>gb|U49387.1|TAU49387 Triticum aestivum adenylosuccinate synthetase mRNA, partial cds
          Length = 1741

 Score =  307 bits (155), Expect = 1e-80
 Identities = 241/272 (88%), Gaps = 1/272 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    gacattccccggaaatcattattgcaggtattacatcaccccgcctgccagtggcctgcc 60
            |||||| |||||||||||||||||||||||||||||||||||||| |||||| || || |
Sbjct: 1610 gacatttcccggaaatcattattgcaggtattacatcaccccgcccgccagtagcttgtc 1551

                                                                        
Query: 61   gattgtattacccgctacaattggnanatnaagggtgtgctgncacagcaatgctcacac 120
            ||| |||||||||||||| ||||| | || |||||||||||| |||||||||||||||| 
Sbjct: 1550 gatcgtattacccgctacgattggca-atcaagggtgtgctgacacagcaatgctcacaa 1492

                                                                        
Query: 121  ccgnctanntaagactgaattattctgtccgatacaatagtacccgatcgagtttgccct 180
            | | |||  |||||||||||||||  ||||||||||||||||||  ||||||||||||||
Sbjct: 1491 cggcctagttaagactgaattatttcgtccgatacaatagtaccaaatcgagtttgccct 1432

                                                                        
Query: 181  ttacttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgcc 240
            |||||||||||| ||||||||||||||| | || ||||||||||| ||||||||||| ||
Sbjct: 1431 ttacttgtatatcagagcatccctcccaggcccgacaccaatgtagtggactggaacacc 1372

                                            
Query: 241  gactagctnttntatcctctncacgtaacggc 272
            | | |||| || |||||||| |||||||||||
Sbjct: 1371 ggcgagctcttctatcctctccacgtaacggc 1340

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                           
Query: 180     tttacttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgc 239
               ||||||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||| |
Sbjct: 3968701 tttacttgtatattagagcatccctcccaggtccaacaccaatgtagtggactggaacac 3968760

                                    
Query: 240     cgactagctnttntatcctct 260
               | || |||| || ||||||||
Sbjct: 3968761 caacaagctcttctatcctct 3968781



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 67/83 (80%)
 Strand = Plus / Minus

                                                                            
Query: 185      ttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgccgact 244
                ||||||||||||||||| | |||  |||| || || ||||| |||||||| |  || || 
Sbjct: 27747371 ttgtatatgagagcatcacgccctggtcctacgccgatgtaatggactgggataccaacc 27747312

                                       
Query: 245      agctnttntatcctctncacgta 267
                |||| || |||||||| ||||||
Sbjct: 27747311 agctcttctatcctctccacgta 27747289

>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                          
Query: 180    tttacttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgc 239
              ||||||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||| |
Sbjct: 130667 tttacttgtatattagagcatccctcccaggtccaacaccaatgtagtggactggaacac 130608

                                   
Query: 240    cgactagctnttntatcctct 260
              | || |||| || ||||||||
Sbjct: 130607 caacaagctcttctatcctct 130587

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                           
Query: 180     tttacttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgc 239
               ||||||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||| |
Sbjct: 3968812 tttacttgtatattagagcatccctcccaggtccaacaccaatgtagtggactggaacac 3968871

                                    
Query: 240     cgactagctnttntatcctct 260
               | || |||| || ||||||||
Sbjct: 3968872 caacaagctcttctatcctct 3968892



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 67/83 (80%)
 Strand = Plus / Minus

                                                                            
Query: 185      ttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgccgact 244
                ||||||||||||||||| | |||  |||| || || ||||| |||||||| |  || || 
Sbjct: 27838694 ttgtatatgagagcatcacgccctggtcctacgccgatgtaatggactgggataccaacc 27838635

                                       
Query: 245      agctnttntatcctctncacgta 267
                |||| || |||||||| ||||||
Sbjct: 27838634 agctcttctatcctctccacgta 27838612

>dbj|AK066881.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088J03, full
            insert sequence
          Length = 1662

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                        
Query: 180  tttacttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgc 239
            ||||||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||| |
Sbjct: 1487 tttacttgtatattagagcatccctcccaggtccaacaccaatgtagtggactggaacac 1428

                                 
Query: 240  cgactagctnttntatcctct 260
            | || |||| || ||||||||
Sbjct: 1427 caacaagctcttctatcctct 1407

