Clone Information

BLAST Search Result

Clone Name	bags8m05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL3_ORYSA (P35684) 60S ribosomal protein L3	300	1e-81
2	RL3A_ARATH (P17094) 60S ribosomal protein L3	278	6e-75
3	RL3B_ARATH (P22738) 60S ribosomal protein L3	265	6e-71
4	RL3_RAT (P21531) 60S ribosomal protein L3 (L4)	223	2e-58
5	RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)	223	2e-58
6	RL3B_SCHPO (P36584) 60S ribosomal protein L3-B	223	2e-58
7	RL3A_SCHPO (P40372) 60S ribosomal protein L3-A	223	2e-58
8	RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi...	221	8e-58
9	RL3_BOVIN (P39872) 60S ribosomal protein L3	219	3e-57
10	RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3	219	5e-57
11	RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)	214	1e-55
12	RL3_DICDI (P34113) 60S ribosomal protein L3	213	3e-55
13	RL3_NEUCR (P59671) 60S ribosomal protein L3	213	4e-55
14	RL3_DROME (O16797) 60S ribosomal protein L3	208	7e-54
15	RL3_TOXCA (P49149) 60S ribosomal protein L3	206	4e-53
16	RL3_CAEEL (P50880) 60S ribosomal protein L3	206	5e-53
17	RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3	205	6e-53
18	RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3	204	1e-52
19	RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3	204	1e-52
20	RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten...	202	5e-52
21	RL3_KLULA (Q6CJR7) 60S ribosomal protein L3	201	2e-51
22	RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like	193	2e-49
23	RL3_ASHGO (Q759R7) 60S ribosomal protein L3	192	4e-49
24	RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like	192	4e-49
25	RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3	96	9e-21
26	RL3_METTH (O26110) 50S ribosomal protein L3P	68	2e-11
27	RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P	64	2e-10
28	RL3_METVA (Q9UWG2) 50S ribosomal protein L3P	61	2e-09
29	RL3_METKA (Q8TY90) 50S ribosomal protein L3P	54	4e-07
30	RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)	54	4e-07
31	RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P	53	5e-07
32	RL3_METJA (P54014) 50S ribosomal protein L3P	52	9e-07
33	RL3_ARCFU (O28354) 50S ribosomal protein L3P	52	1e-06
34	RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P	51	3e-06
35	RL3_METAC (Q8TRU7) 50S ribosomal protein L3P	48	2e-05
36	RL3_SULTO (Q975I1) 50S ribosomal protein L3P	47	5e-05
37	RL3_SULAC (Q4JB40) 50S ribosomal protein L3P	47	5e-05
38	RL3_METMA (Q8PV50) 50S ribosomal protein L3P	45	1e-04
39	RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P	45	2e-04
40	RL3_PYRHO (O59418) 50S ribosomal protein L3P	42	0.001
41	RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P	41	0.003
42	RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P	40	0.003
43	RL3_NANEQ (P60458) 50S ribosomal protein L3P	40	0.006
44	RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P	40	0.006
45	ZN674_HUMAN (Q2M3X9) Zinc finger protein 674	30	4.6
46	GPR61_HUMAN (Q9BZJ8) Probable G-protein coupled receptor 61 (Bio...	30	6.0
47	GPR61_MOUSE (Q8C010) Probable G-protein coupled receptor 61	30	6.0
48	DNAJ_CLOTE (Q892R1) Chaperone protein dnaJ	30	6.0
49	Y027_MYCGE (P47273) Hypothetical protein MG027	30	6.0
50	MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)	29	7.8
51	ACPS_BUCAI (P57344) Holo-[acyl-carrier-protein] synthase (EC 2.7...	29	7.8
52	EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-...	29	7.8

>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score =  300 bits (769), Expect = 1e-81
 Identities = 147/171 (85%), Positives = 155/171 (90%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR SRHRGKVK+F +DD SK CHLT+F+GYKAGMTHIVREVEKPGSKLHKKETC
Sbjct: 13  LGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKETC 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            GLVAYVKTPRGLR+LNSVWAQHLSE+VRRRFYKNWCKSKKKAFTKY
Sbjct: 73  EAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           ALKYDSDAGKKEIQMQLEKMKKYA++VRVIAHTQIRKMKGLKQKKAHLMEI
Sbjct: 133 ALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEI 183



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 8   SHRKFEHPXHGIPRFPPQEALLAPPRKGEGFPQ 106
           SHRKFEHP HG   F P++       K + FP+
Sbjct: 1   SHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPK 33

