| Clone Name | bags8l09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197052.1| Oryza sativa (japonica cultivar-group) putative transcription factor (OSJNBa0012L23.32), mRNA Length = 785 Score = 509 bits (257), Expect = e-141 Identities = 419/469 (89%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 88 ctcctcccc-cagccaagnatgaatgtagaaaagctcaagaaaatggcaggtgccgtgcg 146 ||||||||| |||||||| |||||||| || ||||||||||| ||||||||||| ||||| Sbjct: 92 ctcctccccacagccaag-atgaatgttgacaagctcaagaagatggcaggtgctgtgcg 150 Query: 147 caccggggggaagggtagcatgcgcaggaagaagaaggctgtacacaagaccacaactac 206 ||||||||||||||||||| ||||||| ||||||||||| || || ||||| ||||| || Sbjct: 151 caccggggggaagggtagcgtgcgcagaaagaagaaggcagtccataagactacaaccac 210 Query: 207 agatgacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtat 266 |||||||||||| || ||||| || ||||||||||||||||| |||||||||||||| || Sbjct: 211 agatgacaaaagacttcagagcactctgaaaagagtaggagtaaacaccatccctggcat 270 Query: 267 cgaagaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaagtgca 326 |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 tgaagaggttaacattttcaaggatgatgtggttattcagtttctgaatcctaaagtgca 330 Query: 327 agcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaagaaactgca 386 |||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 331 agcttcaattggtgctaatacatgggttgtcagtggaactccacaaacaaagaagctgca 390 Query: 387 agatctgctgccatcaattatcaatcaacttggtcctgacaacttggacaacctccggag 446 ||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||| Sbjct: 391 ggatctgctgccatcaattatcaaccaacttggtcctgacaacttggataatctgcggag 450 Query: 447 gcttgcagagcaattccaaaagcaggtccctggtggtgccgctggcatcgaggctggtgc 506 |||||||||||||||||||||||||| ||||||| | | | || ||||||||||| Sbjct: 451 gcttgcagagcaattccaaaagcaggctcctggtgcttctggtgaa---gaggctggtgc 507 Query: 507 cagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||| || |||||||||| |||||| ||||||||| ||||||||| Sbjct: 508 cagtgctggagctgctcagggtgacga---tgatgatgttcctgagctt 553
>dbj|AK121674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068E07, full insert sequence Length = 756 Score = 509 bits (257), Expect = e-141 Identities = 419/469 (89%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 88 ctcctcccc-cagccaagnatgaatgtagaaaagctcaagaaaatggcaggtgccgtgcg 146 ||||||||| |||||||| |||||||| || ||||||||||| ||||||||||| ||||| Sbjct: 63 ctcctccccacagccaag-atgaatgttgacaagctcaagaagatggcaggtgctgtgcg 121 Query: 147 caccggggggaagggtagcatgcgcaggaagaagaaggctgtacacaagaccacaactac 206 ||||||||||||||||||| ||||||| ||||||||||| || || ||||| ||||| || Sbjct: 122 caccggggggaagggtagcgtgcgcagaaagaagaaggcagtccataagactacaaccac 181 Query: 207 agatgacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtat 266 |||||||||||| || ||||| || ||||||||||||||||| |||||||||||||| || Sbjct: 182 agatgacaaaagacttcagagcactctgaaaagagtaggagtaaacaccatccctggcat 241 Query: 267 cgaagaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaagtgca 326 |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tgaagaggttaacattttcaaggatgatgtggttattcagtttctgaatcctaaagtgca 301 Query: 327 agcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaagaaactgca 386 |||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 302 agcttcaattggtgctaatacatgggttgtcagtggaactccacaaacaaagaagctgca 361 Query: 387 agatctgctgccatcaattatcaatcaacttggtcctgacaacttggacaacctccggag 446 ||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||| Sbjct: 362 ggatctgctgccatcaattatcaaccaacttggtcctgacaacttggataatctgcggag 421 Query: 447 gcttgcagagcaattccaaaagcaggtccctggtggtgccgctggcatcgaggctggtgc 506 |||||||||||||||||||||||||| ||||||| | | | || ||||||||||| Sbjct: 422 gcttgcagagcaattccaaaagcaggctcctggtgcttctggtgaa---gaggctggtgc 478 Query: 507 cagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||| || |||||||||| |||||| ||||||||| ||||||||| Sbjct: 479 cagtgctggagctgctcagggtgacga---tgatgatgttcctgagctt 524
>gb|BT017723.1| Zea mays clone EL01N0447D03.c mRNA sequence Length = 1077 Score = 494 bits (249), Expect = e-136 Identities = 355/389 (91%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 93 cccccagccaagnatgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccgg 152 |||| ||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || Sbjct: 237 ccccgagccaag-atgaatgttgaaaagctcaagaagatggcaggtgctgtgcgcactgg 295 Query: 153 ggggaagggtagcatgcgcaggaagaagaaggctgtacacaagaccacaactacagatga 212 ||||||||||||||||||||||||||||||||| || |||||||| || || |||||||| Sbjct: 296 ggggaagggtagcatgcgcaggaagaagaaggcagtccacaagactacgaccacagatga 355 Query: 213 caaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatcgaaga 272 |||||||| ||||| |||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 356 taaaaggcttcagagcaccctgaaaagaataggagtgaacaccattcctggtattgaaga 415 Query: 273 ggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttc 332 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 416 ggtcaacatctttaaggatgatgttgttattcagtttgtgaatcctaaagtgcaagcttc 475 Query: 333 aattggcgctaatacatgggtggtcagtggaactccacagacaaagaaactgcaagatct 392 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 476 aattggtgctaatacatgggtggtcagtggaactccacagacaaagaagctgcaagatct 535 Query: 393 gctgccatcaattatcaatcaacttggtcctgacaacttggacaacctccggaggcttgc 452 ||| || || |||||||| || || || ||||||||| | |||||||| ||||||||||| Sbjct: 536 gcttccgtccattatcaaccagctcggccctgacaacctagacaacctgcggaggcttgc 595 Query: 453 agagcaattccaaaagcaggtccctggtg 481 ||||||||||| ||||||| |||||||| Sbjct: 596 ggagcaattccagaagcaggcccctggtg 624
