ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11i23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473188.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3396 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||||||| |||| |||||||| ||| | || || || ||||||||||| | Sbjct: 2518 ctttggtgtgacaatattggtgcaacttatctctctgctaaccctgtgtttcatgccaga 2577 Query: 484 actaaacacatcgaagtagatt 505 |||||||||||||||||||||| Sbjct: 2578 actaaacacatcgaagtagatt 2599
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||||||| |||| |||||||| ||| | || || || ||||||||||| | Sbjct: 65126 ctttggtgtgacaatattggtgcaacttatctctctgctaaccctgtgtttcatgccaga 65067 Query: 484 actaaacacatcgaagtagatt 505 |||||||||||||||||||||| Sbjct: 65066 actaaacacatcgaagtagatt 65045
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||||||| |||| |||||||| ||| | || || || ||||||||||| | Sbjct: 25847716 ctttggtgtgacaatattggtgcaacttatctctctgctaaccctgtgtttcatgccaga 25847657 Query: 484 actaaacacatcgaagtagatt 505 |||||||||||||||||||||| Sbjct: 25847656 actaaacacatcgaagtagatt 25847635 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtagatttccatttcgtaagaga 521 ||||| |||||||||||| | || |||||||| ||||| |||| |||||| || ||||| Sbjct: 33448226 aatcctgtgtttcatgctagaacaaaacacatagaagtggattaccattttgtcagaga 33448284
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||||||| |||| |||||||| ||| | || || || ||||||||||| | Sbjct: 23094212 ctttggtgtgacaatattggtgcaacttatctctctgctaaccctgtgtttcatgccaga 23094153 Query: 484 actaaacacatcgaagtagatt 505 |||||||||||||||||||||| Sbjct: 23094152 actaaacacatcgaagtagatt 23094131 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||||||| |||| |||||||| ||| | || || || ||||||||||| | Sbjct: 7484885 ctttggtgtgacaatattggtgcaacttatctctctgctaaccctgtgtttcatgccaga 7484944 Query: 484 actaaacacatcgaagtagatt 505 |||||||||||||||||||||| Sbjct: 7484945 actaaacacatcgaagtagatt 7484966 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 280 tcatggagtgcacggaagcagccaacagtgtcacgatcgtcaactgaagcagagtataaa 339 |||||||||||||| || ||| |||| ||||||||||| || |||||||| |||||| Sbjct: 9923166 tcatggagtgcacgtaaacaggcaactgtgtcacgatcaagtacagaagcagaatataaa 9923107 Query: 340 gccctggcaaatg 352 ||| |||| |||| Sbjct: 9923106 gccttggctaatg 9923094 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagc 341 |||||||||||||||||||| Sbjct: 8480377 actgaagcagagtataaagc 8480396
>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0412C04 Length = 146849 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||||||| |||| |||||||| ||| | || || || ||||||||||| | Sbjct: 44816 ctttggtgtgacaatattggtgcaacttatctctctgctaaccctgtgtttcatgccaga 44875 Query: 484 actaaacacatcgaagtagatt 505 |||||||||||||||||||||| Sbjct: 44876 actaaacacatcgaagtagatt 44897
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||||||| |||| |||||||| ||| | || || || ||||||||||| | Sbjct: 44860 ctttggtgtgacaatattggtgcaacttatctctctgctaaccctgtgtttcatgccaga 44801 Query: 484 actaaacacatcgaagtagatt 505 |||||||||||||||||||||| Sbjct: 44800 actaaacacatcgaagtagatt 44779
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 469 gtgtttcatgctcgcactaaacacatcgaagtagatt 505 ||||||||||||||||| |||||||| |||||||||| Sbjct: 12396722 gtgtttcatgctcgcacaaaacacattgaagtagatt 12396758 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaag 364 ||||||||||| |||||||| ||||||||| |||||| |||| Sbjct: 5964675 actgaagcagaatataaagctttggcaaatgcaacagctgaag 5964717 Score = 42.1 bits (21), Expect = 2.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 470 tgtttcatgctcgcactaaacacatcgaagtagatttccatttcgtaagagagaaggtgg 529 ||||||||||| | || |||||||| ||||| |||| |||||| || ||||| |||||| Sbjct: 31231953 tgtttcatgctagaacaaaacacatagaagtggattaccattttgtcagagaacaggtgg 31232012 Query: 530 c 530 | Sbjct: 31232013 c 31232013
