ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11b16 |
|---|---|
| Clone Library Name | barley_pub |
>APR1_ARATH (P92979) 5'-adenylylsulfate reductase 1, chloroplast precursor (EC| 1.8.4.9) (Adenosine 5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 1) (APS sulfotransferase 1) (Thioredoxin independent APS reductase 1) (3'-phosphoadenosine-5'-phosphos Length = 465 Score = 114 bits (285), Expect(2) = 1e-36 Identities = 56/77 (72%), Positives = 68/77 (88%) Frame = -2 Query: 399 QAMEASYVELAEQLSGSGIKVAKFRADGEQKSFAQAELQLQSFPTILLFPGRTVKPIKYP 220 QAMEASY ELA++L+GSGIKVAKFRADG+QK FA+ ELQL SFPTIL+FP + +PIKYP Sbjct: 389 QAMEASYDELADKLAGSGIKVAKFRADGDQKEFAKQELQLGSFPTILVFPKNSSRPIKYP 448 Query: 219 SEKRDVQSLLAFVNTLR 169 SEKRDV+SL +F+N +R Sbjct: 449 SEKRDVESLTSFLNLVR 465 Score = 58.5 bits (140), Expect(2) = 1e-36 Identities = 22/28 (78%), Positives = 25/28 (89%) Frame = -3 Query: 587 GIENLXRLENRAEPWLAVLYAPWCPYCQ 504 GIENL +LENR EPW+ VLYAPWCP+CQ Sbjct: 362 GIENLMKLENRKEPWIVVLYAPWCPFCQ 389
>APR2_ARATH (P92981) 5'-adenylylsulfate reductase 2, chloroplast precursor (EC| 1.8.4.9) (Adenosine 5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 2) (APS sulfotransferase 2) (Thioredoxin independent APS reductase 2) (3'-phosphoadenosine-5'-phosphos Length = 454 Score = 117 bits (292), Expect(2) = 1e-36 Identities = 58/77 (75%), Positives = 66/77 (85%) Frame = -2 Query: 399 QAMEASYVELAEQLSGSGIKVAKFRADGEQKSFAQAELQLQSFPTILLFPGRTVKPIKYP 220 QAMEASY+ELAE+L+G G+KVAKFRADGEQK FA+ ELQL SFPTILLFP R + IKYP Sbjct: 378 QAMEASYIELAEKLAGKGVKVAKFRADGEQKEFAKQELQLGSFPTILLFPKRAPRAIKYP 437 Query: 219 SEKRDVQSLLAFVNTLR 169 SE RDV SL++FVN LR Sbjct: 438 SEHRDVDSLMSFVNLLR 454 Score = 55.8 bits (133), Expect(2) = 1e-36 Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = -3 Query: 587 GIENLXRLENRAEPWLAVLYAPWCPYCQ 504 G+ENL +LENR E WL VLYAPWCP+CQ Sbjct: 351 GVENLLKLENRKEAWLVVLYAPWCPFCQ 378
>APR3_ARATH (P92980) 5'-adenylylsulfate reductase 3, chloroplast precursor (EC| 1.8.4.9) (Adenosine 5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 3) (APS sulfotransferase 3) (Thioredoxin independent APS reductase 3) (3'-phosphoadenosine-5'-phosphos Length = 458 Score = 111 bits (277), Expect(2) = 9e-35 Identities = 54/77 (70%), Positives = 66/77 (85%) Frame = -2 Query: 399 QAMEASYVELAEQLSGSGIKVAKFRADGEQKSFAQAELQLQSFPTILLFPGRTVKPIKYP 220 QAMEAS+ ELA++L GSG+KVAKFRADG+QK FA+ ELQL SFPTIL+FP + +PIKYP Sbjct: 382 QAMEASFDELADKLGGSGVKVAKFRADGDQKDFAKKELQLGSFPTILVFPKNSSRPIKYP 441 Query: 219 SEKRDVQSLLAFVNTLR 169 SEKRDV SL +F+N +R Sbjct: 442 SEKRDVDSLTSFLNLVR 458 Score = 55.5 bits (132), Expect(2) = 9e-35 Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = -3 Query: 587 GIENLXRLENRAEPWLAVLYAPWCPYCQ 504 GIENL +LENR E W+ VLYAPWCP+CQ Sbjct: 355 GIENLMKLENRKEAWIVVLYAPWCPFCQ 382
