ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8l20 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 314 bits (804), Expect = 1e-85 Identities = 165/181 (91%), Positives = 167/181 (92%) Frame = +1 Query: 1 LLYRXLPVPXHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASN 180 LLYR HKFTLTTYTANG AITATSTKKADL +GEIQSQIKNKNITVDVKANSASN Sbjct: 17 LLYRDYQTD-HKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASN 75 Query: 181 VITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAF 360 VITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLS AF Sbjct: 76 VITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAF 135 Query: 361 GTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVEKSST 540 GTSALAVG DVSLDT+TKNF KYNAA SYTNQDLIASLNLNNKGDSLTASYYH VEKS T Sbjct: 136 GTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEKSGT 195 Query: 541 A 543 A Sbjct: 196 A 196
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 273 bits (699), Expect = 2e-73 Identities = 142/181 (78%), Positives = 156/181 (86%) Frame = +1 Query: 1 LLYRXLPVPXHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASN 180 LLYR HKFTLTTYT+NG AITATSTKKADLI GEIQSQIKNKNITVDVKANS SN Sbjct: 16 LLYRDYQTD-HKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSN 74 Query: 181 VITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAF 360 V+TT+T D+L PGLK+ILSFAVPDQ+SGK ELQY HDYAG++ASIGLTA+PVVNLS+ F Sbjct: 75 VVTTVTVDELT-PGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVF 133 Query: 361 GTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVEKSST 540 GT ALAVG DVSLDT+T N TKYNA S++N DLIASLNLNNKGDSLTASYYH V S+T Sbjct: 134 GTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNHSAT 193 Query: 541 A 543 A Sbjct: 194 A 194
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 222 bits (566), Expect = 5e-58 Identities = 107/168 (63%), Positives = 135/168 (80%) Frame = +1 Query: 34 KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 213 KF LTT + NG AITA T+K + I GE+ +QIKNK +TVDVKANS S+++TTIT D+ Sbjct: 28 KFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFG 87 Query: 214 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 393 PGLK+I++ VPDQ+SGK+E QYLH+YAG+NAS+GL +NP+VNLS AFG+ AL+VG DV Sbjct: 88 TPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDV 147 Query: 394 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVEKSS 537 S DT+T +FTKYNAA S T+ DLIASL+LNN GD+L ASYYH V+ S Sbjct: 148 SFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHS 195
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 221 bits (564), Expect = 8e-58 Identities = 108/172 (62%), Positives = 137/172 (79%), Gaps = 1/172 (0%) Frame = +1 Query: 31 HKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDL 210 HKF++TTY+ G IT++ +KK DL L ++ +Q+KNKN+T D+K ++ SN+ TTIT D+ Sbjct: 26 HKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDE- 84 Query: 211 AAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGD 390 AAPGLKTILSF VPDQ+SGK+E+QYLHDYAGI S+GLTANP+VN S GT+ +A+G D Sbjct: 85 AAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTD 144 Query: 391 VSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVEK-SSTA 543 VS DT T +FTK NA S+TN DL+ASLNLNNKGD+LTASYYH V +STA Sbjct: 145 VSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTA 196
