ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ507097.1|HVU507097 Hordeum vulgare mRNA for NBS-LRR diseas... 1261 0.0
2emb|AJ507091.1|HVU507091 Hordeum vulgare partial mRNA for NBS-LR... 704 0.0
3emb|AJ507088.1|HVU507088 Hordeum vulgare partial mRNA for NBS-LR... 561 e-156
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
5dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
6dbj|AK100253.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
7dbj|AK099567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
8dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
9dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
10dbj|AK069923.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
11ref|XM_473970.1| Oryza sativa (japonica cultivar-group), predic... 50 0.009
12emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 50 0.009
13gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, co... 50 0.009
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
15gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, gen... 44 0.57
16gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, com... 44 0.57
17gb|AC135735.2| Homo sapiens chromosome 15, clone RP11-1270F20, c... 44 0.57
18gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, com... 44 0.57
19gb|AC127482.10| Homo sapiens chromosome 15, clone CTD-2547M4, co... 44 0.57
20gb|AC011295.3| Homo sapiens BAC clone RP11-96J23 from 15, comple... 44 0.57
21gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 1... 44 0.57
22gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, c... 42 2.2
23gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, com... 42 2.2
24gb|AC147131.2| Pan troglodytes BAC clone CH251-403A11 from Y, co... 42 2.2
25gb|AC117805.8| Mus musculus chromosome 19, clone RP24-565L9, com... 42 2.2
26emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 42 2.2
27gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 2.2
28gb|AY652746.1| Ehrlichia ruminantium strain Gardel Map1 cluster,... 42 2.2
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
30gb|AC023274.2|AC023274 Homo sapiens clone RP11-307L15, complete ... 42 2.2
31gb|AC007562.4|AC007562 Homo sapiens BAC clone RP11-497C14 from Y... 42 2.2
32ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 42 2.2
33gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
34emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial se... 42 2.2
35emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb... 42 2.2
36ref|NM_186251.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
37gb|AC162902.4| Mus musculus BAC clone RP23-448D23 from chromosom... 40 8.9
38gb|AC164641.5| Mus musculus BAC clone RP23-393F10 from chromosom... 40 8.9
39gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.9
40ref|XM_538441.2| PREDICTED: Canis familiaris similar to TGF beta... 40 8.9
41emb|BX901925.10| Zebrafish DNA sequence from clone DKEYP-86C11 i... 40 8.9
42emb|Z97632.3|HS196E23 Human DNA sequence from clone RP1-196E23 o... 40 8.9
43emb|BX571819.6| Zebrafish DNA sequence from clone CH211-105H3 in... 40 8.9
44emb|BX248323.8| Zebrafish DNA sequence from clone CH211-199J6, c... 40 8.9
45dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
46dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
47gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
48gb|AC078815.22| Homo sapiens 12q BAC RP11-766N7 (Roswell Park Ca... 40 8.9
49gb|AC074286.5| Homo sapiens BAC clone RP11-83I14 from 2, complet... 40 8.9
50dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
51dbj|AK106498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
52emb|BX004975.9| Zebrafish DNA sequence from clone DKEY-14B16, co... 40 8.9
53gb|AC000115.1|HSAC000115 Human BAC clone GS188P18, complete sequ... 40 8.9
54gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 8.9 
>emb|AJ507097.1|HVU507097 Hordeum vulgare mRNA for NBS-LRR disease resistance protein homologue
            (rga S-9217 gene)
          Length = 5145

 Score = 1261 bits (636), Expect = 0.0
 Identities = 647/650 (99%), Gaps = 1/650 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttctgtttttgcgactngaagatgagagatctcna-ggtccataagaatgtgcaagtcca 59
            |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 5031 ttctgtttttgcgactagaagatgagagatctccaaggtccataagaatgtgcaagtcca 4972

                                                                        
Query: 60   agacagatcccatatttatgtaggagataccacccaaggccatggcatccgaactgctcg 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4971 agacagatcccatatttatgtaggagataccacccaaggccatggcatccgaactgctcg 4912

                                                                        
Query: 120  tgtatgcaaaaaacttcaaggataacagcacttctataacttcatgccagaggccagttt 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4911 tgtatgcaaaaaacttcaaggataacagcacttctataacttcatgccagaggccagttt 4852

