ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT017484.1| Zea mays clone EL01N0412C09.c mRNA sequence 295 8e-77
2ref|XM_479284.1| Oryza sativa (japonica cultivar-group), mRNA 266 7e-68
3dbj|AK067207.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 7e-68
4dbj|AK105043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 1e-66
5dbj|AK060069.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 1e-66
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
7dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
9dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 9e-12
11gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 80 9e-12
12gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
14dbj|AK099464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 9e-12
15dbj|AK062116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 9e-12
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
17dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
18dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
19ref|XM_741731.1| Aspergillus fumigatus Af293 endo-1,4-beta-manno... 42 1.9
20gb|AC040162.5| Homo sapiens chromosome 16 clone CTC-479C5, compl... 42 1.9
21ref|NM_022675.1| Rattus norvegicus FK506 binding protein 1b (Fkb... 42 1.9
22dbj|D86642.1| Rattus norvegicus mRNA for FK506-binding protein 1... 42 1.9
23gb|AC007361.2| Homo sapiens BAC clone RP11-144P23 from 7, comple... 40 7.6
24ref|XM_500170.1| Yarrowia lipolytica CLIB122, YALI0A17578g predi... 40 7.6
25gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, com... 40 7.6
26emb|AL954851.5| Zebrafish DNA sequence from clone CH211-280J3, c... 40 7.6
27emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 7.6

>gb|BT017484.1| Zea mays clone EL01N0412C09.c mRNA sequence
          Length = 1014

 Score =  295 bits (149), Expect = 8e-77
 Identities = 269/309 (87%)
 Strand = Plus / Minus

                                                                       
Query: 246 gagggaagcgacgaaatggatctggacctcctcgtcgactgtcgagaagaggggcacatg 305
           ||||||||||||||| || |||||||||||||||||||  ||| |||||||||| |||||
Sbjct: 826 gagggaagcgacgaagtgcatctggacctcctcgtcgatcgtcaagaagaggggaacatg 767

                                                                       
Query: 306 cacaaacagagacttgatgccgtgctgctccgcgaaccggagagagtggtagtacacata 365
           ||| ||||| || ||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 766 cacgaacagggatttgatgccgtgttgctccgcgaaccgaagagagtggtagtacacgta 707

                                                                       
Query: 366 gttgcacacgaaccgcccggcgtcatccgaaggcatcacatcgtagcctgtctttcggag 425
           |||||| || ||||| ||||||||  | || |||| ||| ||||||||| |||| |||||
Sbjct: 706 gttgcatacaaaccgaccggcgtcgccggagggcaccacgtcgtagcctatcttccggag 647

                                                                       
Query: 426 tgacttggttaactctttcactggcagtgtagtctctcttgtccgtgagatgcttccgtc 485
           |||||||||||| || || |||||||| ||||||||||| ||||||||||||||||| ||
Sbjct: 646 tgacttggttaattcattgactggcagggtagtctctctcgtccgtgagatgcttccatc 587

                                                                       
Query: 486 agatggaacaatagggactctctgaggcttccacccaagctcatctgggcagcggaaggt 545
           ||| || ||||||||||| ||||| || ||||| || ||||||||||| || ||||||||
Sbjct: 586 agagggcacaatagggaccctctgtggtttccatcctagctcatctggacaccggaaggt 527

                    
Query: 546 ggcttcatt 554
            || |||||
Sbjct: 526 agcctcatt 518



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>ref|XM_479284.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1227

 Score =  266 bits (134), Expect = 7e-68
 Identities = 284/334 (85%)
 Strand = Plus / Minus

                                                                       
Query: 218 cctagttcaggctagcgagagcttcgacgagggaagcgacgaaatggatctggacctcct 277
           ||||||||| |  ||| |||||||| |  |||||||| || ||||| |||||||||||||
Sbjct: 970 cctagttcaagacagcaagagcttcaagaagggaagcaacaaaatgcatctggacctcct 911

                                                                       
Query: 278 cgtcgactgtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccg 337
           | ||||  ||| |||| ||||||||||| ||||||||||| ||||||||||| ||||| |
Sbjct: 910 catcgatcgtcaagaacaggggcacatgtacaaacagagatttgatgccgtgttgctctg 851

                                                                       
Query: 338 cgaaccggagagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaag 397
           ||||||| ||||| || || |||||||||||||| || ||||| || || || || || |
Sbjct: 850 cgaaccgaagagaatgataatacacatagttgcatacaaaccgaccagcatcgtctgatg 791