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>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score =  278 bits (712), Expect = 6e-75
 Identities = 135/171 (78%), Positives = 148/171 (86%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR +RHRGKVKAF +DDQ+K C  TAF+GYKAGMTHIVREVEKPGSKLHKKETC
Sbjct: 13  LGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREVEKPGSKLHKKETC 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+VAYVKTPRGLR+LN+VWAQHLSE+VRRRFYKNW KSKKKAFT Y
Sbjct: 73  EAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWAKSKKKAFTGY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           A +YDS+ GKK IQ QLEKMKKYATV+RV+AHTQIRKMKGLKQKKAH+MEI
Sbjct: 133 AKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEI 183



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 8   SHRKFEHPXHGIPRFPPQEALLAPPRKGEGFPQ 106
           SHRKFEHP HG   F P++       K + FP+
Sbjct: 1   SHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPK 33

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>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score =  265 bits (677), Expect = 6e-71
 Identities = 127/171 (74%), Positives = 146/171 (85%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR SRHRGKVKAF +DD +K C LT+FLGYKAGMTHIVR+VEKPGSKLHKKETC
Sbjct: 13  LGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDVEKPGSKLHKKETC 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YVKTPRGLR+L +VWAQHLSE++RRRFYKNW KSKKKAFT+Y
Sbjct: 73  EAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKNWAKSKKKAFTRY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           + K++++ GKK+IQ QLEKMKKY +V+RV+AHTQIRKMKGLKQKKAHL EI
Sbjct: 133 SKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEI 183



 Score = 32.7 bits (73), Expect = 0.71
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 8   SHRKFEHPXHGIPRFPPQEALLAPPRKGEGFPQR*P 115
           SHRKFEHP HG   F P++       K + FP+  P
Sbjct: 1   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP 36

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>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score =  223 bits (569), Expect = 2e-58
 Identities = 108/171 (63%), Positives = 132/171 (77%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR SRHRGKVK+F +DD SK  HLTAFLGYKAGMTHIVREV++PGSK++KKE  
Sbjct: 13  LGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLRT  +V+A+H+S++ +RRFYKNW KSKKKAFTKY
Sbjct: 73  EAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
             K+  D GKK+++     MKKY  V+R+IAHTQ+R +  L+QKKAHLMEI
Sbjct: 133 CKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEI 182

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>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score =  223 bits (569), Expect = 2e-58
 Identities = 108/171 (63%), Positives = 132/171 (77%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR SRHRGKVK+F +DD SK  HLTAFLGYKAGMTHIVREV++PGSK++KKE  
Sbjct: 13  LGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLRT  +V+A+H+S++ +RRFYKNW KSKKKAFTKY
Sbjct: 73  EAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
             K+  D GKK+++     MKKY  V+R+IAHTQ+R +  L+QKKAHLMEI
Sbjct: 133 CKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEI 182

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>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score =  223 bits (569), Expect = 2e-58
 Identities = 113/171 (66%), Positives = 133/171 (77%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR SR RGKVKAF +DD SK  HLTAFLGYKAGMTHIVR++++PGSK+HK+E  
Sbjct: 13  LGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREIL 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLR+L +VWA+HLSE+V+RRFYKNW KSKKKAFTKY
Sbjct: 73  EAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNWFKSKKKAFTKY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           A KY      + I  +LE++KKY +VVRV+AHTQIRK   L QKKAHLMEI
Sbjct: 133 AKKYAEST--QSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEI 180

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>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score =  223 bits (569), Expect = 2e-58
 Identities = 113/171 (66%), Positives = 133/171 (77%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR SR RGKVKAF +DD SK  HLTAFLGYKAGMTHIVR++++PGSK+HK+E  
Sbjct: 13  LGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREIL 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLR+L +VWA+HLSE+V+RRFYKNW KSKKKAFTKY
Sbjct: 73  EAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNWFKSKKKAFTKY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           A KY      + I  +LE++KKY +VVRV+AHTQIRK   L QKKAHLMEI
Sbjct: 133 AKKYAEST--QSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAHLMEI 180

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>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score =  221 bits (564), Expect = 8e-58
 Identities = 108/171 (63%), Positives = 132/171 (77%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR SRHRGKVK+F +DD SK  HLTAFLGYKAGMTHIVREV++PGSK++KKE  
Sbjct: 13  LGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLRT  +V+A+H+S++ +RRFYKNW KSKKKAFTKY
Sbjct: 73  EAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
             K+  + GKK+++     MKKY  V+RVIAHTQ+R +  L+QKKAHLMEI
Sbjct: 133 CKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEI 182

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>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score =  219 bits (559), Expect = 3e-57
 Identities = 106/171 (61%), Positives = 131/171 (76%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR SRHRGKVK+F +DD SK  HLTAFLGYKAGMTHIVREV++PGSK++KKE  
Sbjct: 13  LGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLRT  +++A+H+S++ +RRFYKNW KSKKKAFTKY
Sbjct: 73  EAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
             K+    GKK+++     MKKY  V+RVIAHTQ+R +  L+QKKAHLME+
Sbjct: 133 CKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEV 182

