ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13g08 |
|---|---|
| Clone Library Name | barley_pub |
>MIB2_CHICK (Q5ZIJ9) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) Length = 954 Score = 54.3 bits (129), Expect = 4e-07 Identities = 28/84 (33%), Positives = 41/84 (48%) Frame = -1 Query: 662 KQRQHAATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGCGHQTC 483 K+ + +T S SSES+ E ++C IC+D L F CGH +C Sbjct: 870 KKLKRDSTEVECSPSSESTDQRKLMEELQNRYRQMEERITCPICIDDQIKLVFQCGHGSC 929 Query: 482 YDCGKNLVRCPMCQQHITTRIRLY 411 DC L CP+C+Q I RI+++ Sbjct: 930 PDCSTALTVCPICRQAIRERIQIF 953
>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb| protein) Length = 1030 Score = 53.9 bits (128), Expect = 5e-07 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = -1 Query: 542 CAICMDKSKDLAFGCGHQTCYDCGKNLVRCPMCQQHITTRIRLY 411 C +C+D+ K++ F CGH TC CG + CP+C++ I RI LY Sbjct: 987 CPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLY 1030 Score = 42.0 bits (97), Expect = 0.002 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = -1 Query: 623 YSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFG-CGH-QTCYDCGKNLVRCP 450 + ++S +R+P + ++E+ C +C D +D FG CGH TC C + +C Sbjct: 792 HKEKTSGQVGSRSPSL--NSNNETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCL 849 Query: 449 MCQQHITTRIRL 414 +C++ + +R ++ Sbjct: 850 ICKEQVQSRTKI 861
>MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) Length = 1011 Score = 53.9 bits (128), Expect = 5e-07 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = -1 Query: 542 CAICMDKSKDLAFGCGHQTCYDCGKNLVRCPMCQQHITTRIRLY 411 C +C+D+ K++ F CGH TC CG + CP+C++ I RI LY Sbjct: 964 CPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLY 1007 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 623 YSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFG-CGH-QTCYDCGKNLVRCP 450 + +SS + +P + + SE+ C +C D +D FG CGH TC C + +C Sbjct: 794 HKEKSSGQVGSHSP-SMINNDSETLEECMVCSDLKRDTLFGPCGHIATCSLCSPRVKKCL 852 Query: 449 MCQQHITTRIRL 414 +C++ + +R ++ Sbjct: 853 LCKEQVQSRTKI 864
>MIB2_HUMAN (Q96AX9) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) (Zinc finger ZZ type with ankyrin repeat domain protein 1) (Skeletrophin) (Novelzin) (Novel zinc finger protein) (Putative NF-kappa-B-activating protein 002N) Length = 1013 Score = 53.5 bits (127), Expect = 6e-07 Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 6/81 (7%) Frame = -1 Query: 635 RPDSYSSESSQPTATRTPDTYASE------SSESTLSCAICMDKSKDLAFGCGHQTCYDC 474 RPD S+ P A P E E ++C IC+D L F CGH C C Sbjct: 933 RPDGSEVASAAP-APGPPRQLVEELQSRYRQMEERITCPICIDSHIRLVFQCGHGACAPC 991 Query: 473 GKNLVRCPMCQQHITTRIRLY 411 G L CP+C+Q I RI+++ Sbjct: 992 GSALSACPICRQPIRDRIQIF 1012
>MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) Length = 1006 Score = 53.5 bits (127), Expect = 6e-07 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = -1 Query: 542 CAICMDKSKDLAFGCGHQTCYDCGKNLVRCPMCQQHITTRIRLY 411 C +C+D+ K++ F CGH TC CG + CP+C++ I RI LY Sbjct: 963 CPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006 Score = 43.1 bits (100), Expect = 8e-04 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 623 YSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFG-CGH-QTCYDCGKNLVRCP 450 + + S +R+P + S SE+ C +C D +D FG CGH TC C + +C Sbjct: 793 HKEKVSGQVGSRSP-SMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCL 851 Query: 449 MCQQHITTRIRL 414 +C++ + +R ++ Sbjct: 852 ICKEQVQSRTKI 863
>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2) Length = 1006 Score = 53.5 bits (127), Expect = 6e-07 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = -1 Query: 542 CAICMDKSKDLAFGCGHQTCYDCGKNLVRCPMCQQHITTRIRLY 411 C +C+D+ K++ F CGH TC CG + CP+C++ I RI LY Sbjct: 963 CPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006 Score = 43.1 bits (100), Expect = 8e-04 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = -1 Query: 623 YSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFG-CGH-QTCYDCGKNLVRCP 450 + + S +R+P + S SE+ C +C D +D FG CGH TC C + +C Sbjct: 793 HKEKVSGQVGSRSP-SMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCL 851 Query: 449 MCQQHITTRIRL 414 +C++ + +R ++ Sbjct: 852 ICKEQVQSRTKI 863
>MIB2_MOUSE (Q8R516) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) (Mind bomb-2) (Skeletrophin) (Dystrophin-like protein) (Dyslike) Length = 973 Score = 52.0 bits (123), Expect = 2e-06 Identities = 21/49 (42%), Positives = 29/49 (59%) Frame = -1 Query: 557 ESTLSCAICMDKSKDLAFGCGHQTCYDCGKNLVRCPMCQQHITTRIRLY 411 E ++C IC+D L F CGH C CG L CP+C+Q I RI+++ Sbjct: 924 EERITCPICIDSHIRLVFQCGHGACAPCGAALNACPICRQPIRDRIQIF 972
>MIB2_RAT (Q68LP1) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) (RBSC-skeletrophin/dystrophin-like polypeptide) Length = 971 Score = 52.0 bits (123), Expect = 2e-06 Identities = 21/49 (42%), Positives = 29/49 (59%) Frame = -1 Query: 557 ESTLSCAICMDKSKDLAFGCGHQTCYDCGKNLVRCPMCQQHITTRIRLY 411 E ++C IC+D L F CGH C CG L CP+C+Q I RI+++ Sbjct: 922 EERITCPICIDSHIRLVFQCGHGACAPCGAALNACPICRQPIRDRIQIF 970
>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb| homolog) (D-mib) Length = 1226 Score = 50.8 bits (120), Expect = 4e-06 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = -1 Query: 542 CAICMDKSKDLAFGCGHQTCYDCGKNLVRCPMCQQHITTRIRLY 411 C +C D+ K++ F CGH TC CG + CP+C++ + RI L+ Sbjct: 1183 CPVCFDRIKNMVFLCGHGTCQMCGDQIEGCPICRKTVEKRILLF 1226
>LRSM1_MOUSE (Q80ZI6) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich| repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase) Length = 727 Score = 46.2 bits (108), Expect = 1e-04 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%) Frame = -1 Query: 602 PTATRT------PDTYASESSESTLSCAICMDKSKDLAF-GCGHQTC-YDCGKNLVRCPM 447 PTA R P +E T C +C+++ + F CGH C C + L CP+ Sbjct: 653 PTAPRELQESVRPSAPPAELDMPTSECVVCLEREAQMVFLTCGHVCCCQQCCQPLRTCPL 712 Query: 446 CQQHITTRIRLY 411 C+Q I+ R+R+Y Sbjct: 713 CRQEISQRLRIY 724
>LRSM1_HUMAN (Q6UWE0) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich| repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase) (hTAL) Length = 723 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -1 Query: 605 QPTATRTPDTYASESSESTLSCAICMDKSKDLAF-GCGHQTC-YDCGKNLVRCPMCQQHI 432 +P + P +E C +C+++ + F CGH C C + L CP+C+Q I Sbjct: 654 EPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPLRTCPLCRQDI 713 Query: 431 TTRIRLY 411 R+R+Y Sbjct: 714 AQRLRIY 720
>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney| inhibitor of apoptosis protein) (KIAP) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (Livin) Length = 298 Score = 44.7 bits (104), Expect = 3e-04 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -1 Query: 545 SCAICMDKSKDLAF-GCGHQTCYDCGKNLVRCPMCQQHITTRIRLY 411 +C +C+D++ + F CGH C +C L CP+C+ + +R+R + Sbjct: 251 TCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTF 296
>RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein MOMO)| Length = 381 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 + E C ICMD D + CGH TC CGK + CP+C+Q++ + ++ Sbjct: 326 QDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 379