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0011P19 Length = 150811 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 469 gtgtttcatgctcgcactaaacacatcgaagtagatt 505 ||||||||||||||||| |||||||| |||||||||| Sbjct: 82367 gtgtttcatgctcgcacaaaacacattgaagtagatt 82403
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtagatt 505 |||| ||| ||||||||||||||||||||||| || ||||||| Sbjct: 9946710 aatctagtttttcatgctcgcactaaacacatagaggtagatt 9946752 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 27252222 actgaagctgagtataaagctctggctaatgcaacagcagaa 27252263 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtagatttccatttcgtaagagag 522 ||||| |||||||||||| | || |||||||| ||||| |||| |||||| || ||||| Sbjct: 25936751 aatcctgtgtttcatgctagaacaaaacacatagaagtggattaccattttgtcagagaa 25936692 Query: 523 aaggtggc 530 ||||||| Sbjct: 25936691 caggtggc 25936684 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagcc 342 ||||||||||||||||||||| Sbjct: 10670529 actgaagcagagtataaagcc 10670549 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 15322001 tttggtgtgacaatcttggtgcaa 15322024
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtagatt 505 |||| ||| ||||||||||||||||||||||| || ||||||| Sbjct: 93957 aatctagtttttcatgctcgcactaaacacatagaggtagatt 93999
>ref|XM_507316.1| PREDICTED Oryza sativa (japonica cultivar-group), P0623F08.22 patrial mRNA Length = 2841 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 2290 actgaagctgagtataaagctctggctaatgcaacagcagaa 2331
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 11284999 actgaagctgagtataaagctctggctaatgcaacagcagaa 11284958 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 324 tgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 34790761 tgaagctgagtataaagctctggctaatgcaacagcagaa 34790722
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 63952 actgaagctgagtataaagctctggctaatgcaacagcagaa 63911
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 11281762 actgaagctgagtataaagctctggctaatgcaacagcagaa 11281721 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 324 tgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 34880833 tgaagctgagtataaagctctggctaatgcaacagcagaa 34880794
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 13928896 actgaagctgagtataaagctctggctaatgcaacagcagaa 13928937 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaa 488 |||||||| ||||||||||||||||| Sbjct: 2286452 aatccagtttttcatgctcgcactaa 2286477 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 427 tggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgc 479 |||||||| |||||||| || ||||| || || | ||||||||||||||||| Sbjct: 24388789 tggtgtgataatcttggagcgacttatctatcgtcgaatccagtgtttcatgc 24388841
>dbj|AP005770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0065F08 Length = 144091 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 100794 actgaagctgagtataaagctctggctaatgcaacagcagaa 100835
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 75425 actgaagctgagtataaagctctggctaatgcaacagcagaa 75466
>dbj|AK119307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-F11, full insert sequence Length = 2841 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 2290 actgaagctgagtataaagctctggctaatgcaacagcagaa 2331
>gb|BT010869.1| Arabidopsis thaliana At2g23330 gene, complete cds Length = 2331 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 458 cggccaatccagtgtttcatgctcgcactaaacacatcgaa 498 |||| ||||| |||||||||| |||||||||||||||||| Sbjct: 2123 cggcaaatcctgtgtttcatgagcgcactaaacacatcgaa 2163
>gb|AC144716.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0108D09, complete sequence Length = 127371 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 463 aatccagtgtttcatgctcgcactaaaca 491 |||||||| |||||||||||||||||||| Sbjct: 88021 aatccagtttttcatgctcgcactaaaca 87993
>gb|AY140050.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 2463 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 458 cggccaatccagtgtttcatgctcgcactaaacacatcgaa 498 |||| ||||| |||||||||| |||||||||||||||||| Sbjct: 2128 cggcaaatcctgtgtttcatgagcgcactaaacacatcgaa 2168