                                                                        
Query: 180  agtaatggatggattctatagtctgggaccttgtgttcttggatagagagagaactggat 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4851 agtaatggatggattctatagtctgggaccttgtgttcttggatagagagagaactggat 4792

                                                                        
Query: 240  caacaaggctaggctagaagaatgtacaaatccaagaagacctcttggattagccttagt 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4791 caacaaggctaggctagaagaatgtacaaatccaagaagacctcttggattagccttagt 4732

                                                                        
Query: 300  agtctatgattattggaatggttccttttaacttgcagcactgccttttaagctcctcgc 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4731 agtctatgattattggaatggttccttttaacttgcagcactgccttttaagctcctcgc 4672

                                                                        
Query: 360  tgatgccaccacaaacttctaatttccgtagtgaacttggcaggccgtccttgggcagag 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4671 tgatgccaccacaaacttctaatttccgtagtgaacttggcaggccgtccttgggcagag 4612

                                                                        
Query: 420  atttgatggcaggacagtctttgatatctagttcttgcagagaacttggcagtccgtcct 479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4611 atttgatggcaggacagtctttgatatctagttcttgcagagaacttggcagtccgtcct 4552

                                                                        
Query: 480  tgggcagcaacctgatggctggaaacttccaaatccgtaatatcttgaggctggcaagct 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4551 tgggcagcaacctgatggctggaaacttccaaatccgtaatatcttgaggctggcaagct 4492

                                                                        
Query: 540  gggctaaccctgcagggaggcgctgcagcttcctacaattccaaaaaacgagtttctgga 599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4491 gggctaaccctgcagggaggcgctgcagcttcctacaattccaaaaaacgagtttctgga 4432

                                                              
Query: 600  gagaattgaggaggtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4431 gagaattgaggaggtgaagggcctcctcgtgctcctctgtgaagcgctcc 4382
to top
>emb|AJ507091.1|HVU507091 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein
            homologue (rga S-226 gene)
          Length = 5451

 Score =  704 bits (355), Expect = 0.0
 Identities = 405/419 (96%), Gaps = 2/419 (0%)
 Strand = Plus / Minus

                                                                        
Query: 69   ccatatttatgtaggagataccacccaaggccatggcatccgaactgctcgtgt-atgca 127
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5255 ccatatttatgtaggagataccacccaaggccatggcatccgaactgctcgtgttatgca 5196

                                                                        
Query: 128  aaaaacttcaaggataacagcacttctataacttcatgccagaggccagtttagtaatgg 187
            |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 5195 aaaaacttcaaggataacagcacttctacaacttcatgccagaggccggtttagtaatgg 5136

                                                                        
Query: 188  atggattctatagtctgggaccttgtgttcttggatagagagagaactggatcaacaagg 247
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5135 atggattctatagtctgggaccttctgttcttggatagagagagaactggatcaacaagg 5076

                                                                        
Query: 248  ctaggctagaagaatgtacaaatccaagaagacctcttggattagccttagtagtctatg 307
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5075 ctaggctagaa-aatgtacaaatccaagaagacctcttggattagccttagtagtctatg 5017

                                                                        
Query: 308  attattggaatggttccttttaacttgcagcactgccttttaagctcctcgctgatgcca 367
            |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 5016 attattggaatggttccttttaacttgcggcactgccttttaagttcctcgctgatgcca 4957

                                                                        
Query: 368  ccacaaacttctaatttccgtagtgaacttggcaggccgtccttgggcagagatttgatg 427
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4956 tcacaaacttctaatttccgtagtgaacttggcaggccgtccttgggcagagatttgatg 4897

                                                                       
Query: 428  gcaggacagtctttgatatctagttcttgcagagaacttggcagtccgtccttgggcag 486
            ||||| |||| | |||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 4896 gcagggcagtttctgatctctagttcttgtagagaacttggcaggccgtccttgggcag 4838



 Score =  426 bits (215), Expect = e-116
 Identities = 251/263 (95%)
 Strand = Plus / Minus

