| Clone Name | bags8l20 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA Length = 1159 Score = 771 bits (389), Expect = 0.0 Identities = 485/517 (93%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 125 accacaagttcaccctcaccacctacaccgccaatgggcccgcaattactgctaccagta 184 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 |||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||||| Sbjct: 185 caaagaaggctgatcttacagtcggtgagatccaatcacagatcaagaacaaaaacatca 244 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 | |||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||||| Sbjct: 245 ctgtagatgtgaaggccaactcagcatcgaatgtcattactacaattactgctgacgatc 304 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ttgcagcaccaggcctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 364 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 365 aggttgagctccagtacttgcatgattatgctggtattaatgcaagcattggcttgactg 424 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 |||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| || Sbjct: 425 ccaatcctgtagtcaacctctccggcgcgttcggaactagtgctctagctgttggtgctg 484 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 | ||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| Sbjct: 485 acgtgtcgcttgatacagccaccaagaatttcgccaaatacaatgctgcacttagctaca 544 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcctcaccgcat 508 ||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 545 ctaaccaggatcttatcgcatccctgaacctgaacaacaagggagacagcctgactgcat 604 Query: 509 cctattaccactttgtggagaagtccagcacagctgt 545 ||||||||||| |||||||||| ||| |||||||||| Sbjct: 605 cctattaccacattgtggagaaatccggcacagctgt 641
>gb|AY104870.1| Zea mays PCO081914 mRNA sequence Length = 1445 Score = 373 bits (188), Expect = e-100 Identities = 401/472 (84%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||| ||||||||| ||||||||| ||| | |||||| | || | Sbjct: 277 accacaagttcaccctcactacctacacctccaatggcgtcgctgtaactgcttctagca 336 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||| ||||| ||||| || || ||||||||||||||||| |||||||||||||| | Sbjct: 337 caaagaaagctgacctgatccttggcgagatccaatcacagataaagaacaagaacatga 396 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 || |||||||||| |||||||||| |||||| ||||||| |||||||| | ||| || Sbjct: 397 ccatagatgtgaaagcaaactcggagtcaaatatcattacgacaattactgttgatgaga 456 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 ||||| | |||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 457 ttgcaacaccagggctgaagaccatcttaagctttgctgttcctgatcagagatctggaa 516 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 |||| ||||||||||| || |||||||||||||| ||||||||||||| || |||| | Sbjct: 517 aggttgagctccagtatttgcatgattatgctggagttaatgcaagcatcggtctgacag 576 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 |||||||||||||||||||||||||||| ||||| |||| ||| | || ||||||| | Sbjct: 577 ccaatcctgtagtcaacctctctgctgcctttggtactaaggctgttgcagttggtgccg 636 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 || | || |||||||| | || ||| || || |||||||||||||| | || | || Sbjct: 637 atatctcacttgatactgcaactgggaacttgactaaatacaatgctgcactgaggttca 696 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcct 500 || | |||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 697 ctcatgaagaccttgtcgcatccctgaacctgaacaacaagggagacagcct 748
>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence Length = 1209 Score = 365 bits (184), Expect = 1e-97 Identities = 400/472 (84%) Strand = Plus / Minus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||| ||||||||| ||||||||| ||| | |||||| | || | Sbjct: 1027 accacaagttcaccctcactacctacacctccaatggcgtcgctgtaactgcttctagca 968 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||| ||||| ||||| || || ||||||||||||||||| |||||||||||||| | Sbjct: 967 caaagaaagctgacctgatccttggcgagatccaatcacagataaagaacaagaacatga 908 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 || |||||||||| |||||||||| |||||| |||||||||||||||| | ||| || Sbjct: 907 ccatagatgtgaaagcaaactcggagtcaaatatcattacaacaattactgttgatgaga 848 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 ||||| | |||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 847 ttgcaacaccagggctgaagaccatcttaagctttgctgttcctgatcagagatctggaa 788 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 |||| ||||||||||| || |||||||||||||| ||||||||||||| || |||| | Sbjct: 787 aggttgagctccagtatttgcatgattatgctggagttaatgcaagcatcggtctgacag 728 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 |||||||||||||||||||||||||||| ||||| |||| ||| | || ||||||| | Sbjct: 727 ccaatcctgtagtcaacctctctgctgcctttggtactaaggctgttgcagttggtgccg 668 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 || | || |||||||| | || ||| || || |||||||||||||| | || | || Sbjct: 667 atatctcacttgatactgcaactgggaacttgactaaatacaatgctgcactgaggttca 608 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcct 500 || | |||| ||| |||||||||||||||||||||||||||| | |||||| Sbjct: 607 ctcatgaagaccttgtcgcatccctgaacctgaacaacaagggcgccagcct 556