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>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score =  219 bits (557), Expect = 5e-57
 Identities = 107/171 (62%), Positives = 131/171 (76%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR SRHRGKVK+F +DD SK  HLTAFLGYKAGMTHIVREV++PGSK++KKE  
Sbjct: 13  LGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
            A            G+V YV+TPRGLRT  +V+A+H+S++ +RRFYKNW KSKKKAFTKY
Sbjct: 73  VAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
             K+  + GKK+++     MKKY  V+RVIAHTQ+R +  L+QKKAHLMEI
Sbjct: 133 CKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEI 182

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>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score =  214 bits (546), Expect = 1e-55
 Identities = 106/171 (61%), Positives = 132/171 (77%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L FLPRKR +RHRGKVK+F +DD  K  HLTA +GYKAGMT +VR++++PG+K+HKKE  
Sbjct: 14  LAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKEIV 73

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V Y++TPRGLR+L +VWA+HLS++V+RRFYKNW KSKKKAFTKY
Sbjct: 74  EAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKY 133

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           A K+  + G   I  +LE++KKY TVVRV+AHTQIRK   LKQKKAHLMEI
Sbjct: 134 AKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEI 182



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 5   MSHRKFEHPXHGIPRFPPQEALLAPPRKGEGFPQR*P 115
           MSHRK+E P HG   F P++       K + FP+  P
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDP 37

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>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score =  213 bits (542), Expect = 3e-55
 Identities = 104/172 (60%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGF PRKR +RH+GKVK+F +DD+++K HLTAF+GYKAGMTH+VR++EKPGSK+HKKE  
Sbjct: 13  LGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLEKPGSKMHKKEIV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSK-KKAFTK 401
           EA            GLV YV+T +GL+T  +VWAQHLS++ RRR YKNW KSK KKAFTK
Sbjct: 73  EAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKNWYKSKSKKAFTK 132

Query: 402 YALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           Y  +Y+++ GKK I+  L+ +KK  +VVRVIAHTQ+ K+K L QKKAH++EI
Sbjct: 133 YVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKAHVLEI 183



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 8   SHRKFEHPXHGIPRFPPQEALLAPPRKGEGFPQ 106
           SHRKFE P HG   F P++       K + FP+
Sbjct: 1   SHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPK 33

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>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score =  213 bits (541), Expect = 4e-55
 Identities = 107/171 (62%), Positives = 130/171 (76%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L +LPRKR +RHRGKVK+F +DD  K  HLTA +GYKAGMT IVR++++PG+K HKKE  
Sbjct: 14  LAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKAHKKEVV 73

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            GLV Y++TPRGLR+L +VWA+HLS++V+RRFYKNW KSKKKAFTKY
Sbjct: 74  EAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKY 133

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
             K+ SD     I  +LE++KKY TVVRV+AHTQIRK   LKQKKAHLMEI
Sbjct: 134 VKKH-SDNNGAAITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEI 182

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>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score =  208 bits (530), Expect = 7e-54
 Identities = 103/171 (60%), Positives = 125/171 (73%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           + F P+KR +RHRGKVKAF +DD SK  HLT F+GYKAGMTHIVRE ++PGSK++KKE  
Sbjct: 13  MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G V Y++TP GLR L +VWAQHLSE+ RRRFYKNW KSKKKAFTK 
Sbjct: 73  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           + K+  D GKK I+    KM +Y  V+RVIAH+QIR +K  +QKKAH+MEI
Sbjct: 133 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAHVMEI 182

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>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score =  206 bits (524), Expect = 4e-53
 Identities = 100/171 (58%), Positives = 125/171 (73%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           +GF P+KR  RHRGKVKAF +DD +K  HLTAF+ +KAGMTHIVREV+KPGSK++KKE  
Sbjct: 13  MGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREVDKPGSKVNKKEVV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V Y+ TPRG R   +VWA+HLSED R RFYKNW  SKKKAF K+
Sbjct: 73  EAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYKNWHTSKKKAFQKH 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           A K+  + G+K I+  L KMKKY + +RVIAHTQ++ MK  ++KKAH+MEI
Sbjct: 133 AKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKH-REKKAHIMEI 182

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>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score =  206 bits (523), Expect = 5e-53
 Identities = 98/171 (57%), Positives = 127/171 (74%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           +GF P+KR   +RG++KAF +DD+SK  HLTAFLGYKAGMTHIVR+V+KPGSK++KKE  
Sbjct: 14  MGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVV 73

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+  YV TP+G R L ++WA+HLSE+ RRRFY NW KSKKKAFTKY
Sbjct: 74  EAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKY 133