                                                                        
Query: 387  gtagtgaacttggcaggccgtccttgggcagagatttgatggcaggacagtctttgatat 446
            |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4868 gtagagaacttggcaggccgtccttgggcagagatttgatggcaggacagactttgatat 4809

                                                                        
Query: 447  ctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctggaaact 506
            ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || 
Sbjct: 4808 ctagttcttgcagagaacttggcagtccgtccttgggcagcgacctgatggctggacacc 4749

                                                                        
Query: 507  tccaaatccgtaatatcttgaggctggcaagctgggctaaccctgcagggaggcgctgca 566
             ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4748 accaaatccgtaatatcttgaggctggcaagccgggctaaccctgcagggaggcgctgca 4689

                                                                        
Query: 567  gcttcctacaattccaaaaaacgagtttctggagagaattgaggaggtgaagggcctcct 626
            |||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 4688 gcttcccacaatcccgaaaaaagagttcctggagagaattgaggaggtgaagggcctcct 4629

                                   
Query: 627  cgtgctcctctgtgaagcgctcc 649
            |||||||||||||||||||||||
Sbjct: 4628 cgtgctcctctgtgaagcgctcc 4606



 Score =  107 bits (54), Expect = 5e-20
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                        
Query: 6    tttttgcgactngaagatgagagatctcnaggtccataagaatgtgcaagtccaagacag 65
            ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 5451 tttttgcgactagaagatgagagatctccaagtccataagaatgtgcaagtccaagacag 5392

                
Query: 66   atcc 69
            ||||
Sbjct: 5391 atcc 5388
to top
>emb|AJ507088.1|HVU507088 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein
            homologue (rga S-112 gene)
          Length = 4654

 Score =  561 bits (283), Expect = e-156
 Identities = 346/367 (94%)
 Strand = Plus / Minus

                                                                        
Query: 283  cttggattagccttagtagtctatgattattggaatggttccttttaacttgcagcactg 342
            |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 4453 cttggattagccttagtagtctttgattattggaatggttccttttaacttgcggcactg 4394

                                                                        
Query: 343  ccttttaagctcctcgctgatgccaccacaaacttctaatttccgtagtgaacttggcag 402
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 4393 ccttttaagctcctcgctgatggcaccacaaacttctaatttccgtagtgaacttgacag 4334

                                                                        
Query: 403  gccgtccttgggcagagatttgatggcaggacagtctttgatatctagttcttgcagaga 462
            ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4333 gccgtccctgggcagagatttgatggcaggacagtctttgatctctagttcttgcagaga 4274

                                                                        
Query: 463  acttggcagtccgtccttgggcagcaacctgatggctggaaacttccaaatccgtaatat 522
            ||||||||||||||||||||||||| | |||||| ||| | |   |||||||||||||||
Sbjct: 4273 acttggcagtccgtccttgggcagcgagctgatgtctgtacaacaccaaatccgtaatat 4214

                                                                        
Query: 523  cttgaggctggcaagctgggctaaccctgcagggaggcgctgcagcttcctacaattcca 582
            |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 4213 cttgaggctggcaagctgggttaaccctgcagggaggcgctgcagcttcccacatttcca 4154

                                                                        
Query: 583  aaaaacgagtttctggagagaattgaggaggtgaagggcctcctcgtgctcctctgtgaa 642
            ||||  ||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4153 aaaagtgagtacctggagagaattgaggaggtgaagggcctcctcgtgctcctctgtgaa 4094

                   
Query: 643  gcgctcc 649
            |||||||
Sbjct: 4093 gcgctcc 4087



 Score =  317 bits (160), Expect = 3e-83
 Identities = 170/174 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttctgtttttgcgactngaagatgagagatctcnaggtccataagaatgtgcaagtccaa 60
            |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 4637 ttctgtttttgcgactagaagatgagagatctccaagtccataagaatgtgcaagtccaa 4578

                                                                        
Query: 61   gacagatcccatatttatgtaggagataccacccaaggccatggcatccgaactgctcgt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4577 gacagatcccatatttatgtaggagataccacccaaggccatggcatccgaactgctcgt 4518