>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1179 Score = 365 bits (184), Expect = 1e-97 Identities = 400/472 (84%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||| ||||||||| ||||||||| ||| | |||||| | || | Sbjct: 166 accacaagttcaccctcactacctacacctccaatggcgtcgctgtaactgcttctagca 225 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||| ||||| ||||| || || ||||||||||||||||| |||||||||||||| | Sbjct: 226 caaagaaagctgacctgatccttggcgagatccaatcacagataaagaacaagaacatga 285 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 || |||||||||| |||||||||| |||||| ||||||| |||||||| | ||| || Sbjct: 286 ccatagatgtgaaagcaaactcggagtcaaatatcattacgacaattactgttgatgaga 345 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 ||||| | |||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 346 ttgcaacaccagggctgaagaccatcttaagctttgctgttcctgatcagagatctggaa 405 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 |||| ||||||||||| || |||||||||||||| ||||||||||||| || |||| | Sbjct: 406 aggttgagctccagtatttgcatgattatgctggagttaatgcaagcatcggtctgacag 465 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 |||||||||||||||||||||||||||| ||||| |||| ||| | || |||||| | Sbjct: 466 ccaatcctgtagtcaacctctctgctgcctttggtactaaggctgttgcacttggtgccg 525 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 || | || |||||||| | || ||| || || |||||||||||||| | || | || Sbjct: 526 atatctcacttgatactgcaactgggaacttgactaaatacaatgctgcactgaggttca 585 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcct 500 || | |||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 586 ctcatgaagaccttgtcgcatccctgaacctgaacaacaagggagacagcct 637
>ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 339 bits (171), Expect = 6e-90 Identities = 416/497 (83%), Gaps = 3/497 (0%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||| Sbjct: 163 accacaagttcaccctcaccacctacaccagcaatggcgtcgcaatcactgctaccagta 222 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| Sbjct: 223 caaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaagaacatca 282 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 | ||||||||||| |||||||| | |||||||| |||| || | |||| ||| || | Sbjct: 283 ctgtagatgtgaaagcaaactcagactcaaatgttgttactactgtaaccgttgatgagc 342 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 | | | ||||| ||||| |||||||||||||||||||||| ||||| | |||||||| Sbjct: 343 t---aacaccaggattgaagtccatcttgagctttgctgttccggatcaaagatctggaa 399 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 || | ||||| || |||| ||||||||||||||| ||| |||||| ||||| ||||||| Sbjct: 400 agtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggtttgactg 459 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 ||| |||||||||||| ||||| || |||||||| | ||||| |||||||||| || Sbjct: 460 ccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgttggtgctg 519 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 |||| || |||||||| |||| ||| || |||||||| ||||||| || |||| || Sbjct: 520 atgtctcacttgataccgccacggggaacttgaccaaatataatgctggattgagcttca 579 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcctcaccgcat 508 ||| | ||||||||||| || |||||||||||||||||||||| || ||||| |||| Sbjct: 580 gtaatgatgatcttatcgcgtcattgaacctgaacaacaagggagatagtctcactgcat 639 Query: 509 cctattaccactttgtg 525 | ||||||||| ||||| Sbjct: 640 cttattaccacattgtg 656
>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel Length = 1093 Score = 339 bits (171), Expect = 6e-90 Identities = 416/497 (83%), Gaps = 3/497 (0%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||| Sbjct: 100 accacaagttcaccctcaccacctacaccagcaatggcgtcgcaatcactgctaccagta 159 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| Sbjct: 160 caaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaagaacatca 219 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 | ||||||||||| |||||||| | |||||||| |||| || | |||| ||| || | Sbjct: 220 ctgtagatgtgaaagcaaactcagactcaaatgttgttactactgtaaccgttgatgagc 279 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 | | | ||||| ||||| |||||||||||||||||||||| ||||| | |||||||| Sbjct: 280 t---aacaccaggattgaagtccatcttgagctttgctgttccggatcaaagatctggaa 336 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 || | ||||| || |||| ||||||||||||||| ||| |||||| ||||| ||||||| Sbjct: 337 agtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggtttgactg 396 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 ||| |||||||||||| ||||| || |||||||| | ||||| |||||||||| || Sbjct: 397 ccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgttggtgctg 456 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 |||| || |||||||| |||| ||| || |||||||| ||||||| || |||| || Sbjct: 457 atgtctcacttgataccgccacggggaacttgaccaaatataatgctggattgagcttca 516 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcctcaccgcat 508 ||| | ||||||||||| || |||||||||||||||||||||| || ||||| |||| Sbjct: 517 gtaatgatgatcttatcgcgtcattgaacctgaacaacaagggagatagtctcactgcat 576 Query: 509 cctattaccactttgtg 525 | ||||||||| ||||| Sbjct: 577 cttattaccacattgtg 593