>PDIA4_MOUSE (P08003) Protein disulfide-isomerase A4 precursor (EC 5.3.4.1)| (Protein ERp-72) (ERp72) Length = 638 Score = 32.3 bits (72), Expect(2) = 0.043 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = -2 Query: 408 GVVQAMEASYVELAEQLSGS-GIKVAKFRADGEQKSFAQAELQLQSFPTILLFP-GRTVK 235 G + +E Y L ++ G + +AK D + +++ FPTI P G Sbjct: 549 GHCKQLEPIYTSLGKKYKGQKDLVIAKM--DATANDITNDQYKVEGFPTIYFAPSGDKKN 606 Query: 234 PIKYPSEKRDVQSLLAFVN 178 PIK+ RD++ L F++ Sbjct: 607 PIKFEGGNRDLEHLSKFID 625 Score = 23.5 bits (49), Expect(2) = 0.043 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = -3 Query: 542 LAVLYAPWCPYCQ 504 L YAPWC +C+ Sbjct: 540 LIEFYAPWCGHCK 552
>PDIA4_RAT (P38659) Protein disulfide-isomerase A4 precursor (EC 5.3.4.1)| (Protein ERp-72) (ERp72) (Calcium-binding protein 2) (CaBP2) Length = 643 Score = 31.6 bits (70), Expect(2) = 0.071 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = -2 Query: 408 GVVQAMEASYVELAEQLSGS-GIKVAKFRADGEQKSFAQAELQLQSFPTILLFP-GRTVK 235 G + +E Y L ++ G + +AK D +++ FPTI P G Sbjct: 554 GHCKQLEPVYTSLGKKYKGQKDLVIAKM--DATANDITNDRYKVEGFPTIYFAPSGDKKN 611 Query: 234 PIKYPSEKRDVQSLLAFVN 178 PIK+ RD++ L F++ Sbjct: 612 PIKFEGGNRDLEHLSKFID 630 Score = 23.5 bits (49), Expect(2) = 0.071 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = -3 Query: 542 LAVLYAPWCPYCQ 504 L YAPWC +C+ Sbjct: 545 LIEFYAPWCGHCK 557
>ERP38_NEUCR (Q92249) Protein disulfide-isomerase erp38 precursor (EC 5.3.4.1)| (ERp38) Length = 369 Score = 35.8 bits (81), Expect = 0.094 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 6/123 (4%) Frame = -2 Query: 531 IRSLVPVLPGTSTLRSQVLLDSI-SNYIQELRTWLAETIVVY-----GVVQAMEASYVEL 370 ++SLV + +LD I SN+ + T+V + G + + Y EL Sbjct: 4 LKSLVVASLAAAVAAKSAVLDLIPSNFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEEL 63 Query: 369 AEQLSGSGIKVAKFRADGEQKSFAQAELQLQSFPTILLFPGRTVKPIKYPSEKRDVQSLL 190 A L + KV + D + + +Q FPT+ F G++ +P+ Y RD+ SL Sbjct: 64 ATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLKFFDGKSEQPVDYKG-GRDLDSLS 122 Query: 189 AFV 181 F+ Sbjct: 123 NFI 125 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = -2 Query: 345 IKVAKFRADGEQKSFAQAELQLQSFPTILLFPGRTVKPIKYPSEKRDVQSLLAFVN 178 I +AK AD + AE + FPTI FP + P Y + R L+ F+N Sbjct: 193 ITIAKVDADAPTGKKSAAEYGVSGFPTIKFFPKGSTTPEDY-NGGRSEADLVKFLN 247
>PDI1_CAEEL (Q17967) Protein disulfide-isomerase 1 precursor (EC 5.3.4.1) (PDI| 1) (Prolyl 4-hydroxylase beta 1 subunit) Length = 485 Score = 31.2 bits (69), Expect(2) = 0.12 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = -2 Query: 375 ELAEQL-SGSGIKVAKFRADGEQKSFAQAELQLQSFPTILLFPGRTVKPIKYPSEKRDVQ 199 ELAE+ S + +AK A + A++++ SFPT+ L+P + P+ Y + R+++ Sbjct: 405 ELAEKYESNPNVVIAKLDATLNEL----ADVKVNSFPTLKLWPAGSSTPVDYDGD-RNLE 459 Query: 198 SLLAFVN 178 FVN Sbjct: 460 KFEEFVN 466 Score = 23.1 bits (48), Expect(2) = 0.12 Identities = 6/9 (66%), Positives = 8/9 (88%) Frame = -3 Query: 530 YAPWCPYCQ 504 YAPWC +C+ Sbjct: 389 YAPWCGHCK 397
