ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd13d13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SELK_HUMAN (Q9Y6D0) Selenoprotein K | 32 | 0.83 | 2 | SELK_CHILA (Q6S9C4) Selenoprotein K | 32 | 0.83 | 3 | SELK_RAT (P59798) Selenoprotein K | 31 | 2.4 | 4 | SELK_MOUSE (Q9JLJ1) Selenoprotein K | 29 | 9.2 |
|---|
>SELK_HUMAN (Q9Y6D0) Selenoprotein K| Length = 94 Score = 32.3 bits (72), Expect = 0.83 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -1 Query: 531 WRLSIIPDFFKAVVNFIRMFFLTM 460 WRLS+I DFF + F+ +FF T+ Sbjct: 18 WRLSLITDFFWGIAEFVVLFFKTL 41
>SELK_CHILA (Q6S9C4) Selenoprotein K| Length = 94 Score = 32.3 bits (72), Expect = 0.83 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -1 Query: 531 WRLSIIPDFFKAVVNFIRMFFLTM 460 WRLS+I DFF + F+ +FF T+ Sbjct: 18 WRLSLITDFFWGIAEFVVLFFKTL 41
>SELK_RAT (P59798) Selenoprotein K| Length = 94 Score = 30.8 bits (68), Expect = 2.4 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 531 WRLSIIPDFFKAVVNFIRMFFLTM 460 WRLS I DFF + F+ FF T+ Sbjct: 18 WRLSFITDFFWGIAEFVVFFFKTL 41
>SELK_MOUSE (Q9JLJ1) Selenoprotein K| Length = 94 Score = 28.9 bits (63), Expect = 9.2 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -1 Query: 531 WRLSIIPDFFKAVVNFIRMFFLTM 460 WR+S + DFF + F+ FF T+ Sbjct: 18 WRVSFLTDFFWGIAEFVVFFFKTL 41 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,582,791 Number of Sequences: 219361 Number of extensions: 931289 Number of successful extensions: 2198 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2194 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
