| Clone Name | rbasd11c03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016379.1| Zea mays clone Contig212 mRNA sequence Length = 1020 Score = 206 bits (104), Expect = 7e-50 Identities = 167/188 (88%) Strand = Plus / Minus Query: 201 cctagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtcca 260 ||||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| Sbjct: 632 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 573 Query: 261 tggccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgc 320 |||| |||| ||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 572 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagcgcgc 513 Query: 321 agtagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgc 380 |||| | |||||| ||||||||||||||||| |||||||| |||||||| ||||||| || Sbjct: 512 agtacaagttcccacaccggcagttgaatcccgtgagcccaaccctcttcctgcaggcgc 453 Query: 381 tgcaccgg 388 |||||||| Sbjct: 452 tgcaccgg 445 Score = 127 bits (64), Expect = 5e-26 Identities = 96/107 (89%) Strand = Plus / Minus Query: 533 ccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgcc 592 ||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||| | | Sbjct: 285 ccgttcacgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatc 226 Query: 593 atctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 |||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 225 atctccttgtggcacttagagcacatgttcatggtcgccgcgctgcc 179 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 |||||| |||||||||||||||||||||| Sbjct: 868 taaatagagcttacacaacatagccaaca 840
>gb|AY109331.1| Zea mays CL253_2 mRNA sequence Length = 2256 Score = 202 bits (102), Expect = 1e-48 Identities = 165/186 (88%) Strand = Plus / Minus Query: 203 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 262 ||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| || Sbjct: 1610 tagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccctg 1551 Query: 263 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 322 || |||| ||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1550 gcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagcgcgcag 1491 Query: 323 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgctg 382 || | |||||| ||||||||||||||||| |||||||| |||||||| ||||||| |||| Sbjct: 1490 tacaagttcccacaccggcagttgaatcccgtgagcccaaccctcttcctgcaggcgctg 1431 Query: 383 caccgg 388 |||||| Sbjct: 1430 caccgg 1425 Score = 135 bits (68), Expect = 2e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 533 ccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgcc 592 ||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||| | | Sbjct: 1265 ccgttcacgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatc 1206 Query: 593 atctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1205 atctccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 1159
>gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complete cds Length = 1000 Score = 182 bits (92), Expect = 9e-43 Identities = 164/188 (87%) Strand = Plus / Minus Query: 201 cctagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtcca 260 ||||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| Sbjct: 616 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 557 Query: 261 tggccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgc 320 |||| |||| ||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 556 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagtgcgc 497 Query: 321 agtagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgc 380 |||| | |||||| ||||||||||||||||| || || || |||||||| ||||||| || Sbjct: 496 agtacaagttcccacaccggcagttgaatcccgtaagtccaaccctcttcctgcaggcgc 437 Query: 381 tgcaccgg 388 |||||||| Sbjct: 436 tgcaccgg 429 Score = 135 bits (68), Expect = 2e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 533 ccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgcc 592 ||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||| | | Sbjct: 269 ccgttcacgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatc 210 Query: 593 atctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 atctccttgtggcacttggagcacatgttcatggtcgccgcgctgcc 163 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 |||||| |||||||||||||||||||||| Sbjct: 850 taaatagagcttacacaacatagccaaca 822
>gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence Length = 941 Score = 182 bits (92), Expect = 9e-43 Identities = 164/188 (87%) Strand = Plus / Minus Query: 201 cctagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtcca 260 ||||||||||| ||||||| || |||||||||||||| || |||||||| ||||||||| Sbjct: 638 cctagatcttggcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 579 Query: 261 tggccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgc 320 |||| |||| ||||||||||||||||| ||||||||||| ||||| ||||| ||| | Sbjct: 578 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtaccggtggagcgccc 519 Query: 321 agtagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgc 380 |||| | |||||| ||||||||||||||||| |||||||| |||||||| ||||||| || Sbjct: 518 agtacaagttcccacaccggcagttgaatcccgtgagcccaaccctcttcctgcaggcgc 459 Query: 381 tgcaccgg 388 |||||||| Sbjct: 458 tgcaccgg 451 Score = 127 bits (64), Expect = 5e-26 Identities = 96/107 (89%) Strand = Plus / Minus Query: 533 ccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgcc 592 ||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||| | | Sbjct: 291 ccgttcacgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatc 232 Query: 593 atctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 |||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 231 atctccttgtggcacttagagcacatgttcatggtcgccgcgctgcc 185 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 agcttacacaacatagccaaca 29 |||||||||||||||||||||| Sbjct: 867 agcttacacaacatagccaaca 846
>ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15 mRNA Length = 1000 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Minus Query: 203 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 262 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 681 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 622 Query: 263 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 322 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 621 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 562 Query: 323 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 378 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 561 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 506 Score = 117 bits (59), Expect = 5e-23 Identities = 79/86 (91%) Strand = Plus / Minus Query: 554 gaggaggcggccagcttggcctgctcctgcttcatcgccatctncttgtggcacttggag 613 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 318 gaggaggcagcaagcttggcctgctcctccttcatgatcatctccttgtggcacttggag 259 Query: 614 cacatgttcatggtcgccgcgctgcc 639 |||||||||||||||||||||||||| Sbjct: 258 cacatgttcatggtcgccgcgctgcc 233
>ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 991 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Minus Query: 203 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 262 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 664 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 605 Query: 263 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 322 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 604 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 545 Query: 323 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 378 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 544 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 489 Score = 117 bits (59), Expect = 5e-23 Identities = 79/86 (91%) Strand = Plus / Minus Query: 554 gaggaggcggccagcttggcctgctcctgcttcatcgccatctncttgtggcacttggag 613 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 301 gaggaggcagcaagcttggcctgctcctccttcatgatcatctccttgtggcacttggag 242 Query: 614 cacatgttcatggtcgccgcgctgcc 639 |||||||||||||||||||||||||| Sbjct: 241 cacatgttcatggtcgccgcgctgcc 216
>gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, complete cds Length = 1162 Score = 174 bits (88), Expect = 2e-40 Identities = 163/188 (86%) Strand = Plus / Minus Query: 201 cctagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtcca 260 ||||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| Sbjct: 808 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 749 Query: 261 tggccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgc 320 |||| |||| ||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 748 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcggtggagtgcgc 689 Query: 321 agtagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggtgc 380 |||| | |||||| ||||||||||||||||| || || || ||||| || ||||||| || Sbjct: 688 agtacaagttcccacaccggcagttgaatcccgtaagtccaacccttttcctgcaggcgc 629 Query: 381 tgcaccgg 388 |||||||| Sbjct: 628 tgcaccgg 621 Score = 131 bits (66), Expect = 3e-27 Identities = 92/101 (91%) Strand = Plus / Minus Query: 539 acgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatcgccatctnc 598 ||||||||||| | ||||||||| |||||||||||||| ||||||||| | ||||| | Sbjct: 455 acgatgctgtcgatagaggaggcagccagcttggcctgatcctgcttcgttatcatctcc 396 Query: 599 ttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 ttgtggcacttggagcacatgttcatggtcgccgcgctgcc 355 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 |||||| |||||||||||||||||||||| Sbjct: 1045 taaatagagcttacacaacatagccaaca 1017
>dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full insert sequence Length = 991 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Minus Query: 203 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 262 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 664 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 605 Query: 263 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 322 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 604 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 545 Query: 323 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 378 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 544 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 489 Score = 117 bits (59), Expect = 5e-23 Identities = 79/86 (91%) Strand = Plus / Minus Query: 554 gaggaggcggccagcttggcctgctcctgcttcatcgccatctncttgtggcacttggag 613 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 301 gaggaggcagcaagcttggcctgctcctccttcatgatcatctccttgtggcacttggag 242 Query: 614 cacatgttcatggtcgccgcgctgcc 639 |||||||||||||||||||||||||| Sbjct: 241 cacatgttcatggtcgccgcgctgcc 216