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           A K+  + GKK I+    K+KKY + +RVIAHTQ++ ++  +QKKAHL+EI
Sbjct: 134 AKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEI 183

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>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score =  205 bits (522), Expect = 6e-53
 Identities = 103/171 (60%), Positives = 131/171 (76%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR +  RG+VK+F +D +SK   LTAFLGYKAGMT +VR++++PGSK+HK+E  
Sbjct: 14  LGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDLDRPGSKMHKREIV 73

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLR+L +VWA+HLSE+VRRRFYKNW KSKKKAFTKY
Sbjct: 74  EAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYKNWYKSKKKAFTKY 133

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           + KY  D    +++ +L ++KKYA+VVRV+AHTQI+K   L QKKAHL EI
Sbjct: 134 SAKYAQDGA--QVERELARIKKYASVVRVLAHTQIKKTP-LAQKKAHLAEI 181

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>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score =  204 bits (520), Expect = 1e-52
 Identities = 97/171 (56%), Positives = 126/171 (73%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           +GF P+KR   +RG++KAF +DD SK  HLTAFLGYKAGMTHIVR+V+KPGSK++KKE  
Sbjct: 14  MGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVV 73

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+  Y+ TP+G R L ++WA+HLSE+ RRRFY NW KSKKKAFTKY
Sbjct: 74  EAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKY 133

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           A K+  + GKK I+    K+KKY + +RVIAHTQ++ ++  +QKKAHL+EI
Sbjct: 134 AKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEI 183

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>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score =  204 bits (520), Expect = 1e-52
 Identities = 103/171 (60%), Positives = 130/171 (76%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR +  RG+VK+F +DD+SK   LT+FLGYKAGMT IVR++++PGSK HK+E  
Sbjct: 14  LGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIV 73

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLR+L +VWA+HLS++V+RRFYKNW KSKKKAFTKY
Sbjct: 74  EAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKY 133

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           + KY  +    EI+ +L ++KKYATVVRV+ HTQ+RK   L QKKAHL EI
Sbjct: 134 SAKYAQNGA--EIERELARIKKYATVVRVLVHTQVRKTP-LVQKKAHLAEI 181

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>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score =  202 bits (514), Expect = 5e-52
 Identities = 103/171 (60%), Positives = 128/171 (74%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR +  R +VKAF +DD+SK   LT+FLGYKAGMT IVR++++PGSK HK+E  
Sbjct: 13  LGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREVV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLR+L +VWA+HLS++V+RRFYKNW KSKKKAFTKY
Sbjct: 73  EAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKY 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           + KY  D     I+ +L ++KKYA+VVRV+ HTQIRK   L QKKAHL EI
Sbjct: 133 SAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHLAEI 180

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>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score =  201 bits (510), Expect = 2e-51
 Identities = 99/171 (57%), Positives = 129/171 (75%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR +  RG+VK+F +DDQ+K   LT+FLGYKAGM+ IVR++++PGSK HK+E  
Sbjct: 14  LGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDLDRPGSKFHKREVV 73

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV+TPRGLR+L +VWA+HLS++V+RRFYKNW KSKKKAFTKY
Sbjct: 74  EAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKY 133

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           + KY  +    ++  +L ++KKYA+VVRV+ HTQ+RK   L QKKAHL EI
Sbjct: 134 SAKYAENGA--QVDRELARIKKYASVVRVLVHTQVRKTP-LSQKKAHLAEI 181

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>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score =  193 bits (491), Expect = 2e-49
 Identities = 96/171 (56%), Positives = 120/171 (70%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLP KR  RHRGKVK + RDD S+  HLTAFLGYKAGMTH +REV +PG K+ K+E  
Sbjct: 13  LGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGLKISKREEV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV TPRGLR+  +++A+HLS++ RRRFYK+W KSKKKAFTK 
Sbjct: 73  EAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHKSKKKAFTKA 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
             ++    GKK++Q     MKKY  V+RVI HTQ+ K+   +QKKAH+MEI
Sbjct: 133 CKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEI 182

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>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score =  192 bits (489), Expect = 4e-49
 Identities = 98/171 (57%), Positives = 127/171 (74%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLPRKR +  RG+VKAF +DD+SK   LT+FLGYKAGMT IVR++++PGSK HK+E  
Sbjct: 14  LGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIV 73

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V Y++TPRGLR+L +VWA+HLS++++RRFYKNW KSKKKAFT+ 
Sbjct: 74  EAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTQV 133

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
                +  G   I+ +L ++KKYA+VVRV+AHTQ+RK   L QKKAHL EI
Sbjct: 134 PPPSTAQDG-AAIERELARIKKYASVVRVLAHTQVRKTP-LVQKKAHLAEI 182