>gb|AC002391.3| Arabidopsis thaliana chromosome 2 clone T20D16 map CIC06C07, complete sequence Length = 108881 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 458 cggccaatccagtgtttcatgctcgcactaaacacatcgaa 498 |||| ||||| |||||||||| |||||||||||||||||| Sbjct: 23400 cggcaaatcctgtgtttcatgagcgcactaaacacatcgaa 23440
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaaca 491 |||||||| |||||||||||||||||||| Sbjct: 23591464 aatccagtttttcatgctcgcactaaaca 23591492 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtaga 503 ||||| |||||||||||| | |||||||| || |||||||| Sbjct: 3888732 aatccggtgtttcatgctagaactaaacatattgaagtaga 3888692
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 280 tcatggagtgcacggaagcagccaacagtgtcacgatcgtcaactgaagcagagtataaa 339 |||||||||||||| || ||| |||| ||||||||||| || |||||||| |||||| Sbjct: 119801 tcatggagtgcacgtaaacaggcaactgtgtcacgatcaagtacagaagcagaatataaa 119742 Query: 340 gccctggcaaatg 352 ||| |||| |||| Sbjct: 119741 gccttggctaatg 119729
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaaca 491 |||||||| |||||||||||||||||||| Sbjct: 23901400 aatccagtttttcatgctcgcactaaaca 23901428 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtaga 503 ||||| |||||||||||| | |||||||| || |||||||| Sbjct: 3897426 aatccggtgtttcatgctagaactaaacatattgaagtaga 3897386
>ref|XM_470329.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4200 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 324 tgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 3852 tgaagctgagtataaagctctggctaatgcaacagcagaa 3891
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 324 tgaagcagagtataaagccctggcaaatggaacagcagaa 363 |||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 71889 tgaagctgagtataaagctctggctaatgcaacagcagaa 71928
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 211 tgggccggttgcattgatgatcgt 234 |||||||||||||||||||||||| Sbjct: 1590833 tgggccggttgcattgatgatcgt 1590810
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtagatttccatttcgtaagagag 522 ||||| |||||||||||| | || |||||||| ||||| |||| |||||| || ||||| Sbjct: 122538 aatcctgtgtttcatgctagaacaaaacacatagaagtggattaccattttgtcagagaa 122479 Query: 523 aaggtggc 530 ||||||| Sbjct: 122478 caggtggc 122471
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtagatttccatttcgtaagagag 522 ||||| |||||||||||| | || |||||||| ||||| |||| |||||| || ||||| Sbjct: 21628 aatcctgtgtttcatgctagaacaaaacacatagaagtggattaccattttgtcagagaa 21569 Query: 523 aaggtggc 530 ||||||| Sbjct: 21568 caggtggc 21561
>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16, complete sequence Length = 119535 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtagatttccatttcgtaagaga 521 ||||| |||||||||||| | || |||||||| ||||| |||| |||||| || ||||| Sbjct: 94105 aatcctgtgtttcatgctagaacaaaacacatagaagtggattaccattttgtcagaga 94163
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/115 (80%) Strand = Plus / Plus Query: 203 atgcggattgggccggttgcattgatgatcgtaggtccacaggcggctttgcagttttct 262 |||| |||||||| |||||| | |||||| | || ||||| || |||||||| |||| | Sbjct: 16346217 atgctgattgggcaggttgcttagatgataggagatccactggtggctttgctgtttatt 16346276 Query: 263 tcgggcctaacctcatctcatggagtgcacggaagcagccaacagtgtcacgatc 317 | |||||||| || | || ||||||||||| || || || ||||||||| |||| Sbjct: 16346277 tggggcctaatcttgtgtcttggagtgcacgtaaacaacctacagtgtcaagatc 16346331 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtaga 503 ||||| |||||||||||||| ||||| || || |||||||| Sbjct: 16346477 aatcctgtgtttcatgctcgtactaagcatatagaagtaga 16346517
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagccctggcaaatggaacagcagaag 364 ||||||||||| |||||||| ||||||||| |||||| |||| Sbjct: 32563 actgaagcagaatataaagctttggcaaatgcaacagctgaag 32605
