>gb|AC013400.8| Homo sapiens BAC clone RP11-79O8 from 2, complete sequence
          Length = 129542

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    tgtaaaagacatgtaacatat 149
              |||||||||||||||||||||
Sbjct: 117260 tgtaaaagacatgtaacatat 117280

>gb|AC007865.8| Trypanosoma brucei chromosome 2 clone RPCI93-30M24, complete sequence
          Length = 148533

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   agcagcaaaccacacataaa 203
             ||||||||||||||||||||
Sbjct: 51292 agcagcaaaccacacataaa 51273

>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    agcagcaaaccacacataaa 203
              ||||||||||||||||||||
Sbjct: 859950 agcagcaaaccacacataaa 859969

>gb|AC112866.5| Rattus norvegicus 1 BAC CH230-375M13 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 147079

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   gcaaaccacacataaaacaa 207
             ||||||||||||||||||||
Sbjct: 56608 gcaaaccacacataaaacaa 56627

>ref|XM_946571.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.2.4840)
           partial mRNA
          Length = 441

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 agcagcaaaccacacataaa 203
           ||||||||||||||||||||
Sbjct: 361 agcagcaaaccacacataaa 342

>gb|AC010470.7| Homo sapiens chromosome 5 clone CTD-2298M15, complete sequence
          Length = 139589

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    ttaagctgatgtaaaagaca 139
              ||||||||||||||||||||
Sbjct: 109540 ttaagctgatgtaaaagaca 109521

>gb|AC117685.9| Mus musculus chromosome 5, clone RP23-438G9, complete sequence
          Length = 171048

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 189    caaaccacacataaaacaagctca 212
              ||||||||||| ||||||||||||
Sbjct: 119981 caaaccacacaaaaaacaagctca 119958

>gb|AC102608.14| Mus musculus chromosome 3, clone RP23-402L6, complete sequence
          Length = 185014

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   ttattcaacattcattgctc 284
             ||||||||||||||||||||
Sbjct: 46103 ttattcaacattcattgctc 46122


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,343,995
Number of Sequences: 3902068
Number of extensions: 2343995
Number of successful extensions: 46398
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46378
Number of HSP's gapped (non-prelim): 20
length of query: 324
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 302
effective length of database: 17,147,199,772
effective search space: 5178454331144
effective search space used: 5178454331144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)