>PDIA2_HUMAN (Q13087) Protein disulfide-isomerase A2 precursor (EC 5.3.4.1)| (PDIp) Length = 525 Score = 25.8 bits (55), Expect(2) = 0.90 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 1/19 (5%) Frame = -3 Query: 557 RAEPWLAV-LYAPWCPYCQ 504 R P L V YAPWC +CQ Sbjct: 57 REHPALLVEFYAPWCGHCQ 75 Score = 25.4 bits (54), Expect(2) = 0.90 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = -2 Query: 408 GVVQAMEASYVELAEQLSGSGIKVAKFRADGEQKSFAQAELQLQSFPTILLF-PGRTVKP 232 G QA+ Y + A L+ + V + DG + E + +PT+ F G P Sbjct: 72 GHCQALAPEYSKAAAVLAAESMVVTLAKVDGPAQRELAEEFGVTEYPTLKFFRNGNRTHP 131 Query: 231 IKYPSEKRDVQSL 193 +Y + RD + + Sbjct: 132 EEY-TGPRDAEGI 143
>PDIA2_PONPY (Q5RCH2) Protein disulfide-isomerase A2 precursor (EC 5.3.4.1)| Length = 525 Score = 25.8 bits (55), Expect(2) = 2.4 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 1/19 (5%) Frame = -3 Query: 557 RAEPWLAV-LYAPWCPYCQ 504 R P L V YAPWC +CQ Sbjct: 57 REHPALLVEFYAPWCGHCQ 75 Score = 23.9 bits (50), Expect(2) = 2.4 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Frame = -2 Query: 408 GVVQAMEASYVELAEQLSGSGIKVAKFRADGEQKSFAQAELQLQSFPTILLF-PGRTVKP 232 G QA+ Y + A L+ V + DG + E + +PT+ F G P Sbjct: 72 GHCQALAPEYSKAAAVLAAESSVVMLAKVDGPAQPELAEEFGVTEYPTLKFFRDGNRTHP 131 Query: 231 IKY 223 +Y Sbjct: 132 EEY 134
>PDI_YEAST (P17967) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Thioredoxin-related glycoprotein 1) Length = 522 Score = 25.0 bits (53), Expect(2) = 2.4 Identities = 17/76 (22%), Positives = 33/76 (43%) Frame = -2 Query: 408 GVVQAMEASYVELAEQLSGSGIKVAKFRADGEQKSFAQAELQLQSFPTILLFPGRTVKPI 229 G + + +Y ELA+ + + V + D + + ++ +PTI+L+PG Sbjct: 407 GHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRG--VVIEGYPTIVLYPGGKKSES 464 Query: 228 KYPSEKRDVQSLLAFV 181 R + SL F+ Sbjct: 465 VVYQGSRSLDSLFDFI 480 Score = 24.6 bits (52), Expect(2) = 2.4 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -3 Query: 542 LAVLYAPWCPYCQ 504 L + YAPWC +C+ Sbjct: 398 LVLYYAPWCGHCK 410
>TXD13_MOUSE (Q8C0L0) Thioredoxin domain-containing protein 13 precursor| Length = 335 Score = 30.4 bits (67), Expect = 4.0 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 545 WLAVLYAPWCPYCQ 504 W+ YAPWCP CQ Sbjct: 51 WMLKFYAPWCPSCQ 64
>TXND1_MOUSE (Q8VBT0) Thioredoxin domain-containing protein 1 precursor| Length = 278 Score = 30.4 bits (67), Expect = 4.0 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 545 WLAVLYAPWCPYCQ 504 W+ YAPWCP CQ Sbjct: 47 WMIEFYAPWCPACQ 60
>TXND1_HUMAN (Q9H3N1) Thioredoxin domain-containing protein 1 precursor| (Transmembrane Trx-related protein) (Thioredoxin-related transmembrane protein) Length = 280 Score = 30.4 bits (67), Expect = 4.0 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 545 WLAVLYAPWCPYCQ 504 W+ YAPWCP CQ Sbjct: 47 WMIEFYAPWCPACQ 60
>TXD13_HUMAN (Q9H1E5) Thioredoxin domain-containing protein 13 precursor| Length = 349 Score = 30.4 bits (67), Expect = 4.0 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 545 WLAVLYAPWCPYCQ 504 W+ YAPWCP CQ Sbjct: 55 WMLKFYAPWCPSCQ 68