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/115 (80%) Strand = Plus / Plus Query: 203 atgcggattgggccggttgcattgatgatcgtaggtccacaggcggctttgcagttttct 262 |||| |||||||| |||||| | |||||| | || ||||| || |||||||| |||| | Sbjct: 34764 atgctgattgggcaggttgcttagatgataggagatccactggtggctttgctgtttatt 34823 Query: 263 tcgggcctaacctcatctcatggagtgcacggaagcagccaacagtgtcacgatc 317 | |||||||| || | || ||||||||||| || || || ||||||||| |||| Sbjct: 34824 tggggcctaatcttgtgtcttggagtgcacgtaaacaacctacagtgtcaagatc 34878 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtaga 503 ||||| |||||||||||||| ||||| || || |||||||| Sbjct: 35024 aatcctgtgtttcatgctcgtactaagcatatagaagtaga 35064
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/115 (80%) Strand = Plus / Plus Query: 203 atgcggattgggccggttgcattgatgatcgtaggtccacaggcggctttgcagttttct 262 |||| |||||||| |||||| | |||||| | || ||||| || |||||||| |||| | Sbjct: 162733 atgctgattgggcaggttgcttagatgataggagatccactggtggctttgctgtttatt 162792 Query: 263 tcgggcctaacctcatctcatggagtgcacggaagcagccaacagtgtcacgatc 317 | |||||||| || | || ||||||||||| || || || ||||||||| |||| Sbjct: 162793 tggggcctaatcttgtgtcttggagtgcacgtaaacaacctacagtgtcaagatc 162847 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtaga 503 ||||| |||||||||||||| ||||| || || |||||||| Sbjct: 162993 aatcctgtgtttcatgctcgtactaagcatatagaagtaga 163033
>emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0102C09, complete sequence Length = 72636 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/115 (80%) Strand = Plus / Plus Query: 203 atgcggattgggccggttgcattgatgatcgtaggtccacaggcggctttgcagttttct 262 |||| |||||||| |||||| | |||||| | || ||||| || |||||||| |||| | Sbjct: 8158 atgctgattgggcaggttgcttagatgataggagatccactggtggctttgctgtttatt 8217 Query: 263 tcgggcctaacctcatctcatggagtgcacggaagcagccaacagtgtcacgatc 317 | |||||||| || | || ||||||||||| || || || ||||||||| |||| Sbjct: 8218 tggggcctaatcttgtgtcttggagtgcacgtaaacaacctacagtgtcaagatc 8272 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtaga 503 ||||| |||||||||||||| ||||| || || |||||||| Sbjct: 8418 aatcctgtgtttcatgctcgtactaagcatatagaagtaga 8458
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtagatttccatttcgtaagaga 521 ||||| |||||||||||| | || |||||||| ||||| |||| |||||| || ||||| Sbjct: 24415 aatcctgtgtttcatgctagaacaaaacacatagaagtggattaccattttgtcagaga 24473
>gb|AC149424.1| Populus trichocarpa clone Pop1-011N15, complete sequence Length = 152544 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 462 caatccagtgtttcatgctcgcactaaaca 491 ||||||||| ||||||||||| |||||||| Sbjct: 125722 caatccagtttttcatgctcgtactaaaca 125693
>gb|AC149297.1| Populus trichocarpa clone Pop1-015H07, complete sequence Length = 131790 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 462 caatccagtgtttcatgctcgcactaaaca 491 ||||||||| ||||||||||| |||||||| Sbjct: 10149 caatccagtttttcatgctcgtactaaaca 10120
>gb|AC149295.1| Populus trichocarpa clone Pop1-008L01, complete sequence Length = 101981 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 462 caatccagtgtttcatgctcgcactaaaca 491 ||||||||| ||||||||||| |||||||| Sbjct: 76531 caatccagtttttcatgctcgtactaaaca 76502
>emb|BX294149.1| Pirellula sp. strain 1 complete genome; segment 17/24 Length = 314250 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 535 aaagcattgaaagtgcggttca 556 |||||||||||||||||||||| Sbjct: 116054 aaagcattgaaagtgcggttca 116033
>gb|AC182685.2| Populus trichocarpa clone Pop1-37K2, complete sequence Length = 69711 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgca 484 |||||||||||||||||||||| Sbjct: 41074 aatccagtgtttcatgctcgca 41095