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Plus Query: 203 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 262 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 5346037 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 5346096 Query: 263 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 322 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 5346097 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 5346156 Query: 323 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 378 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 5346157 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 5346212 Score = 117 bits (59), Expect = 5e-23 Identities = 79/86 (91%) Strand = Plus / Plus Query: 554 gaggaggcggccagcttggcctgctcctgcttcatcgccatctncttgtggcacttggag 613 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 5346400 gaggaggcagcaagcttggcctgctcctccttcatgatcatctccttgtggcacttggag 5346459 Query: 614 cacatgttcatggtcgccgcgctgcc 639 |||||||||||||||||||||||||| Sbjct: 5346460 cacatgttcatggtcgccgcgctgcc 5346485
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Plus Query: 203 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 262 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 72340 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 72399 Query: 263 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 322 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 72400 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 72459 Query: 323 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 378 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 72460 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 72515 Score = 117 bits (59), Expect = 5e-23 Identities = 79/86 (91%) Strand = Plus / Plus Query: 554 gaggaggcggccagcttggcctgctcctgcttcatcgccatctncttgtggcacttggag 613 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 72703 gaggaggcagcaagcttggcctgctcctccttcatgatcatctccttgtggcacttggag 72762 Query: 614 cacatgttcatggtcgccgcgctgcc 639 |||||||||||||||||||||||||| Sbjct: 72763 cacatgttcatggtcgccgcgctgcc 72788
>dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E09, full insert sequence Length = 1000 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Minus Query: 203 tagatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatg 262 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| | Sbjct: 681 tagatcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatcccta 622 Query: 263 gccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcag 322 ||||||| ||||||||||||| ||| || |||||||| |||||||||||| ||| ||| Sbjct: 621 gccgcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacag 562 Query: 323 tagaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcaggt 378 || | ||| |||||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 561 tacatgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggt 506 Score = 117 bits (59), Expect = 5e-23 Identities = 79/86 (91%) Strand = Plus / Minus Query: 554 gaggaggcggccagcttggcctgctcctgcttcatcgccatctncttgtggcacttggag 613 |||||||| || |||||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 318 gaggaggcagcaagcttggcctgctcctccttcatgatcatctccttgtggcacttggag 259 Query: 614 cacatgttcatggtcgccgcgctgcc 639 |||||||||||||||||||||||||| Sbjct: 258 cacatgttcatggtcgccgcgctgcc 233
>gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-associated protein-3 (SAP-3) mRNA, complete cds Length = 1132 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 242 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 183 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 182 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 133 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 569 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 510 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 509 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 450 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 449 ttgccacatcggcagttgaatccggtaagaccaaccctctt 409 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 790 taaataaagcttacacaacatagccaaca 762
>gb|DQ083230.1| Oryza sativa (indica cultivar-group) clone 3B12G81 mRNA sequence Length = 449 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 237 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 178 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 177 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 128 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 338 cggcagttgaatccggtgagcccgaccctctt 369 ||||||||||||||||| || || |||||||| Sbjct: 435 cggcagttgaatccggtaagaccaaccctctt 404
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 24109587 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 24109528 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 24109527 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 24109478 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 24109914 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 24109855 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 24109854 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 24109795 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 24109794 ttgccacatcggcagttgaatccggtaagaccaaccctctt 24109754 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 24110135 taaataaagcttacacaacatagccaaca 24110107
