ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8n05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome... 212 8e-52
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 212 8e-52
3ref|XM_475657.1| Oryza sativa (japonica cultivar-group), predic... 210 3e-51
4ref|NM_184511.1| Oryza sativa (japonica cultivar-group), mRNA 149 1e-32
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
6dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 103 5e-19
8gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
10ref|NM_190413.1| Oryza sativa (japonica cultivar-group), predic... 94 5e-16
11dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
12dbj|AK111090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
13ref|NM_184654.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
14gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genom... 72 2e-09
15ref|XM_474003.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
16emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4,... 64 4e-07
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
18dbj|AK108022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
19emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 64 4e-07
20emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 64 4e-07
21emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4,... 64 4e-07
22gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
23dbj|AK109305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
24gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
25dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
26gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
27gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 0.42
28gb|AC122342.4| Mus musculus BAC clone RP23-357O17 from chromosom... 42 1.6
29gb|DQ397625.1| Cenarchaeum symbiosum clone C20B06, complete sequ... 42 1.6
30dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
31dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
32dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 1.6
33gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosom... 42 1.6
34ref|XM_482849.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
35gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
36gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
37gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
38gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
39gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 gen... 40 6.5
40dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.5
41tpg|BK000940.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M332,... 40 6.5
42gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosom... 40 6.5
43emb|AL929602.3|CNS08CCH Human chromosome 14 DNA sequence BAC C-2... 40 6.5
44gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.5
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
47dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
48dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
49gb|AF497482.1| Micromonospora echinospora calicheamicin biosynth... 40 6.5
50dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
51dbj|AK121788.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
52dbj|AK108155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
53dbj|AK073548.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
54dbj|AK071599.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
55dbj|AK068850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
56gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.5
57gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
58gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
59emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111... 40 6.5

>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0027N19, complete sequence
          Length = 141368

 Score =  212 bits (107), Expect = 8e-52
 Identities = 152/167 (91%)
 Strand = Plus / Plus

                                                                         
Query: 62    aatgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacct 121
             ||||||||| ||| |||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 93562 aatgggcaacagcctgagatgctgcctagcttgcgtcctcccctgcggcgccctcgacct 93621

                                                                         
Query: 122   gatcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccgg 181
             |||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||
Sbjct: 93622 gatcaggatcgtccacctcaacggccgcgtcgaggagtacgggcgcccggtcgccgccgg 93681

                                                            
Query: 182   cgagatcctctccgctaacccaaaccacgtgctgagcaagccgtgct 228
             |||||||||| |||| ||||| |||||||| || |||||||||||||
Sbjct: 93682 cgagatcctcgccgccaaccccaaccacgtcctcagcaagccgtgct 93728



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                         
Query: 252   ctcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcccggcg 311
             ||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| 
Sbjct: 93767 ctcatcgtctcgccggactccgagctggagcgcggcgagatctacttcctcatcccggcc 93826

                          
Query: 312   tcctcggtgccgg 324
             ||||| |||||||
Sbjct: 93827 tcctccgtgccgg 93839



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  212 bits (107), Expect = 8e-52
 Identities = 152/167 (91%)
 Strand = Plus / Plus

                                                                           
Query: 62      aatgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacct 121
               ||||||||| ||| |||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 3772632 aatgggcaacagcctgagatgctgcctagcttgcgtcctcccctgcggcgccctcgacct 3772691

                                                                           
Query: 122     gatcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccgg 181
               |||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||
Sbjct: 3772692 gatcaggatcgtccacctcaacggccgcgtcgaggagtacgggcgcccggtcgccgccgg 3772751

                                                              
Query: 182     cgagatcctctccgctaacccaaaccacgtgctgagcaagccgtgct 228
               |||||||||| |||| ||||| |||||||| || |||||||||||||
Sbjct: 3772752 cgagatcctcgccgccaaccccaaccacgtcctcagcaagccgtgct 3772798



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                           
Query: 252     ctcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcccggcg 311
               ||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| 
Sbjct: 3772837 ctcatcgtctcgccggactccgagctggagcgcggcgagatctacttcctcatcccggcc 3772896

                            
Query: 312     tcctcggtgccgg 324
               ||||| |||||||
Sbjct: 3772897 tcctccgtgccgg 3772909