>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full insert sequence Length = 1125 Score = 339 bits (171), Expect = 6e-90 Identities = 416/497 (83%), Gaps = 3/497 (0%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||| Sbjct: 163 accacaagttcaccctcaccacctacaccagcaatggcgtcgcaatcactgctaccagta 222 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| Sbjct: 223 caaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaagaacatca 282 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 | ||||||||||| |||||||| | |||||||| |||| || | |||| ||| || | Sbjct: 283 ctgtagatgtgaaagcaaactcagactcaaatgttgttactactgtaaccgttgatgagc 342 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 | | | ||||| ||||| |||||||||||||||||||||| ||||| | |||||||| Sbjct: 343 t---aacaccaggattgaagtccatcttgagctttgctgttccggatcaaagatctggaa 399 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 || | ||||| || |||| ||||||||||||||| ||| |||||| ||||| ||||||| Sbjct: 400 agtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggtttgactg 459 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 ||| |||||||||||| ||||| || |||||||| | ||||| |||||||||| || Sbjct: 460 ccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgttggtgctg 519 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 |||| || |||||||| |||| ||| || |||||||| ||||||| || |||| || Sbjct: 520 atgtctcacttgataccgccacggggaacttgaccaaatataatgctggattgagcttca 579 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcctcaccgcat 508 ||| | ||||||||||| || |||||||||||||||||||||| || ||||| |||| Sbjct: 580 gtaatgatgatcttatcgcgtcattgaacctgaacaacaagggagatagtctcactgcat 639 Query: 509 cctattaccactttgtg 525 | ||||||||| ||||| Sbjct: 640 cttattaccacattgtg 656
>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full insert sequence Length = 1242 Score = 339 bits (171), Expect = 6e-90 Identities = 416/497 (83%), Gaps = 3/497 (0%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||| Sbjct: 177 accacaagttcaccctcaccacctacaccagcaatggcgtcgcaatcactgctaccagta 236 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| Sbjct: 237 caaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaagaacatca 296 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 | ||||||||||| |||||||| | |||||||| |||| || | |||| ||| || | Sbjct: 297 ctgtagatgtgaaagcaaactcagactcaaatgttgttactactgtaaccgttgatgagc 356 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 | | | ||||| ||||| |||||||||||||||||||||| ||||| | |||||||| Sbjct: 357 t---aacaccaggattgaagtccatcttgagctttgctgttccggatcaaagatctggaa 413 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 || | ||||| || |||| ||||||||||||||| ||| |||||| ||||| ||||||| Sbjct: 414 agtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggtttgactg 473 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 ||| |||||||||||| ||||| || |||||||| | ||||| |||||||||| || Sbjct: 474 ccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgttggtgctg 533 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 |||| || |||||||| |||| ||| || |||||||| ||||||| || |||| || Sbjct: 534 atgtctcacttgataccgccacggggaacttgaccaaatataatgctggattgagcttca 593 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcctcaccgcat 508 ||| | ||||||||||| || |||||||||||||||||||||| || ||||| |||| Sbjct: 594 gtaatgatgatcttatcgcgtcattgaacctgaacaacaagggagatagtctcactgcat 653 Query: 509 cctattaccactttgtg 525 | ||||||||| ||||| Sbjct: 654 cttattaccacattgtg 670
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence Length = 1330 Score = 278 bits (140), Expect = 2e-71 Identities = 386/468 (82%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||| ||||||| | ||||||||| ||| | |||||||| || | Sbjct: 226 accacaagttcaccctcactacctacagctccaatggcgtcgctgtcactgctactagca 285 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||| ||||| ||||| || |||||||||| |||||||| |||||||||||||| | Sbjct: 286 caaagaaagctgacctgatcttcagtgagatccattcacagataaagaacaagaacatga 345 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 ||||||||||||| |||||||| | |||||| ||||||| ||| |||| | | || Sbjct: 346 ccgtagatgtgaaagcaaactcagagtcaaatatcattactacagttactgtcaatgaga 405 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 ||||| | ||||| |||||||| ||||| |||||||||||||||||||||| |||||||| Sbjct: 406 ttgcaacaccaggactgaagactatcttaagctttgctgttcctgatcagagatctggaa 465 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 |||| ||||| ||||| || |||||||||||||| ||||||||||| || | |||| | Sbjct: 466 aggttgagcttcagtatttgcatgattatgctggagttaatgcaagcgttagtctgacag 525 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 |||||||||||| ||||||||||||||| ||||| |||| ||||| || ||||||| | Sbjct: 526 ccaatcctgtagccaacctctctgctgcttttggcactaaggctctcgcagttggtgcag 585 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 | | || ||||| | |||| ||| ||||||||||||||||||| || | | || Sbjct: 586 agatctcatttgattctgccactgggaacttcaccaaatacaatgctggattgatgttca 645 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagaca 496 || | |||| |||||||||||||| || |||||||||||||||||| Sbjct: 646 ctcatgaagaccttatcgcatcccttaatatgaacaacaagggagaca 693