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 216 bits (551), Expect = 3e-56 Identities = 110/176 (62%), Positives = 137/176 (77%) Frame = +1 Query: 1 LLYRXLPVPXHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASN 180 LLYR V HKFT+TTY+ G AITA+ KK +L L ++ +Q+KNKNIT DVK ++ SN Sbjct: 17 LLYRDY-VSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSN 75 Query: 181 VITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAF 360 V TTIT D+ APGLKTI SF VPDQKSGKVELQYLH+YAGIN SIGLTA+P+VN S Sbjct: 76 VYTTITVDE-PAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVA 134 Query: 361 GTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVE 528 G + +A+G D+S DT+T NFTK NA S+++ DLIASL LN+KGD+++ASYYH V+ Sbjct: 135 GNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVK 190
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 199 bits (505), Expect = 6e-51 Identities = 96/168 (57%), Positives = 126/168 (75%) Frame = +1 Query: 34 KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 213 KFT++TY+ G AIT++ TKK +L LG++ +Q+KNKNIT D+K ++ SN+ TTIT ++ Sbjct: 27 KFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNE-P 85 Query: 214 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 393 APG+K ILSF VP+Q SGKVELQYLH+YAGI++S+GL ANP+VN S+ GT+ALA G D+ Sbjct: 86 APGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADI 145 Query: 394 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVEKSS 537 S DT TK NAA ++ DLI SL LN KGD L+ASYYH + S Sbjct: 146 SFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLS 193
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 195 bits (496), Expect = 6e-50 Identities = 97/164 (59%), Positives = 122/164 (74%) Frame = +1 Query: 34 KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 213 KF++TT++ G AIT+T TKK DL+LG++ Q + KNIT D+K + S + T T D+ A Sbjct: 27 KFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDE-A 85 Query: 214 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 393 APGL++I SF VPDQ SGKVELQYLH+YAGI+ S+GLT NP VN S G++ LAVG DV Sbjct: 86 APGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDV 145 Query: 394 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFV 525 S DT + NFTK NA S+T +DLIASL +N+KGD L ASYYH V Sbjct: 146 SFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIV 189
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 182 bits (462), Expect = 5e-46 Identities = 90/179 (50%), Positives = 123/179 (68%) Frame = +1 Query: 1 LLYRXLPVPXHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASN 180 LLYR KF++TTY++ G AIT T T K L LG++ +Q+KN N T DVK ++ S+ Sbjct: 17 LLYRDYQ-GDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSS 75 Query: 181 VITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAF 360 ++TT+T D+ APGLK I+ +PD KSGK E+QY HDYAGI+ S+G TA P+VN S Sbjct: 76 LLTTLTFDE-PAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVV 134 Query: 361 GTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVEKSS 537 GT+ L++G DV+ +T + NF +NA F++T DL ASL LN+KG+ L ASYY V S+ Sbjct: 135 GTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPST 193
>VDAC_CAEEL (Q21752) Probable voltage-dependent anion-selective channel| Length = 283 Score = 54.7 bits (130), Expect = 2e-07 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 4/141 (2%) Frame = +1 Query: 115 EIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTIL-SFAVPD--QKSGKVELQY 285 +++ +I IT+ K N+ + + T I ++ GLK L S P ++SGKV+L + Sbjct: 60 DVKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDW 119 Query: 286 LHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSY-TNQDL 462 A + A +G+T+ PV+N + F +G + D+S+ + AF + T Q Sbjct: 120 ALPTARVTADVGVTSAPVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYT 179 Query: 463 IASLNLNNKGDSLTASYYHFV 525 + S +N+ AS YH V Sbjct: 180 LHSFVINS--TDFGASLYHKV 198
>VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin| Length = 283 Score = 48.1 bits (113), Expect = 2e-05 Identities = 43/169 (25%), Positives = 62/169 (36%), Gaps = 6/169 (3%) Frame = +1 Query: 55 TANGAAITATSTKKADLIL-GEIQSQIKNK--NITVDVKANSASNVITTITADDLAAPGL 225 T N A T D + G ++ + +K +TV N+A+ + T + D A GL Sbjct: 35 TPNNVAFKVTGKSTHDKVTSGALEGKFTDKPNGLTVTQTWNTANALETKVEMADNLAKGL 94 Query: 226 KT--ILSFA-VPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDVS 396 K I SF + + K L + A L P N+ A G G Sbjct: 95 KAEGIFSFLPATNARGAKFNLHFKQSNFHGRAFFDLLKGPTANIDAIVGHEGFLAGASAG 154 Query: 397 LDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVEKSSTA 543 D T Y+AA Y A++ + +ASYYH V A Sbjct: 155 YDVQKAAITGYSAAVGYHAPTYSAAITATDNLSVFSASYYHKVNSQVEA 203
>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin| Length = 282 Score = 45.4 bits (106), Expect = 1e-04 Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 6/187 (3%) Frame = +1 Query: 1 LLYRXLPVPXHKFTLTTYTANGAAITATSTKKAD-LILGEIQSQIKNK--NITVDVKANS 171 LL R PV ++ T NG + + A +I G++++ +K +T+ + Sbjct: 16 LLQRDFPVGATLLSVRTTAPNGVVFNVSGNQDAKGVISGKLETSFNDKANGLTISQGWTT 75 Query: 172 ASNVITTITADDLAAPGLKTILSFAVPDQKSGK---VELQYLHDYAGINASIGLTANPVV 342 A+ + + + + APGL ++ + K + L++ H +AS+ + Sbjct: 76 ANVLESKVGLSEQFAPGLHLNVNTTFSPATAAKTAILNLEHQHPLIHTHASVNALERKFL 135 Query: 343 NLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHF 522 G G + D N + Y A Y L +L +N ASYYH Sbjct: 136 G-DFTVGHEGFLAGAEFGYDVQKGNVSNYAATIGYLASPLSVALQASNNLSVFRASYYHR 194 Query: 523 VEKSSTA 543 V A Sbjct: 195 VSSDVEA 201
>VDAC2_YEAST (P40478) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 281 Score = 35.0 bits (79), Expect = 0.14 Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 8/171 (4%) Frame = +1 Query: 43 LTTYTANGAAITATSTKKADLILGEIQSQIKNK------NITVDVKANSASNVITTITAD 204 ++T T NG T + K + G IQ+ ++ + +++ ++ + + T I Sbjct: 31 ISTTTENGVNFTLKA--KQGVTEGPIQTSVEGRFYDRKEGVSLSQSWSNQNRLNTRIEFS 88 Query: 205 DLAAPGLK-TILSFAVPDQ-KSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALA 378 +A PG K + +F P K+ K L Y SI + S G Sbjct: 89 KIA-PGWKGDVNAFLTPQSIKNAKFNLSYAQKSFAARTSIDILQPKDFVGSVTLGHRGFV 147 Query: 379 VGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVEK 531 G D++ DT+ +Y + Y ++ L+ NN+ TAS++ V + Sbjct: 148 GGTDIAYDTAAGLCARYAMSIGYLAREYSFILSTNNR-QCATASFFQNVNR 197
>METK_HELPY (P56460) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 385 Score = 32.0 bits (71), Expect = 1.2 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Frame = +1 Query: 295 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAA---------FSY 447 YA + L A+ V + + A+ V VS+ +T N +KY++A F Sbjct: 277 YAARYVAKNLVASGVCDKATVQLAYAIGVIEPVSIYVNTHNTSKYSSAELEKCVKSVFKL 336 Query: 448 TNQDLIASLNLNNKGDSLTASYYHF 522 T + +I SL+L SLT++Y HF Sbjct: 337 TPKGIIESLDLLRPIYSLTSAYGHF 361
>LEU2_MYCSM (Q938C9) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 422 Score = 31.6 bits (70), Expect = 1.5 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +1 Query: 214 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVG-GD 390 APG++ I++ A + L YL D A A I + A FG VG G+ Sbjct: 315 APGVRLIVTPASQQVYRDAMRLGYLQDIADAGAVITNST-----CGACFGYHMGVVGPGE 369 Query: 391 VSLDTSTKNFT 423 V L +ST+NFT Sbjct: 370 VCLTSSTRNFT 380
>POL2_TRSV (Q6UR06) RNA2 polyprotein (P2) [Contains: P2A protein (2A); Movement| protein (2B-MP); Coat protein (2C-CP)] Length = 1101 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%) Frame = +1 Query: 250 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 375 PD +G V Y+HD+A +A++ L +NP+ L AA G A Sbjct: 953 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWPRSKQAQ 1012 Query: 376 AVGGDVSLDTSTKNFTKY 429 A G VS+ T+ +++ Y Sbjct: 1013 AQEGSVSITTNYRDWGAY 1030