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 43045 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 42986 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 42985 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 42936 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 43372 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 43313 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 43312 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 43253 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 43252 ttgccacatcggcagttgaatccggtaagaccaaccctctt 43212 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 43593 taaataaagcttacacaacatagccaaca 43565
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 119280 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 119221 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 119220 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 119171 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 119607 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 119548 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 119547 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 119488 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 119487 ttgccacatcggcagttgaatccggtaagaccaaccctctt 119447 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 119828 taaataaagcttacacaacatagccaaca 119800
>dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D03, full insert sequence Length = 999 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 331 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 272 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 271 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 222 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 658 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 599 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 598 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 539 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 538 ttgccacatcggcagttgaatccggtaagaccaaccctctt 498 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 879 taaataaagcttacacaacatagccaaca 851
>dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A12, full insert sequence Length = 1009 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 331 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 272 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 271 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 222 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 658 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 599 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 598 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 539 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 538 ttgccacatcggcagttgaatccggtaagaccaaccctctt 498 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 879 taaataaagcttacacaacatagccaaca 851
>dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C11, full insert sequence Length = 1000 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 332 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 273 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 272 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 223 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 659 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 600 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 599 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 540 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 539 ttgccacatcggcagttgaatccggtaagaccaaccctctt 499 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 880 taaataaagcttacacaacatagccaaca 852
>dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026K20, full insert sequence Length = 1209 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 329 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 270 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 269 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 220 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 656 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 597 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 596 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 537 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 536 ttgccacatcggcagttgaatccggtaagaccaaccctctt 496 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 877 taaataaagcttacacaacatagccaaca 849
>dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C08, full insert sequence Length = 1021 Score = 125 bits (63), Expect = 2e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 530 ccaccgttgacgatgctgtcaaaagaggaggcggccagcttggcctgctcctgcttcatc 589 ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 328 ccaccattgacaatgctgtcgatagaggaggctgccagcttggcctgctcctgcttcatt 269 Query: 590 gccatctncttgtggcacttggagcacatgttcatggtcgccgcgctgcc 639 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 268 atcatctccttgtggcactttgagcacatgttcatggtagccgcactgcc 219 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 655 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 596 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 595 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 536 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 535 ttgccacatcggcagttgaatccggtaagaccaaccctctt 495 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 876 taaataaagcttacacaacatagccaaca 848