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                            
Query: 81       tgctgcctggcttgcgtgctcccctgcggcgcgctggacctgatcaggatcgtccacctc 140
                ||||||||||| ||| |||||||||||||||| || ||| |  || |  |||| ||||||
Sbjct: 23162428 tgctgcctggcctgcatgctcccctgcggcgccctcgacgtcgtccgcgtcgtgcacctc 23162487

                                   
Query: 141      agcggccgcgtcgaggagt 159
                |||||||||||||| ||||
Sbjct: 23162488 agcggccgcgtcgacgagt 23162506



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 253      tcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
                ||||||| |||||||| ||||||||  |||||||||  || ||||||||||||||
Sbjct: 23162624 tcatcgtgtccccggactccgagctcaagcgcggccgcatctacttcctcatccc 23162678



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 166      ggccggtcgccgccggcgag 185
                ||||||||||||||||||||
Sbjct: 23264508 ggccggtcgccgccggcgag 23264489



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 381      ccgtcggcggcgaaccctgg 400
                ||||||||||||||||||||
Sbjct: 15458412 ccgtcggcggcgaaccctgg 15458431



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>ref|XM_475657.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 513

 Score =  210 bits (106), Expect = 3e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                       
Query: 63  atgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctg 122
           |||||||| ||| |||| |||||||| |||||||| |||||||||||||| || ||||||
Sbjct: 1   atgggcaacagcctgagatgctgcctagcttgcgtcctcccctgcggcgccctcgacctg 60

                                                                       
Query: 123 atcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccggc 182
           ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||
Sbjct: 61  atcaggatcgtccacctcaacggccgcgtcgaggagtacgggcgcccggtcgccgccggc 120

                                                         
Query: 183 gagatcctctccgctaacccaaaccacgtgctgagcaagccgtgct 228
           ||||||||| |||| ||||| |||||||| || |||||||||||||
Sbjct: 121 gagatcctcgccgccaaccccaaccacgtcctcagcaagccgtgct 166



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                       
Query: 252 ctcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcccggcg 311
           ||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| 
Sbjct: 205 ctcatcgtctcgccggactccgagctggagcgcggcgagatctacttcctcatcccggcc 264

                        
Query: 312 tcctcggtgccgg 324
           ||||| |||||||
Sbjct: 265 tcctccgtgccgg 277



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>ref|NM_184511.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 513

 Score =  149 bits (75), Expect = 1e-32
 Identities = 197/238 (82%), Gaps = 6/238 (2%)
 Strand = Plus / Plus

                                                                       
Query: 76  tgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctgatcaggatcgtcc 135
           |||| ||||||||||| |||||||| || |||||||||||||||||| || ||||||| |
Sbjct: 14  tgagatgctgcctggcgtgcgtgctgccgtgcggcgcgctggacctggtccggatcgtgc 73

                                                                       
Query: 136 acctcagcggccgcgtcgaggagtacggccggccggtcgccgccggcgagatcctctccg 195
           ||||||||||||||||||| |||||||||||  | ||  ||||||||||| | ||  | |
Sbjct: 74  acctcagcggccgcgtcgacgagtacggccgcgccgtgtccgccggcgaggtgctggcgg 133

                                                                       
Query: 196 ctaacccaaaccacgtgctgagcaagccgtgctc------gcagggcgtcgtgcggagga 249
           |  |||| |||||||| ||||||  |||||||||      |||||| |  | | || |||
Sbjct: 134 cgcaccccaaccacgttctgagccggccgtgctcgtcgcagcagggggcggcggggcgga 193

                                                                     
Query: 250 tactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
           |||||||||| || |||||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 194 tactcatcgtgtcgccggagtcggagctggagcgcggcgagatctacttcctcatccc 251



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  149 bits (75), Expect = 1e-32
 Identities = 197/238 (82%), Gaps = 6/238 (2%)
 Strand = Plus / Plus

                                                                           
Query: 76      tgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctgatcaggatcgtcc 135
               |||| ||||||||||| |||||||| || |||||||||||||||||| || ||||||| |
Sbjct: 3375606 tgagatgctgcctggcgtgcgtgctgccgtgcggcgcgctggacctggtccggatcgtgc 3375665