                                                                  
Query: 121  gtatgcaaaaaacttcaaggataacagcacttctataacttcatgccagaggcc 174
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4517 gtatgcaaaaaacttcaaggataacagcacttctacaacttcatgccagaggcc 4464
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                            
Query: 301      gtctatgattattggaatggttccttttaacttgcagcactgccttttaagctcctcgct 360
                |||| |||| ||||||||||||||| ||| ||||| |||||||||||| |||||||||||
Sbjct: 29425262 gtctttgatgattggaatggttcctcttagcttgcggcactgccttttgagctcctcgct 29425321

                 
Query: 361      g 361
                |
Sbjct: 29425322 g 29425322



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 311      attggaatggttccttttaacttgcagcactgccttttaagctcctcgct 360
                |||| ||| |||||||||| ||||| |||||||||||| ||||| |||||
Sbjct: 22971590 attgcaattgttccttttagcttgcggcactgccttttgagctcttcgct 22971639



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                             
Query: 314      ggaatggttccttttaacttgcagcactgccttttaagctcctcg 358
                ||||| |||||| ||| ||||| |||||||||||| |||||||||
Sbjct: 29403345 ggaattgttcctcttagcttgcggcactgccttttgagctcctcg 29403389



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 314      ggaatggttccttttaacttgcagcactgccttttaagctcctcg 358
                |||||||||||| ||| ||| | |||||| ||||| |||||||||
Sbjct: 29411398 ggaatggttcctcttagcttacggcactgtcttttgagctcctcg 29411442
to top
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0621D05
          Length = 180250

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                          
Query: 301    gtctatgattattggaatggttccttttaacttgcagcactgccttttaagctcctcgct 360
              |||| |||| ||||||||||||||| ||| ||||| |||||||||||| |||||||||||
Sbjct: 136143 gtctttgatgattggaatggttcctcttagcttgcggcactgccttttgagctcctcgct 136202

               
Query: 361    g 361
              |
Sbjct: 136203 g 136203



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 314    ggaatggttccttttaacttgcagcactgccttttaagctcctcg 358
              ||||| |||||| ||| ||||| |||||||||||| |||||||||
Sbjct: 114226 ggaattgttcctcttagcttgcggcactgccttttgagctcctcg 114270



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 314    ggaatggttccttttaacttgcagcactgccttttaagctcctcg 358
              |||||||||||| ||| ||| | |||||| ||||| |||||||||
Sbjct: 122279 ggaatggttcctcttagcttacggcactgtcttttgagctcctcg 122323
to top
>dbj|AK100253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061C20, full
            insert sequence
          Length = 2552

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                        
Query: 301  gtctatgattattggaatggttccttttaacttgcagcactgccttttaagctcctcgct 360
            |||| |||| ||||||||||||||| ||| ||||| |||||||||||| |||||||||||
Sbjct: 1356 gtctttgatgattggaatggttcctcttagcttgcggcactgccttttgagctcctcgct 1297

             
Query: 361  g 361
            |
Sbjct: 1296 g 1296
to top
>dbj|AK099567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034N02, full
            insert sequence
          Length = 4016

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                        
Query: 301  gtctatgattattggaatggttccttttaacttgcagcactgccttttaagctcctcgct 360
            |||| |||| ||||||||||||||| ||| ||||| |||||||||||| |||||||||||
Sbjct: 3180 gtctttgatgattggaatggttcctcttagcttgcggcactgccttttgagctcctcgct 3121

             
Query: 361  g 361
            |
Sbjct: 3120 g 3120
to top
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502H06
          Length = 165630

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 311    attggaatggttccttttaacttgcagcactgccttttaagctcctcgct 360
              |||| ||| |||||||||| ||||| |||||||||||| ||||| |||||
Sbjct: 146412 attgcaattgttccttttagcttgcggcactgccttttgagctcttcgct 146461
to top
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652A05
          Length = 150455

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 311   attggaatggttccttttaacttgcagcactgccttttaagctcctcgct 360
             |||| ||| |||||||||| ||||| |||||||||||| ||||| |||||
Sbjct: 38075 attgcaattgttccttttagcttgcggcactgccttttgagctcttcgct 38124
to top
>dbj|AK069923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035K08, full
           insert sequence
          Length = 4256