>gb|AY105867.1| Zea mays PCO143262 mRNA sequence Length = 984 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Minus Query: 204 agatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatgg 263 |||||||||| |||||||||||||||||||| || |||||||||||||| |||||| | | Sbjct: 602 agatcttgtcaagcttctccgccttcaccactggattggccttggcgatagcgtccctag 543 Query: 264 ccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagt 323 | |||| || |||||||||| ||| ||||| ||||| |||||||||||| ||| |||| Sbjct: 542 ctgcagttcgatagtcgaactggcagtcgtgtttgtcggagtagcggtgcatcgaacagt 483 Query: 324 agaggttcccgcaccggcagtt 345 | ||||||||| |||||||| Sbjct: 482 acgtgttcccgcatcggcagtt 461 Score = 95.6 bits (48), Expect = 2e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 554 gaggaggcggccagcttggcctgctcctgcttcatcgccatctncttgtggcacttggag 613 |||||||| |||| || |||||||||||||||||| ||||| |||||||||||||||| Sbjct: 246 gaggaggcagccaactgggcctgctcctgcttcattatcatctccttgtggcacttggag 187 Query: 614 cacatgttcatggtcgccgcgct 636 |||||||||||||| || ||||| Sbjct: 186 cacatgttcatggtggcagcgct 164
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 93.7 bits (47), Expect = 7e-16 Identities = 61/66 (92%) Strand = Plus / Plus Query: 574 ctgctcctgcttcatcgccatctncttgtggcacttggagcacatgttcatggtcgccgc 633 |||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgctcctccttcatgatcatctccttgtggcacttggagcacatgttcatggtcgccgc 60 Query: 634 gctgcc 639 |||||| Sbjct: 61 gctgcc 66
>gb|AY105966.1| Zea mays PCO143261 mRNA sequence Length = 1035 Score = 93.7 bits (47), Expect = 7e-16 Identities = 76/86 (88%) Strand = Plus / Minus Query: 554 gaggaggcggccagcttggcctgctcctgcttcatcgccatctncttgtggcacttggag 613 |||||||| ||||||| |||||||||||||||| | ||||| |||||||||||||||| Sbjct: 247 gaggaggcagccagctgggcctgctcctgcttcgttatcatctccttgtggcacttggag 188 Query: 614 cacatgttcatggtcgccgcgctgcc 639 ||||||||||| ||||| || ||||| Sbjct: 187 cacatgttcatcgtcgcagcactgcc 162 Score = 91.7 bits (46), Expect = 3e-15 Identities = 142/174 (81%) Strand = Plus / Minus Query: 204 agatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatgg 263 ||||||||||||||||||||||| ||||||| || ||||||||||| || |||||| | | Sbjct: 603 agatcttgtcgagcttctccgccctcaccacaggattggccttggcaatcgcgtcccttg 544 Query: 264 ccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagt 323 | |||| || |||||||||| || || || ||||| |||||||||||| || |||| Sbjct: 543 ctgcagtccgatagtcgaactgacagtcatgtttgtcggagtagcggtgcaccgaacagt 484 Query: 324 agaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcagg 377 | | ||||||||| |||||| | ||||| || ||||| || | ||| ||||||| Sbjct: 483 acatgttcccgcatcggcagctaaatcccgtcagcccaacacgcttcctgcagg 430
>gb|BT019326.1| Zea mays clone Contig1045.F mRNA sequence Length = 779 Score = 91.7 bits (46), Expect = 3e-15 Identities = 142/174 (81%) Strand = Plus / Minus Query: 204 agatcttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatgg 263 ||||||||||||||||||||||| ||||||| || ||||||||||| || |||||| | | Sbjct: 291 agatcttgtcgagcttctccgccctcaccacaggattggccttggcaatcgcgtcccttg 232 Query: 264 ccgcagcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagt 323 | |||| || |||||||||| || || || ||||| |||||||||||| || |||| Sbjct: 231 ctgcagtccgatagtcgaactgacagtcatgtttgtcggagtagcggtgcaccgaacagt 172 Query: 324 agaggttcccgcaccggcagttgaatccggtgagcccgaccctctttctgcagg 377 | | ||||||||| |||||| | ||||| || ||||| || | ||| ||||||| Sbjct: 171 acatgttcccgcatcggcagctaaatcccgtcagcccaacacgcttcctgcagg 118
>dbj|AK062342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-F03, full insert sequence Length = 631 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 297 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 238 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagtagagg 328 | || ||||| |||| ||| || ||||| || || ||||||||| | |||||||| | | Sbjct: 237 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgcagtacaag 178 Query: 329 ttcccgcaccggcagttgaatccggtgagcccgaccctctt 369 || || || ||||||||||||||||| || || |||||||| Sbjct: 177 ttgccacatcggcagttgaatccggtaagaccaaccctctt 137 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 518 taaataaagcttacacaacatagccaaca 490
>gb|DQ083231.1| Oryza sativa (indica cultivar-group) clone 5B6A82 mRNA sequence Length = 391 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 336 taaataaagcttacacaacatagccaaca 308 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 115 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 56 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgcagt 323 | || ||||| |||| ||| || ||||| || || ||||||||||| ||||||| Sbjct: 55 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcgttgcgcagt 1