                                                                           
Query: 136     acctcagcggccgcgtcgaggagtacggccggccggtcgccgccggcgagatcctctccg 195
               ||||||||||||||||||| |||||||||||  | ||  ||||||||||| | ||  | |
Sbjct: 3375666 acctcagcggccgcgtcgacgagtacggccgcgccgtgtccgccggcgaggtgctggcgg 3375725

                                                                           
Query: 196     ctaacccaaaccacgtgctgagcaagccgtgctc------gcagggcgtcgtgcggagga 249
               |  |||| |||||||| ||||||  |||||||||      |||||| |  | | || |||
Sbjct: 3375726 cgcaccccaaccacgttctgagccggccgtgctcgtcgcagcagggggcggcggggcgga 3375785

                                                                         
Query: 250     tactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
               |||||||||| || |||||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 3375786 tactcatcgtgtcgccggagtcggagctggagcgcggcgagatctacttcctcatccc 3375843



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 122/147 (82%)
 Strand = Plus / Minus

                                                                            
Query: 63       atgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctg 122
                |||||||| ||| || ||||||||||||| ||||| ||||||||||| ||||| ||| | 
Sbjct: 35372792 atgggcaacagcctgcggtgctgcctggcctgcgtcctcccctgcggagcgctcgacgtc 35372733

                                                                            
Query: 123      atcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccggc 182
                 || | ||||||||||||||||||| |||||| |||| | || | |||||| ||||||||
Sbjct: 35372732 gtccgcatcgtccacctcagcggccacgtcgacgagttcagctgcccggtcaccgccggc 35372673

                                           
Query: 183      gagatcctctccgctaacccaaaccac 209
                |   ||||| ||||| |||| ||||||
Sbjct: 35372672 gccgtcctcgccgctcaccccaaccac 35372646



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                       
Query: 253      tcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
                |||||||||| || || ||||||||  |||||||||  || ||||||||||||||
Sbjct: 35372590 tcatcgtctcgcccgactccgagctcaagcgcggccgcatctacttcctcatccc 35372536



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 164     ccggccggtcgccgccggcga 184
               |||||||||||||||||||||
Sbjct: 6395817 ccggccggtcgccgccggcga 6395837



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 167      gccggtcgccgccggcgaga 186
                ||||||||||||||||||||
Sbjct: 20208902 gccggtcgccgccggcgaga 20208883



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>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0701D05
          Length = 172161

 Score =  149 bits (75), Expect = 1e-32
 Identities = 197/238 (82%), Gaps = 6/238 (2%)
 Strand = Plus / Plus

                                                                         
Query: 76    tgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctgatcaggatcgtcc 135
             |||| ||||||||||| |||||||| || |||||||||||||||||| || ||||||| |
Sbjct: 53976 tgagatgctgcctggcgtgcgtgctgccgtgcggcgcgctggacctggtccggatcgtgc 54035

                                                                         
Query: 136   acctcagcggccgcgtcgaggagtacggccggccggtcgccgccggcgagatcctctccg 195
             ||||||||||||||||||| |||||||||||  | ||  ||||||||||| | ||  | |
Sbjct: 54036 acctcagcggccgcgtcgacgagtacggccgcgccgtgtccgccggcgaggtgctggcgg 54095

                                                                         
Query: 196   ctaacccaaaccacgtgctgagcaagccgtgctc------gcagggcgtcgtgcggagga 249
             |  |||| |||||||| ||||||  |||||||||      |||||| |  | | || |||
Sbjct: 54096 cgcaccccaaccacgttctgagccggccgtgctcgtcgcagcagggggcggcggggcgga 54155

                                                                       
Query: 250   tactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
             |||||||||| || |||||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 54156 tactcatcgtgtcgccggagtcggagctggagcgcggcgagatctacttcctcatccc 54213



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  103 bits (52), Expect = 5e-19
 Identities = 154/188 (81%)
 Strand = Plus / Plus

                                                                            
Query: 63       atgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctg 122
                |||||||| ||| |||| ||||||||||| ||||| |||||||||||| |  | ||| ||
Sbjct: 10424236 atgggcaacagcctgagatgctgcctggcctgcgtcctcccctgcggctccttcgacgtg 10424295