                                                                       
Query: 398 gcatcacatcgtagcctgtctttcggagtgacttggttaactctttcactggcagtgtag 457
           |||| ||||||||||||||||| |||||||||||||| ||||| || || || || ||||
Sbjct: 790 gcattacatcgtagcctgtcttccggagtgacttggtcaactcatttaccggaagcgtag 731

                                                                       
Query: 458 tctctcttgtccgtgagatgcttccgtcagatggaacaatagggactctctgaggcttcc 517
           ||||||||||||||||||||  ||| || ||||| |||||||| || |||||||| ||||
Sbjct: 730 tctctcttgtccgtgagatggctccatccgatggtacaataggaaccctctgaggtttcc 671

                                             
Query: 518 acccaagctcatctgggcagcggaaggtggcttc 551
           |||| ||||||||||| || ||||||||||||||
Sbjct: 670 accctagctcatctggacaacggaaggtggcttc 637



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>dbj|AK067207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M06, full
           insert sequence
          Length = 1228

 Score =  266 bits (134), Expect = 7e-68
 Identities = 284/334 (85%)
 Strand = Plus / Minus

                                                                       
Query: 218 cctagttcaggctagcgagagcttcgacgagggaagcgacgaaatggatctggacctcct 277
           ||||||||| |  ||| |||||||| |  |||||||| || ||||| |||||||||||||
Sbjct: 971 cctagttcaagacagcaagagcttcaagaagggaagcaacaaaatgcatctggacctcct 912

                                                                       
Query: 278 cgtcgactgtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccg 337
           | ||||  ||| |||| ||||||||||| ||||||||||| ||||||||||| ||||| |
Sbjct: 911 catcgatcgtcaagaacaggggcacatgtacaaacagagatttgatgccgtgttgctctg 852

                                                                       
Query: 338 cgaaccggagagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaag 397
           ||||||| ||||| || || |||||||||||||| || ||||| || || || || || |
Sbjct: 851 cgaaccgaagagaatgataatacacatagttgcatacaaaccgaccagcatcgtctgatg 792

                                                                       
Query: 398 gcatcacatcgtagcctgtctttcggagtgacttggttaactctttcactggcagtgtag 457
           |||| ||||||||||||||||| |||||||||||||| ||||| || || || || ||||
Sbjct: 791 gcattacatcgtagcctgtcttccggagtgacttggtcaactcatttaccggaagcgtag 732

                                                                       
Query: 458 tctctcttgtccgtgagatgcttccgtcagatggaacaatagggactctctgaggcttcc 517
           ||||||||||||||||||||  ||| || ||||| |||||||| || |||||||| ||||
Sbjct: 731 tctctcttgtccgtgagatggctccatccgatggtacaataggaaccctctgaggtttcc 672

                                             
Query: 518 acccaagctcatctgggcagcggaaggtggcttc 551
           |||| ||||||||||| || ||||||||||||||
Sbjct: 671 accctagctcatctggacaacggaaggtggcttc 638



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>dbj|AK105043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A05, full
           insert sequence
          Length = 1012

 Score =  262 bits (132), Expect = 1e-66
 Identities = 273/320 (85%)
 Strand = Plus / Minus

                                                                       
Query: 235 agagcttcgacgagggaagcgacgaaatggatctggacctcctcgtcgactgtcgagaag 294
           ||||||||||  |||||||| || ||||| |||||||||||||| ||||  ||| |||| 
Sbjct: 877 agagcttcgagaagggaagcaacaaaatgcatctggacctcctcatcgatcgtcaagaac 818

                                                                       
Query: 295 aggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccggagagagtgg 354
           ||||||||||| ||||||||||| ||||||||||| ||||| || ||||| | |||||| 
Sbjct: 817 aggggcacatgtacaaacagagatttgatgccgtgttgctctgcaaaccgaaaagagtga 758

                                                                       
Query: 355 tagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcacatcgtagcct 414
           || |||||||||||||| |||||||| || || || || || ||||| ||||| ||||||
Sbjct: 757 taatacacatagttgcatacgaaccgaccagcatcgtctgatggcattacatcatagcct 698

                                                                       
Query: 415 gtctttcggagtgacttggttaactctttcactggcagtgtagtctctcttgtccgtgag 474
           ||||| |||||||||||||||||||| || || || || |||||||||||||| ||||||
Sbjct: 697 gtcttccggagtgacttggttaactcatttaccggaagggtagtctctcttgtgcgtgag 638