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 445 atctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctgga 502
           ||||||||||||||| ||||| || || ||  ||||||||||| ||||||||| ||||
Sbjct: 737 atctagttcttgcagtgaactggggaggccacccttgggcagcgacctgatggatgga 680



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 606 tgaggaggtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
           ||||||| |||||||||||||| |||||||   |||||||||||
Sbjct: 576 tgaggagctgaagggcctcctcttgctccttcatgaagcgctcc 533



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 445  atctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctgga 502
            ||||||||||||||| ||||| || || ||  ||||||||||| ||| ||||| ||||
Sbjct: 1976 atctagttcttgcagtgaactggggaggccacccttgggcagcgaccggatggatgga 1919
to top
>ref|XM_473970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 6342

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 597  ggagagaattgaggaggtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
            |||||||  ||||||| |||||||||||||| |||||||   |||||||||||
Sbjct: 4423 ggagagaggtgaggagctgaagggcctcctcttgctccttcatgaagcgctcc 4371



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 445  atctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctgga 502
            ||||||||||||||| ||||| || || ||  ||||||||||| ||| ||||| ||||
Sbjct: 5343 atctagttcttgcagtgaactggggaggccacccttgggcagcgaccggatggatgga 5286



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 445  atctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctgga 502
            ||||||||||||||| ||||| || || ||  ||||||||||| ||| ||||| ||||
Sbjct: 4575 atctagttcttgcagtgaactggggaggccacccttgggcagcgaccggatggatgga 4518
to top
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
             complete sequence
          Length = 166951

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 597   ggagagaattgaggaggtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
             |||||||  ||||||| |||||||||||||| |||||||   |||||||||||
Sbjct: 65977 ggagagaggtgaggagctgaagggcctcctcttgctccttcatgaagcgctcc 65925



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 445   atctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctgga 502
             ||||||||||||||| ||||| || || ||  ||||||||||| ||| ||||| ||||
Sbjct: 68992 atctagttcttgcagtgaactggggaggccacccttgggcagcgaccggatggatgga 68935



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 445   atctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctgga 502
             ||||||||||||||| ||||| || || ||  ||||||||||| ||| ||||| ||||
Sbjct: 66129 atctagttcttgcagtgaactggggaggccacccttgggcagcgaccggatggatgga 66072
to top
>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence
          Length = 180202

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 299   tagtctatgattattggaatggttccttt 327
             |||||||| ||||||||||||||||||||
Sbjct: 74634 tagtctatcattattggaatggttccttt 74606
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 597      ggagagaattgaggaggtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
                |||||||  ||||||| |||||||||||||| |||||||   |||||||||||
Sbjct: 31893111 ggagagaggtgaggagctgaagggcctcctcttgctccttcatgaagcgctcc 31893059



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 445      atctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctgga 502
                ||||||||||||||| ||||| || || ||  ||||||||||| ||| ||||| ||||
Sbjct: 31896126 atctagttcttgcagtgaactggggaggccacccttgggcagcgaccggatggatgga 31896069



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 445      atctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctgga 502
                ||||||||||||||| ||||| || || ||  ||||||||||| ||| ||||| ||||
Sbjct: 31893263 atctagttcttgcagtgaactggggaggccacccttgggcagcgaccggatggatgga 31893206
to top
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence
          Length = 64224

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 445   atctagttcttgcagagaacttggcagtccgtccttgggcagcaacctgatggctgga 502
             ||||||||||||||| ||||| || || ||  ||||||||||| ||| ||||| ||||
Sbjct: 53929 atctagttcttgcagtgaactggggaggccacccttgggcagcgaccggatggatgga 53872
to top
>gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, complete sequence
          Length = 157246

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 302    tctatgattattggaatggttccttt 327
              ||||| ||||||||||||||||||||
Sbjct: 125068 tctatcattattggaatggttccttt 125043
to top
>gb|AC135735.2| Homo sapiens chromosome 15, clone RP11-1270F20, complete sequence
          Length = 175310