>RNF34_BOVIN (Q5E9J6) RING finger protein 34| Length = 375 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 + E C ICMD D + CGH TC CGK + CP+C+Q++ + ++ Sbjct: 320 QDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 373
>RNF34_PONPY (Q5NVC7) RING finger protein 34| Length = 372 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 + E C ICMD D + CGH TC CGK + CP+C+Q++ + ++ Sbjct: 317 QDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 370
>RNF34_MOUSE (Q99KR6) RING finger protein 34 (RING finger protein RIFF)| (Phafin-1) Length = 376 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 + E C ICMD D + CGH TC CGK + CP+C+Q++ + ++ Sbjct: 321 QDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 374
>RNF34_HUMAN (Q969K3) RING finger protein 34 (RING finger protein RIFF)| (FYVE-RING finger protein Momo) (Human RING finger homologous to inhibitor of apoptosis protein) (hRFI) (Caspases-8 and -10-associated RING finger protein 1) (CARP-1) (Caspase regulat Length = 372 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 + E C ICMD D + CGH TC CGK + CP+C+Q++ + ++ Sbjct: 317 QDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 370
>RFFL_RAT (Q8CIN9) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (FYVE-RING finger protein Sakura) Length = 362 Score = 43.9 bits (102), Expect = 5e-04 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = -1 Query: 542 CAICMDKSKD-LAFGCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 C ICMD D + CGH TC CGK + CP+C+Q++ + ++ Sbjct: 315 CKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVF 360
>RFFL_HUMAN (Q8WZ73) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (FYVE-RING finger protein Sakura) (Fring) (Caspases-8 and -10-associated RING finger protein 2) (CARP-2) (Caspase regulator CARP2) (RING finger protein 189) (RING finge Length = 363 Score = 43.9 bits (102), Expect = 5e-04 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = -1 Query: 542 CAICMDKSKD-LAFGCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 C ICMD D + CGH TC CGK + CP+C+Q++ + ++ Sbjct: 316 CKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVF 361
>RFFL_MOUSE (Q6ZQM0) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (Fring) Length = 377 Score = 43.9 bits (102), Expect = 5e-04 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = -1 Query: 542 CAICMDKSKD-LAFGCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 C ICMD D + CGH TC CGK + CP+C+Q++ + ++ Sbjct: 330 CKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVF 375
>BIRC8_GORGO (Q95M71) Baculoviral IAP repeat-containing protein 8 (Inhibitor of| apoptosis-like protein 2) (IAP-like protein 2) (ILP-2) Length = 236 Score = 42.4 bits (98), Expect = 0.001 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 4/99 (4%) Frame = -1 Query: 695 QTSGFQQSDSFKQRQHAATRRPDSYSSESSQPTATR--TPDTYASESSESTLSCAICMDK 522 QTSG + + D+ +ES+Q + R +P+ E L C ICMD+ Sbjct: 137 QTSGSNYKTLEVLVADLVSAQKDTTENESNQTSLQREISPEEPLRRLQEEKL-CKICMDR 195 Query: 521 SKDLAF-GCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 + F CGH TC C + + RCPMC I + R++ Sbjct: 196 HIAVVFIPCGHLVTCKQCAEAVDRCPMCNAVIDFKQRVF 234
>BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (HIAP1) (HIAP-1) (C-IAP2) (TNFR2-TRAF signaling complex protein 1) (IAP homolog C) (Apoptosis inhibitor 2) (API2) Length = 604 Score = 42.4 bits (98), Expect = 0.001 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = -1 Query: 545 SCAICMDKSKDLAF-GCGHQT-CYDCGKNLVRCPMCQQHITTRIRLY 411 +C +CMDK + F CGH C DC +L +CP+C+ I +R + Sbjct: 556 TCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTF 602
>BIRC4_HUMAN (P98170) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP-like protein) (HILP) Length = 497 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = -1 Query: 629 DSYSSESSQPTATRTPDTYAS-ESSESTLSCAICMDKSKDLAF-GCGHQ-TCYDCGKNLV 459 DS ESSQ + + T + C ICMD++ + F CGH TC C + + Sbjct: 420 DSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVD 479 Query: 458 RCPMCQQHITTRIRLY 411 +CPMC IT + +++ Sbjct: 480 KCPMCYTVITFKQKIF 495
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 18/109 (16%) Frame = -1 Query: 695 QTSGFQQSDSFKQRQHAATRRPDSYSSESSQPTA--TRTPDTYASESSEST--------- 549 +T+G Q + + + ++ P E +P + D AS+++ S Sbjct: 84 ETNGTDQEEMTEPTEQPDSKTPQKRKLEEPEPEPKKAKVEDKDASKTAASLGAAGDFAEE 143 Query: 548 LSCAICMDKSKD-LAFGCGHQTCYDC------GKNLVRCPMCQQHITTR 423 L+C +C++ KD + CGH C C G++ CP C++ IT R Sbjct: 144 LTCPLCVELFKDPVMVACGHNFCRSCIDKVWEGQSSFACPECKESITDR 192
>IAP1_DROME (Q24306) Apoptosis 1 inhibitor (Inhibitor of apoptosis 1) (dIAP1)| (Protein thread) Length = 438 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Frame = -1 Query: 605 QPTATRTPDTYASESSE--STLSCAICMDKSKDLAF-GCGHQT-CYDCGKNLVRCPMCQQ 438 + TA TP T +S S+ C IC + AF CGH C C ++ +CP+C++ Sbjct: 368 EATAVATPSTNSSGSTSIPEEKLCKICYGAEYNTAFLPCGHVVACAKCASSVTKCPLCRK 427 Query: 437 HITTRIRLY 411 T +R+Y Sbjct: 428 PFTDVMRVY 436
>PIAP_PIG (O62640) Putative inhibitor of apoptosis| Length = 358 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = -1 Query: 545 SCAICMDKSKDLAF-GCGHQT-CYDCGKNLVRCPMCQQHITTRIRLY 411 +C +CMDK + F CGH C DC +L +CP+C+ I +R + Sbjct: 310 TCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 356
>BIRC8_PANTR (Q95M72) Baculoviral IAP repeat-containing protein 8 (Inhibitor of| apoptosis-like protein 2) (IAP-like protein 2) (ILP-2) Length = 236 Score = 41.2 bits (95), Expect = 0.003 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 4/99 (4%) Frame = -1 Query: 695 QTSGFQQSDSFKQRQHAATRRPDSYSSESSQPTATR--TPDTYASESSESTLSCAICMDK 522 QTSG + + D+ +ES+Q + R +P+ + L C ICMD+ Sbjct: 137 QTSGSNYKTLEVLVADLVSAQKDTTENESNQTSLQREISPEEPLRRLQDEKL-CKICMDR 195 Query: 521 SKDLAF-GCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 + F CGH TC C + + RCPMC I + R++ Sbjct: 196 HIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVF 234
>BIRC4_MOUSE (Q60989) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP homolog A) (MIAP3) (MIAP-3) Length = 496 Score = 40.8 bits (94), Expect = 0.004 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = -1 Query: 629 DSYSSESSQPTATRTPDTYAS-ESSESTLSCAICMDKSKDLAF-GCGHQ-TCYDCGKNLV 459 D+ ESSQ + + T + C ICMD++ + F CGH TC C + + Sbjct: 419 DNTEDESSQTSLQKDISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVD 478 Query: 458 RCPMCQQHITTRIRLY 411 +CPMC IT + +++ Sbjct: 479 KCPMCYTVITFKQKIF 494
>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)| Length = 943 Score = 40.4 bits (93), Expect = 0.005 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -1 Query: 545 SCAICMDKSKDLAF-GCGHQT-CYDCGKNLVRCPMCQQHITTRIRLY 411 SC IC ++ C H + C DC L +CP+C+ HI +I +Y Sbjct: 896 SCVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPICRSHIENKISIY 942
>BIRC4_RAT (Q9R0I6) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP homolog A) (RIAP3) (RIAP-3) Length = 496 Score = 40.0 bits (92), Expect = 0.007 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = -1 Query: 629 DSYSSESSQPTATRTPDTYAS-ESSESTLSCAICMDKSKDLAF-GCGHQ-TCYDCGKNLV 459 D+ ESSQ + + T + C ICMD++ + F CGH TC C + + Sbjct: 419 DNSQDESSQTSLQKDISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVD 478 Query: 458 RCPMCQQHITTRIRLY 411 +CPMC IT + +++ Sbjct: 479 KCPMCCTVITFKQKIF 494