                                                                       
Query: 475 atgcttccgtcagatggaacaatagggactctctgaggcttccacccaagctcatctggg 534
           || | ||| |||||||| ||||| ||  | |||||||| |||||||| ||||||||||| 
Sbjct: 637 attcctccatcagatggcacaatgggagccctctgaggtttccaccctagctcatctgga 578

                               
Query: 535 cagcggaaggtggcttcatt 554
           || |||||||||||||||||
Sbjct: 577 caacggaaggtggcttcatt 558



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>dbj|AK060069.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H12, full
           insert sequence
          Length = 1012

 Score =  262 bits (132), Expect = 1e-66
 Identities = 273/320 (85%)
 Strand = Plus / Minus

                                                                       
Query: 235 agagcttcgacgagggaagcgacgaaatggatctggacctcctcgtcgactgtcgagaag 294
           ||||||||||  |||||||| || ||||| |||||||||||||| ||||  ||| |||| 
Sbjct: 877 agagcttcgagaagggaagcaacaaaatgcatctggacctcctcatcgatcgtcaagaac 818

                                                                       
Query: 295 aggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccggagagagtgg 354
           ||||||||||| ||||||||||| ||||||||||| ||||| || ||||| | |||||| 
Sbjct: 817 aggggcacatgtacaaacagagatttgatgccgtgttgctctgcaaaccgaaaagagtga 758

                                                                       
Query: 355 tagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcacatcgtagcct 414
           || |||||||||||||| |||||||| || || || || || ||||| ||||| ||||||
Sbjct: 757 taatacacatagttgcatacgaaccgaccagcatcgtctgatggcattacatcatagcct 698

                                                                       
Query: 415 gtctttcggagtgacttggttaactctttcactggcagtgtagtctctcttgtccgtgag 474
           ||||| |||||||||||||||||||| || || || || |||||||||||||| ||||||
Sbjct: 697 gtcttccggagtgacttggttaactcatttaccggaagggtagtctctcttgtgcgtgag 638

                                                                       
Query: 475 atgcttccgtcagatggaacaatagggactctctgaggcttccacccaagctcatctggg 534
           || | ||| |||||||| ||||| ||  | |||||||| |||||||| ||||||||||| 
Sbjct: 637 attcctccatcagatggcacaatgggagccctctgaggtttccaccctagctcatctgga 578

                               
Query: 535 cagcggaaggtggcttcatt 554
           || |||||||||||||||||
Sbjct: 577 caacggaaggtggcttcatt 558



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  186 bits (94), Expect = 5e-44
 Identities = 178/206 (86%)
 Strand = Plus / Minus

                                                                            
Query: 235      agagcttcgacgagggaagcgacgaaatggatctggacctcctcgtcgactgtcgagaag 294
                ||||||||||  |||||||| || ||||| |||||||||||||| ||||  ||| |||| 
Sbjct: 13761893 agagcttcgagaagggaagcaacaaaatgcatctggacctcctcatcgatcgtcaagaac 13761834

                                                                            
Query: 295      aggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccggagagagtgg 354
                ||||||||||| ||||||||||| ||||||||||| ||||| || ||||| |||||||| 
Sbjct: 13761833 aggggcacatgtacaaacagagatttgatgccgtgttgctctgcaaaccgaagagagtga 13761774

                                                                            
Query: 355      tagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcacatcgtagcct 414
                || |||||||||||||| |||||||| || || || || || ||||| ||||| ||||||
Sbjct: 13761773 taatacacatagttgcatacgaaccgaccagcatcgtctgatggcattacatcatagcct 13761714

                                          
Query: 415      gtctttcggagtgacttggttaactc 440
                ||||| ||||||||||||||||||||
Sbjct: 13761713 gtcttccggagtgacttggttaactc 13761688



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                                
Query: 507      ctgaggcttccacccaagctcatctgggcagcggaaggtggcttcatt 554
                |||||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct: 13760855 ctgaggtttccaccctagctcatctggacaacggaaggtggcttcatt 13760808



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>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1655_B12
          Length = 132736

 Score =  186 bits (94), Expect = 5e-44
 Identities = 178/206 (86%)
 Strand = Plus / Minus