>gb|DQ083227.1| Oryza sativa (indica cultivar-group) clone 2B5A77 mRNA sequence Length = 391 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 1 taaataaagcttacacaacatagccaaca 29 ||||||||||||||||||||||||||||| Sbjct: 336 taaataaagcttacacaacatagccaaca 308 Score = 50.1 bits (25), Expect = 0.009 Identities = 91/113 (80%) Strand = Plus / Minus Query: 209 ttgtcgagcttctccgccttcaccaccgggttggccttggcgatggcgtccatggccgca 268 ||||| || |||||||||||||||||||| || |||||||| || || ||| | || || Sbjct: 115 ttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccctagcagcg 56 Query: 269 gcgcggtagtcgaacttgcactcgtgcttgtccgagtagcggtgcgtcgcgca 321 | || ||||| |||| ||| || ||||| || || ||||||||||| ||||| Sbjct: 55 gtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcgttgcgca 3
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144, complete sequence Length = 135217 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 204 agatcttgtcgagcttctccgccttcaccaccgggttggccttggcgat 252 ||||||||| |||||||| |||||||||||||||| ||||| ||||| Sbjct: 38652 agatcttgttcagcttctcacccttcaccaccgggttcgccttcgcgat 38700
>dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45A23, TM0318, complete sequence Length = 117676 Score = 50.1 bits (25), Expect = 0.009 Identities = 57/68 (83%) Strand = Plus / Plus Query: 566 agcttggcctgctcctgcttcatcgccatctncttgtggcacttggagcacatgttcatg 625 |||||| ||||||||||||||| ||| | ||||| |||||||| |||||||||||| Sbjct: 54536 agcttgtcctgctcctgcttcaatagcatgtccttgtaacacttggaacacatgttcatg 54595 Query: 626 gtcgccgc 633 || ||||| Sbjct: 54596 gtagccgc 54603
>gb|AY137590.1| Oryza sativa (indica cultivar-group) multiple stress-associated zinc-finger protein (OSISAP1) gene, complete cds Length = 3139 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 caccaccgggttggccttggcgatggcgtcc 259 ||||||||||||| || |||||||||||||| Sbjct: 2930 caccaccgggttgtccctggcgatggcgtcc 2900
>gb|AF140722.2| Oryza sativa (indica cultivar-group) multiple stress-responsive zinc-finger protein mRNA, complete cds Length = 844 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 caccaccgggttggccttggcgatggcgtcc 259 ||||||||||||| || |||||||||||||| Sbjct: 577 caccaccgggttgtccctggcgatggcgtcc 547
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 caccaccgggttggccttggcgatggcgtcc 259 ||||||||||||| || |||||||||||||| Sbjct: 18592224 caccaccgggttgtccctggcgatggcgtcc 18592194 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 gcacttggagcacatgttcatggtc 628 ||||||||||||||||||| ||||| Sbjct: 16958194 gcacttggagcacatgttcttggtc 16958170 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 604 gcacttggagcacatgttcatggtcgccgcgctgcc 639 |||||||||||| | |||| |||||||| ||||||| Sbjct: 16958011 gcacttggagcagaggttcttggtcgcctcgctgcc 16957976
>dbj|AK119793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B06, full insert sequence Length = 708 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 caccaccgggttggccttggcgatggcgtcc 259 ||||||||||||| || |||||||||||||| Sbjct: 594 caccaccgggttgtccctggcgatggcgtcc 564
>dbj|AK106128.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F08, full insert sequence Length = 914 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 caccaccgggttggccttggcgatggcgtcc 259 ||||||||||||| || |||||||||||||| Sbjct: 590 caccaccgggttgtccctggcgatggcgtcc 560
>dbj|AK070140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G11, full insert sequence Length = 860 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 caccaccgggttggccttggcgatggcgtcc 259 ||||||||||||| || |||||||||||||| Sbjct: 595 caccaccgggttgtccctggcgatggcgtcc 565
>dbj|AK061067.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-B12, full insert sequence Length = 870 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 caccaccgggttggccttggcgatggcgtcc 259 ||||||||||||| || |||||||||||||| Sbjct: 594 caccaccgggttgtccctggcgatggcgtcc 564
>ref|NM_115140.2| Arabidopsis thaliana DNA binding / zinc ion binding AT3G52800 mRNA, complete cds Length = 1129 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 ccgcaccggcagttgaatccggtgagcccgaccc 365 ||||||||||| ||||||||||| | |||||||| Sbjct: 635 ccgcaccggcacttgaatccggttaacccgaccc 602
>ref|XM_416311.1| PREDICTED: Gallus gallus similar to DIP13 beta; adaptor protein containing PH domain, PTB domain and leucine zipper motif 2 (LOC418075), mRNA Length = 3201 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 491 gctgtgctgccagcagcaaggtgctc 516 ||||||||||||||||||||| |||| Sbjct: 2293 gctgtgctgccagcagcaaggggctc 2268
>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22 Length = 100028 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 ccgcaccggcagttgaatccggtgagcccgaccc 365 ||||||||||| ||||||||||| | |||||||| Sbjct: 90668 ccgcaccggcacttgaatccggttaacccgaccc 90635
>gb|AY072524.1| Arabidopsis thaliana zinc finger-like protein (At3g52800; F3C22_200) mRNA, complete cds Length = 541 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 ccgcaccggcagttgaatccggtgagcccgaccc 365 ||||||||||| ||||||||||| | |||||||| Sbjct: 380 ccgcaccggcacttgaatccggttaacccgaccc 347
>gb|AY042871.1| Arabidopsis thaliana zinc finger-like protein (F3C22_200) mRNA, complete cds Length = 871 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 ccgcaccggcagttgaatccggtgagcccgaccc 365 ||||||||||| ||||||||||| | |||||||| Sbjct: 472 ccgcaccggcacttgaatccggttaacccgaccc 439
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 219 tctccgccttcaccaccgggtt 240 |||||||||||||||||||||| Sbjct: 28232417 tctccgccttcaccaccgggtt 28232438