                                                                            
Query: 123      atcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccggc 182
                 || | ||||||||||||| ||||| | ||||||||||||  || |||||| ||||||||
Sbjct: 10424296 gtccgcatcgtccacctcaacggccacatcgaggagtacgcgcgcccggtcaccgccggc 10424355

                                                                            
Query: 183      gagatcctctccgctaacccaaaccacgtgctgagcaagccgtgctcgcagggcgtcgtg 242
                ||| || || ||||  |||| | |||||| ||||||  ||||||||| ||||||| || |
Sbjct: 10424356 gaggtcgtcgccgcgcacccgagccacgtcctgagccggccgtgctcccagggcggcgcg 10424415

                        
Query: 243      cggaggat 250
                ||| ||||
Sbjct: 10424416 cggcggat 10424423



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 247      ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
                |||||| |||||| || ||||||||  |||||||||||||| |||| |||||||||||||
Sbjct: 18460161 ggatacacatcgtgtcgccggagtcgaagctggagcgcggcgagatctacttcctcatcc 18460220

                    
Query: 307      cggc 310
                ||||
Sbjct: 18460221 cggc 18460224



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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score =  103 bits (52), Expect = 5e-19
 Identities = 154/188 (81%)
 Strand = Plus / Plus

                                                                         
Query: 63    atgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctg 122
             |||||||| ||| |||| ||||||||||| ||||| |||||||||||| |  | ||| ||
Sbjct: 80789 atgggcaacagcctgagatgctgcctggcctgcgtcctcccctgcggctccttcgacgtg 80848

                                                                         
Query: 123   atcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccggc 182
              || | ||||||||||||| ||||| | ||||||||||||  || |||||| ||||||||
Sbjct: 80849 gtccgcatcgtccacctcaacggccacatcgaggagtacgcgcgcccggtcaccgccggc 80908

                                                                         
Query: 183   gagatcctctccgctaacccaaaccacgtgctgagcaagccgtgctcgcagggcgtcgtg 242
             ||| || || ||||  |||| | |||||| ||||||  ||||||||| ||||||| || |
Sbjct: 80909 gaggtcgtcgccgcgcacccgagccacgtcctgagccggccgtgctcccagggcggcgcg 80968

                     
Query: 243   cggaggat 250
             ||| ||||
Sbjct: 80969 cggcggat 80976



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  103 bits (52), Expect = 5e-19
 Identities = 154/188 (81%)
 Strand = Plus / Plus

                                                                            
Query: 63       atgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctg 122
                |||||||| ||| |||| ||||||||||| ||||| |||||||||||| |  | ||| ||
Sbjct: 10422337 atgggcaacagcctgagatgctgcctggcctgcgtcctcccctgcggctccttcgacgtg 10422396

                                                                            
Query: 123      atcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccggc 182
                 || | ||||||||||||| ||||| | ||||||||||||  || |||||| ||||||||
Sbjct: 10422397 gtccgcatcgtccacctcaacggccacatcgaggagtacgcgcgcccggtcaccgccggc 10422456

                                                                            
Query: 183      gagatcctctccgctaacccaaaccacgtgctgagcaagccgtgctcgcagggcgtcgtg 242
                ||| || || ||||  |||| | |||||| ||||||  ||||||||| ||||||| || |
Sbjct: 10422457 gaggtcgtcgccgcgcacccgagccacgtcctgagccggccgtgctcccagggcggcgcg 10422516

                        
Query: 243      cggaggat 250
                ||| ||||
Sbjct: 10422517 cggcggat 10422524



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 247      ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
                |||||| |||||| || ||||||||  |||||||||||||| |||| |||||||||||||
Sbjct: 18454202 ggatacacatcgtgtcgccggagtcgaagctggagcgcggcgagatctacttcctcatcc 18454261

                    
Query: 307      cggc 310
                ||||
Sbjct: 18454262 cggc 18454265



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>ref|NM_190413.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 516

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 122/147 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  atgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctg 122
           |||||||| ||| || ||||||||||||| ||||| ||||||||||| ||||| ||| | 
Sbjct: 1   atgggcaacagcctgcggtgctgcctggcctgcgtcctcccctgcggagcgctcgacgtc 60