                                                                         
Query: 235   agagcttcgacgagggaagcgacgaaatggatctggacctcctcgtcgactgtcgagaag 294
             ||||||||||  |||||||| || ||||| |||||||||||||| ||||  ||| |||| 
Sbjct: 11377 agagcttcgagaagggaagcaacaaaatgcatctggacctcctcatcgatcgtcaagaac 11318

                                                                         
Query: 295   aggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccggagagagtgg 354
             ||||||||||| ||||||||||| ||||||||||| ||||| || ||||| |||||||| 
Sbjct: 11317 aggggcacatgtacaaacagagatttgatgccgtgttgctctgcaaaccgaagagagtga 11258

                                                                         
Query: 355   tagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcacatcgtagcct 414
             || |||||||||||||| |||||||| || || || || || ||||| ||||| ||||||
Sbjct: 11257 taatacacatagttgcatacgaaccgaccagcatcgtctgatggcattacatcatagcct 11198

                                       
Query: 415   gtctttcggagtgacttggttaactc 440
             ||||| ||||||||||||||||||||
Sbjct: 11197 gtcttccggagtgacttggttaactc 11172



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 507   ctgaggcttccacccaagctcatctgggcagcggaaggtggcttcatt 554
             |||||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct: 10339 ctgaggtttccaccctagctcatctggacaacggaaggtggcttcatt 10292



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  172 bits (87), Expect = 8e-40
 Identities = 189/223 (84%)
 Strand = Plus / Plus

                                                                            
Query: 218      cctagttcaggctagcgagagcttcgacgagggaagcgacgaaatggatctggacctcct 277
                ||||||||| |  ||| |||||||| |  |||||||| || ||||| |||||||||||||
Sbjct: 26565338 cctagttcaagacagcaagagcttcaagaagggaagcaacaaaatgcatctggacctcct 26565397

                                                                            
Query: 278      cgtcgactgtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccg 337
                | ||||  ||| |||| ||||||||||| ||||||||||| ||||||||||| ||||| |
Sbjct: 26565398 catcgatcgtcaagaacaggggcacatgtacaaacagagatttgatgccgtgttgctctg 26565457

                                                                            
Query: 338      cgaaccggagagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaag 397
                ||||||| ||||| || || |||||||||||||| || ||||| || || || || || |
Sbjct: 26565458 cgaaccgaagagaatgataatacacatagttgcatacaaaccgaccagcatcgtctgatg 26565517

                                                           
Query: 398      gcatcacatcgtagcctgtctttcggagtgacttggttaactc 440
                |||| ||||||||||||||||| |||||||||||||| |||||
Sbjct: 26565518 gcattacatcgtagcctgtcttccggagtgacttggtcaactc 26565560



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 507      ctgaggcttccacccaagctcatctgggcagcggaaggtggcttc 551
                |||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 26566352 ctgaggtttccaccctagctcatctggacaacggaaggtggcttc 26566396



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                   
Query: 459      ctctcttgtccgtgagatgcttccgtcagatggaacaatagggactctctg 509
                |||||||||||||||||||  ||| || ||||| |||||||| || |||||
Sbjct: 26566227 ctctcttgtccgtgagatggctccatccgatggtacaataggaaccctctg 26566277



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>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1340_C08
          Length = 192167

 Score =  172 bits (87), Expect = 8e-40
 Identities = 189/223 (84%)
 Strand = Plus / Plus

                                                                          
Query: 218    cctagttcaggctagcgagagcttcgacgagggaagcgacgaaatggatctggacctcct 277
              ||||||||| |  ||| |||||||| |  |||||||| || ||||| |||||||||||||
Sbjct: 110609 cctagttcaagacagcaagagcttcaagaagggaagcaacaaaatgcatctggacctcct 110668

                                                                          
Query: 278    cgtcgactgtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccg 337
              | ||||  ||| |||| ||||||||||| ||||||||||| ||||||||||| ||||| |
Sbjct: 110669 catcgatcgtcaagaacaggggcacatgtacaaacagagatttgatgccgtgttgctctg 110728

                                                                          
Query: 338    cgaaccggagagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaag 397
              ||||||| ||||| || || |||||||||||||| || ||||| || || || || || |
Sbjct: 110729 cgaaccgaagagaatgataatacacatagttgcatacaaaccgaccagcatcgtctgatg 110788

                                                         
Query: 398    gcatcacatcgtagcctgtctttcggagtgacttggttaactc 440
              |||| ||||||||||||||||| |||||||||||||| |||||
Sbjct: 110789 gcattacatcgtagcctgtcttccggagtgacttggtcaactc 110831