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.58 Identities = 67/82 (81%) Strand = Plus / Plus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||| ||| | || |||||||| | || || || || |||||||||||||| Sbjct: 1576664 ctttggtgtgataatttgggtgcaacttatatgactgcaaaccccgtgtttcatgctcgg 1576723 Query: 484 actaaacacatcgaagtagatt 505 || |||||||| ||||| |||| Sbjct: 1576724 acgaaacacattgaagttgatt 1576745 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 13794149 tttggtgtgacaatcttggggcaa 13794126 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagc 341 |||||||||||||||||||| Sbjct: 1576562 actgaagcagagtataaagc 1576581
>dbj|AP005776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0018G11 Length = 121084 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaa 488 |||||||| ||||||||||||||||| Sbjct: 22529 aatccagtttttcatgctcgcactaa 22554
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 463 aatccagtgtttcatgctcgcactaa 488 |||||||| ||||||||||||||||| Sbjct: 73401 aatccagtttttcatgctcgcactaa 73426
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.58 Identities = 67/82 (81%) Strand = Plus / Plus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||| ||| | || |||||||| | || || || || |||||||||||||| Sbjct: 1576664 ctttggtgtgataatttgggtgcaacttatatgactgcaaaccccgtgtttcatgctcgg 1576723 Query: 484 actaaacacatcgaagtagatt 505 || |||||||| ||||| |||| Sbjct: 1576724 acgaaacacattgaagttgatt 1576745 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 13748429 tttggtgtgacaatcttggggcaa 13748406 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagc 341 |||||||||||||||||||| Sbjct: 1576562 actgaagcagagtataaagc 1576581
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 44.1 bits (22), Expect = 0.58 Identities = 67/82 (81%) Strand = Plus / Minus Query: 424 ctttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgc 483 ||||||||||| ||| | || |||||||| | || || || || |||||||||||||| Sbjct: 49068 ctttggtgtgataatttgggtgcaacttatatgactgcaaaccccgtgtttcatgctcgg 49009 Query: 484 actaaacacatcgaagtagatt 505 || |||||||| ||||| |||| Sbjct: 49008 acgaaacacattgaagttgatt 48987 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 actgaagcagagtataaagc 341 |||||||||||||||||||| Sbjct: 49170 actgaagcagagtataaagc 49151
>gb|AC134044.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019D06 map S10616A, complete sequence Length = 182486 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 463 aatccagtgtttcatgctcgcactaaacacatcgaagtaga 503 ||||| |||||||||||| | |||||||| || |||||||| Sbjct: 16358 aatccggtgtttcatgctagaactaaacatattgaagtaga 16318
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 203 atgcggattgggccggttgcattgatgatcgtaggtccacaggcggctttgcagttttct 262 |||| |||||||| || || ||||||||| | || |||||||| || ||||| || |||| Sbjct: 82016 atgcagattgggcaggatgtattgatgatagaagatccacaggtggatttgctgtattct 82075 Query: 263 tcgggcctaacctcatctcatggagtgca 291 | || | ||||| || |||||||||||| Sbjct: 82076 tgggatcaaaccttatatcatggagtgca 82104
>gb|AC121829.3| Mus musculus BAC clone RP23-480P21 from chromosome 5, complete sequence Length = 197131 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 cattcacaaagcccttgacaa 604 ||||||||||||||||||||| Sbjct: 136620 cattcacaaagcccttgacaa 136600
>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE Length = 123473 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 cacgatcgtcaactgaagcagagta 335 ||||||| ||||||||||||||||| Sbjct: 103213 cacgatcatcaactgaagcagagta 103237
>emb|AL445984.6| Human DNA sequence from clone RP11-360A9 on chromosome 13 Contains a novel gene, complete sequence Length = 181419 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 acatcgaagtagatttccatt 511 ||||||||||||||||||||| Sbjct: 86318 acatcgaagtagatttccatt 86298
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete sequence Length = 120132 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 275 tcatctcatggagtgcacggaagcagccaacagtgtc 311 |||||||||||||||| |||||||||| || ||||| Sbjct: 70079 tcatctcatggagtgctaggaagcagcctacggtgtc 70043