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 302  tctatgattattggaatggttccttt 327
            ||||| ||||||||||||||||||||
Sbjct: 8289 tctatcattattggaatggttccttt 8314
to top
>gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, complete sequence
          Length = 119922

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 614   tgaagggcctcctcgtgctcct 635
             ||||||||||||||||||||||
Sbjct: 63154 tgaagggcctcctcgtgctcct 63133
to top
>gb|AC127482.10| Homo sapiens chromosome 15, clone CTD-2547M4, complete sequence
          Length = 193680

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 302  tctatgattattggaatggttccttt 327
            ||||| ||||||||||||||||||||
Sbjct: 9463 tctatcattattggaatggttccttt 9488
to top
>gb|AC011295.3| Homo sapiens BAC clone RP11-96J23 from 15, complete sequence
          Length = 148698

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 302  tctatgattattggaatggttccttt 327
            ||||| ||||||||||||||||||||
Sbjct: 9017 tctatcattattggaatggttccttt 8992
to top
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence
          Length = 157200

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 302    tctatgattattggaatggttccttt 327
              ||||| ||||||||||||||||||||
Sbjct: 146050 tctatcattattggaatggttccttt 146025
to top
>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence
          Length = 168677

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 429  caggacagtctttgatatcta 449
            |||||||||||||||||||||
Sbjct: 4310 caggacagtctttgatatcta 4290
to top
>gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, complete sequence
          Length = 188138

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 299   tagtctatgattattggaatggttccttt 327
             |||||||| ||||||| ||||||||||||
Sbjct: 68130 tagtctatcattattgtaatggttccttt 68158
to top
>gb|AC147131.2| Pan troglodytes BAC clone CH251-403A11 from Y, complete sequence
          Length = 168159

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 299    tagtctatgattattggaatggttccttt 327
              |||||||| ||||||| ||||||||||||
Sbjct: 100417 tagtctatcattattgtaatggttccttt 100445
to top
>gb|AC117805.8| Mus musculus chromosome 19, clone RP24-565L9, complete sequence
          Length = 156701

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 429   caggacagtctttgatatcta 449
             |||||||||||||||||||||
Sbjct: 46156 caggacagtctttgatatcta 46176
to top
>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 435     agtctttgatatctagttctt 455
               |||||||||||||||||||||
Sbjct: 1448537 agtctttgatatctagttctt 1448517
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 299     tagtctatgattattggaatggttccttt 327
               |||||||| ||||||| ||||||||||||
Sbjct: 5701399 tagtctatcattattgtaatggttccttt 5701427
to top
>gb|AY652746.1| Ehrlichia ruminantium strain Gardel Map1 cluster, complete sequence
          Length = 21115

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 435   agtctttgatatctagttctt 455
             |||||||||||||||||||||
Sbjct: 10048 agtctttgatatctagttctt 10028
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 613      gtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
                ||||||||||| ||| ||||||| |||||||| ||||
Sbjct: 17799851 gtgaagggccttctcttgctcctttgtgaagcactcc 17799887



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 613      gtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
                ||||||||||| ||| ||||||| |||||||| ||||
Sbjct: 17777330 gtgaagggccttctcttgctcctttgtgaagcactcc 17777366



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 613      gtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
                ||||||||||| ||| ||||||| |||||||| ||||
Sbjct: 17749278 gtgaagggccttctcttgctcctttgtgaagcactcc 17749314



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 331      cttgcagcactgccttttaagctcctcg 358
                ||||| |||||||||||| |||||||||
Sbjct: 17799425 cttgcggcactgcctttttagctcctcg 17799452



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 331      cttgcagcactgccttttaagctcctcg 358
                ||||| |||||||||||| |||||||||
Sbjct: 17776904 cttgcggcactgcctttttagctcctcg 17776931



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 331      cttgcagcactgccttttaagctcctcg 358
                ||||| |||||||||||| |||||||||
Sbjct: 17748018 cttgcggcactgcctttttagctcctcg 17748045
to top
>gb|AC023274.2|AC023274 Homo sapiens clone RP11-307L15, complete sequence
          Length = 137682