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                           
Query: 507    ctgaggcttccacccaagctcatctgggcagcggaaggtggcttc 551
              |||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 111623 ctgaggtttccaccctagctcatctggacaacggaaggtggcttc 111667



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                 
Query: 459    ctctcttgtccgtgagatgcttccgtcagatggaacaatagggactctctg 509
              |||||||||||||||||||  ||| || ||||| |||||||| || |||||
Sbjct: 111498 ctctcttgtccgtgagatggctccatccgatggtacaataggaaccctctg 111548



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                            
Query: 286      gtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccgg 345
                |||| ||||||||| | ||| || |||| ||||||||| ||| |||| || |||||||  
Sbjct: 14273048 gtcgtgaagagggggaaatggacgaacaaagacttgataccgcgctgttctgcgaaccta 14272989

                                                                            
Query: 346      agagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcaca 405
                ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||  ||||
Sbjct: 14272988 agagattggtaatagacatagttgcatacgaatcgaccagcgtcatccgaaggcgccaca 14272929

                        
Query: 406      tcgtagcc 413
                ||| ||||
Sbjct: 14272928 tcgaagcc 14272921



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>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
             sequence
          Length = 158714

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                         
Query: 286   gtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccgg 345
             |||| ||||||||| | ||| || |||| ||||||||| ||| |||| || |||||||  
Sbjct: 22277 gtcgtgaagagggggaaatggacgaacaaagacttgataccgcgctgttctgcgaaccta 22218

                                                                         
Query: 346   agagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcaca 405
             ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||  ||||
Sbjct: 22217 agagattggtaatagacatagttgcatacgaatcgaccagcgtcatccgaaggcgccaca 22158

                     
Query: 406   tcgtagcc 413
             ||| ||||
Sbjct: 22157 tcgaagcc 22150



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>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNAb0012F18, complete sequence
          Length = 122159

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                         
Query: 286   gtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccgg 345
             |||| ||||||||| | ||| || |||| ||||||||| ||| |||| || |||||||  
Sbjct: 84436 gtcgtgaagagggggaaatggacgaacaaagacttgataccgcgctgttctgcgaaccta 84377

                                                                         
Query: 346   agagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcaca 405
             ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||  ||||
Sbjct: 84376 agagattggtaatagacatagttgcatacgaatcgaccagcgtcatccgaaggcgccaca 84317

                     
Query: 406   tcgtagcc 413
             ||| ||||
Sbjct: 84316 tcgaagcc 84309



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                            
Query: 286      gtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccgg 345
                |||| ||||||||| | ||| || |||| ||||||||| ||| |||| || |||||||  
Sbjct: 14268023 gtcgtgaagagggggaaatggacgaacaaagacttgataccgcgctgttctgcgaaccta 14267964

                                                                            
Query: 346      agagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcaca 405
                ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||  ||||
Sbjct: 14267963 agagattggtaatagacatagttgcatacgaatcgaccagcgtcatccgaaggcgccaca 14267904

                        
Query: 406      tcgtagcc 413
                ||| ||||
Sbjct: 14267903 tcgaagcc 14267896



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>dbj|AK099464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023I17, full
           insert sequence
          Length = 1114

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 286 gtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccgg 345
           |||| ||||||||| | ||| || |||| ||||||||| ||| |||| || |||||||  
Sbjct: 809 gtcgtgaagagggggaaatggacgaacaaagacttgataccgcgctgttctgcgaaccta 750

                                                                       
Query: 346 agagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcaca 405
           ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||  ||||
Sbjct: 749 agagattggtaatagacatagttgcatacgaatcgaccagcgtcatccgaaggcgccaca 690

                   
Query: 406 tcgtagcc 413
           ||| ||||
Sbjct: 689 tcgaagcc 682



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                       
Query: 471 tgagatgcttccgtcagatggaacaatagggactctctgaggcttccacccaagctcatc 530
           |||||||||||| |||||||  ||||||||| | ||||| || ||||| || ||||||||
Sbjct: 624 tgagatgcttccatcagatgacacaataggggccctctgtggtttccatcccagctcatc 565

                                   
Query: 531 tgggcagcggaaggtggcttcatt 554
            ||||| |||||||| ||||||||
Sbjct: 564 agggcaacggaaggtagcttcatt 541



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>dbj|AK062116.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C05, full
           insert sequence
          Length = 1164