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 40.0 bits (92), Expect = 0.007 Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 12/81 (14%) Frame = -1 Query: 635 RPDSYSSESSQPTATRTPDTYASESSE-------STLSCAICMDKSKDLAF-GCGHQTCY 480 +PD +S + D S SE L C ICM KD CGH CY Sbjct: 14 KPDPRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAFLTACGHSFCY 73 Query: 479 DCG----KNLVRCPMCQQHIT 429 C +N CP C QH+T Sbjct: 74 MCIITHLRNKSDCPCCSQHLT 94
>BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (MIAP1) (MIAP-1) Length = 600 Score = 40.0 bits (92), Expect = 0.007 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -1 Query: 542 CAICMDKSKDLAF-GCGHQT-CYDCGKNLVRCPMCQQHITTRIRLY 411 C +CMD+ + F CGH C DC +L +CP+C+ I +R + Sbjct: 553 CKVCMDREVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 598
>ZFP_IRV6 (P47732) Zinc finger protein| Length = 208 Score = 40.0 bits (92), Expect = 0.007 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -1 Query: 581 DTYASESSESTLSCAICM-DKSKDLAFGCGHQTCYDCGKNLVRCPMCQQH 435 D ++ S L+C IC +K + CGH +CY+C L CP+C+ + Sbjct: 150 DQNSTTSDCDVLTCKICFTNKITKVLIPCGHSSCYECVFKLQTCPICKNN 199
>BIRC8_HUMAN (Q96P09) Baculoviral IAP repeat-containing protein 8 (Inhibitor of| apoptosis-like protein 2) (IAP-like protein 2) (ILP-2) (Testis-specific inhibitor of apoptosis) Length = 236 Score = 39.7 bits (91), Expect = 0.009 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = -1 Query: 695 QTSGFQQSDSFKQRQHAATRRPDSYSSESSQPTATR--TPDTYASESSESTLSCAICMDK 522 QTSG + + D+ +E +Q + R +P+ E L C ICMD+ Sbjct: 137 QTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKL-CKICMDR 195 Query: 521 SKDLAF-GCGHQ-TCYDCGKNLVRCPMCQQHITTRIRLY 411 + F CGH TC C + + RCPMC I + R++ Sbjct: 196 YIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVF 234
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 39.7 bits (91), Expect = 0.009 Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 14/83 (16%) Frame = -1 Query: 638 RRPDSYSSESSQPTATRTPDTYASESSESTLSCAIC----MDKSKDLAFGCGHQTCYDC- 474 R +S+S E R Y S +L C+IC MD K L CGH C C Sbjct: 882 RFDNSFSKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFTECGHSFCEKCL 941 Query: 473 --------GKNL-VRCPMCQQHI 432 KNL ++CP C+ I Sbjct: 942 FEYIEFQNSKNLGLKCPNCRNQI 964
>IAP2_DROME (Q24307) Apoptosis 2 inhibitor (Inhibitor of apoptosis 2) (dIAP2)| (DIAP) (IAP homolog A) (IAP-like protein) (DILP) Length = 498 Score = 38.5 bits (88), Expect = 0.020 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = -1 Query: 542 CAICMDKSKDLAF-GCGH-QTCYDCGKNLVRCPMCQQHITTRIRLY 411 C +C+D+ + F CGH TC C ++ CPMC+ I +R + Sbjct: 451 CKVCLDEEVGVVFLPCGHLATCNQCAPSVANCPMCRADIKGFVRTF 496
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 37.7 bits (86), Expect = 0.034 Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 9/99 (9%) Frame = -1 Query: 692 TSGFQQSDS-FKQRQHAATRRPDSYSSESSQPTATRTPDTY-ASESSESTLSCAICMDKS 519 T +Q DS Q++ P+ ++ + A++ + A+ L+C +C++ Sbjct: 93 TDTAEQPDSKTPQKRKIEEPEPEPKKAKVEEKDASKNASSLGAAGDFAEELTCPLCVELF 152 Query: 518 KD-LAFGCGHQTCYDC------GKNLVRCPMCQQHITTR 423 KD + CGH C C G++ CP C++ IT R Sbjct: 153 KDPVMVACGHNFCRSCIDKAWEGQSSFACPECRESITDR 191
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 37.4 bits (85), Expect = 0.045 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 1/95 (1%) Frame = -1 Query: 695 QTSGFQQSDSFKQRQHA-ATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKS 519 Q G S + K+ + AT + S+ S P +++ P T E C C + Sbjct: 1173 QEGGASSSQAEKELTDSPATSKRISFPGSSESPLSSKRPKTAEEIKPEQMYQCPYCKYSN 1232 Query: 518 KDLAFGCGHQTCYDCGKNLVRCPMCQQHITTRIRL 414 D+ H + ++RCP+CQ + +I L Sbjct: 1233 ADVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHL 1267
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 37.4 bits (85), Expect = 0.045 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLVR-------CPMCQQHI 432 + L C IC++ K+ L CGH C DC NL + CP+C+Q + Sbjct: 11 QDQLQCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSV 60
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 37.0 bits (84), Expect = 0.058 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%) Frame = -1 Query: 629 DSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAF--GCGHQTCYDC----GK 468 D++S ++ +T AS S+ C IC+D+ ++++ C H+ C+ C K Sbjct: 79 DNFSPKAGTSKLQQTVPADASPDSK----CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK 134 Query: 467 NLVRCPMCQQ 438 N CP+C+Q Sbjct: 135 NKAECPLCKQ 144
>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)| Length = 250 Score = 37.0 bits (84), Expect = 0.058 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 8/48 (16%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNL-------VRCPMCQQ 438 E L C IC++ K+ L CGH C C +L VRCPMC Q Sbjct: 11 EDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQ 58
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 37.0 bits (84), Expect = 0.058 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%) Frame = -1 Query: 629 DSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAF--GCGHQTCYDC----GK 468 D++S ++ +T AS S+ C IC+D+ ++++ C H+ C+ C K Sbjct: 78 DNFSPKAGTSKLQQTVPADASPDSK----CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK 133 Query: 467 NLVRCPMCQQ 438 N CP+C+Q Sbjct: 134 NKAECPLCKQ 143
>TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite motif protein 50C)| Length = 250 Score = 36.6 bits (83), Expect = 0.076 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 8/48 (16%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNL-------VRCPMCQQ 438 E L C IC++ K+ L CGH C C +L VRCPMC Q Sbjct: 11 EDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQ 58
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 36.2 bits (82), Expect = 0.099 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNL-------VRCPMCQQHI 432 E L C +C++ K+ L CGH C C +L +RCP+C+Q + Sbjct: 11 EDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEV 60
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 36.2 bits (82), Expect = 0.099 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Frame = -1 Query: 701 GQQTSGFQQSDSFKQRQHA-ATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMD 525 GQ S + K+ + AT + S+ S P +++ P E C C Sbjct: 1181 GQSKRAASSSQAEKELTDSPATTKRTSFPGSSETPLSSKRPKASEEIKPEQMYQCPYCKY 1240 Query: 524 KSKDLAFGCGHQTCYDCGKNLVRCPMCQQHITTRIRL 414 + D+ H + L+RCP+CQ + +I L Sbjct: 1241 SNADVNRLRVHAMTQHSVQPLLRCPLCQDMLNNKIHL 1277
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 36.2 bits (82), Expect = 0.099 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 8/71 (11%) Frame = -1 Query: 620 SSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFG-CGHQTCYDC-------GKN 465 +SE+ P+ T + ES+ C IC+D +KD CGH C+ C N Sbjct: 2 ASETKAPSEEPTSSSNKDESAR--FECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPN 59 Query: 464 LVRCPMCQQHI 432 CP+C+ I Sbjct: 60 NQVCPVCKSAI 70
>RC3H1_XENLA (Q6NUC6) Roquin (RING finger and C3H zinc finger protein 1)| Length = 1114 Score = 36.2 bits (82), Expect = 0.099 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 7/62 (11%) Frame = -1 Query: 548 LSCAICMDK-----SKDLAFGCGHQTCYDCGKNLVR--CPMCQQHITTRIRLY*LKADLL 390 LSC IC K ++ GCGH C C L R CP Q I T I L + + LL Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALL 71 Query: 389 MI 384 + Sbjct: 72 QL 73