                                                                       
Query: 123 atcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccggc 182
            || | ||||||||||||||||||| |||||| |||| | || | |||||| ||||||||
Sbjct: 61  gtccgcatcgtccacctcagcggccacgtcgacgagttcagctgcccggtcaccgccggc 120

                                      
Query: 183 gagatcctctccgctaacccaaaccac 209
           |   ||||| ||||| |||| ||||||
Sbjct: 121 gccgtcctcgccgctcaccccaaccac 147



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 253 tcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
           |||||||||| || || ||||||||  |||||||||  || ||||||||||||||
Sbjct: 203 tcatcgtctcgcccgactccgagctcaagcgcggccgcatctacttcctcatccc 257



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>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0439E11
          Length = 146083

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 122/147 (82%)
 Strand = Plus / Minus

                                                                          
Query: 63     atgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctg 122
              |||||||| ||| || ||||||||||||| ||||| ||||||||||| ||||| ||| | 
Sbjct: 136653 atgggcaacagcctgcggtgctgcctggcctgcgtcctcccctgcggagcgctcgacgtc 136594

                                                                          
Query: 123    atcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccggc 182
               || | ||||||||||||||||||| |||||| |||| | || | |||||| ||||||||
Sbjct: 136593 gtccgcatcgtccacctcagcggccacgtcgacgagttcagctgcccggtcaccgccggc 136534

                                         
Query: 183    gagatcctctccgctaacccaaaccac 209
              |   ||||| ||||| |||| ||||||
Sbjct: 136533 gccgtcctcgccgctcaccccaaccac 136507



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                     
Query: 253    tcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
              |||||||||| || || ||||||||  |||||||||  || ||||||||||||||
Sbjct: 136451 tcatcgtctcgcccgactccgagctcaagcgcggccgcatctacttcctcatccc 136397



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>dbj|AK111090.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-G01, full
           insert sequence
          Length = 894

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 122/147 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  atgggcaatagcttgaggtgctgcctggcttgcgtgctcccctgcggcgcgctggacctg 122
           |||||||| ||| || ||||||||||||| ||||| ||||||||||| ||||| ||| | 
Sbjct: 94  atgggcaacagcctgcggtgctgcctggcctgcgtcctcccctgcggagcgctcgacgtc 153

                                                                       
Query: 123 atcaggatcgtccacctcagcggccgcgtcgaggagtacggccggccggtcgccgccggc 182
            || | ||||||||||||||||||| |||||| |||| | || | |||||| ||||||||
Sbjct: 154 gtccgcatcgtccacctcagcggccacgtcgacgagttcagctgcccggtcaccgccggc 213

                                      
Query: 183 gagatcctctccgctaacccaaaccac 209
           |   ||||| ||||| |||| ||||||
Sbjct: 214 gccgtcctcgccgctcaccccaaccac 240



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 253 tcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
           |||||||||| || || ||||||||  |||||||||  || ||||||||||||||
Sbjct: 296 tcatcgtctcgcccgactccgagctcaagcgcggccgcatctacttcctcatccc 350



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>ref|NM_184654.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 438

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 247 ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
           |||||| |||||| || ||||||||  |||||||||||||| |||| |||||||||||||
Sbjct: 170 ggatacacatcgtgtcgccggagtcgaagctggagcgcggcgagatctacttcctcatcc 229

               
Query: 307 cggc 310
           ||||
Sbjct: 230 cggc 233



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>gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genomic sequence, complete
             sequence
          Length = 90673

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                         
Query: 247   ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
             |||||| |||||| || ||||||||  |||||||||||||| |||| |||||||||||||
Sbjct: 21054 ggatacacatcgtgtcgccggagtcgaagctggagcgcggcgagatctacttcctcatcc 20995

                 
Query: 307   cggc 310
             ||||
Sbjct: 20994 cggc 20991



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>ref|XM_474003.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 480

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 247 ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
           |||||| |||||| || ||||||||  |||||||| ||||| |||| |||||||||||||
Sbjct: 272 ggatacacatcgtgtcgccggagtcgaagctggagtgcggcgagatctacttcctcatcc 213