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 299   tagtctatgattattggaatggttccttt 327
             |||||||| ||||||| ||||||||||||
Sbjct: 91258 tagtctatcattattgcaatggttccttt 91286
to top
>gb|AC007562.4|AC007562 Homo sapiens BAC clone RP11-497C14 from Y, complete sequence
          Length = 137077

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 299  tagtctatgattattggaatggttccttt 327
            |||||||| ||||||| ||||||||||||
Sbjct: 9225 tagtctatcattattgcaatggttccttt 9197
to top
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 299     tagtctatgattattggaatggttccttt 327
               |||||||| ||||||| ||||||||||||
Sbjct: 3709145 tagtctatcattattgcaatggttccttt 3709117



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 299     tagtctatgattattggaatggttccttt 327
               |||||||| ||||||| ||||||||||||
Sbjct: 2339227 tagtctatcattattgcaatggttccttt 2339255
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 613      gtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
                ||||||||||| ||| ||||||| |||||||| ||||
Sbjct: 17726170 gtgaagggccttctcttgctcctttgtgaagcactcc 17726206



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 613      gtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
                ||||||||||| ||| ||||||| |||||||| ||||
Sbjct: 17703649 gtgaagggccttctcttgctcctttgtgaagcactcc 17703685



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 331      cttgcagcactgccttttaagctcctcg 358
                ||||| |||||||||||| |||||||||
Sbjct: 17725744 cttgcggcactgcctttttagctcctcg 17725771



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 331      cttgcagcactgccttttaagctcctcg 358
                ||||| |||||||||||| |||||||||
Sbjct: 17702389 cttgcggcactgcctttttagctcctcg 17702416
to top
>emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0073H17
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 113494

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 613   gtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
             ||||||||||| ||| ||||||| |||||||| ||||
Sbjct: 32075 gtgaagggccttctcttgctcctttgtgaagcactcc 32039



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 613  gtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
            ||||||||||| ||| ||||||| |||||||| ||||
Sbjct: 4023 gtgaagggccttctcttgctcctttgtgaagcactcc 3987



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 331   cttgcagcactgccttttaagctcctcg 358
             ||||| |||||||||||| |||||||||
Sbjct: 33335 cttgcggcactgcctttttagctcctcg 33308



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 331  cttgcagcactgccttttaagctcctcg 358
            ||||| |||||||||||| |||||||||
Sbjct: 4449 cttgcggcactgcctttttagctcctcg 4422
to top
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 142246

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 613   gtgaagggcctcctcgtgctcctctgtgaagcgctcc 649
             ||||||||||| ||| ||||||| |||||||| ||||
Sbjct: 19049 gtgaagggccttctcttgctcctttgtgaagcactcc 19085



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 331   cttgcagcactgccttttaagctcctcg 358
             ||||| |||||||||||| |||||||||
Sbjct: 18623 cttgcggcactgcctttttagctcctcg 18650
to top
>ref|NM_186251.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4479

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 606  tgaggaggtgaagggcctcctcgtgctcctctgtgaagcg 645
            ||||||| |||||||||||||| || || | |||||||||
Sbjct: 4240 tgaggagctgaagggcctcctcttgttcatttgtgaagcg 4201
to top
>gb|AC162902.4| Mus musculus BAC clone RP23-448D23 from chromosome 12, complete sequence
          Length = 190357

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 216    tcttggatagagagagaactggat 239
              ||||||||||||||||| ||||||
Sbjct: 187826 tcttggatagagagagatctggat 187849
to top
>gb|AC164641.5| Mus musculus BAC clone RP23-393F10 from chromosome 12, complete
             sequence
          Length = 198725

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 216   tcttggatagagagagaactggat 239
             ||||||||||||||||| ||||||
Sbjct: 93261 tcttggatagagagagatctggat 93238
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 550     tgcagggaggcgctgcagct 569
               ||||||||||||||||||||
Sbjct: 6087776 tgcagggaggcgctgcagct 6087757
to top
>ref|XM_538441.2| PREDICTED: Canis familiaris similar to TGF beta receptor associated
            protein -1 (LOC481320), mRNA
          Length = 2814

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  agggcctcctcgtgctcctc 636
            ||||||||||||||||||||
Sbjct: 2279 agggcctcctcgtgctcctc 2260
to top
>emb|BX901925.10| Zebrafish DNA sequence from clone DKEYP-86C11 in linkage group 17,
             complete sequence
          Length = 187245

