>DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 979

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 15/61 (24%), Positives = 30/61 (49%)
 Frame = +2

Query: 365 ESSKLPDKKPASSVVVSVLADPREAGDGDSDPRMTPKSLSRIFVVVLLDGVRYVTYSCTL 544
           +  ++P ++  S   +  + D  E+GD D  P+ +PK+++R F       V     +C +
Sbjct: 383 KDGEIPCRRMRSGSYIKAMGD-EESGDSDGSPKTSPKAVARRFTTRRSSSVDQARINCCV 441

Query: 545 P 547
           P
Sbjct: 442 P 442

>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 365 ESSKLPDKKPASSVVVSVLADPREAGDGDSDPRMTPKSLSRIFVVVLLDGVRYVTYSCTL 544
           +  ++P ++  S   +  + D  E+GD D  P+ +PK+L+R F       V     +C +
Sbjct: 381 KDGEIPCRRMRSGSYIKAMGD-EESGDSDGSPKTSPKALARRFASRRSSSVDTARINCCV 439

Query: 545 P 547
           P
Sbjct: 440 P 440

>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 365 ESSKLPDKKPASSVVVSVLADPREAGDGDSDPRMTPKSLSRIFVVVLLDGVRYVTYSCTL 544
           +  ++P ++  S   +  + D  E+GD D  P+ +PK+L+R F       V     +C +
Sbjct: 381 KDGEIPCRRMRSGSYIKAMGD-EESGDSDGSPKTSPKALARRFASRRSSSVDTARINCCV 439

Query: 545 P 547
           P
Sbjct: 440 P 440

>A37C_DROLE (O96570) Protein anon-37Cs|
          Length = 544

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +2

Query: 260 AYYGKLKNRRIMYNEAAIPLTGKTVNNTEPFNRTSESSKLPDKKPASSVVV 412
           ++ G    RR +YN  A+ + G++VNN+   N   +   L   K  + +VV
Sbjct: 14  SFSGYKLTRRNLYNAPALKVMGRSVNNSSSNNNDQQQYNLESAKQNTQIVV 64

>INCE_HUMAN (Q9NQS7) Inner centromere protein|
          Length = 923

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 335 NNTEPFNRTSESSKLPDKKPASSVVVSVLADPREAGDGDSD-PRMTPKSLSR 487
           NN+ P N T  ++  P+ KPA+S   +  A  +EA    +D PR  P+S  R
Sbjct: 398 NNSWPHNDTEIANSTPNPKPAASSPETPSAGQQEAKTDQADGPREPPQSARR 449

>PDE4C_DROME (Q9W4S9) cAMP-specific 3',5'-cyclic phosphodiesterase, isoforms N/G|
           (EC 3.1.4.17) (Learning/memory process protein) (Protein
           dunce)
          Length = 983

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
 Frame = +2

Query: 110 AGPILNSGMCSEVFQFDISTATNSGGXXXXXXXXXXXXXXATRKIPTPAPAYYGKLKNRR 289
           A  IL+S MCS++   D  ++T +                ++ +I             RR
Sbjct: 248 AASILSSSMCSDLMTSDRRSSTATEYSVKSVTTGNTSQRRSSGRI-------------RR 294

Query: 290 IMYNEAAIPLTGKTVNNTEPFNRTSESSKLPDKKPASSVVVSVLADPREAG--DGDSDPR 463
            +          +T  + +  N     S L    P++ +V+  L   RE+     DSD  
Sbjct: 295 YVSRMTIAGARRRTTGSFDVENGQGARSPLEGGSPSAGLVLQNLPQRRESFLYRSDSDFE 354

Query: 464 MTPKSLSR 487
           M+PKS+SR
Sbjct: 355 MSPKSMSR 362

>NALP4_HUMAN (Q96MN2) NACHT-, LRR- and PYD-containing protein 4|
           (PYRIN-containing APAF1-like protein 4) (PAAD and
           NACHT-containing protein 2) (PYRIN and NACHT-containing
           protein 2) (Ribonuclease inhibitor 2)
          Length = 994