               
Query: 307 cggc 310
           ||||
Sbjct: 212 cggc 209



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>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13,
             complete sequence
          Length = 127135

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 247   ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
             |||||| |||||| || ||||||||  |||||||| ||||| |||| |||||||||||||
Sbjct: 13208 ggatacacatcgtgtcgccggagtcgaagctggagtgcggcgagatctacttcctcatcc 13267

                 
Query: 307   cggc 310
             ||||
Sbjct: 13268 cggc 13271



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                            
Query: 247      ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
                |||||| |||||| || ||||||||  |||||||| ||||| |||| |||||||||||||
Sbjct: 32117519 ggatacacatcgtgtcgccggagtcgaagctggagtgcggcgagatctacttcctcatcc 32117578

                    
Query: 307      cggc 310
                ||||
Sbjct: 32117579 cggc 32117582



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>dbj|AK108022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-136-A04, full
           insert sequence
          Length = 702

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 247 ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
           |||||| |||||| || ||||||||  |||||||| ||||| |||| |||||||||||||
Sbjct: 320 ggatacacatcgtgtcgccggagtcgaagctggagtgcggcgagatctacttcctcatcc 379

               
Query: 307 cggc 310
           ||||
Sbjct: 380 cggc 383



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>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete
             sequence
          Length = 94903

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 247   ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
             |||||| |||||| || ||||||||  |||||||| ||||| |||| |||||||||||||
Sbjct: 89155 ggatacacatcgtgtcgccggagtcgaagctggagtgcggcgagatctacttcctcatcc 89214

                 
Query: 307   cggc 310
             ||||
Sbjct: 89215 cggc 89218



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>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05,
           complete sequence
          Length = 62215

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 247 ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
           |||||| |||||| || ||||||||  |||||||| ||||| |||| |||||||||||||
Sbjct: 916 ggatacacatcgtgtcgccggagtcgaagctggagtgcggcgagatctacttcctcatcc 975

               
Query: 307 cggc 310
           ||||
Sbjct: 976 cggc 979



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>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
              complete sequence
          Length = 141752

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                          
Query: 247    ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
              |||||| |||||| || ||||||||  |||||||| ||||| |||| |||||||||||||
Sbjct: 138226 ggatacacatcgtgtcgccggagtcgaagctggagtgcggcgagatctacttcctcatcc 138285

                  
Query: 307    cggc 310
              ||||
Sbjct: 138286 cggc 138289



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>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                         
Query: 81    tgctgcctggcttgcgtgctcccctgcggcgcgctggacctgatcaggatcgtccacctc 140
             ||||||||||| ||| |||||||||||||||| || ||| |  || |  |||| ||||||
Sbjct: 94203 tgctgcctggcctgcatgctcccctgcggcgccctcgacgtcgtccgcgtcgtgcacctc 94262

                                
Query: 141   agcggccgcgtcgaggagt 159
             |||||||||||||| ||||
Sbjct: 94263 agcggccgcgtcgacgagt 94281



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 253   tcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
             ||||||| |||||||| ||||||||  |||||||||  || ||||||||||||||
Sbjct: 94399 tcatcgtgtccccggactccgagctcaagcgcggccgcatctacttcctcatccc 94453



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>dbj|AK109305.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-E04, full
           insert sequence
          Length = 744

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                       
Query: 81  tgctgcctggcttgcgtgctcccctgcggcgcgctggacctgatcaggatcgtccacctc 140
           ||||||||||| ||| |||||||||||||||| || ||| |  || |  |||| ||||||
Sbjct: 128 tgctgcctggcctgcatgctcccctgcggcgccctcgacgtcgtccgcgtcgtgcacctc 187

                              
Query: 141 agcggccgcgtcgaggagt 159
           |||||||||||||| ||||
Sbjct: 188 agcggccgcgtcgacgagt 206



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 253 tcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatccc 307
           ||||||| |||||||| ||||||||  |||||||||  || ||||||||||||||
Sbjct: 324 tcatcgtgtccccggactccgagctcaagcgcggccgcatctacttcctcatccc 378



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>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0078F08, complete sequence
          Length = 165440

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                         
Query: 247   ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
             |||||| |||||| || ||||||||  ||||||||| |||| |||| |||||||||||||
Sbjct: 70065 ggatacacatcgtgtcgccggagtcgaagctggagc-cggcgagatctacttcctcatcc 70123