>ENPP3_HUMAN (O14638) Ectonucleotide pyrophosphatase/phosphodiesterase 3 (E-NPP| 3) (Phosphodiesterase I/nucleotide pyrophosphatase 3) (Phosphodiesterase I beta) (PD-Ibeta) (CD203c antigen) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide p Length = 875 Score = 30.0 bits (66), Expect = 5.2 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Frame = +2 Query: 122 RHQCRERWFSGCLTTHLRVFTKARRDCTSLFSDGYLMGFTV------RPGKRRIVGKLCS 283 R +C + F G V K R DC F D + + R G+ R+ LCS Sbjct: 55 RKKCFDASFRGLENCRCDVACKDRGDCCWDFEDTCVESTRIWMCNKFRCGETRLEASLCS 114 Query: 284 CSSAC 298 CS C Sbjct: 115 CSDDC 119
>PDIA6_RAT (Q63081) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)| (Protein disulfide isomerase P5) (Calcium-binding protein 1) (CaBP1) (Thioredoxin domain-containing protein 7) Length = 440 Score = 29.6 bits (65), Expect = 6.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 545 WLAVLYAPWCPYCQ 504 WL YAPWC +CQ Sbjct: 46 WLVEFYAPWCGHCQ 59
>PDIA6_PONPY (Q5R6T1) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)| Length = 440 Score = 29.6 bits (65), Expect = 6.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 545 WLAVLYAPWCPYCQ 504 WL YAPWC +CQ Sbjct: 46 WLVEFYAPWCGHCQ 59
>PDIA6_MOUSE (Q922R8) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)| (Thioredoxin domain-containing protein 7) Length = 440 Score = 29.6 bits (65), Expect = 6.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 545 WLAVLYAPWCPYCQ 504 WL YAPWC +CQ Sbjct: 46 WLVEFYAPWCGHCQ 59
>PDIA6_HUMAN (Q15084) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)| (Protein disulfide isomerase P5) (Thioredoxin domain-containing protein 7) Length = 440 Score = 29.6 bits (65), Expect = 6.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 545 WLAVLYAPWCPYCQ 504 WL YAPWC +CQ Sbjct: 46 WLVEFYAPWCGHCQ 59
>TIGA_ASPNG (Q00216) Protein disulfide-isomerase tigA precursor (EC 5.3.4.1)| Length = 359 Score = 29.6 bits (65), Expect = 6.7 Identities = 16/56 (28%), Positives = 26/56 (46%) Frame = -2 Query: 345 IKVAKFRADGEQKSFAQAELQLQSFPTILLFPGRTVKPIKYPSEKRDVQSLLAFVN 178 + +AK AD E E + +PTI FP + + + Y R Q+ + F+N Sbjct: 192 VVIAKVDADAENGKATAREQGVSGYPTIKFFPKGSTESVPYEG-ARSEQAFIDFLN 246
>PDIA6_MESAU (P38660) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)| (Protein disulfide isomerase P5) Length = 439 Score = 29.6 bits (65), Expect = 6.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 545 WLAVLYAPWCPYCQ 504 WL YAPWC +CQ Sbjct: 46 WLVEFYAPWCGHCQ 59
>AMYI_SACDI (P29760) Glucoamylase S2 precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) (GAII) Length = 768 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +2 Query: 242 VRPGKRRIVGKLCSCSSACANDF---CSPSARNLATLMPEPLSCSASST*DASIACTTPY 412 + P I +CS + A + CSP + + T +P S S +++ + + TTP Sbjct: 93 ITPSTTTITTTVCSTGTNSAGETTSGCSP--KTITTTVPCSTSPSETASESTTTSPTTPV 150 Query: 413 TTIVSASHV 439 TT+VS + V Sbjct: 151 TTVVSTTVV 159