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 219 tctccgccttcaccaccgggtt 240 |||||||||||||||||||||| Sbjct: 87962 tctccgccttcaccaccgggtt 87983
>gb|AC093467.10| Mus musculus chromosome 12, clone RP23-9A4, complete sequence Length = 236969 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 486 ccaccgctgtgctgccagcagc 507 |||||||||||||||||||||| Sbjct: 198827 ccaccgctgtgctgccagcagc 198806
>gb|AC124471.4| Mus musculus BAC clone RP24-79D7 from 12, complete sequence Length = 179503 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 486 ccaccgctgtgctgccagcagc 507 |||||||||||||||||||||| Sbjct: 8443 ccaccgctgtgctgccagcagc 8422
>gb|AC145942.4| Gallus gallus BAC clone CH261-21I23 from chromosome unknown, complete sequence Length = 228603 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 491 gctgtgctgccagcagcaaggtgctc 516 ||||||||||||||||||||| |||| Sbjct: 79147 gctgtgctgccagcagcaaggggctc 79122
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 ggccttggcgatggcgtccatggcc 265 ||||||||||||||| ||||||||| Sbjct: 801463 ggccttggcgatggcctccatggcc 801439
>emb|BX908807.1| Neurospora crassa DNA linkage group III BAC contig B13B7 Length = 93134 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 ctctccatggccgcctcgctg 424 ||||||||||||||||||||| Sbjct: 87774 ctctccatggccgcctcgctg 87794
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 gttggccttggcgatggcgtc 258 ||||||||||||||||||||| Sbjct: 69356 gttggccttggcgatggcgtc 69376
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 gttggccttggcgatggcgtc 258 ||||||||||||||||||||| Sbjct: 334180 gttggccttggcgatggcgtc 334200
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gttggccttggcgatggcgtc 258 ||||||||||||||||||||| Sbjct: 15255 gttggccttggcgatggcgtc 15235
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 gcacttggagcacatgttcatggtc 628 ||||||||||||||||||| ||||| Sbjct: 88007 gcacttggagcacatgttcttggtc 87983 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 604 gcacttggagcacatgttcatggtcgccgcgctgcc 639 |||||||||||| | |||| |||||||| ||||||| Sbjct: 87824 gcacttggagcagaggttcttggtcgcctcgctgcc 87789
>emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in linkage group 11, complete sequence Length = 128109 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ataatgcagcaaagacgcacg 148 ||||||||||||||||||||| Sbjct: 58808 ataatgcagcaaagacgcacg 58828
>gb|AY106416.1| Zea mays PCO123428 mRNA sequence Length = 744 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 298 gtccgagtagcggtgcgtcgcgcagtagaggttcccgcaccggcagttgaatccggtgag 357 ||||||||||||||||| ||||| |||||| ||||| |||||| ||| || ||||| Sbjct: 113 gtccgagtagcggtgcgcgccgcagaagaggtctccgcagcggcagcggaagcccgtgag 54 Query: 358 cccgaccctctttctgcaggt 378 ||| |||| ||| | |||||| Sbjct: 53 ccccacccgcttgcggcaggt 33
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gcttctccgccttcaccaccg 236 ||||||||||||||||||||| Sbjct: 199156 gcttctccgccttcaccaccg 199136
>ref|XM_527724.1| PREDICTED: Pan troglodytes similar to T-cell receptor gamma chain V region V108A precursor (LOC472349), mRNA Length = 1371 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gatggcgtccatggccgcag 269 |||||||||||||||||||| Sbjct: 466 gatggcgtccatggccgcag 447
>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence Length = 158864 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 cctggggctgccgccgaggc 65 |||||||||||||||||||| Sbjct: 41181 cctggggctgccgccgaggc 41200
>gb|AC022342.3| Drosophila melanogaster clone BACR33N21, complete sequence Length = 179839 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 573 cctgctcctgcttcatcgccatct 596 |||||||||||| ||||||||||| Sbjct: 10812 cctgctcctgctccatcgccatct 10789
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete sequence Length = 206418 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 cctggggctgccgccgaggc 65 |||||||||||||||||||| Sbjct: 88254 cctggggctgccgccgaggc 88273
>ref|NG_001336.2| Homo sapiens T cell receptor gamma locus (TRG@) on chromosome 7 Length = 140728 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gatggcgtccatggccgcag 269 |||||||||||||||||||| Sbjct: 62422 gatggcgtccatggccgcag 62403
>gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section 94 of 121 of the complete plasmid sequence Length = 10943 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ggctgccgccgaggcgcgtg 70 |||||||||||||||||||| Sbjct: 9575 ggctgccgccgaggcgcgtg 9594
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgggttggccttggcgatgg 254 |||||||||||||||||||| Sbjct: 3710423 cgggttggccttggcgatgg 3710404
>gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complete sequence Length = 171816 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gatggcgtccatggccgcag 269 |||||||||||||||||||| Sbjct: 132425 gatggcgtccatggccgcag 132444
>emb|CR853300.3| Wallaby DNA sequence from clone MEKBa-585D22, complete sequence Length = 165531 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ctctttctgcaggtgctgca 384 |||||||||||||||||||| Sbjct: 163144 ctctttctgcaggtgctgca 163125
>gb|AC005535.2| Homo sapiens PAC clone RP5-1168M19 from 7, complete sequence Length = 157813 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 cctggggctgccgccgaggc 65 |||||||||||||||||||| Sbjct: 149823 cctggggctgccgccgaggc 149842