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 25/94 (26%), Positives = 37/94 (39%)
 Frame = -1

Query: 350 KALCCSPFSQ*VESPPHCT*SSYSSACRNKQELVLESFE*H*HLRSSQLEKQVLCHQNWW 171
           + LC S  +   +   H + S YS  C +    VL +     HLR  Q++   L    + 
Sbjct: 600 RKLCFSVQNVFKKEDEHSSTSDYSLICWHHICSVLTTSG---HLRELQVQDSTLSESTFV 656

Query: 170 QWKCQTEIPRCTFQNLG*GLPFLHGTTVAMVHLL 69
            W  Q   P C  Q LG       G +V +  +L
Sbjct: 657 TWCNQLRHPSCRLQKLGINNVSFSGQSVLLFEVL 690

>DCW1_YEAST (P36091) Mannan endo-1,6-alpha-mannosidase DCW1 precursor (EC|
           3.2.1.101) (Endo-alpha-1->6-D-mannanase DCW1) (Defective
           cell wall 1)
          Length = 449

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
 Frame = -2

Query: 205 WRSRYYATRIGGS--GNVKLKYLAAHSRI*DRACHSFTEPLWQWSIYWGFLLVGSYYFQA 32
           W  + Y   +G +   N   KY+     I D  C   T   +QW+   G LL GS Y   
Sbjct: 209 WAEKVYEWMVGVNLISNGTYKYVYDGVSIDDN-CTKVTS--YQWTYNQGLLLAGSAYLYN 265

Query: 31  VTDDELW 11
            T  +LW
Sbjct: 266 FTGSDLW 272

>RPOB_HAEIN (P43738) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1343

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 219 EEFTAGEAGIMPPELVAVEMSN*NTSLH-IPEFRIGPAIPSRNHCGNGPST 70
           +E  AGEAGI    L+    SN NT ++ IP   +G  I       +GPST
Sbjct: 740 DETIAGEAGIDIYNLIKYTRSNQNTCINQIPCVNLGDPINRGEVLADGPST 790

>RPOB_HAEI8 (Q4QN33) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1343

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 219 EEFTAGEAGIMPPELVAVEMSN*NTSLH-IPEFRIGPAIPSRNHCGNGPST 70
           +E  AGEAGI    L+    SN NT ++ IP   +G  I       +GPST
Sbjct: 740 DETIAGEAGIDIYNLIKYTRSNQNTCINQIPCVNLGDPINRGEVLADGPST 790

>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump|
           5)
          Length = 948

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 15/68 (22%), Positives = 32/68 (47%)
 Frame = +2

Query: 269 GKLKNRRIMYNEAAIPLTGKTVNNTEPFNRTSESSKLPDKKPASSVVVSVLADPREAGDG 448
           G L   ++  ++  + +  K V     F   + +S++ ++    + +V +LADP+EA  G
Sbjct: 331 GTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAARASRIENQDAIDAAIVGMLADPKEARAG 390

Query: 449 DSDPRMTP 472
             +    P
Sbjct: 391 VREVHFFP 398

>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump|
           9)
          Length = 954

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 13/68 (19%), Positives = 35/68 (51%)
 Frame = +2

Query: 269 GKLKNRRIMYNEAAIPLTGKTVNNTEPFNRTSESSKLPDKKPASSVVVSVLADPREAGDG 448
           G L   ++  +++ + +  K ++  +     + +S++ ++    + +V +L DPREA +G
Sbjct: 337 GTLTLNKLTVDKSMVEVFVKDLDKDQLLVNAARASRVENQDAIDACIVGMLGDPREAREG 396

Query: 449 DSDPRMTP 472
            ++    P
Sbjct: 397 ITEVHFFP 404


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,366,667
Number of Sequences: 219361
Number of extensions: 1775959
Number of successful extensions: 4477
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4473
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)