>MCR_SAISC (Q9N0W8) Mineralocorticoid receptor (MR)|
          Length = 982

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
 Frame = +3

Query: 174 TPATEPLEA------SPQNNTQAGSPSSSIETHDPRSSVIDPFAVKNQQANITESCNPAN 335
           +P + PL +      SP ++    SP SS     PRSSV  P  + N + +++   N  N
Sbjct: 258 SPLSSPLSSMKSSISSPPSHCSVKSPVSSPNNVTPRSSVSSPANINNSRCSVSSPSNTNN 317

Query: 336 VHSL 347
             +L
Sbjct: 318 RSTL 321

>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +3

Query: 165 ASITPATEPLEASPQNNTQAGSPSSSIETHDPRSSVIDPFAVKNQQANITESCNPANVHS 344
           AS +P++    +SP ++  + SPSSS  +  P SS     +  +  ++ +   + A+  S
Sbjct: 456 ASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSS 515

Query: 345 LP 350
            P
Sbjct: 516 AP 517

>AL2S3_RAT (Q8R2H7) Amyotrophic lateral sclerosis 2 chromosomal region|
           candidate gene 3 protein homolog (Trafficking protein,
           kinesin-binding 2) (GABA-A receptor-interacting factor
           1) (GRIF-1) (O-GlcNAc transferase-interacting protein of
           98 kDa)
          Length = 913

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 8/131 (6%)
 Frame = +3

Query: 51  FRQTATQKKL*QKIKTANXXXXXXXXXXXXXXXPLDCKASITPATEPLEASPQNNTQAGS 230
           F+Q A QK++   +K AN               P   ++S+    +P E+  Q       
Sbjct: 394 FKQKAQQKRVFDTVKVANDTRGRSVTFPVLLPIPGSNRSSVIMTAKPFESGVQQTEDKTL 453

Query: 231 PSSSIETHDP-RSSVIDPFAVKNQQANITESCNPANVHSLPLAK-NRLKPRLCFSGNW-- 398
           P+    T  P  S   DP  +       T       +H L L + N L  +  F+  W  
Sbjct: 454 PNQGSSTEVPGNSHPRDPPGLPEDSDLATA------LHRLSLRRQNYLSEKQFFAEEWER 507

Query: 399 ----LANEEED 419
               LA +EE+
Sbjct: 508 KLQILAEQEEE 518

>MYCN_XENLA (P24793) N-myc protein|
          Length = 437

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
 Frame = +3

Query: 162 KASITPATEPLEASPQNNTQAGSPSS-SIETHDPRSSVIDPFAVKNQQANITESCNPA-- 332
           KAS TP  EP    P ++T   S S   ++ ++P +  +DP  V     N  ESC  A  
Sbjct: 137 KASCTP--EPTIPHPPSSTVGSSVSGRGVDMNNPAAHCVDPAVVFPFPFNKGESCRTAPS 194

Query: 333 ----------NVHSLPLAKNRLKPRLCFSGNWLANE---EEDEDRD 431
                      V +   A+N  +P  C S +    E   E D+D D
Sbjct: 195 SANPPPCTTTTVPTSTTARNCTQP--CTSSSSSGEESHSESDDDED 238

>PO2F3_HUMAN (Q9UKI9) POU domain, class 2, transcription factor 3|
           (Octamer-binding transcription factor 11) (Oct-11)
           (Transcription factor Skn-1) (PLA-1 protein)
          Length = 436

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +3

Query: 168 SITPATEPLEASPQNNTQAGSPSSSIETHDPRSSVIDPFAVKNQQANITES 320
           S  P T     SP NN++  SP S +    P +S  +  A  N  ++   S
Sbjct: 373 STMPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSS 423

>YBV8_YEAST (P38266) Protein YBR108W|
          Length = 947

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
 Frame = +3

Query: 156 DCKASITPATEP----LEASPQNNTQAGSPSSSIETHDPRSSVIDPFAVKNQQANITE-- 317
           D  A+I P  +P    L++ P  +T   +P  ++    PR++V  P          TE  
Sbjct: 512 DVDANIMPPPKPFRHGLDSVPSEHTTKNAPERAVPILPPRNNVEPPPPPSRGNFERTESV 571

Query: 318 -SCNPANVHSLPLAKNRLKP 374
            S N ANV   P++ N L P
Sbjct: 572 LSTNAANVQEDPIS-NFLPP 590

>MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related protein 1)|
           (XMYB1)
          Length = 743

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
 Frame = +3

Query: 186 EPLEASPQNNTQAGSPSSSIETHDPRSSVIDPFAVKNQQANITESCNPAN--------VH 341
           E +  SPQ  T  G+P S ++ H  R   + P  V     +IT S   AN        V 
Sbjct: 349 ELIPISPQPQTAFGTPPSVLKQHKKRKITLSP--VTENGGSITTSVTEANSMTPKSTPVK 406

Query: 342 SLPLAKNR 365
           SLP + ++
Sbjct: 407 SLPFSPSQ 414


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,822,148
Number of Sequences: 219361
Number of extensions: 1266327
Number of successful extensions: 3295
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3294
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)