disease resistance RPP8-like protein 3| Length = 901 Score = 30.0 bits (66), Expect = 1.5 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = +2 Query: 29 HTGFGFPFHDKKKRRIRGEATHLMRPHLHMHTRTPLGQSLLQNSRYTRCFNQAENTANPL 208 H G P H + E +L P L MH +T L L N Y CF+ ++ L Sbjct: 624 HVAIGVPVHVPNVLKEMLELRYLSLP-LDMHDKTKLELGDLVNLEYLWCFSTQHSSVTDL 682 Query: 209 ARRX*AKIVG-*FS--CTVQPMLSS 274 R + G FS CT + + SS Sbjct: 683 LRMTKLRFFGVSFSERCTFENLSSS 707
>BCAT6_ARATH (Q9LPM9) Branched-chain-amino-acid aminotransferase 6 (EC 2.6.1.42)| (Atbcat-6) Length = 356 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -1 Query: 315 QLYTSLTSLQMGQAEDSMGWTVQLN 241 +L++ LT++QMG ED GW V ++ Sbjct: 328 KLHSMLTNIQMGVVEDKKGWMVDID 352
>BCAT7_ARATH (Q9LPM8) Putative branched-chain-amino-acid aminotransferase 7| (Atbcat-7) Length = 367 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = -1 Query: 315 QLYTSLTSLQMGQAEDSMGWTVQLN 241 +L+ LT++QMG ED GW ++++ Sbjct: 331 KLHLILTNIQMGVVEDKKGWMMEID 355
>VSAC_TRYBB (P06016) Variant surface glycoprotein ANTAT 1.1C precursor (VSG)| (Fragment) Length = 482 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = -3 Query: 292 PPDGPGGGQHGLDRAAELANNLCLSPSCQW 203 P GP G + D+ + + C SP+C+W Sbjct: 423 PKTGPTGTEATTDKCKDKTKDECKSPNCKW 452
>CIK1_YEAST (Q01649) Spindle pole body-associated protein| Length = 594 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 8/57 (14%) Frame = +2 Query: 59 KKKRRIRGEATHLMRPHLH--------MHTRTPLGQSLLQNSRYTRCFNQAENTANP 205 ++K+++ GEA + + +++ ++TR L S+ + YTRCF A P Sbjct: 334 EEKKQVEGEANNWKKKYVNELEKVQQELYTRQNLATSIEEIKGYTRCFAYANERQMP 390
>ILVE_BACSU (P39576) Putative branched-chain-amino-acid aminotransferase (EC| 2.6.1.42) (BCAT) (Vegetative protein 85) (VEG85) Length = 362 Score = 28.1 bits (61), Expect = 5.8 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = -1 Query: 318 QQLYTSLTSLQMGQAEDSMGWTVQL 244 ++LY ++T +Q G D GWT ++ Sbjct: 331 KKLYDTITGIQKGAVADEFGWTTEV 355
>L2MU_ADE02 (P14269) Late L2 mu core protein precursor (pMu) (Protein X) (pX)| (11 kDa core protein) Length = 79 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +1 Query: 34 RLRFPVPRQKKKAHTRRGHASY 99 RLRFPVP + + H RRG A + Sbjct: 5 RLRFPVPGFRGRMHRRRGMAGH 26
>FANCA_MOUSE (Q9JL70) Fanconi anemia group A protein homolog (Protein FACA)| Length = 1439 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -1 Query: 162 LEFCSRLCPSGVLVCICRWGRIRCVASP 79 L FC C + V C+C++ +R SP Sbjct: 829 LLFCMNFCTAAVSYCLCKFSALRNCLSP 856 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,051,810 Number of Sequences: 219361 Number of extensions: 910182 Number of successful extensions: 2279 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2238 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2279 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)