>emb|BX842652.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 7/11 Length = 346148 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 365 caacatggttgcagtccttgt 385 ||||||||||||||||||||| Sbjct: 131151 caacatggttgcagtccttgt 131131
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 gccggttgcattgatgatcgt 234 ||||||||||||||||||||| Sbjct: 5587636 gccggttgcattgatgatcgt 5587656
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 42.1 bits (21), Expect = 2.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 470 tgtttcatgctcgcactaaacacatcgaagtagatttccatttcgtaagagagaaggtgg 529 ||||||||||| | || |||||||| ||||| |||| |||||| || ||||| |||||| Sbjct: 158298 tgtttcatgctagaacaaaacacatagaagtggattaccattttgtcagagaacaggtgg 158357 Query: 530 c 530 | Sbjct: 158358 c 158358
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1792_D02 Length = 141649 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 427 tggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgc 479 |||||||| |||||||| || ||||| || || | ||||||||||||||||| Sbjct: 16995 tggtgtgataatcttggagcgacttatctatcgtcgaatccagtgtttcatgc 17047
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagcc 342 ||||||||||||||||||||| Sbjct: 98169 actgaagcagagtataaagcc 98189
>emb|AJ341234.1|HSA341234 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NA15RS Length = 683 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 agagaaggtggccatgaaagc 539 ||||||||||||||||||||| Sbjct: 678 agagaaggtggccatgaaagc 658
>gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, complete sequence Length = 183724 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gcaaatggaacagcagaagc 365 |||||||||||||||||||| Sbjct: 44301 gcaaatggaacagcagaagc 44282
>ref|NM_195277.1| Oryza sativa (japonica cultivar-group) putative gag-pol polyprotein (OSJNBb0038H12.4), mRNA Length = 2283 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tccacaggcggctttgcagttttc 261 |||||||| ||||||||||||||| Sbjct: 2140 tccacaggaggctttgcagttttc 2163
>gb|AC111100.13| Mus musculus chromosome 3, clone RP23-179J8, complete sequence Length = 216852 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aactgaagcagagtataaag 340 |||||||||||||||||||| Sbjct: 179389 aactgaagcagagtataaag 179370
>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence Length = 173764 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 27555 tttggtgtgacaatcttggtgcaa 27532
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tccacaggcggctttgcagttttc 261 |||||||| ||||||||||||||| Sbjct: 14793 tccacaggaggctttgcagttttc 14816
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 117347 tttggtgtgacaatcttggtgcaa 117324
>gb|AC182697.2| Populus trichocarpa clone Pop1-6M9, complete sequence Length = 58709 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 actgaagcagagtataaagc 341 |||||||||||||||||||| Sbjct: 46882 actgaagcagagtataaagc 46863
>emb|AL121872.12|HSB348B13 Human DNA sequence from clone RP13-348B13 on chromosome X Contains a pseudogene similar to part of SRI (sorcin) and a novel gene, complete sequence Length = 142689 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 agcagagtataaagccctgg 346 |||||||||||||||||||| Sbjct: 14147 agcagagtataaagccctgg 14166
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ccacaggcggctttgcagtt 258 |||||||||||||||||||| Sbjct: 4467166 ccacaggcggctttgcagtt 4467147
>gb|AC182663.2| Populus trichocarpa clone Pop1-16M7, complete sequence Length = 77392 Score = 40.1 bits (20), Expect = 9.0 Identities = 53/64 (82%) Strand = Plus / Plus Query: 425 tttggtgtgacaatcttggcgcaacttacctcacggccaatccagtgtttcatgctcgca 484 |||||||||| |||||||| || || || ||| |||| ||||| | ||||||||||| | Sbjct: 18206 tttggtgtgataatcttggtgcgacctatctctcggcgaatcctatctttcatgctcgta 18265 Query: 485 ctaa 488 |||| Sbjct: 18266 ctaa 18269
>gb|AC159542.8| Mus musculus 10 BAC RP23-137B10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198525 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 aaggtggccatgaaagcatt 542 |||||||||||||||||||| Sbjct: 129748 aaggtggccatgaaagcatt 129767