>RC3H1_HUMAN (Q5TC82) Roquin (RING finger and C3H zinc finger protein 1)| Length = 1133 Score = 36.2 bits (82), Expect = 0.099 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 7/62 (11%) Frame = -1 Query: 548 LSCAICMDK-----SKDLAFGCGHQTCYDCGKNLVR--CPMCQQHITTRIRLY*LKADLL 390 LSC IC K ++ GCGH C C L R CP Q I T I L + + LL Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALL 71 Query: 389 MI 384 + Sbjct: 72 QL 73
>RC3H1_MOUSE (Q4VGL6) Roquin (RING finger and C3H zinc finger protein 1)| (Sanroque protein) Length = 1130 Score = 36.2 bits (82), Expect = 0.099 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 7/62 (11%) Frame = -1 Query: 548 LSCAICMDK-----SKDLAFGCGHQTCYDCGKNLVR--CPMCQQHITTRIRLY*LKADLL 390 LSC IC K ++ GCGH C C L R CP Q I T I L + + LL Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALL 71 Query: 389 MI 384 + Sbjct: 72 QL 73
>IAP3_NPVOP (P41437) Apoptosis inhibitor 3 (IAP-3)| Length = 268 Score = 35.8 bits (81), Expect = 0.13 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = -1 Query: 542 CAICMDKSKDLAF-GCGHQT-CYDCGKNLVRCPMCQQHITTRIRLY 411 C IC+ K + F CGH C C + CP+C+ + +R+Y Sbjct: 221 CKICLGAEKTVCFVPCGHVVACGKCAAGVTTCPVCRGQLDKAVRMY 266
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 35.8 bits (81), Expect = 0.13 Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 4/79 (5%) Frame = -1 Query: 653 QHAATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGCGHQTCYDC 474 Q + + PD SS + A+ + E C ICMD DL C H C C Sbjct: 120 QSSTSEEPDENSSSVTSCQASLWMGRVKQLTDEE--ECCICMDGRADLILPCAHSFCQKC 177 Query: 473 ----GKNLVRCPMCQQHIT 429 CP+C+ +T Sbjct: 178 IDKWSDRHRNCPICRLQMT 196
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 35.8 bits (81), Expect = 0.13 Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 4/79 (5%) Frame = -1 Query: 653 QHAATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGCGHQTCYDC 474 Q + + PD SS + A+ + E C ICMD DL C H C C Sbjct: 120 QSSTSEEPDENSSSVTSCQASLWMGRVKQLTDEE--ECCICMDGRADLILPCAHSFCQKC 177 Query: 473 ----GKNLVRCPMCQQHIT 429 CP+C+ +T Sbjct: 178 IDKWSDRHRNCPICRLQMT 196
>TRI18_RAT (P82458) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 35.4 bits (80), Expect = 0.17 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 17/63 (26%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQTCYDCGK----------------NLVRCPMCQQ 438 E+ ES L+C IC++ +D L C H C++C N +CP C+ Sbjct: 2 ETLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCRH 61 Query: 437 HIT 429 IT Sbjct: 62 VIT 64
>TRI18_MUSSP (P82457) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 35.4 bits (80), Expect = 0.17 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 17/63 (26%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQTCYDCGK----------------NLVRCPMCQQ 438 E+ ES L+C IC++ +D L C H C++C N +CP C+ Sbjct: 2 ETLESELTCPICLELLEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCRH 61 Query: 437 HIT 429 IT Sbjct: 62 VIT 64
>L100_ADEGX (P36856) Late 100 kDa protein| Length = 798 Score = 35.4 bits (80), Expect = 0.17 Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Frame = -1 Query: 689 SGFQQSDSFKQRQ-HAATRRPDSYSSESSQPTATRTPDTYASESS-ESTLSCAICMDKSK 516 SG+ +D + + RPD+ + ESS PT TP T SS ES+ C S Sbjct: 61 SGYYSADGGRDAECDGEAARPDTPTDESSAPT---TPSTAVRRSSGESSPDRGGCFSHSS 117 Query: 515 DLAFGCGHQTCYDCGKNLVRCPMCQQHITT 426 D GC +T L +C Q I T Sbjct: 118 DSELGCATETRDPFAAGLRKCIERQAMILT 147
>IAP_GVCP (P41436) Apoptosis inhibitor IAP| Length = 275 Score = 35.4 bits (80), Expect = 0.17 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Frame = -1 Query: 611 SSQPTATRTPDTYASESS--ESTLSCAICMDKSKDLAF-GCGHQT-CYDCGKNLVRCPMC 444 ++ P + P+T + E + C IC + + F CGH C C ++ +CPMC Sbjct: 203 TAAPVSEPIPETKIEKEPQVEDSKLCKICYVEECIVCFVPCGHVVACAKCALSVDKCPMC 262 Query: 443 QQHITTRIRLY 411 ++ +T+ +++Y Sbjct: 263 RKIVTSVLKVY 273
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Xsiah-2) Length = 313 Score = 35.4 bits (80), Expect = 0.17 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 4/72 (5%) Frame = -1 Query: 620 SSESSQPTATRTPDTYASESSEST--LSCAICMDKSKDLAFGC--GHQTCYDCGKNLVRC 453 +S PTA + + E T C +C D C GH C C + L C Sbjct: 41 ASAPPAPTAAAITGPLSQQHQELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCC 100 Query: 452 PMCQQHITTRIR 417 P C+ +T IR Sbjct: 101 PTCRASLTPSIR 112
>TRI18_MOUSE (O70583) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Midin) Length = 680 Score = 35.4 bits (80), Expect = 0.17 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 17/63 (26%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQTCYDCGK----------------NLVRCPMCQQ 438 E+ ES L+C IC++ +D L C H C++C N +CP C+ Sbjct: 2 ETLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCRH 61 Query: 437 HIT 429 IT Sbjct: 62 VIT 64
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 35.4 bits (80), Expect = 0.17 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 10/97 (10%) Frame = -1 Query: 698 QQTSGFQQSDSFKQRQHAATR---RPDSYSSESSQ-PTATRTPDTYASESSESTLSCAIC 531 + T+G + + ++ A + R D SSE + T ++ T E + + C++C Sbjct: 599 KDTAGRELKEKAIDKEQEAEKLKVRLDKVSSERDKWKTKCQSNSTEEEEMLRNLVLCSVC 658 Query: 530 MDKSKDLAF-GCGHQTCYDCGKN-----LVRCPMCQQ 438 K+ GCGH C +C N + +CP C + Sbjct: 659 RSNFKNTILKGCGHVFCNECVDNRLANRMRKCPSCNK 695
>TRI18_HUMAN (O15344) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Putative transcription factor XPRF) (Midin) (RING finger protein 59) (Midline 1 RING finger protein) Length = 667 Score = 35.0 bits (79), Expect = 0.22 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 17/63 (26%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV----------------RCPMCQQ 438 E+ ES L+C IC++ +D L C H C++C ++ +CP C+ Sbjct: 2 ETLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCRH 61 Query: 437 HIT 429 IT Sbjct: 62 VIT 64
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 35.0 bits (79), Expect = 0.22 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%) Frame = -1 Query: 542 CAICMDKSKDLAFGCGHQTCYDC----GKNLVRCPMCQQHIT 429 C ICMD DL C H C C CP+C++ +T Sbjct: 155 CCICMDGRVDLILPCAHSFCQKCIDKWSDRHRSCPVCRRQVT 196
>SINA_DROVI (P29304) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 34.7 bits (78), Expect = 0.29 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 2/69 (2%) Frame = -1 Query: 641 TRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGC--GHQTCYDCGK 468 T ++ SS SS ++ D S S C +C D C GH C C Sbjct: 40 TSSANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRS 99 Query: 467 NLVRCPMCQ 441 L CP C+ Sbjct: 100 KLTCCPTCR 108
>SINA_DROME (P21461) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 34.7 bits (78), Expect = 0.29 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 2/69 (2%) Frame = -1 Query: 641 TRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGC--GHQTCYDCGK 468 T ++ SS SS ++ D S S C +C D C GH C C Sbjct: 40 TSSANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRS 99 Query: 467 NLVRCPMCQ 441 L CP C+ Sbjct: 100 KLTCCPTCR 108