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>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score =  192 bits (489), Expect = 4e-49
 Identities = 95/171 (55%), Positives = 120/171 (70%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGFLP KR  RHRGKVK + RDD S+  HLTAFLGYKAGMTH +REV +PG K+ K+E  
Sbjct: 13  LGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGLKISKREEV 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
           EA            G+V YV TPRGLR+  +++A+HLS++ RRRFYK+W KSKKKAFTK 
Sbjct: 73  EAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHKSKKKAFTKA 132

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
             ++    GKK++Q     MKKY  V+RVI HTQ+ K+   +QKKAH+ME+
Sbjct: 133 CKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEV 182

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>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score = 96.3 bits (238), Expect(2) = 9e-21
 Identities = 66/174 (37%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVR-EVEKPGSKLHKKET 221
           L F PRKR    R    AF  DD+S+  HLT F+ YKAGMTH+VR + +   +K   +E 
Sbjct: 14  LQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTKTQVAKNKQLSREI 73

Query: 222 CEAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKA--F 395
            +A            G+V Y KT  GLR L  V A ++S+ V RR + N   SK+ A  F
Sbjct: 74  MDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMFGNRYASKESAGQF 133

Query: 396 TKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
            K ++           + ++E +K+ A  VRV+  TQ   +KGL  KKAH+ EI
Sbjct: 134 CKGSV----------CESRVEMIKERAHCVRVLVQTQPTLIKGLGLKKAHIAEI 177



 Score = 23.1 bits (48), Expect(2) = 9e-21
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 5  MSHRKFEHPXHGIPRFPPQE 64
          MS RKF  P HG  +F P++
Sbjct: 1  MSCRKFNAPRHGSLQFCPRK 20

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>RL3_METTH (O26110) 50S ribosomal protein L3P|
          Length = 337

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 52/170 (30%), Positives = 76/170 (44%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           + F PRKR +R   +VK++ + D+     L A  GYKAGMTH++    +  S     E  
Sbjct: 12  VAFSPRKRAARETPRVKSWPQVDEPG---LLALAGYKAGMTHVMMVDNQKNSPTEGMEVS 68

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
                          +  Y KT RGL+TL  V A    +D+RR+             T  
Sbjct: 69  TPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRK------------LTPP 116

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLME 554
           A  YD +A  ++I+  +E    Y   VRVI HT  R +  + +KK  + E
Sbjct: 117 ADDYDQEAAIEKIRSNME----YVADVRVIVHTNPR-LASVPKKKPEVFE 161

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>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGF PRKR SR   +VK +   D  K   L AFLGY+AGMTH+    ++PG     KE  
Sbjct: 14  LGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVDDRPGRPTSGKEIF 72

Query: 225 EAXXXXXXXXXXXXGLVAYVKTP-RGLRTLNSVWAQHLSE-DVRRRFYKNWCKSKKKAFT 398
                          +  Y   P RG  +L   WAQ   E +++RR              
Sbjct: 73  VPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI------------- 119

Query: 399 KYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
                +D+D   K ++ +L+K    A  VR+IA +Q +   GL +KK  L+EI
Sbjct: 120 STLGSFDTDKMLKSLEERLDK----AEDVRLIAASQPKLAGGLSKKKPDLLEI 168

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>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P|
          Length = 334

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L F PRKR  +   K++++  D   KK  L AF  YKAG TH +     P S  + +E  
Sbjct: 13  LAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPKSPNNGQEVF 69

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
                         G+ AY KT +GL+ L  VWA+   +++ R          K   TK 
Sbjct: 70  SPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGR----------KLTVTK- 118

Query: 405 ALKYDSDAGKKEIQM--QLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
                    K+EI+    L+ + +    +RVI HT   K  G+ +KK  ++EI
Sbjct: 119 ---------KEEIKTVESLDAVLEKTVDLRVIVHTN-PKTTGIPKKKPEVVEI 161

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>RL3_METKA (Q8TY90) 50S ribosomal protein L3P|
          Length = 361

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L F PRKR SR   +++++  +++ +   +  F GYKAGMTH +   + P S    +E  
Sbjct: 17  LAFSPRKRASRPVPRIRSWPDEERVR---VQGFAGYKAGMTHAIMIDDWPNSPTEGEEIS 73

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
                          + AY  TP G R +   WA+ + E++             + FT  
Sbjct: 74  VPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAE-IPEEL----------EMDRVFT-- 120

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATV--VRVIAHTQIRKMKGLKQKKAHLME 554
            +  D +AG  +   ++E++     V  +RVI  TQ +K  G+ +KK  +ME
Sbjct: 121 -VPKDGEAGDLD---KIEELVDEGIVEEIRVIVATQPKK-AGVPKKKPDVME 167

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>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)|
          Length = 337