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1175 Score = 262 bits (132), Expect = 1e-66 Identities = 384/468 (82%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||| ||||||| | ||||||||| || | |||||||| || | Sbjct: 221 accacaagttcaccctcactacctacagctccaatggcgttgctgtcactgctactagca 280 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||| ||||| ||||| || |||||||||| |||||||| |||||||||||||| | Sbjct: 281 caaagaaagctgacctgatcttcagtgagatccattcacagataaagaacaagaacatga 340 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 ||||||||||||| |||||||| | |||||| ||||||| ||| |||| | | || Sbjct: 341 ccgtagatgtgaaagcaaactcagagtcaaatatcattactacagttactgtcaatgaga 400 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 ||||| | ||||| |||||||| ||||| |||||||||||||||||||||| |||||||| Sbjct: 401 ttgcaacaccaggactgaagactatcttaagctttgctgttcctgatcagagatctggaa 460 Query: 269 aggtggagctccagtacttacatgattatgctggtattaatgcaagcattggcttgactg 328 |||| ||||| ||||| || |||||||||||||| ||||||||||| || | |||| | Sbjct: 461 aggttgagcttcagtatttgcatgattatgctggagttaatgcaagcgttagtctgacag 520 Query: 329 ccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgttggtggtg 388 |||||||||||| |||||||||||||| ||||| |||| ||||| || ||||||| | Sbjct: 521 ccaatcctgtagccaacctctctgctggctttggcactaaggctctcgcagttggtgcag 580 Query: 389 atgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgtttagctaca 448 | | || ||||| | |||| ||| ||||||||||||||||||| || | | || Sbjct: 581 aaatctcatttgattctgccactgggaacttcaccaaatacaatgctggattgatgttca 640 Query: 449 ctaaccaagatcttatcgcatccctgaacctgaacaacaagggagaca 496 || | |||| |||||||||||||| || |||||||||||||||||| Sbjct: 641 ctcatgaagaccttatcgcatcccttaatatgaacaacaagggagaca 688
>gb|AF093538.1|AF093538 Zea mays voltage-dependent anion-selective channel protein mRNA, partial cds Length = 321 Score = 190 bits (96), Expect = 3e-45 Identities = 207/244 (84%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgctaccagta 88 ||||||||||||||||||| ||||||| | ||||||||| ||| | |||||||| || | Sbjct: 74 accacaagttcaccctcactacctacagctccaatggcgtcgctgtcactgctactagca 133 Query: 89 caaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaagaacatca 148 ||||||| ||||| ||||| || |||||||||| |||||||| ||||||| |||||| | Sbjct: 134 caaagaaagctgacctgatcttcagtgagatccattcacagattaagaacacgaacatga 193 Query: 149 ccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgctgacgatc 208 ||||||||||||| |||||||| | |||||| ||||||| ||| |||| || | || Sbjct: 194 ccgtagatgtgaaagcaaactcagagtcaaatatcattactacagttactgcacatgaga 253 Query: 209 ttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaa 268 ||||| | ||||| |||||||| ||||| |||||||||||||||||||||| |||||||| Sbjct: 254 ttgcaacaccaggactgaagactatcttaagctttgctgttcctgatcagagatctggaa 313 Query: 269 aggt 272 |||| Sbjct: 314 aggt 317
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 70 gcaattactgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacag 129 ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 11753142 gcaatcactgctaccagtacaaagaaggctgatctgatttttggtgagatccaatcacag 11753201 Query: 130 atcaagaacaagaacatcaccgtagatgtgaaggcaaactc 170 || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 11753202 ataaagaacaagaacatcactgtagatgtgaaagcaaactc 11753242 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 289 catgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctc 348 ||||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||| Sbjct: 11753818 catgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctc 11753877 Query: 349 tctgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatac 404 || || |||||||| | ||||| |||||||||| |||||| || |||||||| Sbjct: 11753878 tccagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgatac 11753933 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 224 tgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggt 272 ||||| |||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 11753666 tgaagtccatcttgagctttgctgttccggatcaaagatctggaaaggt 11753714 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcg 67 ||||||||||||||||||||||||||||| |||||||| Sbjct: 11752165 accacaagttcaccctcaccacctacaccagcaatggcg 11752203 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 480 gaacaacaagggagacagcctcaccgcatcctattaccactttgtg 525 ||||||||||||||| || ||||| ||||| ||||||||| ||||| Sbjct: 11754653 gaacaacaagggagatagtctcactgcatcttattaccacattgtg 11754698
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 70 gcaattactgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacag 129 ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 187776 gcaatcactgctaccagtacaaagaaggctgatctgatttttggtgagatccaatcacag 187835 Query: 130 atcaagaacaagaacatcaccgtagatgtgaaggcaaactc 170 || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 187836 ataaagaacaagaacatcactgtagatgtgaaagcaaactc 187876 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 289 catgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctc 348 ||||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||| Sbjct: 188452 catgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctc 188511 Query: 349 tctgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatac 404 || || |||||||| | ||||| |||||||||| |||||| || |||||||| Sbjct: 188512 tccagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgatac 188567 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 224 tgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggt 272 ||||| |||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 188300 tgaagtccatcttgagctttgctgttccggatcaaagatctggaaaggt 188348 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcg 67 ||||||||||||||||||||||||||||| |||||||| Sbjct: 186799 accacaagttcaccctcaccacctacaccagcaatggcg 186837 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 480 gaacaacaagggagacagcctcaccgcatcctattaccactttgtg 525 ||||||||||||||| || ||||| ||||| ||||||||| ||||| Sbjct: 189287 gaacaacaagggagatagtctcactgcatcttattaccacattgtg 189332