>SINA_DROER (P61093) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 34.7 bits (78), Expect = 0.29 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 2/69 (2%) Frame = -1 Query: 641 TRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGC--GHQTCYDCGK 468 T ++ SS SS ++ D S S C +C D C GH C C Sbjct: 40 TSSANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRS 99 Query: 467 NLVRCPMCQ 441 L CP C+ Sbjct: 100 KLTCCPTCR 108
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 34.7 bits (78), Expect = 0.29 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%) Frame = -1 Query: 542 CAICMDKSKDLAFGCGHQTCYDC----GKNLVRCPMCQQHIT 429 C ICMD DL C H C C CP+C+ +T Sbjct: 147 CCICMDGKADLILPCAHSFCQKCIDKWSGQSRNCPVCRIQVT 188
>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 331 Score = 34.7 bits (78), Expect = 0.29 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 2/69 (2%) Frame = -1 Query: 641 TRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGC--GHQTCYDCGK 468 T ++ SS SS ++ D S S C +C D C GH C C Sbjct: 57 TSSANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRS 116 Query: 467 NLVRCPMCQ 441 L CP C+ Sbjct: 117 KLTCCPTCR 125
>SINA_SCHMA (Q86MW9) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| homolog) (SmSINA) Length = 371 Score = 34.3 bits (77), Expect = 0.38 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Frame = -1 Query: 632 PDSYSSESSQPTATRTPDTYASESSE--STLSCAICMDKSKDLAFGC--GHQTCYDCGKN 465 P S SS S +T S S + S C +CMD + C GH C C Sbjct: 94 PGSMSSASDTVCNILPHNTSDSSSIDLASLFECPVCMDYALPPIMQCQSGHIVCASCRSK 153 Query: 464 LVRCPMCQQHI 432 L CP C+ ++ Sbjct: 154 LSSCPTCRGNL 164
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 33.9 bits (76), Expect = 0.49 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Frame = -1 Query: 611 SSQPTATRTPDTYASE--SSESTLSCAICMDKSKDLAFG-CGHQTCYDCGK-----NLVR 456 SS T D+ A E + + + C++C K++A CGH C DC K + + Sbjct: 616 SSLATTNLDEDSMAEELENFRTLVYCSLCSKNWKNMAIRTCGHVFCEDCCKERLAARMRK 675 Query: 455 CPMCQQHITTRIRLY*LKADLLMI 384 CP C + ++ DLLM+ Sbjct: 676 CPTCNKPFSSN--------DLLMV 691
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 33.9 bits (76), Expect = 0.49 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Frame = -1 Query: 644 ATRRPDSYSSESSQPTATRTPDTYASESS-ESTLSCAICMDKSKDLAF-GCGHQTCYDC- 474 A +P+ + S+ TA T + S + C ICM KD CGH CY C Sbjct: 12 AVVKPEPSKNFSTDTTAAGTFLLVPTMSDLDKDFLCPICMQIIKDAFLTACGHSFCYMCI 71 Query: 473 ---GKNLVRCPMCQQHIT 429 +N CP C ++T Sbjct: 72 ITHLRNKSDCPCCGHYLT 89
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 33.9 bits (76), Expect = 0.49 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 17/83 (20%) Frame = -1 Query: 629 DSYSSESSQPTATRTPDTYASESS-----ESTLSCAICMDKSKDL--------AFGCGHQ 489 + S + T TP + E + T+SC ICMD ++ + CGH Sbjct: 102 EELSKDKDVYVTTHTPRSTKDEGTTGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHV 161 Query: 488 TCYDC----GKNLVRCPMCQQHI 432 C C KN CP C++ I Sbjct: 162 FCSQCLRDSLKNANTCPTCRKKI 184
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 33.9 bits (76), Expect = 0.49 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%) Frame = -1 Query: 542 CAICMDKSKDLAFGCGHQTCYDC----GKNLVRCPMCQQHIT 429 C ICMD DL C H C C CP+C+ +T Sbjct: 155 CCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMT 196
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 33.9 bits (76), Expect = 0.49 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%) Frame = -1 Query: 542 CAICMDKSKDLAFGCGHQTCYDC----GKNLVRCPMCQQHIT 429 C ICMD DL C H C C CP+C+ +T Sbjct: 155 CCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMT 196
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 33.9 bits (76), Expect = 0.49 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 9/65 (13%) Frame = -1 Query: 608 SQPTATRTPD-TYASESSESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNL-------VR 456 S+P ++R D E E L+C IC+D+ K C H CY C ++ ++ Sbjct: 20 SRPPSSRPADFVNPLEKIEQLLTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLK 79 Query: 455 CPMCQ 441 CP C+ Sbjct: 80 CPECR 84
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 33.9 bits (76), Expect = 0.49 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%) Frame = -1 Query: 557 ESTLSCAIC-MDKSKDLAFGCGHQTCYDC----GKNLVRCPMCQQH 435 E++ C +C M+ S CGH C+ C K CP+C+QH Sbjct: 281 EASRKCILCLMNMSDPSCAPCGHLFCWSCLMSWCKERPECPLCRQH 326
>SIA1B_MOUSE (Q06985) Ubiquitin ligase SIAH1B (EC 6.3.2.-) (Seven in absentia| homolog 1b) (Siah1b) (Siah-1b) Length = 282 Score = 33.9 bits (76), Expect = 0.49 Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 2/74 (2%) Frame = -1 Query: 656 RQHAATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGC--GHQTC 483 RQ A + SQ T T ++ S C +C D C GH C Sbjct: 3 RQAATALSTGTSKCPPSQRVPALTDTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVC 62 Query: 482 YDCGKNLVRCPMCQ 441 +C L CP C+ Sbjct: 63 SNCRPKLTCCPTCR 76
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 33.5 bits (75), Expect = 0.64 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 8/53 (15%) Frame = -1 Query: 563 SSESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNL-------VRCPMCQQHIT 429 S E ++C+IC+D +D + CGH C C ++ CP+C++ T Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFT 61
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 33.5 bits (75), Expect = 0.64 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 12/55 (21%) Frame = -1 Query: 551 TLSCAICMDKSKDLAFGCGHQTCYDC------------GKNLVRCPMCQQHITTR 423 T C+IC++ A CGH C+ C + RCP C+ R Sbjct: 252 TFQCSICLENKNPSALFCGHLFCWTCIQEHAVAATSSASTSSARCPQCRLEFQPR 306
>SIAH1_BRARE (Q7ZVG6) Ubiquitin ligase Siah1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) Length = 282 Score = 33.5 bits (75), Expect = 0.64 Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 2/74 (2%) Frame = -1 Query: 656 RQHAATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGC--GHQTC 483 RQ A + SQ T + T ++ S C +C D C GH C Sbjct: 3 RQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVC 62 Query: 482 YDCGKNLVRCPMCQ 441 +C L CP C+ Sbjct: 63 SNCRPKLTCCPTCR 76
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 33.1 bits (74), Expect = 0.84 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 8/50 (16%) Frame = -1 Query: 563 SSESTLSCAICMDKSKD-LAFGCGHQTCYDC-------GKNLVRCPMCQQ 438 S E ++C+IC+D +D + CGH C C N CP+C++ Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKK 58
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 33.1 bits (74), Expect = 0.84 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 8/50 (16%) Frame = -1 Query: 563 SSESTLSCAICMDKSKD-LAFGCGHQTCYDC-------GKNLVRCPMCQQ 438 S E ++C+IC+D +D + CGH C C N CP+C++ Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKK 58
>SINAL_DROME (Q8T3Y0) Probable ubiquitin ligase sina-like protein CG13030 (EC| 6.3.2.-) Length = 351 Score = 33.1 bits (74), Expect = 0.84 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Frame = -1 Query: 680 QQSDSFKQRQHAATRRPDSYSSESSQPTATRTPDTYASESSE----STLSCAICMDKSKD 513 Q D+ + +RR DS + +S AT DT S + + + L C +C Sbjct: 57 QSPDAAAAGELVPSRRKDSVAVQSGI-VATGPLDTTRSGARDDFLMALLECPVCFGYIMP 115 Query: 512 LAFGC--GHQTCYDCGKNLVRCPMCQQHIT 429 C GH C C L CP+C+ +T Sbjct: 116 PIMQCPRGHLICSTCRSKLTICPVCRVFMT 145
>TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| (Midin-2) (RING finger protein 60) Length = 715 Score = 33.1 bits (74), Expect = 0.84 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 17/67 (25%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV----------------RCPMCQQ 438 E+ ES L+C IC++ +D L C H C+ C ++ +CP C+ Sbjct: 2 ETLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQCPTCRY 61 Query: 437 HITTRIR 417 I+ R Sbjct: 62 VISLNHR 68
>ZNFX1_HUMAN (Q9P2E3) NFX1-type zinc finger-containing protein 1| Length = 1918 Score = 33.1 bits (74), Expect = 0.84 Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Frame = -1 Query: 614 ESSQPTATRTPDTYASESSESTLSCAI-----CMDKSKDLAFGCGHQTCYDCGKNLVRCP 450 + QP + P T E + C++ C + + CGH+ + CG++ V+ Sbjct: 1339 QECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLRCGHRCSHPCGEDCVQ-- 1396 Query: 449 MCQQHITTRIR 417 +C + +T +++ Sbjct: 1397 LCSEMVTIKLK 1407
>TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| Length = 685 Score = 33.1 bits (74), Expect = 0.84 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 17/67 (25%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV----------------RCPMCQQ 438 E+ ES L+C IC++ +D L C H C+ C ++ +CP C+ Sbjct: 2 ETLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQCPTCRY 61 Query: 437 HITTRIR 417 I+ R Sbjct: 62 VISLNHR 68
>SIAH1_RAT (Q920M9) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) (Siah-1a) Length = 282 Score = 33.1 bits (74), Expect = 0.84 Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 2/74 (2%) Frame = -1 Query: 656 RQHAATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGC--GHQTC 483 RQ A + SQ T T ++ S C +C D C GH C Sbjct: 3 RQTATALPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVC 62 Query: 482 YDCGKNLVRCPMCQ 441 +C L CP C+ Sbjct: 63 SNCRPKLTCCPTCR 76
>SIAH1_HUMAN (Q8IUQ4) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) (Siah-1a) Length = 282 Score = 33.1 bits (74), Expect = 0.84 Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 2/74 (2%) Frame = -1 Query: 656 RQHAATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGC--GHQTC 483 RQ A + SQ T T ++ S C +C D C GH C Sbjct: 3 RQTATALPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVC 62 Query: 482 YDCGKNLVRCPMCQ 441 +C L CP C+ Sbjct: 63 SNCRPKLTCCPTCR 76
>SIA1A_MOUSE (P61092) Ubiquitin ligase SIAH1A (EC 6.3.2.-) (Seven in absentia| homolog 1a) (Siah1a) (Siah-1a) (mSiah-1a) Length = 282 Score = 33.1 bits (74), Expect = 0.84 Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 2/74 (2%) Frame = -1 Query: 656 RQHAATRRPDSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGC--GHQTC 483 RQ A + SQ T T ++ S C +C D C GH C Sbjct: 3 RQTATALPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVC 62 Query: 482 YDCGKNLVRCPMCQ 441 +C L CP C+ Sbjct: 63 SNCRPKLTCCPTCR 76
>SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) Length = 325 Score = 32.7 bits (73), Expect = 1.1 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = -1 Query: 554 STLSCAICMDKSKDLAFGC--GHQTCYDCGKNLVRCPMCQQHITTRIR 417 S C +C D C GH C C + L CP C+ +T IR Sbjct: 77 SLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIR 124
>SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) (mSiah2) Length = 325 Score = 32.7 bits (73), Expect = 1.1 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = -1 Query: 554 STLSCAICMDKSKDLAFGC--GHQTCYDCGKNLVRCPMCQQHITTRIR 417 S C +C D C GH C C + L CP C+ +T IR Sbjct: 77 SLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIR 124
>SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) (hSiah2) Length = 324 Score = 32.7 bits (73), Expect = 1.1 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = -1 Query: 554 STLSCAICMDKSKDLAFGC--GHQTCYDCGKNLVRCPMCQQHITTRIR 417 S C +C D C GH C C + L CP C+ +T IR Sbjct: 76 SLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIR 123
>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1| Length = 485 Score = 32.7 bits (73), Expect = 1.1 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Frame = -1 Query: 689 SGFQQSDSFKQRQHAATRRP-DSYSSESSQPTATRTPDTYASESSESTLSCAICMDKSKD 513 + F + S AA P DS +SE+S R P + AS + C +C + Sbjct: 390 AAFSTATSLPSSPAAAACAPLDSGASENS-----RKPPS-ASSAPALARECVVCAEGEVM 443 Query: 512 LAF-GCGHQT-CYDC-----GKNLVRCPMCQQHITTRIRLY 411 A CGH C DC GK+ CP C+ T I ++ Sbjct: 444 AALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIF 484
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 17/71 (23%) Frame = -1 Query: 593 TRTPDTYASESS-----ESTLSCAICMDKSKDL--------AFGCGHQTCYDC----GKN 465 T TP E + T+SC ICMD ++ + CGH C C KN Sbjct: 110 THTPRNARDEGATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN 169 Query: 464 LVRCPMCQQHI 432 CP C++ I Sbjct: 170 ANTCPTCRKKI 180
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 9/59 (15%) Frame = -1 Query: 590 RTPDTYA--SESSESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNL------VRCPMCQ 441 R+PD S S + L CA+C D +D + CGH C C CP+C+ Sbjct: 3 RSPDVSPGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCK 61
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 17/83 (20%) Frame = -1 Query: 629 DSYSSESSQPTATRTPDTYASESS-----ESTLSCAICMDKSKDL--------AFGCGHQ 489 + S + T TP + + + T+SC ICMD ++ + CGH Sbjct: 102 EELSRDKDVYVTTHTPRSTKDDGATGPRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHV 161 Query: 488 TCYDC----GKNLVRCPMCQQHI 432 C C KN CP C++ I Sbjct: 162 FCSQCLRDSLKNANTCPTCRKKI 184
>ZNFP_LYCVA (P18541) RING finger protein Z| Length = 89 Score = 32.0 bits (71), Expect = 1.9 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Frame = -1 Query: 620 SSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGCGHQTCYDCGKNLV----RC 453 S E +T + + LSC C K L H C C L+ RC Sbjct: 5 SREEKGTNSTNRAEILPDTTYLGPLSCKSCWQKFDSLVRCHDHYLCRHCLNLLLSVSDRC 64 Query: 452 PMCQQHITTRIRL 414 P+C+ + TR+++ Sbjct: 65 PLCKYPLPTRLKI 77
>MYLIP_MOUSE (Q8BM54) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 32.0 bits (71), Expect = 1.9 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = -1 Query: 620 SSESSQPTATRTPDTYASESSESTLSCAICMDKSKDLAFGCGHQTCYD-CGKNLVRCPMC 444 S E TR + E+ L A C ++ CGH C + C L CP+C Sbjct: 362 SCEGLSCQQTRVLQEKLRKLKEAMLCMACCEEEINSTFCPCGHTVCCESCAAQLQSCPVC 421 Query: 443 QQHI 432 + + Sbjct: 422 RSRV 425
>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived| apoptosis-inducing RBCC protein) (MAIR protein) (Nc8 protein) (Hemopoeitic lineage switch protein 5) Length = 501 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Frame = -1 Query: 569 SESSESTLSCAICMDKSKD-LAFGCGHQTCYDC------GKNLVRCPMCQQ 438 S S + L CA+C D +D + CGH C C + CP+C++ Sbjct: 12 SRSFKEELLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCPVCKE 62
>IAP1_NPVAC (P41435) Apoptosis inhibitor 1 (IAP-1)| Length = 286 Score = 32.0 bits (71), Expect = 1.9 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = -1 Query: 569 SESSESTLSCAICMDKSKD-LAFGCGHQ-TCYDCGKNL-VRCPMCQQHITTRIRLY 411 ++ E C +C+++ +D + C H C C L +CP C+Q +T I+++ Sbjct: 229 ADDIEEKYECKVCLERQRDAVLMPCRHFCVCVQCYFGLDQKCPTCRQDVTDFIKIF 284
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 32.0 bits (71), Expect = 1.9 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Frame = -1 Query: 563 SSESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNL-------VRCPMCQQ 438 S E ++C+IC+D +D + CGH C C ++ CP+C++ Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKK 58