>AMYH_SACDI (P04065) Glucoamylase S1 precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) (GAI) Length = 767 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +2 Query: 242 VRPGKRRIVGKLCSCSSACANDF---CSPSARNLATLMPEPLSCSASST*DASIACTTPY 412 + P I +CS + A + CSP + + T +P S S +++ + + TTP Sbjct: 93 ITPSTTTITTTVCSTGTNSAGETTSGCSP--KTITTTVPCSTSPSETASESTTTSPTTPV 150 Query: 413 TTIVSASHV 439 TT+VS + V Sbjct: 151 TTVVSTTVV 159
>TXD10_XENLA (Q6GNG3) Protein disulfide-isomerase TXNDC10 precursor (EC 5.3.4.1)| (Thioredoxin domain-containing protein 10) Length = 452 Score = 29.3 bits (64), Expect = 8.8 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%) Frame = -3 Query: 563 ENRAEP-WLAVLYAPWCPYCQ 504 ENR + WL YAPWC +C+ Sbjct: 37 ENRKDDIWLVDFYAPWCGHCK 57
>DPSA_HALSA (Q9HMP7) Iron-rich dpsA-homolog protein (Bacterioferritin dpsA)| Length = 182 Score = 29.3 bits (64), Expect = 8.8 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -2 Query: 495 TLRSQVLLDSISNYIQELRTWLAETIVVYGVVQAMEASYVELAEQL 358 TL+++ +D + ++RT LA + +YG + + ELAE L Sbjct: 98 TLQAEASVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTELAENL 143
>PDI2_CAEEL (Q17770) Protein disulfide-isomerase 2 precursor (EC 5.3.4.1) (PDI| 1) (Prolyl 4-hydroxylase beta subunit) Length = 493 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -2 Query: 291 ELQLQSFPTILLFPGRTVKPIKYPSEKRDVQSLLAFVNT 175 ++++QSFPTI FP + K + Y + R ++ F+ T Sbjct: 430 DVKIQSFPTIKFFPAGSNKVVDYTGD-RTIEGFTKFLET 467
>MAF1_CANGA (Q6FIZ7) Repressor of RNA polymerase III transcription MAF1| Length = 391 Score = 29.3 bits (64), Expect = 8.8 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 1/119 (0%) Frame = -2 Query: 531 IRSLVPVLPGTSTLRSQVLLDSISNYIQELRTWLAETIVVYGVVQAMEASYVELAEQLSG 352 + LVP + TS L L + +SNY + + + + + +S LS Sbjct: 127 VADLVPPIIKTSKLNDHNLKELVSNYEAGYSSSSSVESLTHKNKERRTSS-------LSS 179 Query: 351 SGIKVAKFRADGEQKSFAQAELQL-QSFPTILLFPGRTVKPIKYPSEKRDVQSLLAFVN 178 +G KV K RAD + A L + T+ L P PI PS +R L+A +N Sbjct: 180 TGGKVDKLRADSSTANDITARSVLNDTSRTLNLGP---FGPINEPSSRRTFAYLIAILN 235
>SSG1_ARATH (Q9MAQ0) Probable granule-bound starch synthase 1, chloroplast| precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) Length = 610 Score = 29.3 bits (64), Expect = 8.8 Identities = 19/69 (27%), Positives = 31/69 (44%) Frame = -2 Query: 534 PIRSLVPVLPGTSTLRSQVLLDSISNYIQELRTWLAETIVVYGVVQAMEASYVELAEQLS 355 P+ VPV+ L Q D + I + + +++ + MEA +EL E+ Sbjct: 396 PVDRDVPVIGFIGRLEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFP 455 Query: 354 GSGIKVAKF 328 G + VAKF Sbjct: 456 GKAVGVAKF 464 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,198,080 Number of Sequences: 219361 Number of extensions: 1472506 Number of successful extensions: 4852 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 4629 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4849 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