>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full insert sequence Length = 3071 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 70 gcaattactgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacag 129 ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 1134 gcaatcactgctaccagtacaaagaaggctgatctgatttttggtgagatccaatcacag 1193 Query: 130 atcaagaacaagaacatcaccgtagatgtgaaggcaaactc 170 || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 1194 ataaagaacaagaacatcactgtagatgtgaaagcaaactc 1234 Score = 137 bits (69), Expect = 4e-29 Identities = 153/181 (84%) Strand = Plus / Plus Query: 224 tgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggtggagctccagt 283 ||||| |||||||||||||||||||||| ||||| | |||||||||| | ||||| || | Sbjct: 1658 tgaagtccatcttgagctttgctgttccggatcaaagatctggaaagtttgagcttcaat 1717 Query: 284 acttacatgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtca 343 ||| ||||||||||||||| ||| |||||| ||||| |||||||||| ||||||||||| Sbjct: 1718 actcgcatgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtca 1777 Query: 344 acctctctgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgata 403 | ||||| || |||||||| | ||||| |||||||||| |||||| || ||||||| Sbjct: 1778 atctctccagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgata 1837 Query: 404 c 404 | Sbjct: 1838 c 1838 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcg 67 ||||||||||||||||||||||||||||| |||||||| Sbjct: 157 accacaagttcaccctcaccacctacaccagcaatggcg 195 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 480 gaacaacaagggagacagcctcaccgcatcctattaccactttgtg 525 ||||||||||||||| || ||||| ||||| ||||||||| ||||| Sbjct: 2558 gaacaacaagggagatagtctcactgcatcttattaccacattgtg 2603
>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence Length = 1133 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 214 gcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggtg 273 |||||||| || ||||| || || ||||||| ||| || || ||||| ||||||||||| Sbjct: 335 gcgccaggactcaagacaattttcagctttgttgtaccagaccagaagtctggaaaggta 394 Query: 274 gagctccagtacttacatgattatgctgg 302 |||||||||||||| ||||| |||||||| Sbjct: 395 gagctccagtacttgcatgagtatgctgg 423
>gb|AY023713.1| Oryza sativa microsatellite MRG6038 containing (AACA)X7, closest to marker S13922, genomic sequence Length = 228 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcg 67 ||||||||||||||||||||||||||||| |||||||| Sbjct: 42 accacaagttcaccctcaccacctacaccagcaatggcg 4
>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds Length = 1203 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 247 gttcctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||||||||| | ||||||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 371 gttcctgatcaaaggtctggaaaggtggagcttcaatacttgcatgactatgctggtat 429
>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI Length = 1030 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 256 cagaaatctggaaaggtggagctccagtacttacatgattatgctgg 302 ||||| ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 304 cagaagtctggaaaggtagagctccagtacttgcatgagtatgctgg 350
>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII Length = 1060 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 256 cagaaatctggaaaggtggagctccagtacttacatgattatgctgg 302 ||||| ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 344 cagaagtctggaaaggtagagctccagtacttgcatgagtatgctgg 390
>gb|AF139498.1|AF139498 Prunus armeniaca porin (mPOR) mRNA, nuclear gene encoding mitochondrial product, complete cds Length = 1119 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 223 ctgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggtggagctccag 282 |||||| | ||||| |||||| ||| ||||| |||| |||||| |||||||||||||| Sbjct: 332 ctgaaggcaatctttagctttattgtacctgaccagagatctggcaaggtggagctccaa 391 Query: 283 tacttacatgattatgctggtattaatgcaagcattggcttgactgccaatcc 335 || ||||| |||||||| || | | | |||||||| |||||||||||||| Sbjct: 392 tatcagcatgagtatgctggaataagtactagcattgggttgactgccaatcc 444
>gb|U50900.1|SOU50900 Spinacia oleracea voltage-dependent anion channel protein (SVDAC1) mRNA, complete cds Length = 1180 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 246 tgttcctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctgg 302 |||||||||||||| |||||| ||||| ||||| ||||| || ||||| |||||||| Sbjct: 355 tgttcctgatcagagatctggcaaggttgagcttcagtatttgcatgagtatgctgg 411 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatgg 65 |||||||||||||||| ||||| |||||||||||||| Sbjct: 141 accacaagttcacccttaccacatacaccgccaatgg 177