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 46/170 (27%), Positives = 67/170 (39%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           LGF PRKR +    +  ++  DD      +  F GYKAGMTH+V   ++P S     E  
Sbjct: 11  LGFGPRKRSTSETPRFNSWPSDDGQPG--VQGFAGYKAGMTHVVLVNDEPNSPREGMEET 68

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
                          L AY  TP G R L  VW      ++ R                 
Sbjct: 69  VPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL-------------DV 115

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLME 554
              +D DA +++I+   E        +R+I HT    +  + +KK  +ME
Sbjct: 116 PEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVME 163

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>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P|
          Length = 334

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 44/170 (25%), Positives = 65/170 (38%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           +GF PRKR      +  ++  DD   +  L  F GYKAGMTH+V   +K  +     ET 
Sbjct: 11  MGFSPRKRAESEVPRFNSWPADDG--EVGLQGFAGYKAGMTHVVLVDDKANAPTEGMETT 68

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
                          +  Y  TP G + L  VWA    E + R                 
Sbjct: 69  VPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR----------------- 111

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLME 554
            L    + G  +  ++    ++ A  +RVI HT      G+ +K   +ME
Sbjct: 112 TLSVPDEGGDTDELIEALDTEEIAD-IRVITHTVPGDTAGVPKKNPDVME 160

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>RL3_METJA (P54014) 50S ribosomal protein L3P|
          Length = 335

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L F PRKR  R   +++++  +D  +   L AF  YKAGM+H   + + P S    +E  
Sbjct: 13  LAFSPRKRAKRPVPRIRSWPEEDTVR---LQAFPVYKAGMSHAFIKEDNPKSPNAGQEVF 69

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTK 401
                          +  Y +  R  L TL  VWA +L +++ R+               
Sbjct: 70  TPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERK--------------- 114

Query: 402 YALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
             +K      +K ++  LE +K     VRV+ HT   K+  L +KK  ++EI
Sbjct: 115 --IKLPKKEDRKTVE-DLEALKDKIEDVRVLVHTN-PKLTCLPKKKPEILEI 162

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>RL3_ARCFU (O28354) 50S ribosomal protein L3P|
          Length = 331

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 2/172 (1%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L F PRKR      +++A+   D+ +   +  F GYKAGMTH+V   ++  S  + +E  
Sbjct: 11  LAFSPRKRAKSIVPRIRAWPECDRVR---MQGFAGYKAGMTHVVMIDDRKNSPTYGEEVV 67

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
                          +  Y KT  G++    VW+ +L + + RR                
Sbjct: 68  VPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRRL--------------- 112

Query: 405 ALKYDSDAGKKEIQMQLEK--MKKYATVVRVIAHTQIRKMKGLKQKKAHLME 554
                 +  KKE  ++  K  ++  A+ VRV+ +TQ   + G+ +K   +ME
Sbjct: 113 ------NLPKKEPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDVME 158

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>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P|
          Length = 346

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L + PRKR      +++++ +D + +   +  F GYKAGMTHI+   + PG     KE  
Sbjct: 12  LAYSPRKRAKSIVPRIRSWPKDSEVR---MLGFAGYKAGMTHILMIDDSPG-LTKGKEIF 67

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
                         G+ AY +   GL T   VW   L ++V RR          K   K 
Sbjct: 68  VPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARRI---------KTLPK- 117

Query: 405 ALKYDSDAGKKEIQMQLEKMKKYATV--VRVIAHTQIRKMKGLKQKKAHLME 554
              Y+ +A + ++  QLE +     +  VR++ HTQ   + GLK KK  +ME
Sbjct: 118 --NYNEEAFQAKLG-QLEDLVNDGEIADVRLLVHTQ-PWLIGLK-KKPEVME 164

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>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P|
          Length = 337

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 29/104 (27%), Positives = 43/104 (41%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L F PRKR   H  + +A+       K  L +F GYK GMTH++   +   S     E  
Sbjct: 12  LAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDTKNSLTQGMEIS 69

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRR 356
                          + AY +   G + +  VWA  L  +++RR
Sbjct: 70  VPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRR 113

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>RL3_SULTO (Q975I1) 50S ribosomal protein L3P|
          Length = 343

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 44/170 (25%), Positives = 76/170 (44%)
 Frame = +3

Query: 48  GFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCE 227
           G  PRKR S      +++    QS +  L  F+GYK GM+HI    +KP S  + KE   
Sbjct: 15  GVRPRKRASEILPTPRSWPTI-QSNEPKLLGFVGYKVGMSHIFMIDDKPTSPNYGKEIYV 73

Query: 228 AXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKYA 407
                         + AYV  P+G  T  + +   +SED+ +         +++  T+  
Sbjct: 74  PVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLI-------QQRKVTR-- 124