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 286 gtcgagaagaggggcacatgcacaaacagagacttgatgccgtgctgctccgcgaaccgg 345
           |||| ||||||||| | ||| || |||| ||||||||| ||| |||| || |||||||  
Sbjct: 871 gtcgtgaagagggggaaatggacgaacaaagacttgataccgcgctgttctgcgaaccta 812

                                                                       
Query: 346 agagagtggtagtacacatagttgcacacgaaccgcccggcgtcatccgaaggcatcaca 405
           ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||  ||||
Sbjct: 811 agagattggtaatagacatagttgcatacgaatcgaccagcgtcatccgaaggcgccaca 752

                   
Query: 406 tcgtagcc 413
           ||| ||||
Sbjct: 751 tcgaagcc 744



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                       
Query: 471 tgagatgcttccgtcagatggaacaatagggactctctgaggcttccacccaagctcatc 530
           |||||||||||| |||||||  ||||||||| | ||||| || ||||| || ||||||||
Sbjct: 686 tgagatgcttccatcagatgacacaataggggccctctgtggtttccatcccagctcatc 627

                                   
Query: 531 tgggcagcggaaggtggcttcatt 554
            ||||| |||||||| ||||||||
Sbjct: 626 agggcaacggaaggtagcttcatt 603



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 170     aactttacatcttccaggtcaa 191
               ||||||||||||||||||||||
Sbjct: 8184579 aactttacatcttccaggtcaa 8184558



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>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1047A05
          Length = 157517

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 170    aactttacatcttccaggtcaa 191
              ||||||||||||||||||||||
Sbjct: 152890 aactttacatcttccaggtcaa 152869



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>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1449_H02
          Length = 117860

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 170   aactttacatcttccaggtcaa 191
             ||||||||||||||||||||||
Sbjct: 17261 aactttacatcttccaggtcaa 17240



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>ref|XM_741731.1| Aspergillus fumigatus Af293 endo-1,4-beta-mannosidase (Afu7g01070)
           partial mRNA
          Length = 1434

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 318 cttgatgccgtgctgctccgc 338
           |||||||||||||||||||||
Sbjct: 693 cttgatgccgtgctgctccgc 673



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>gb|AC040162.5| Homo sapiens chromosome 16 clone CTC-479C5, complete sequence
          Length = 217470

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 517    cacccaagctcatctgggcag 537
              |||||||||||||||||||||
Sbjct: 204042 cacccaagctcatctgggcag 204022



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>ref|NM_022675.1| Rattus norvegicus FK506 binding protein 1b (Fkbp1b), mRNA
          Length = 327

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 519 cccaagctcatctgggcagcg 539
           |||||||||||||||||||||
Sbjct: 209 cccaagctcatctgggcagcg 189



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>dbj|D86642.1| Rattus norvegicus mRNA for FK506-binding protein 12.6, complete cds
          Length = 327

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 519 cccaagctcatctgggcagcg 539
           |||||||||||||||||||||
Sbjct: 209 cccaagctcatctgggcagcg 189



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>gb|AC007361.2| Homo sapiens BAC clone RP11-144P23 from 7, complete sequence
          Length = 36465

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   tttttctctccccttaaata 99
            ||||||||||||||||||||
Sbjct: 1325 tttttctctccccttaaata 1306



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>ref|XM_500170.1| Yarrowia lipolytica CLIB122, YALI0A17578g predicted mRNA
          Length = 3702

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  gaaggcatcacatcgtagcc 413
            ||||||||||||||||||||
Sbjct: 2957 gaaggcatcacatcgtagcc 2938



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>gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, complete sequence
          Length = 253504

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    cacatgcacaaacagagact 319
              ||||||||||||||||||||
Sbjct: 186958 cacatgcacaaacagagact 186977



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>emb|AL954851.5| Zebrafish DNA sequence from clone CH211-280J3, complete sequence
          Length = 177221

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 290   agaagaggggcacatgcacaaacagaga 317
             ||||||||  ||||||||||||||||||
Sbjct: 18089 agaagaggttcacatgcacaaacagaga 18116



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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 394     gaaggcatcacatcgtagcc 413
               ||||||||||||||||||||
Sbjct: 1816198 gaaggcatcacatcgtagcc 1816179


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,806,892
Number of Sequences: 3902068
Number of extensions: 3806892
Number of successful extensions: 69266
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69099
Number of HSP's gapped (non-prelim): 167
length of query: 557
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 534
effective length of database: 17,143,297,704
effective search space: 9154520973936
effective search space used: 9154520973936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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