>gb|AY316739.1| Lotus corniculatus var. japonicus VDAC1.3 mRNA, complete cds Length = 1069 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 223 ctgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggtggagctccag 282 |||||||| || || |||||| | |||| |||||||||||||| |||||||| ||||| Sbjct: 296 ctgaagacaatttttagctttatttttccagatcagaaatctggcaaggtggaactccaa 355 Query: 283 tacttacatgattatgctgg 302 ||| |||||| |||||||| Sbjct: 356 taccaacatgaatatgctgg 375 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacac 56 |||||||||||||| ||||||| ||||| Sbjct: 105 accacaagttcaccatcaccacttacac 132
>gb|AY316738.1| Lotus corniculatus var. japonicus VDAC1.2 mRNA, complete cds Length = 1103 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 247 gttcctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctgg 302 ||||||||||| | |||||||||||||| || |||||||| ||||| |||||||| Sbjct: 319 gttcctgatcaaaggtctggaaaggtggaacttcagtacttgcatgactatgctgg 374
>gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-dependent anion-selective channel mRNA, complete cds; nuclear gene for mitochondrial product Length = 831 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 247 gttcctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctgg 302 |||||||| |||| |||||||||||||| || |||||||| ||||| |||||||| Sbjct: 292 gttcctgaccagaggtctggaaaggtggaacttcagtacttgcatgactatgctgg 347
>gb|DQ296180.1| Brassica rapa clone 219 unknown mRNA Length = 1117 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 250 cctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||||||||||||||| ||||| ||||||||||| | || || ||||||||||| Sbjct: 355 cctgatcagaaatctggcaaggttgagctccagtatctgcacgactatgctggtat 410
>ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacacc 57 |||||||||||||||||||||||| |||| Sbjct: 71 accacaagttcaccctcaccacctgcacc 99
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 29 accacaagttcaccctcaccacctacacc 57 |||||||||||||||||||||||| |||| Sbjct: 22906441 accacaagttcaccctcaccacctgcacc 22906413
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 29 accacaagttcaccctcaccacctacacc 57 |||||||||||||||||||||||| |||| Sbjct: 109998 accacaagttcaccctcaccacctgcacc 109970
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel Length = 1174 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 418 ttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatccctgaac 477 |||||||| |||||||||| | ||| |||||||||||||||||| || || |||| Sbjct: 460 ttcaccaagtacaatgctggactgagccacactaaccaagatcttactgcttcgttgaat 519 Query: 478 ctgaacaacaagg 490 ||||||||||||| Sbjct: 520 ctgaacaacaagg 532
>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene) Length = 1148 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacacc 57 |||||||||||||||||||||||| |||| Sbjct: 144 accacaagttcaccctcaccacctgcacc 172
>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full insert sequence Length = 1151 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacacc 57 |||||||||||||||||||||||| |||| Sbjct: 149 accacaagttcaccctcaccacctgcacc 177
>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full insert sequence Length = 1216 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacacc 57 |||||||||||||||||||||||| |||| Sbjct: 204 accacaagttcaccctcaccacctgcacc 232
>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1129 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgct 81 |||| |||||||| |||||||||||| ||||||| || || || ||||||||| Sbjct: 166 accagaagttcacgctcaccacctacgccgccaacggagctgccattactgct 218
>gb|AY104198.1| Zea mays PCO099812 mRNA sequence Length = 1156 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgct 81 |||| |||||||| |||||||||||| ||||||| || || || ||||||||| Sbjct: 200 accagaagttcacgctcaccacctacgccgccaacggagctgccattactgct 252
>ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 478 ctgaacaacaagggagacagcct 500 ||||||||||||||||||||||| Sbjct: 541 ctgaacaacaagggagacagcct 563
>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene) Length = 1189 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 478 ctgaacaacaagggagacagcct 500 ||||||||||||||||||||||| Sbjct: 580 ctgaacaacaagggagacagcct 602
>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full insert sequence Length = 1231 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 478 ctgaacaacaagggagacagcct 500 ||||||||||||||||||||||| Sbjct: 624 ctgaacaacaagggagacagcct 646
>emb|AL845158.5| Mouse DNA sequence from clone RP23-147E6 on chromosome 4 Contains a component of oligomeric golgi complex 1 (Cog5) pseudogene and part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 198523 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 gagctccagtacttacatgatt 295 |||||||||||||||||||||| Sbjct: 18195 gagctccagtacttacatgatt 18216
>gb|AY819040.1| Symphonia globulifera clone Sg10 microsatellite sequence Length = 167 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccac 50 |||||||||||||||||||||| Sbjct: 1 accacaagttcaccctcaccac 22
>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full insert sequence Length = 1160 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccac 50 |||||||||||||||||||||| Sbjct: 160 accacaagttcaccctcaccac 181