Query: 408 LKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           LK D +  K ++  ++         +RV+  TQ + +  L +KK  ++E+
Sbjct: 125 LKIDKEKMKGKLD-EINNKLNDILYLRVLIATQPKLVPSLGKKKPEIVEV 173

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>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P|
          Length = 342

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
 Frame = +3

Query: 120 KKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAXXXXXXXXXXXXGLVAYVKTPRG 299
           K+  L  F+GYKAGMTH+    +KP S  + KE                 L AY    +G
Sbjct: 38  KEPKLLGFIGYKAGMTHVYMIDDKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKG 97

Query: 300 -LRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYA 476
            L  L   WA          F +   K  K+  T  +LK DS   K+++ + ++K     
Sbjct: 98  ELSVLVDYWA---------NFEEGSLKYLKRKIT--SLKVDSSKMKEKLDL-IQKNLNNI 145

Query: 477 TVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           T +R++  TQ   +  L +K+  ++EI
Sbjct: 146 TYMRLLVSTQPWLVPSLGKKRPEIVEI 172

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>RL3_METMA (Q8PV50) 50S ribosomal protein L3P|
          Length = 337

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 28/104 (26%), Positives = 42/104 (40%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L F PRKR   H  + +A+       K  L +F GYK GMTH++   +   S     E  
Sbjct: 12  LAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDIKNSLTQGMEIS 69

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRR 356
                          + AY +   G + +   WA  L  +++RR
Sbjct: 70  VPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRR 113

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>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P|
          Length = 338

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 46/173 (26%), Positives = 68/173 (39%), Gaps = 2/173 (1%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           +G  PRKR +    +V+ +   +  K   L  F  YKAGM H V   ++P S L+ KE  
Sbjct: 13  MGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPTSPLYGKEVV 71

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRG--LRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFT 398
           +A            G   Y   P     R +  VWA  L + + R               
Sbjct: 72  KAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPKFLHR-------------VL 118

Query: 399 KYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
               K D D   K++    E+ +  A  VR +  TQ   + G+ +K   L+EI
Sbjct: 119 TLPEKLDVDKQLKKV----EEFRDVAVDVRALVATQ-PHLSGIGKKTPELLEI 166

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>RL3_PYRHO (O59418) 50S ribosomal protein L3P|
          Length = 362

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 9/179 (5%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L F PRKR      +++++ ++ + +   +  F GYKAGMTHI+   ++PG   + KE  
Sbjct: 12  LAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG-LTNGKEIF 67

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKY 404
                         G+ AY +   GL T   V    +  D     Y    K K + FT Y
Sbjct: 68  MPVTIIETPPLRVFGIRAYRQGYLGLETAGEV----IVPDFELDNYTPSKKGKGRKFTFY 123

Query: 405 AL------KYDSDAGKKEIQMQ---LEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLME 554
                       D  ++E + +   LE M K   +V V A    +      +KK  +ME
Sbjct: 124 QFLGRRIATLPKDYTQEEFEQKLGALEDMIKEGEIVEVRALVSTQPWVIKLKKKPEVME 182

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>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P|
          Length = 361

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 12/182 (6%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           L F PRKR      +++++ ++ + +   +  F GYKAGMTHI+   ++PG   + KE  
Sbjct: 12  LAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG-LTNGKEIF 67

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWC--KSKKKAFT 398
                         G+ AY +   GL T   V       D       N+   K+K + FT
Sbjct: 68  MPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELD-------NYVSKKAKGRKFT 120

Query: 399 KYAL----------KYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHL 548
            Y L           Y  D  ++++   LE M K   +V V A    +      +KK  +
Sbjct: 121 FYQLLKRRIATLPKNYTKDDFEQKLG-NLEDMIKEGEIVEVRALVATQPWVIKLKKKPEV 179

Query: 549 ME 554
           ME
Sbjct: 180 ME 181

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>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P|
          Length = 351

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 8/178 (4%)
 Frame = +3

Query: 48  GFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCE 227
           G  PRKR S      + + + + S+   L  F+GYK GMTH+    + P S  + KE   
Sbjct: 15  GLRPRKRSSELLPTPRTWPQIN-SQNPKLLGFVGYKVGMTHVFMIDDWPNSPTNGKEIYM 73

Query: 228 AXXXXXXXXXXXXGLVAYVKTPRG-LRTLNSVWAQHLSE--DVRRRFY--KNWCK---SK 383
                         L AY    +G    +   W+    +  D+ RR +   ++ K   SK
Sbjct: 74  PVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRRIHSISSFLKDDESK 133

Query: 384 KKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAHLMEI 557
           KK   ++  K D       I+  L+++  +    R++  TQ RK+  L +K   L+EI
Sbjct: 134 KKFDERFNTKLDL------IKSNLDRIVYF----RLLVSTQPRKIPSLGKKAPDLVEI 181