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   gagaactggatcaacaaggctagg 252
             ||||||||||| ||||||||||||
Sbjct: 15832 gagaactggataaacaaggctagg 15855
to top
>emb|Z97632.3|HS196E23 Human DNA sequence from clone RP1-196E23 on chromosome Xq26.1-27.2
            Contains the VGLL1 gene for vestgial like 1 (Drosophila),
            the HTATSF1 gene for HIV TAT specific factor 1, the BRS3
            gene for bombesin-like receptor 3 and a CpG island,
            complete sequence
          Length = 123004

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   cacccaaggccatggcatcc 109
            ||||||||||||||||||||
Sbjct: 9651 cacccaaggccatggcatcc 9632
to top
>emb|BX571819.6| Zebrafish DNA sequence from clone CH211-105H3 in linkage group 24,
             complete sequence
          Length = 118635

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   gagaactggatcaacaaggctagg 252
             ||||||||||| ||||||||||||
Sbjct: 81186 gagaactggataaacaaggctagg 81209
to top
>emb|BX248323.8| Zebrafish DNA sequence from clone CH211-199J6, complete sequence
          Length = 177714

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 229    gagaactggatcaacaaggctagg 252
              ||||||||||| ||||||||||||
Sbjct: 123644 gagaactggataaacaaggctagg 123621
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 606     tgaggaggtgaagggcctcctcgtgctcctctgtgaagcg 645
               ||||||| |||||||||||||| || || | |||||||||
Sbjct: 2195035 tgaggagctgaagggcctcctcttgttcatttgtgaagcg 2195074
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 550     tgcagggaggcgctgcagct 569
               ||||||||||||||||||||
Sbjct: 6086989 tgcagggaggcgctgcagct 6086970
to top
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090D11, complete sequence
          Length = 174865

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   tgcagggaggcgctgcagct 569
             ||||||||||||||||||||
Sbjct: 81252 tgcagggaggcgctgcagct 81233
to top
>gb|AC078815.22| Homo sapiens 12q BAC RP11-766N7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 163475

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   atgcaaaaaacttcaaggat 142
             ||||||||||||||||||||
Sbjct: 95311 atgcaaaaaacttcaaggat 95292
to top
>gb|AC074286.5| Homo sapiens BAC clone RP11-83I14 from 2, complete sequence
          Length = 125066

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   atggctggaaacttccaaat 513
             ||||||||||||||||||||
Sbjct: 75459 atggctggaaacttccaaat 75478
to top
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 606   tgaggaggtgaagggcctcctcgtgctcctctgtgaagcg 645
             ||||||| |||||||||||||| || || | |||||||||
Sbjct: 62937 tgaggagctgaagggcctcctcttgttcatttgtgaagcg 62976
to top
>dbj|AK106498.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E05, full
           insert sequence
          Length = 1341

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 tgcagggaggcgctgcagct 569
           ||||||||||||||||||||
Sbjct: 702 tgcagggaggcgctgcagct 721
to top
>emb|BX004975.9| Zebrafish DNA sequence from clone DKEY-14B16, complete sequence
          Length = 208909

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   gagaactggatcaacaaggctagg 252
             ||||||||||| ||||||||||||
Sbjct: 35658 gagaactggataaacaaggctagg 35635
to top
>gb|AC000115.1|HSAC000115 Human BAC clone GS188P18, complete sequence
          Length = 95855

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    cacccaaggccatggcatcc 109
             ||||||||||||||||||||
Sbjct: 43483 cacccaaggccatggcatcc 43502
to top
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 119     gtgtatgcaaaaaacttcaa 138
               ||||||||||||||||||||
Sbjct: 2475248 gtgtatgcaaaaaacttcaa 2475229


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,765,835
Number of Sequences: 3902068
Number of extensions: 5765835
Number of successful extensions: 107264
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106721
Number of HSP's gapped (non-prelim): 534
length of query: 649
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 626
effective length of database: 17,143,297,704
effective search space: 10731704362704
effective search space used: 10731704362704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top