>COAT_TRSV (Q88894) Coat protein precursor (Capsid protein)| Length = 515 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%) Frame = +1 Query: 250 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 375 PD +G V Y+HD+A +A++ L +NP+ L AA G A Sbjct: 367 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWSRSKQAQ 426 Query: 376 AVGGDVSLDTSTKNFTKY 429 A G VS+ T+ +++ Y Sbjct: 427 AQEGSVSITTNYRDWGAY 444
>GTFB_STRMU (P08987) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)| (Dextransucrase) (Sucrose 6-glucosyltransferase) Length = 1476 Score = 30.4 bits (67), Expect = 3.4 Identities = 23/69 (33%), Positives = 31/69 (44%) Frame = +1 Query: 10 RXLPVPXHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVIT 189 R + V +T T +G + A S E +SQI N + T V AN SNV T Sbjct: 15 RWVTVSVASAVMTLTTLSGGLVKADSN--------ESKSQISNDSNTSVVTANEESNVTT 66 Query: 190 TITADDLAA 216 +T+ AA Sbjct: 67 EVTSKQEAA 75
>Y4SI_RHISN (P55652) Probable chemoreceptor y4sI (Methyl-accepting chemotaxis| protein) Length = 756 Score = 30.4 bits (67), Expect = 3.4 Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 6/143 (4%) Frame = +1 Query: 58 ANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPG----L 225 A GA I +T T +G + + + N+ + ANS V+T T L+APG Sbjct: 158 AEGAIIYSTGTNP----VGPVDAN-GSINLAIASSANSQEAVMTDFTPPTLSAPGQALYA 212 Query: 226 KTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFG--TSALAVGGDVSL 399 I+ +PD+++G + + + N V+ + FG + AL G D Sbjct: 213 VAIVHPFIPDKRNGTLLISMSTE----------MLNAVMGQAKGFGPHSEALIAGSD-GK 261 Query: 400 DTSTKNFTKYNAAFSYTNQDLIA 468 S + ++ A + N DL++ Sbjct: 262 PRSLSSISRDEDAEAVVNSDLLS 284
>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)| (Transcription factor GATA-B) (dGATA-B) (Protein serpent) Length = 1264 Score = 30.4 bits (67), Expect = 3.4 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 406 MYQATHHHQQLEH*FQTQQRG*L--QDWQSSQCLH*YQHNHVSTGA 275 ++Q HHHQQ H Q QQ+ Q Q Q H + HN+ ++ A Sbjct: 406 LHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSA 451
>RBF1_CANAL (Q00312) Transcription factor RBF1 (RPG-box-binding factor)| (Repressor-activator protein 1) Length = 527 Score = 30.0 bits (66), Expect = 4.4 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -2 Query: 400 QATHHHQQLEH*FQTQQRG*LQDWQSSQCL---H*YQHNHVSTGAPPFQISDQEQQSSRW 230 QA HQQL+H +Q QQ+ Q Q SQ L H QH HV + E SR+ Sbjct: 122 QAQREHQQLQHAYQQQQQ-LHQLGQLSQQLAQPHLSQHEHVRDALTTDEFDTNEDLRSRY 180
>POLG_TEV (P04517) Genome polyprotein [Contains: P1 proteinase (N-terminal| protein); Helper component proteinase (EC 3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2 (6K2); Viral geno Length = 3054 Score = 30.0 bits (66), Expect = 4.4 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 1/98 (1%) Frame = +1 Query: 82 TSTKKADLILGEIQSQIKNK-NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQ 258 TS KK ++ I I+N I +DV + + V+ + D+ A KT++S+ Q Sbjct: 1457 TSVKKHFIVATNI---IENGVTIDIDVVVDFGTKVVPVLDVDNRAVQYNKTVVSYGERIQ 1513 Query: 259 KSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSA 372 K G+V G+ IG T +V + T A Sbjct: 1514 KLGRVG----RHKEGVALRIGQTNKTLVEIPEMVATEA 1547
>FLID_BACHD (Q9K6W0) Flagellar hook-associated protein 2 (HAP2) (Filament cap| protein) (Flagellar cap protein) Length = 532 Score = 30.0 bits (66), Expect = 4.4 Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 11/145 (7%) Frame = +1 Query: 37 FTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVI---TTITADD 207 FT+TTY ++GAA+ + T L + I + + V + NS + + T T Sbjct: 144 FTITTYNSSGAAVEKSFTIDTSKSLDSLFKDINSAGLGVRMSYNSTYDKVIIERTETGAF 203 Query: 208 LAAPGLK--TILSFAVPDQKSGKVELQYLHDYAGINASIG-----LTANPVVNLSAAFGT 366 AA G I+ + ++L ++ +G NA + +++ P+V + T Sbjct: 204 NAADGSNDYQIVFGGDTGFLNDVLKLNQANEVSGTNAEVEFIDPIMSSEPIVVSDSR--T 261 Query: 367 SALAVGG-DVSLDTSTKNFTKYNAA 438 + + VGG SL +T+ F N + Sbjct: 262 NRVTVGGITFSLTGTTEGFETLNVS 286