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>RL3_NANEQ (P60458) 50S ribosomal protein L3P|
          Length = 321

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETC 224
           +GF PRKR SR   ++K + + ++ K     AF  YK GMTH +  +   G ++    T 
Sbjct: 14  MGFWPRKRASRIYPRIKTWPKIEEIKP---LAFAAYKVGMTHTILNIN--GERVFTPVT- 67

Query: 225 EAXXXXXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRF--YKNWCKSKKK 389
                         G  AY K    L+ ++S++   L + V R+    KN+   +KK
Sbjct: 68  ----VLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPKLKNYNFEEKK 120

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>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P|
          Length = 365

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = +3

Query: 45  LGFLPRKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPG 197
           LGF PRKR      +++++ ++ + +   +  F GYKAGMTHI+   ++PG
Sbjct: 12  LGFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59

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>ZN674_HUMAN (Q2M3X9) Zinc finger protein 674|
          Length = 581

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 117 IGHLCGKPSP-FRGGASNASWGGNRGXPCXGCS 22
           +GHL GKP   FR G  + SW  + G P   C+
Sbjct: 47  VGHLVGKPDVIFRLGPGDESWMADGGTPVRTCA 79

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>GPR61_HUMAN (Q9BZJ8) Probable G-protein coupled receptor 61 (Biogenic amine|
           receptor-like G-protein coupled receptor)
          Length = 451

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 165 SCQPCSQGRQ*GGISWIGHLCGKPSPFRGGASN 67
           S QP S G+    ++WIG+ C   +PF  G  N
Sbjct: 313 SAQPISTGQVESVVTWIGYFCFTSNPFFYGCLN 345

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>GPR61_MOUSE (Q8C010) Probable G-protein coupled receptor 61|
          Length = 449

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 165 SCQPCSQGRQ*GGISWIGHLCGKPSPFRGGASN 67
           S QP S G+    ++WIG+ C   +PF  G  N
Sbjct: 313 SAQPISAGQVENVVTWIGYFCFTSNPFFYGCLN 345

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>DNAJ_CLOTE (Q892R1) Chaperone protein dnaJ|
          Length = 375

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +3

Query: 384 KKAFTKYALKY--DSDAGKKEIQMQLEKMKKYATVVRVIAHTQIR 512
           KKAF K ALKY  D +AG KE +   E+ K+     +V++  Q R
Sbjct: 22  KKAFRKLALKYHPDKNAGNKEAE---ERFKEINEAYQVLSDPQKR 63

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>Y027_MYCGE (P47273) Hypothetical protein MG027|
          Length = 151

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = +3

Query: 318 VWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATV--VRV 491
           + A  L  D + R    W K   KAF++    +     +++++ QLE   KY  +   ++
Sbjct: 39  IQADFLEYDTKERQLNEWQKLIVKAFSENIFSFQKKIEEQQLKNQLEIQTKYNKISGKKI 98

Query: 492 IAHTQIRKMKGLKQKKAH 545
              T    +  L ++KAH
Sbjct: 99  DLLTTAVVLCALSEQKAH 116

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>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 37/159 (23%), Positives = 60/159 (37%)
 Frame = +3

Query: 60   RKRCSRHRGKVKAFRRDDQSKKCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAXXX 239
            +K+C +   K K   +  + KKC   A    +A       E  K   +L +K+ CE    
Sbjct: 858  KKKCEKAAKKRK---QAAEKKKCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCEEAAK 914

Query: 240  XXXXXXXXXGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYD 419
                       VA  K    L       A+ + +   ++  K   K +KKA  K  LK  
Sbjct: 915  KEKE-------VAERKKCEEL-------AKKIKKAAEKKKCKKLAKKEKKAGEKNKLKKK 960

Query: 420  SDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQK 536
            +  GKK+ +   +K K+ A   +     +  K    K+K
Sbjct: 961  AGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKK 999

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>ACPS_BUCAI (P57344) Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7)|
           (Holo-ACP synthase) (4'-phosphopantetheinyl transferase
           acpS)
          Length = 126

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 357 FYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVI 494
           FYKN     K  F K+ALK   +   K I + +   K YA  + ++
Sbjct: 79  FYKNKSGKPKLRFLKHALKKSKEIQCKSIHVSISDQKLYAYALVIL 124

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>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)|
           (Expansin S2) (Ath-ExpAlpha-1.24)
          Length = 252

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
 Frame = -3

Query: 117 IGHLCGKPSPFRGG--ASNASWGGN---RGXPCXGCSNLRCD 7
           +G  CG  +P+  G  A  A+  G     G  C GC  +RCD
Sbjct: 44  LGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCD 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,660,503
Number of Sequences: 219361
Number of extensions: 1176956
Number of successful extensions: 4177
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 3949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4132
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result