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 32.0 bits (71), Expect = 1.9 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Frame = -1 Query: 563 SSESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNL-------VRCPMCQQ 438 S E ++C+IC+D +D + CGH C C ++ CP+C++ Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKK 58
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 13/74 (17%) Frame = -1 Query: 626 SYSSESSQPTATRTPDTYASESSE------STLSCAIC-MDKSKDLAFG-CGHQTCYDCG 471 S E + + DT S S+E + C++C ++ KD CGH CY C Sbjct: 593 SKQDEEHEKEKRKLKDTGVSTSAEELKTFRAMCKCSVCNFERWKDRIISLCGHGFCYQCI 652 Query: 470 KNLV-----RCPMC 444 + + RCP+C Sbjct: 653 QKRIETRQRRCPIC 666
>GAG_BIV27 (P19559) Gag polyprotein (p53) [Contains: Matrix protein p17;| Capsid protein p26; Nucleocapsid protein p14] Length = 476 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = -1 Query: 587 TPDTYASESS--ESTLSCAICMDKSKDLAFGCGHQTCYDCGK 468 TP+ YAS++S E C C K+ L C Q CY CGK Sbjct: 388 TPEAYASQTSGPEDGRRCYGC-GKTGHLKRNCKQQKCYHCGK 428
>GAG_BIV06 (P19558) Gag polyprotein (p53) [Contains: Matrix protein p17;| Capsid protein p26; Nucleocapsid protein p14] Length = 476 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = -1 Query: 587 TPDTYASESS--ESTLSCAICMDKSKDLAFGCGHQTCYDCGK 468 TP+ YAS++S E C C K+ L C Q CY CGK Sbjct: 388 TPEAYASQTSGPEDGRRCYGC-GKTGHLKRNCKQQKCYHCGK 428
>PSH1_YEAST (Q12161) RING finger protein PSH1 (POB3/SPT16 histone-associated| protein 1) Length = 406 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 9/51 (17%) Frame = -1 Query: 551 TLSCAICMDKS-KDLAFGCGHQTCYDC--------GKNLVRCPMCQQHITT 426 +L C+IC D + CGH CY C + + CP C+ ITT Sbjct: 27 SLVCSICHDYMFVPMMTPCGHNYCYGCLNTWFASNTQKELACPQCRSDITT 77
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Frame = -1 Query: 557 ESTLSCAICMDKSKDLAFG-CGHQTCYDCGKNLV-----RCPMC 444 + TL+C C K KD C H CYDC + +CP C Sbjct: 986 KETLTCPSCKVKRKDAVLSKCFHVFCYDCLRTRYETRQRKCPKC 1029
>SIAH2_BRARE (Q7SYL3) Ubiquitin ligase Siah2 (EC 6.3.2.-) (Seven in absentia| homolog 2-like) (Siah-2) Length = 331 Score = 31.6 bits (70), Expect = 2.4 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Frame = -1 Query: 542 CAICMDKSKDLAFGC--GHQTCYDCGKNLVRCPMCQQHITTRIR 417 C +C D C GH C C + L CP C+ +T IR Sbjct: 89 CPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIR 132
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Frame = -1 Query: 569 SESSESTLSCAICMDKSKD-LAFGCGHQTCYDC-------GKNLVRCPMCQ 441 +E + L+C IC+D +D ++ CGH C C G CP C+ Sbjct: 3 AEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECR 53
>ZBT17_CHICK (Q90625) Zinc finger and BTB domain-containing protein 17 (Zinc| finger protein 151) (Zinc finger protein Z13) (Fragment) Length = 706 Score = 31.6 bits (70), Expect = 2.4 Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Frame = -1 Query: 701 GQQTSGFQQSDSFKQRQHAATRRPDSYSSESSQPTATRTPDTYASESSESTL-SCAICMD 525 G++ G + ++ + +P S S E+++ + + D+ S E+ L D Sbjct: 134 GKEEEGEAMVEDEEEAKIPKAAQPKSESKENAEDNESGSTDSGQENSGETRLLRSGTYSD 193 Query: 524 KSKDLAFGCGHQTCYDCGKNLVRCPMCQQHI 432 +++ A+ C DCGK ++HI Sbjct: 194 RTESKAYAAVTHKCEDCGKEFTHTGNFKRHI 224
>RNF26_HUMAN (Q9BY78) RING finger protein 26| Length = 433 Score = 31.6 bits (70), Expect = 2.4 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 9/61 (14%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKD-LAFGCGHQ-TCYDCGKNLVR-------CPMCQQHITTRIRL 414 + E C IC D+SK L C H C C + L+R CP+C++ I + + Sbjct: 372 KEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNV 431 Query: 413 Y 411 Y Sbjct: 432 Y 432
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 31.2 bits (69), Expect = 3.2 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = -1 Query: 578 TYASESSESTLSCAICMDKSKD-LAFGCGHQTCYDC----GKNLVRCPMCQQHITTR 423 ++ ++ E+ L C IC + + + C H C C K V CP+C++ I +R Sbjct: 394 SHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR 450
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 31.2 bits (69), Expect = 3.2 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 5/57 (8%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKDLAFG-CGHQTCYDCGKNLV----RCPMCQQHITTRIRLY 411 E + C IC D ++ CGH CY C + RCP C + LY Sbjct: 128 EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLY 184
>NR2F1_BRARE (Q06725) Nuclear receptor Nr2f1 (Steroid receptor homolog SVP 44)| Length = 411 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%) Frame = -1 Query: 662 KQRQHAATRRPDSYSSESSQPTATRTPDTYASESSEST------LSCAICMDKSKDLAFG 501 +++Q AA+ P + + S QP TP T + S+++ + C +C DKS + Sbjct: 31 REQQQAASAAPHTPQTPS-QPGPPSTPGTAGDKGSQNSGQSQQHIECVVCGDKSSGKHY- 88 Query: 500 CGHQTCYDC 474 G TC C Sbjct: 89 -GQFTCEGC 96
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 31.2 bits (69), Expect = 3.2 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 5/57 (8%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKDLAFG-CGHQTCYDCGKNLV----RCPMCQQHITTRIRLY 411 E + C IC D ++ CGH CY C + RCP C + LY Sbjct: 130 EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLY 186
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 31.2 bits (69), Expect = 3.2 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Frame = -1 Query: 566 ESSESTLSCAICMDKSKDLAFG-CGHQTCYDCGK-----NLVRCPMCQQ 438 E+ + + C++C KD CGH C DC K + +CP C + Sbjct: 583 ENFRTVVYCSLCSKNWKDTVIKTCGHVFCADCCKERLAARMRKCPTCNK 631
>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC6-like) (aPC6) Length = 1696 Score = 31.2 bits (69), Expect = 3.2 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = -1 Query: 635 RPDSYSSESSQPTATRTPD-----TYASESSESTLSCAICMDKSKDLAFGCGHQTCYDCG 471 +P SY ++ Q +T P+ TY +S E+ L C +C K G G + C +C Sbjct: 1355 QPGSYLND--QQCSTHCPEGTFEETYEDDSGETVLQCRLCHVNCK-TCHGEGEEDCMECA 1411 Query: 470 KNL 462 ++ Sbjct: 1412 NDI 1414
>LAMA3_HUMAN (Q16787) Laminin alpha-3 chain precursor (Epiligrin 170 kDa subunit)| (E170) (Nicein alpha subunit) Length = 1713 Score = 30.8 bits (68), Expect = 4.2 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -2 Query: 568 QKVQKAHFHAPYVWINQKILHLDVDTRLAMTAGKI 464 Q + +H+ V I Q ILHL++DT + TAG+I Sbjct: 1614 QSLCDGQWHSVAVTIKQHILHLELDTDSSYTAGQI 1648
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 30.8 bits (68), Expect = 4.2 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = -1 Query: 542 CAICMDKSKD-LAFGCGHQTCYDCGKNLV----RCPMCQQHITTRIR 417 CA+C+D + CGH C C ++ + +CP+C+ H IR Sbjct: 8 CAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLCRAHTGNPIR 54
>TRIM2_HUMAN (Q9C040) Tripartite motif protein 2 (RING finger protein 86)| Length = 744 Score = 30.8 bits (68), Expect = 4.2 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 8/60 (13%) Frame = -1 Query: 593 TRTPDTYASESSESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQ 438 T P + + L C+IC+++ K+ C H C C +N + CP+C+Q Sbjct: 6 TNIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQ 65
>TRI34_MOUSE (Q99PP6) Tripartite motif protein 34| Length = 485 Score = 30.8 bits (68), Expect = 4.2 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 11/45 (24%) Frame = -1 Query: 545 SCAICMDK-SKDLAFGCGHQTCYDC---GKNLV-------RCPMC 444 +C +C + +K L+ GCGH+ C C KN V CP+C Sbjct: 14 TCPVCQELLTKALSLGCGHRVCQACLITKKNAVINPREKSSCPVC 58