>gb|AY109844.1| Zea mays CL2010_1 mRNA sequence
          Length = 1804

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                        
Query: 180  tttacttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgc 239
            |||||||||||||||||||||| || ||| |||| ||||||||||| || || ||||| |
Sbjct: 1473 tttacttgtatatgagagcatctctgccaggtccaacaccaatgtagtgcacgggaacac 1414

                                     
Query: 240  cgactagctnttntatcctctncac 264
            | || || | || |||||||| |||
Sbjct: 1413 caacaagttcttctatcctctccac 1389

>gb|U49388.1|ZMU49388 Zea mays adenylosuccinate synthetase mRNA, complete cds
          Length = 1835

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                        
Query: 180  tttacttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgc 239
            |||||||||||||||||||||| || ||| |||| ||||||||||| || || ||||| |
Sbjct: 1473 tttacttgtatatgagagcatctctgccaggtccaacaccaatgtagtgcacgggaacac 1414

                                     
Query: 240  cgactagctnttntatcctctncac 264
            | || || | || |||||||| |||
Sbjct: 1413 caacaagttcttctatcctctccac 1389

>ref|XM_469397.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1470

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 67/83 (80%)
 Strand = Plus / Minus

                                                                        
Query: 185  ttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgccgact 244
            ||||||||||||||||| | |||  |||| || || ||||| |||||||| |  || || 
Sbjct: 1466 ttgtatatgagagcatcacgccctggtcctacgccgatgtaatggactgggataccaacc 1407

                                   
Query: 245  agctnttntatcctctncacgta 267
            |||| || |||||||| ||||||
Sbjct: 1406 agctcttctatcctctccacgta 1384

>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 67/83 (80%)
 Strand = Plus / Plus

                                                                         
Query: 185   ttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgccgact 244
             ||||||||||||||||| | |||  |||| || || ||||| |||||||| |  || || 
Sbjct: 66523 ttgtatatgagagcatcacgccctggtcctacgccgatgtaatggactgggataccaacc 66582

                                    
Query: 245   agctnttntatcctctncacgta 267
             |||| || |||||||| ||||||
Sbjct: 66583 agctcttctatcctctccacgta 66605

>dbj|AK120407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091H09, full
            insert sequence
          Length = 1742

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 67/83 (80%)
 Strand = Plus / Minus

                                                                        
Query: 185  ttgtatatgagagcatccctcccangtccnacaccaatgtattggactggaacgccgact 244
            ||||||||||||||||| | |||  |||| || || ||||| |||||||| |  || || 
Sbjct: 1508 ttgtatatgagagcatcacgccctggtcctacgccgatgtaatggactgggataccaacc 1449

                                   
Query: 245  agctnttntatcctctncacgta 267
            |||| || |||||||| ||||||
Sbjct: 1448 agctcttctatcctctccacgta 1426

>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 16      tcattattgcaggtattacat 36
               |||||||||||||||||||||
Sbjct: 3908044 tcattattgcaggtattacat 3908064

>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    ttggactggaacgccgacta 245
              ||||||||||||||||||||
Sbjct: 273871 ttggactggaacgccgacta 273852

>emb|AL122018.37|HSDJ764D2 Human DNA sequence from clone RP4-764D2 on chromosome 1q42.2-43 Contains
              the 5' end of the NID gene for  nidogen (enactin) protein,
              an aconitase 2, mitochondrial (ACO2) pseudogene, the 5' end
              of the TM7SF1 gene for transmembrane 7 superfamily member 1
              (upregulated in kidney) and two CpG islands, complete
              sequence
          Length = 128811

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     ccgcctgccagtggcctgcc 60
              ||||||||||||||||||||
Sbjct: 101421 ccgcctgccagtggcctgcc 101440

>gb|AY106600.1| Zea mays PCO144935 mRNA sequence
          Length = 432

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 44/53 (83%)
 Strand = Plus / Minus

                                                                
Query: 215 acaccaatgtattggactggaacgccgactagctnttntatcctctncacgta 267
           ||||||||||| || ||||||| |||||| || |  | |||||||| ||||||
Sbjct: 257 acaccaatgtagtgtactggaatgccgaccagttcctctatcctctccacgta 205


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,057,938
Number of Sequences: 3902068
Number of extensions: 1057938
Number of successful extensions: 15039
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14992
Number of HSP's gapped (non-prelim): 46
length of query: 272
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 250
effective length of database: 17,147,199,772
effective search space: 4286799943000
effective search space used: 4286799943000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)