>METK_HELPJ (Q9ZMN5) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 385 Score = 30.0 bits (66), Expect = 4.4 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Frame = +1 Query: 295 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAA---------FSY 447 YA + L A+ V + + A+ V VS+ +T N +K+++A F Sbjct: 277 YAARYVAKNLVASGVCDKATVQLAYAIGVIEPVSIYVNTHNTSKHSSAELEKCVKSVFKL 336 Query: 448 TNQDLIASLNLNNKGDSLTASYYHF 522 T + +I SL+L SLT++Y HF Sbjct: 337 TPKGIIESLDLLRPIYSLTSAYGHF 361
>METK_LEPIN (Q8CXS7) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 386 Score = 29.3 bits (64), Expect = 7.6 Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = +1 Query: 328 ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSL-- 501 A PV FGT G +S + K + A F T + +I SL L KG Sbjct: 309 AEPVSVHVDTFGT------GKISEEELVK---RIRANFKLTPRGIIESLKLLEKGRKYRE 359 Query: 502 TASYYHFVEKSST 540 TASY HF K ST Sbjct: 360 TASYGHFGRKGST 372
>METK_LEPIC (Q72SM5) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 386 Score = 29.3 bits (64), Expect = 7.6 Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = +1 Query: 328 ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSL-- 501 A PV FGT G +S + K + A F T + +I SL L KG Sbjct: 309 AEPVSVHVDTFGT------GKISEEELVK---RIRANFKLTPRGIIESLKLLEKGRKYRE 359 Query: 502 TASYYHFVEKSST 540 TASY HF K ST Sbjct: 360 TASYGHFGRKGST 372
>PROA_RHOPA (Q6NDE4) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 430 Score = 28.9 bits (63), Expect = 9.9 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = +1 Query: 145 ITVDVKANSASNVITTITAD-DLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 321 +T +KA S +TT+ D A L+ A P+QK+ +E AG + + Sbjct: 1 MTASLKAIDGSAELTTLMTDLGRQARAAARTLALAPPEQKNRALEAMERAIRAGADKILA 60 Query: 322 LTANPVVNLSAAFGTSA 372 A V + AA TSA Sbjct: 61 ANAEDVADAKAAGTTSA 77
>ASA1_ENTFA (P17953) Aggregation substance precursor| Length = 1296 Score = 28.9 bits (63), Expect = 9.9 Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 11/162 (6%) Frame = +1 Query: 88 TKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSG 267 T + + + + + N + DVKA+ + + +++ D P L+T + + V KS Sbjct: 726 TNDGETVTNTVINHVPGSNPSKDVKADK-NGTVGSVSLHDKDIP-LQTKIYYEV---KSS 780 Query: 268 KVELQY--LHDYAGINASIGLTAN-------PVVNLSAAFGTSALAVGGDVSLDTSTKNF 420 + Y + + G+N + T + + N G L G D+S +N Sbjct: 781 ERPANYGGITEEWGMNDVLDTTHDRFTGKWHAITNYDLKVGDKTLKAGTDISAYILLEN- 839 Query: 421 TKYNAAFSYT-NQDLIASLNL-NNKGDSLTASYYHFVEKSST 540 K N ++T NQ L+A+LN +NK S Y VE+ T Sbjct: 840 -KDNKDLTFTMNQALLAALNEGSNKVGKQAWSVYLEVERIKT 880
>LUB1_SCHPO (O94289) Ubiquitin homeostasis protein lub1| Length = 713 Score = 28.9 bits (63), Expect = 9.9 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Frame = +1 Query: 292 DYAGINASIGLT--ANPVVNLSAAFGTSAL--AVGGDVSLDTSTKNFTKYNAAFSYTNQD 459 ++ IN + L +N V N++ A G S L + V +S K+F A + Sbjct: 568 NFESINVMLALRGLSNVVPNITDAEGVSKLMDCLTSTVPQASSAKDFKIAFATLAMNLSI 627 Query: 460 LIASLNLNNKGDSLTASYYHFVEKSS 537 L+ LNL N G L + + F++ S Sbjct: 628 LLIQLNLENTGIELLSILFSFLDDPS 653 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.127 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,204,131 Number of Sequences: 219361 Number of extensions: 1341703 Number of successful extensions: 3130 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3050 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3123 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
