>LRC32_PONPY (Q5RF01) Leucine-rich repeat-containing protein 32 precursor|
          Length = 662

 Score = 32.3 bits (72), Expect = 0.83
 Identities = 24/66 (36%), Positives = 30/66 (45%)
 Frame = +1

Query: 37  WLSLFCKYINWLHF*DFAGLPNIIYSVRSEQSLLLPTGRLHCKTQKASGVLQSSSGETTA 216
           WL L  +    LHF D A LP +IY   S   + LPTG      Q + G+   S G +  
Sbjct: 247 WLDL--RENKLLHFPDLAALPRLIYLNLSNNLIRLPTG----PPQDSKGIHAPSEGWSAL 300

Query: 217 GRSTRS 234
             ST S
Sbjct: 301 PLSTPS 306

>LRC32_HUMAN (Q14392) Leucine-rich repeat-containing protein 32 precursor (GARP|
           protein) (Garpin) (Glycoprotein A repetitions
           predominant)
          Length = 662

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 21/56 (37%), Positives = 26/56 (46%)
 Frame = +1

Query: 37  WLSLFCKYINWLHF*DFAGLPNIIYSVRSEQSLLLPTGRLHCKTQKASGVLQSSSG 204
           WL L  +    LHF D A LP +IY   S   + LPTG      Q + G+   S G
Sbjct: 247 WLDL--RENKLLHFPDLAALPRLIYLNLSNNLIRLPTG----PPQDSKGIHAPSEG 296

>PARA_ECOLI (P07620) Plasmid partition protein A|
          Length = 398

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 2   KLLQELKXI*SCGCRCSASTSIGFISKIS 88
           +L + +K I   GC C  +T+IGF+SK+S
Sbjct: 290 RLPELVKLISDEGCECQLATNIGFMSKLS 318

>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6|
          Length = 387

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 115 VRSEQSLLLPTGRLHCKTQKASGVLQSS 198
           +  E S  +  G+LHCK  K +GVL+++
Sbjct: 328 IDQELSRFIAAGKLHCKIDKVAGVLETN 355

>SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arginine-rich 54|
           kDa nuclear protein) (p54)
          Length = 484

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 442 TR*GTSSVR*PRAPKNPLHR*QDLPAQQRPKQKEKQKTRGPAPRD 308
           +R GT S + PR+PK  L R       ++ K+K+K K R    R+
Sbjct: 348 SRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERE 392


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,979,270
Number of Sequences: 219361
Number of extensions: 1100236
Number of successful extensions: 3492
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3490
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)