>SEC16_SCHPO (O14029) Multidomain vesicle coat protein|
          Length = 1995

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -1

Query: 471  PPPVFLAEIS*HIPPASPPTNAPFASLPHALSPTAALAFS 352
            PPP  +A     +P A PP+ AP ++LP A  P  A A S
Sbjct: 1883 PPPPPMA-----LPKAGPPSAAPTSALPPAGPPAGATAIS 1917

>NRX3A_HUMAN (Q9Y4C0) Neurexin-3-alpha precursor (Neurexin III-alpha)|
          Length = 1541

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 30  LKDVEFREQPARVDLSRLAEIADTE 104
           LK+V ++    R++LSRLA IADT+
Sbjct: 405 LKEVVYKNNDIRLELSRLARIADTK 429

>CBIL_METJA (Q58181) Probable cobalt-precorrin-2 C(20)-methyltransferase (EC|
           2.1.1.151) (S-adenosyl-L-methionine--cobalt-precorrin-2
           methyltransferase)
          Length = 230

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 274 VRDKRLMTLLMTRILKKMQSMTVPPTGKGER 366
           V DK+L+TL    +LKK+  + VP + KG++
Sbjct: 15  VGDKKLLTLKALEVLKKVDKIFVPVSKKGKK 45

>TILS_THET8 (Q5SI38) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 507

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +3

Query: 354 KRRALRSEKAHGVSLQRERSLEEKLGEYVKKFQLETLAGGILCHVKTGRLFLAPDSP 524
           +RRALR      + L+ E  L   L E ++  + +TL GG+L   K G LFL P  P
Sbjct: 254 RRRALR-RLLEKLGLRPEARLVLLLEEALRG-RPQTLPGGVLARRKGGTLFLLPPRP 308

>TILS_THET2 (Q72IF6) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 507

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +3

Query: 354 KRRALRSEKAHGVSLQRERSLEEKLGEYVKKFQLETLAGGILCHVKTGRLFLAPDSP 524
           +RRALR      + L+ E  L   L E ++  + +TL GG+L   K G LFL P  P
Sbjct: 254 RRRALR-RLLEKLGLRPEARLVLLLEEALRG-RPQTLPGGVLARRKGGTLFLLPPRP 308

>PCX1_MOUSE (Q9QYC1) Pecanex-like protein 1 (Pecanex homolog) (Fragment)|
          Length = 1460

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 380  SAWGKLAKGAFVGGEAGGICQEISARNTGGGNSLP 484
            S W +L KG   G  +GG    I   +TGGG S P
Sbjct: 1147 STWHRLRKGCGAGCNSGG---NIEDSDTGGGTSCP 1178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,948,994
Number of Sequences: 219361
Number of extensions: 1282544
Number of successful extensions: 3901
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3897
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)