>gb|AY106124.1| Zea mays PCO123686 mRNA sequence Length = 926 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Plus Query: 29 accacaagttcaccctcaccacctacaccgccaatggcgccgcaat 74 |||| |||||| |||||||||||| | || ||||||||| |||||| Sbjct: 202 accagaagttctccctcaccacctgctcccccaatggcgtcgcaat 247
>ref|NM_121513.3| Arabidopsis thaliana voltage-gated ion-selective channel AT5G15090 mRNA, complete cds Length = 1254 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 253 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 381 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 433
>ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 478 ctgaacaacaagggagacagcctcaccgcatcctattacca 518 ||||||||||| || ||||||||||| || ||||| ||||| Sbjct: 646 ctgaacaacaaaggggacagcctcactgcgtcctactacca 686
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gaacaacaagggagacagcct 500 ||||||||||||||||||||| Sbjct: 136032 gaacaacaagggagacagcct 136052
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gaacaacaagggagacagcct 500 ||||||||||||||||||||| Sbjct: 31994 gaacaacaagggagacagcct 32014
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gaacaacaagggagacagcct 500 ||||||||||||||||||||| Sbjct: 68774 gaacaacaagggagacagcct 68794
>emb|AL162273.13| Human DNA sequence from clone RP11-215N21 on chromosome 10 Contains the 3' end of a novel gene and a CpG island, complete sequence Length = 103011 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 tacttacatgattatgctggtattaatgc 311 ||||||||| |||||| |||||||||||| Sbjct: 47336 tacttacatcattatgatggtattaatgc 47308
>gb|AY122918.1| Arabidopsis thaliana putative voltage-dependent anion-selective channel protein hsr2 (At5g15090) mRNA, complete cds Length = 856 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 253 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 298 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 350
>gb|AY063891.1| Arabidopsis thaliana putative voltage-dependent anion-selective channel protein hsr2 (At5g15090) mRNA, complete cds Length = 1250 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 253 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 369 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 421
>gb|AC009386.14| Homo sapiens 12 BAC RP11-447I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164012 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 tacttacatgattatgctggtattaatgc 311 ||||||||| |||||| |||||||||||| Sbjct: 83913 tacttacatcattatgatggtattaatgc 83885
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gaacaacaagggagacagcct 500 ||||||||||||||||||||| Sbjct: 26424083 gaacaacaagggagacagcct 26424103 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gaacaacaagggagacagcct 500 ||||||||||||||||||||| Sbjct: 25619625 gaacaacaagggagacagcct 25619645
>emb|BX829828.1|CNS0A1JA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1028 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 253 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 345 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 397
>emb|BX829727.1|CNS0A1A1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1029 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 253 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 342 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 394
>emb|BX829477.1|CNS0A1F7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZB10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1503 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 253 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 840 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 892
>gb|AY085248.1| Arabidopsis thaliana clone 1417 mRNA, complete sequence Length = 1111 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 253 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 370 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 422
>emb|AJ131391.1|ATH131391 Arabidopsis thaliana mRNA for voltage-dependent anion-selective channel protein Length = 1107 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 253 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 305 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 352 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 404
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 atccctgaacctgaacaacaa 488 ||||||||||||||||||||| Sbjct: 3828902 atccctgaacctgaacaacaa 3828882
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 269 aggtggagctccagtacttacatgattatgctggtat 305 |||||||||| || ||||| ||||| ||||||||||| Sbjct: 120305 aggtggagcttcaatacttgcatgactatgctggtat 120269
>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b, complete sequence Length = 54022 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 269 aggtggagctccagtacttacatgattatgctggtat 305 |||||||||| || ||||| ||||| ||||||||||| Sbjct: 7913 aggtggagcttcaatacttgcatgactatgctggtat 7949
>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence Length = 213387 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 accactttgtggagaagtcc 534 |||||||||||||||||||| Sbjct: 55294 accactttgtggagaagtcc 55313