                 
Query: 307   cggc 310
             ||||
Sbjct: 70124 cggc 70127



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                            
Query: 247      ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
                |||||| |||||| || ||||||||  ||||||||| |||| |||| |||||||||||||
Sbjct: 18490750 ggatacacatcgtgtcgccggagtcgaagctggagc-cggcgagatctacttcctcatcc 18490808

                    
Query: 307      cggc 310
                ||||
Sbjct: 18490809 cggc 18490812



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      gccggtcgccgccggcgaga 186
                ||||||||||||||||||||
Sbjct: 27146890 gccggtcgccgccggcgaga 27146909



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 167      gccggtcgccgccggcgaga 186
                ||||||||||||||||||||
Sbjct: 12115044 gccggtcgccgccggcgaga 12115025



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                            
Query: 247      ggatactcatcgtctccccggagtccgagctggagcgcggccagatatacttcctcatcc 306
                |||||| |||||| || ||||||||  ||||||||| |||| |||| |||||||||||||
Sbjct: 18650151 ggatacacatcgtgtcgccggagtcgaagctggagc-cggcgagatctacttcctcatcc 18650209

                    
Query: 307      cggc 310
                ||||
Sbjct: 18650210 cggc 18650213



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      gccggtcgccgccggcgaga 186
                ||||||||||||||||||||
Sbjct: 27473943 gccggtcgccgccggcgaga 27473962



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 167      gccggtcgccgccggcgaga 186
                ||||||||||||||||||||
Sbjct: 12194351 gccggtcgccgccggcgaga 12194332



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 214     tgagcaagccgtgctcgcagggcgtc 239
               ||||||||||||||||| ||||||||
Sbjct: 3978625 tgagcaagccgtgctcgaagggcgtc 3978650



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>gb|AC122342.4| Mus musculus BAC clone RP23-357O17 from chromosome 8, complete sequence
          Length = 199412

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 9      caaccagctaggctagctctg 29
              |||||||||||||||||||||
Sbjct: 129743 caaccagctaggctagctctg 129723



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>gb|DQ397625.1| Cenarchaeum symbiosum clone C20B06, complete sequence
          Length = 45713

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 86   cctggcttgcgtgctcccctgcggc 110
            |||||||||||||||||||| ||||
Sbjct: 5398 cctggcttgcgtgctcccctccggc 5422



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>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665D10
          Length = 134967

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   ccggccggtcgccgccggcga 184
             |||||||||||||||||||||
Sbjct: 18212 ccggccggtcgccgccggcga 18232



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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0515G01
          Length = 175072

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    ccggccggtcgccgccggcga 184
              |||||||||||||||||||||
Sbjct: 166883 ccggccggtcgccgccggcga 166903



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 398     tggccacggcggcaagacccg 418
               |||||||||||||||||||||
Sbjct: 2288532 tggccacggcggcaagacccg 2288552



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>gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosome 8, complete
            sequence
          Length = 214760

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 9    caaccagctaggctagctctg 29
            |||||||||||||||||||||
Sbjct: 5529 caaccagctaggctagctctg 5509



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>ref|XM_482849.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 888

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 gccggccggtcgccgccggc 182
           ||||||||||||||||||||
Sbjct: 803 gccggccggtcgccgccggc 784



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>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04,
              complete sequence
          Length = 168424

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    ccgtcggcggcgaaccctgg 400
              ||||||||||||||||||||
Sbjct: 113433 ccgtcggcggcgaaccctgg 113452



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>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01,
             complete sequence
          Length = 182504

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   gccggtcgccgccggcgaga 186
             ||||||||||||||||||||
Sbjct: 53028 gccggtcgccgccggcgaga 53047



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>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09,
             complete sequence
          Length = 148740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   ggccggtcgccgccggcgag 185
             ||||||||||||||||||||
Sbjct: 88565 ggccggtcgccgccggcgag 88546



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>gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0047M04, complete sequence
          Length = 109523

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   gccggtcgccgccggcgaga 186
             ||||||||||||||||||||
Sbjct: 97943 gccggtcgccgccggcgaga 97962



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>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete
             sequence
          Length = 134102