>CGRF1_HUMAN (Q99675) Cell growth regulator with RING finger domain 1 (Cell| growth regulatory gene 19 protein) Length = 332 Score = 30.4 bits (67), Expect = 5.4 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -1 Query: 563 SSESTLSCAICMDKSKD-LAFGCGHQT-CYDCGKNLVRCPMCQQHI 432 S E++ C +C + + + + C H C C K +CPMC+Q + Sbjct: 267 SEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFV 312
>TRI52_HUMAN (Q96A61) Tripartite motif protein 52 (RING finger protein 102)| Length = 297 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = -1 Query: 542 CAICMDKSKD-LAFGCGHQTCYDC 474 CAIC+D KD ++ CGH C C Sbjct: 20 CAICLDYFKDPVSISCGHNFCRGC 43
>ESA8C_TRYEQ (P26337) Putative adenylate cyclase regulatory protein| Length = 630 Score = 30.4 bits (67), Expect = 5.4 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = -1 Query: 542 CAICMDKSKDLA---FGCGHQTCYDCGKNLVRCPMCQQHITTR 423 CA+C + + A F C H C C RCP CQ+ I R Sbjct: 10 CAVCREPWAEGALELFPCRHVFCTVCVVERWRCPSCQRRIGGR 52
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 30.4 bits (67), Expect = 5.4 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQHITTR 423 + L C IC++ K+ ++ C H C C L+ +CP+C+ IT R Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKR 71
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 30.4 bits (67), Expect = 5.4 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 2/86 (2%) Frame = -1 Query: 680 QQSDSFKQRQHAATRRPDSYSSESSQPTATRTPDTYA-SESSESTLSCAICMDKSKD-LA 507 ++SDS + + S S S P P+ +E L C +C KD + Sbjct: 8 RRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLCCQLCCSVFKDPVI 67 Query: 506 FGCGHQTCYDCGKNLVRCPMCQQHIT 429 CGH C C +CP+ +T Sbjct: 68 TTCGHTFCRRCALKSEKCPVDNAKLT 93
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 30.4 bits (67), Expect = 5.4 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQHITTR 423 + L C IC++ K+ ++ C H C C L+ +CP+C+ IT R Sbjct: 19 QKILECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKR 71
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 30.0 bits (66), Expect = 7.1 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 2/86 (2%) Frame = -1 Query: 680 QQSDSFKQRQHAATRRPDSYSSESSQPTATRTPDTYA-SESSESTLSCAICMDKSKD-LA 507 ++SDS + + S S S P P+ +E L C +C KD + Sbjct: 84 RRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLCCQLCCSVFKDPVI 143 Query: 506 FGCGHQTCYDCGKNLVRCPMCQQHIT 429 CGH C C +CP+ +T Sbjct: 144 TTCGHTFCRRCALKSEKCPVDNVKLT 169
>ARI2_DROME (O76924) Protein ariadne-2 (Ari-2)| Length = 509 Score = 30.0 bits (66), Expect = 7.1 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -1 Query: 575 YASESSESTLSCAICMDKSKDLAFGCGHQTCYDCGKNLVRCPMC 444 Y S ++ C IC++K+ GC H C++C + C MC Sbjct: 303 YISAHTKDCPKCHICIEKNG----GCNHMQCFNCKHDF--CWMC 340
>TRI41_HUMAN (Q8WV44) Tripartite motif protein 41| Length = 630 Score = 30.0 bits (66), Expect = 7.1 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = -1 Query: 587 TPDTYASESSESTLSCAICMDKSKD-LAFGCGHQTCYDC 474 TP+ + E+ CAIC+D D ++ GCGH C C Sbjct: 7 TPNPVQTLQEEAV--CAICLDYFTDPVSIGCGHNFCRVC 43
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQHITTR 423 + L C IC++ K+ ++ C H C C L+ +CP+C+ IT R Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKR 71
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQHITTR 423 + L C IC++ K+ ++ C H C C L+ +CP+C+ IT R Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKR 71
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQHITTR 423 + L C IC++ K+ ++ C H C C L+ +CP+C+ IT R Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITKR 71
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQHITTR 423 + L C IC++ K+ ++ C H C C L+ +CP+C+ IT R Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKR 71
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQHITTR 423 + L C IC++ K+ ++ C H C C L+ +CP+C+ IT R Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKR 71
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 30.0 bits (66), Expect = 7.1 Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Frame = -1 Query: 542 CAICMDKSKD-LAFGCGHQTCYDC----GKNLVRCPMCQQHITTRIRLY 411 C +C+++ + A CGH C++C + CP+C++ + +Y Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIY 321
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 30.0 bits (66), Expect = 7.1 Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Frame = -1 Query: 542 CAICMDKSKD-LAFGCGHQTCYDC----GKNLVRCPMCQQHITTRIRLY 411 C +C+++ + A CGH C++C + CP+C++ + +Y Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIY 321
>SIA1_CAEEL (Q965X6) Ubiquitin ligase sia-1 (EC 6.3.2.-) (Seven in absentia| homolog 1) Length = 339 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 5/76 (6%) Frame = -1 Query: 653 QHAATRRPDSYSSESSQPTATRTPDTYASESSESTLS---CAICMDKSKDLAFGC--GHQ 489 Q+ T+R S++S +SS LS C +C++ C GH Sbjct: 50 QYRTTQRRPRKESKASHHIFQSAGGGATDDSSAEILSVFECPVCLEYMLPPYMQCSSGHL 109 Query: 488 TCYDCGKNLVRCPMCQ 441 C +C L CP C+ Sbjct: 110 VCSNCRPKLQCCPTCR 125
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQHITTR 423 + L C IC++ K+ ++ C H C C L+ +CP+C+ IT R Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKR 71
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -1 Query: 557 ESTLSCAICMDKSKD-LAFGCGHQTCYDCGKNLV-------RCPMCQQHITTR 423 + L C IC++ K+ ++ C H C C L+ +CP+C+ IT R Sbjct: 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKR 71
>VG10_BPML5 (Q05285) Gene 10 protein (Gp10)| Length = 292 Score = 29.6 bits (65), Expect = 9.3 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = -2 Query: 676 NQTVSNSDSMQLQEG-LTAIHQKVHSLRLQGHPI 578 NQT S SD EG + +HQK+HS+ HPI Sbjct: 198 NQTASTSDLATPGEGAIWQLHQKIHSIDGMLHPI 231
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 29.6 bits (65), Expect = 9.3 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Frame = -1 Query: 620 SSESSQPTATRTPDTYASESSESTLSCAICMDKSKD-LAFGCGHQ-TCYDCGKNLV-RCP 450 +SE TA P A SE+ L C +C+++ +D + C H C C L +CP Sbjct: 203 NSERRAETAPGEPAP-AFAGSEA-LECKVCLERQRDAVLLPCRHFCVCMQCYFALDGKCP 260 Query: 449 MCQQHITTRIRLY 411 C+Q + I+++ Sbjct: 261 TCRQDVADFIKIF 273
>TSC10_ASHGO (Q758B6) 3-ketodihydrosphingosine reductase TSC10 (EC 1.1.1.102)| (3-dehydrosphinganine reductase) (KDS reductase) Length = 307 Score = 29.6 bits (65), Expect = 9.3 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 2/93 (2%) Frame = -1 Query: 632 PDSYSSES-SQPTATRTPDTYASESSESTLSCAICMDK-SKDLAFGCGHQTCYDCGKNLV 459 P +++SE ++ T+ T A E S +SCA C DK + L G T G L+ Sbjct: 189 PGNFASEGYAEENRTKPAITAAIEGSSEAISCAACCDKIVRGLRSGYDDVTTDFVGWLLL 248 Query: 458 RCPMCQQHITTRIRLY*LKADLLMIFKPMALPI 360 C M + +T L+ L L + + +PI Sbjct: 249 ACNMGFNYHSTTYFLWPLGWLLGALVNLLVVPI 281 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,579,022 Number of Sequences: 219361 Number of extensions: 2237123 Number of successful extensions: 6103 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 5791 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6091 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7026286028 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