>ref|NM_077345.2| Caenorhabditis elegans ZC504.3 (ZC504.3) mRNA, complete cds Length = 2589 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 tctcctcagctgaccaggtt 576 |||||||||||||||||||| Sbjct: 1968 tctcctcagctgaccaggtt 1949
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 tccacaggcggctttgcagttttc 261 |||||||| ||||||||||||||| Sbjct: 5909090 tccacaggaggctttgcagttttc 5909067
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 17280613 tttggtgtgacaatcttggggcaa 17280636
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 5979773 tttggtgtgacaatcttggtgcaa 5979750
>gb|AC010144.4|AC010144 Homo sapiens BAC clone RP11-309M4 from Y, complete sequence Length = 166347 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 agcagagtataaagccctgg 346 |||||||||||||||||||| Sbjct: 161408 agcagagtataaagccctgg 161427
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0640E12 Length = 167353 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 85738 tttggtgtgacaatcttggggcaa 85761
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0062G05 Length = 152802 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 107632 tttggtgtgacaatcttggtgcaa 107655
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0092H22 Length = 165194 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 actgaagcagagtataaagc 341 |||||||||||||||||||| Sbjct: 95078 actgaagcagagtataaagc 95097
>emb|AL935071.4|CNS08CCN Oryza sativa chromosome 12, . BAC OSJNBb0016C24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 87778 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 57456 tttggtgtgacaatcttggggcaa 57433
>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145118 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 127750 tttggtgtgacaatcttggggcaa 127727
>dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXE2 Length = 86854 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 464 atccagtgtttcatgctcgcactaaaca 491 |||| ||||||||||||||||| ||||| Sbjct: 70701 atccggtgtttcatgctcgcaccaaaca 70674
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 7577 tttggtgtgacaatcttggtgcaa 7600
>emb|Z50029.1|CEZC504 Caenorhabditis elegans Cosmid ZC504, complete sequence Length = 37750 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 tctcctcagctgaccaggtt 576 |||||||||||||||||||| Sbjct: 15641 tctcctcagctgaccaggtt 15660
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 tccacaggcggctttgcagttttc 261 |||||||| ||||||||||||||| Sbjct: 5910276 tccacaggaggctttgcagttttc 5910253
>gb|AC115832.14| Mus musculus chromosome 3, clone RP24-137P14, complete sequence Length = 139149 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aactgaagcagagtataaag 340 |||||||||||||||||||| Sbjct: 135900 aactgaagcagagtataaag 135919
>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155451 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttggtgtgacaatcttggcgcaa 448 ||||||||||||||||||| |||| Sbjct: 109808 tttggtgtgacaatcttggggcaa 109785
>emb|CT010452.9| Mouse DNA sequence from clone RP23-424B20 on chromosome 12, complete sequence Length = 199987 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaggcaccgtgtctacagga 156 |||||||||||||||||||| Sbjct: 48175 aaggcaccgtgtctacagga 48156 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,969,220 Number of Sequences: 3902068 Number of extensions: 4969220 Number of successful extensions: 85430 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 84449 Number of HSP's gapped (non-prelim): 982 length of query: 659 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 636 effective length of database: 17,143,297,704 effective search space: 10903137339744 effective search space used: 10903137339744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