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   ccggtcgccgccggcgagat 187
             ||||||||||||||||||||
Sbjct: 55540 ccggtcgccgccggcgagat 55521



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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    agacaccgtcggcggcgaac 395
              ||||||||||||||||||||
Sbjct: 332645 agacaccgtcggcggcgaac 332664



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>tpg|BK000940.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M332, complete sequence
          Length = 14546

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  gccggtcgccgccggcgaga 186
            ||||||||||||||||||||
Sbjct: 8651 gccggtcgccgccggcgaga 8632



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>gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosome 17, complete sequence
          Length = 245262

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    agaggaagaagaagaccggc 347
              ||||||||||||||||||||
Sbjct: 104693 agaggaagaagaagaccggc 104712



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>emb|AL929602.3|CNS08CCH Human chromosome 14 DNA sequence BAC C-2314B22 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 137135

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    cacggcggcaagacccgtag 421
              ||||||||||||||||||||
Sbjct: 131396 cacggcggcaagacccgtag 131377



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    ccggccggtcgccgccggcg 183
              ||||||||||||||||||||
Sbjct: 950668 ccggccggtcgccgccggcg 950649



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 140     cagcggccgcgtcgaggagt 159
               ||||||||||||||||||||
Sbjct: 9579585 cagcggccgcgtcgaggagt 9579566



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      ccggtcgccgccggcgagat 187
                ||||||||||||||||||||
Sbjct: 20415392 ccggtcgccgccggcgagat 20415373



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 163      gccggccggtcgccgccggc 182
                ||||||||||||||||||||
Sbjct: 22920448 gccggccggtcgccgccggc 22920467



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>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0051H17
          Length = 187471

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    gccggtcgccgccggcgaga 186
              ||||||||||||||||||||
Sbjct: 115280 gccggtcgccgccggcgaga 115261



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>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete
             sequence
          Length = 90348

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   cggccggccggtcgccgccg 180
             ||||||||||||||||||||
Sbjct: 21660 cggccggccggtcgccgccg 21679



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>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0104B02
          Length = 169588

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   gccggccggtcgccgccggc 182
             ||||||||||||||||||||
Sbjct: 94286 gccggccggtcgccgccggc 94305



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>dbj|AK121788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094F11, full
           insert sequence
          Length = 1930

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 cagcggccgcgtcgaggagt 159
           ||||||||||||||||||||
Sbjct: 483 cagcggccgcgtcgaggagt 464



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>dbj|AK108155.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-G06, full
           insert sequence
          Length = 924

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 ccgtcggcggcgaaccctgg 400
           ||||||||||||||||||||
Sbjct: 101 ccgtcggcggcgaaccctgg 82



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>dbj|AK073548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C05, full
           insert sequence
          Length = 1078

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 ggccggtcgccgccggcgag 185
           ||||||||||||||||||||
Sbjct: 777 ggccggtcgccgccggcgag 796



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>dbj|AK071599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107I12, full
            insert sequence
          Length = 1906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 140  cagcggccgcgtcgaggagt 159
            ||||||||||||||||||||
Sbjct: 1111 cagcggccgcgtcgaggagt 1130



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>dbj|AK068850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169H09, full
           insert sequence
          Length = 3543

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 ccggtcgccgccggcgagat 187
           ||||||||||||||||||||
Sbjct: 18  ccggtcgccgccggcgagat 37



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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    agacaccgtcggcggcgaac 395
              ||||||||||||||||||||
Sbjct: 344722 agacaccgtcggcggcgaac 344741



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      ccggtcgccgccggcgagat 187
                ||||||||||||||||||||
Sbjct: 20426664 ccggtcgccgccggcgagat 20426645



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 140     cagcggccgcgtcgaggagt 159
               ||||||||||||||||||||
Sbjct: 9579470 cagcggccgcgtcgaggagt 9579451



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>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165137

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   cagcggccgcgtcgaggagt 159
             ||||||||||||||||||||
Sbjct: 42896 cagcggccgcgtcgaggagt 42877


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,706,933
Number of Sequences: 3902068
Number of extensions: 3706933
Number of successful extensions: 90581
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 88814
Number of HSP's gapped (non-prelim): 1764
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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