>ref|XM_502694.1| Yarrowia lipolytica CLIB122, YALI0D11330g predicted mRNA Length = 876 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ttggccttggcgatggcgtc 258 |||||||||||||||||||| Sbjct: 617 ttggccttggcgatggcgtc 598
>emb|AL158055.12| Human DNA sequence from clone RP11-348F1 on chromosome Xp11.1-11.22 Contains the NUDT11 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 11, two novel genes, the NUDT10 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 10 and three CpG islands, complete sequence Length = 184873 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 acctggggctgccgccgaggcgcg 68 ||||| |||||||||||||||||| Sbjct: 103047 acctgtggctgccgccgaggcgcg 103024
>gb|AE005753.1| Caulobacter crescentus CB15 section 79 of 359 of the complete genome Length = 10329 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 ggcggccagcttggcctgct 578 |||||||||||||||||||| Sbjct: 2776 ggcggccagcttggcctgct 2795
>dbj|AK165988.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730027B12 product:Similar to serine/threonine kinase 35 (Fragment) homolog [Mus musculus], full insert sequence Length = 5324 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gcttctccgccttcaccacc 235 |||||||||||||||||||| Sbjct: 4040 gcttctccgccttcaccacc 4021
>gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor locus, complete sequence Length = 140691 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gatggcgtccatggccgcag 269 |||||||||||||||||||| Sbjct: 62417 gatggcgtccatggccgcag 62398
>dbj|AK085193.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched library, clone:D530005H18 product:unclassifiable, full insert sequence Length = 3788 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gcttctccgccttcaccacc 235 |||||||||||||||||||| Sbjct: 2507 gcttctccgccttcaccacc 2488
>dbj|AK053817.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130309P10 product:unclassifiable, full insert sequence Length = 3812 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ctgccaccgctgtgctgcca 502 |||||||||||||||||||| Sbjct: 3081 ctgccaccgctgtgctgcca 3100
>gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 222712 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ctgccaccgctgtgctgcca 502 |||||||||||||||||||| Sbjct: 182225 ctgccaccgctgtgctgcca 182206
>gb|AF222338.1|AF222338 Rattus norvegicus voltage gated N-type calcium channel alpha1B gene, partial cds, alternatively spliced Length = 6340 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 gaagccagcatgatgaaaggataa 131 ||||||||||||| |||||||||| Sbjct: 2259 gaagccagcatgaggaaaggataa 2282
>emb|AL671536.8| Mouse DNA sequence from clone RP23-291O10 on chromosome X, complete sequence Length = 221255 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 gcttgggcctttggggctct 407 |||||||||||||||||||| Sbjct: 134103 gcttgggcctttggggctct 134084
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ccttggcgatggcgtccatg 262 |||||||||||||||||||| Sbjct: 4628196 ccttggcgatggcgtccatg 4628177
>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210862 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ctgccaccgctgtgctgcca 502 |||||||||||||||||||| Sbjct: 8419 ctgccaccgctgtgctgcca 8400
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ttggccttggcgatggcgtc 258 |||||||||||||||||||| Sbjct: 1186632 ttggccttggcgatggcgtc 1186651
>gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 of 74 of the complete sequence Length = 314743 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 573 cctgctcctgcttcatcgccatct 596 |||||||||||| ||||||||||| Sbjct: 157189 cctgctcctgctccatcgccatct 157166
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ggttggccttggcgatggcg 256 |||||||||||||||||||| Sbjct: 4682855 ggttggccttggcgatggcg 4682836
>ref|NM_001038635.1| Mus musculus serine/threonine kinase 35 (Stk35), transcript variant 2, mRNA Length = 5401 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gcttctccgccttcaccacc 235 |||||||||||||||||||| Sbjct: 4101 gcttctccgccttcaccacc 4082
>ref|NM_183262.2| Mus musculus serine/threonine kinase 35 (Stk35), transcript variant 1, mRNA Length = 6151 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gcttctccgccttcaccacc 235 |||||||||||||||||||| Sbjct: 4851 gcttctccgccttcaccacc 4832
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ttggccttggcgatggcgtc 258 |||||||||||||||||||| Sbjct: 1420942 ttggccttggcgatggcgtc 1420923
>emb|AL808137.4| Mouse DNA sequence from clone RP23-358G23 on chromosome 2, complete sequence Length = 199593 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gcttctccgccttcaccacc 235 |||||||||||||||||||| Sbjct: 185953 gcttctccgccttcaccacc 185934
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 gctgccagcagcaaggtgct 515 |||||||||||||||||||| Sbjct: 2924388 gctgccagcagcaaggtgct 2924369 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,374,182 Number of Sequences: 3902068 Number of extensions: 4374182 Number of successful extensions: 90083 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 89177 Number of HSP's gapped (non-prelim): 893 length of query: 639 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 616 effective length of database: 17,143,297,704 effective search space: 10560271385664 effective search space used: 10560271385664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)