>gb|AC004763.1| Homo sapiens chromosome 5, P1 clone 854b11 (LBNL H44), complete sequence Length = 87050 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cagatcaagaacaagaacatcacc 150 ||||||||||| |||||||||||| Sbjct: 9281 cagatcaagaaaaagaacatcacc 9304
>gb|AY426768.1| Streptomyces clavuligerus ornithine acetyltransferase (oat1), proclavaminate amidinohydrolase (pah1), beta-lactam synthetase (bls1), and carboxyethyl arginine synthase (ceaS1) genes, complete cds Length = 5945 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 tcaccacctacaccgccaatggcg 67 ||||||||||||||||||| |||| Sbjct: 5239 tcaccacctacaccgccaagggcg 5216
>emb|CR405683.10| Zebrafish DNA sequence from clone CH211-157B13 in linkage group 2, complete sequence Length = 166899 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 gctacactaaccaagatctt 462 |||||||||||||||||||| Sbjct: 7438 gctacactaaccaagatctt 7419
>emb|AL353707.14| Human DNA sequence from clone RP11-553J6 on chromosome 9 Contains a ribosomal protein S19 (RPS19) pseudogene, complete sequence Length = 125373 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 accaagaatttcaccaaata 428 |||||||||||||||||||| Sbjct: 37039 accaagaatttcaccaaata 37058
>emb|AL136231.12| Human DNA sequence from clone RP11-6J24 on chromosome 9p24.1-24.3 Contains the 3' end of the SLC1A1 gene for solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), the 5' end of a novel gene (FLJ10058), the gene for Hsp90-associating relative of Cdc37 (HARC) (FLJ20639), the 3' end of the AK3L1 gene for adenylate kinase 3 like 1 (AK3), a ribosomal protein S6 (RPS6) pseudogene and 3 CpG islands, complete sequence Length = 160012 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tttagctacactaaccaaga 458 |||||||||||||||||||| Sbjct: 89494 tttagctacactaaccaaga 89513
>gb|AC161188.5| Mus musculus chromosome 8, clone RP23-227D17, complete sequence Length = 143672 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 accactttgtggagaagtcc 534 |||||||||||||||||||| Sbjct: 93276 accactttgtggagaagtcc 93295
>emb|BX663493.8| Zebrafish DNA sequence from clone DKEY-183G16 in linkage group 2, complete sequence Length = 34449 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gaaggcaaactcggcatcaa 178 |||||||||||||||||||| Sbjct: 13500 gaaggcaaactcggcatcaa 13481
>gb|AF295653.1| Beta vulgaris voltage-dependent anion channel (por) gene, partial cds Length = 770 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 246 tgttcctgatcagaaatctggaaaggtg 273 |||||||||||||| |||||| |||||| Sbjct: 573 tgttcctgatcagagatctggcaaggtg 600
>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence Length = 159868 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cagatcaagaacaagaacatcacc 150 ||||||||||| |||||||||||| Sbjct: 22075 cagatcaagaaaaagaacatcacc 22098
>gb|AC093133.3| Papio anubis clone RP41-57F8, complete sequence Length = 177993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cagatcaagaacaagaacat 146 |||||||||||||||||||| Sbjct: 161181 cagatcaagaacaagaacat 161200
>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 tttagctacactaaccaaga 458 |||||||||||||||||||| Sbjct: 61868 tttagctacactaaccaaga 61849
>emb|AL954379.17| Mouse DNA sequence from clone RP24-162K15 on chromosome 4, complete sequence Length = 72483 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tgaagaccatcttgagcttt 243 |||||||||||||||||||| Sbjct: 53286 tgaagaccatcttgagcttt 53305
>dbj|AP000484.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-14B22, complete sequences Length = 105149 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 tttagctacactaaccaaga 458 |||||||||||||||||||| Sbjct: 89307 tttagctacactaaccaaga 89288
>gb|BC082227.1| Xenopus laevis hypothetical LOC494637, mRNA (cDNA clone MGC:99384 IMAGE:7205622), complete cds Length = 772 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ttgagctttgctgttcctga 254 |||||||||||||||||||| Sbjct: 582 ttgagctttgctgttcctga 563
>dbj|AB007546.1| Homo sapiens gene for LECT2, complete cds Length = 11134 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cagatcaagaacaagaacatcacc 150 ||||||||||| |||||||||||| Sbjct: 6683 cagatcaagaaaaagaacatcacc 6706
>emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-281I13 (complete covert by PAC RP1-253P07), complete sequence Length = 159876 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 cagatcaagaacaagaacatcacc 150 ||||||||||| |||||||||||| Sbjct: 137801 cagatcaagaaaaagaacatcacc 137778 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,312,150 Number of Sequences: 3902068 Number of extensions: 4312150 Number of successful extensions: 114092 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113839 Number of HSP's gapped (non-prelim): 246 length of query: 545 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 522 effective length of database: 17,143,297,704 effective search space: 8948801401488 effective search space used: 8948801401488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)