>gb|AY108350.1| Zea mays PCO126681 mRNA sequence Length = 951 Score = 494 bits (249), Expect = e-136 Identities = 355/389 (91%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 93 cccccagccaagnatgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccgg 152 |||| ||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || Sbjct: 116 ccccgagccaag-atgaatgttgaaaagctcaagaagatggcaggtgctgtgcgcactgg 174 Query: 153 ggggaagggtagcatgcgcaggaagaagaaggctgtacacaagaccacaactacagatga 212 ||||||||||||||||||||||||||||||||| || |||||||| || || |||||||| Sbjct: 175 ggggaagggtagcatgcgcaggaagaagaaggcagtccacaagactacgaccacagatga 234 Query: 213 caaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatcgaaga 272 |||||||| ||||| |||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 235 taaaaggcttcagagcaccctgaaaagaataggagtgaacaccattcctggtattgaaga 294 Query: 273 ggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttc 332 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 295 ggtcaacatctttaaggatgatgttgttattcagtttgtgaatcctaaagtgcaagcttc 354 Query: 333 aattggcgctaatacatgggtggtcagtggaactccacagacaaagaaactgcaagatct 392 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 355 aattggtgctaatacatgggtggtcagtggaactccacagacaaagaagctgcaagatct 414 Query: 393 gctgccatcaattatcaatcaacttggtcctgacaacttggacaacctccggaggcttgc 452 ||| || || |||||||| || || || ||||||||| | |||||||| ||||||||||| Sbjct: 415 gcttccgtccattatcaaccagctcggccctgacaacctagacaacctgcggaggcttgc 474 Query: 453 agagcaattccaaaagcaggtccctggtg 481 ||||||||||| ||||||| |||||||| Sbjct: 475 ggagcaattccagaagcaggcccctggtg 503
>gb|AY104643.1| Zea mays PCO126682 mRNA sequence Length = 901 Score = 468 bits (236), Expect = e-128 Identities = 341/376 (90%) Strand = Plus / Plus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 113 atgaatgttgaaaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagc 172 Query: 166 atgcgcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccag 225 ||||||||||||||||||| || |||||||| ||||| |||||||||||| |||| || Sbjct: 173 gtgcgcaggaagaagaaggcagtccacaagactacaaccacagatgacaaacggcttcaa 232 Query: 226 agtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatcttt 285 || ||| |||||||| |||||||||||| ||| |||||||| |||||||||||||||||| Sbjct: 233 agcaccttgaaaagaataggagtgaacagcattcctggtattgaagaggtcaacatcttt 292 Query: 286 aaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaat 345 ||||||||||| |||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 293 aaggatgatgttgttattcagtttgtaaatcctaaagtgcaagcgtcaattggtgctaat 352 Query: 346 acatgggtggtcagtggaactccacagacaaagaaactgcaagatctgctgccatcaatt 405 ||||||||||||||||||||||||||||||||||| |||||||||||||| || || ||| Sbjct: 353 acatgggtggtcagtggaactccacagacaaagaagctgcaagatctgcttccgtcgatt 412 Query: 406 atcaatcaacttggtcctgacaacttggacaacctccggaggcttgcagagcaattccaa 465 ||||| || ||||||||||||||| ||||||| || |||||||| |||||||||||||| Sbjct: 413 atcaaccagcttggtcctgacaacctggacaatctgcggaggctcgcagagcaattccag 472 Query: 466 aagcaggtccctggtg 481 ||||||| | |||||| Sbjct: 473 aagcaggcctctggtg 488
>gb|BT017386.1| Zea mays clone EL01N0327A01.c mRNA sequence Length = 896 Score = 460 bits (232), Expect = e-126 Identities = 340/376 (90%) Strand = Plus / Plus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 114 atgaatgttgacaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagc 173 Query: 166 atgcgcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccag 225 ||||||||||||||||||| || |||||||| ||||| |||||||||||| |||| || Sbjct: 174 gtgcgcaggaagaagaaggcagtccacaagactacaaccacagatgacaaacggcttcaa 233 Query: 226 agtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatcttt 285 || ||| |||||||| |||||||||||| ||| |||||||| |||||||||||||||||| Sbjct: 234 agcaccttgaaaagaataggagtgaacagcattcctggtattgaagaggtcaacatcttt 293 Query: 286 aaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaat 345 ||||||||||| |||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 294 aaggatgatgttgttattcagtttgtaaatcctaaagtgcaagcgtcaattggtgctaat 353 Query: 346 acatgggtggtcagtggaactccacagacaaagaaactgcaagatctgctgccatcaatt 405 ||||||||||||||||||||||||||||||||||| |||||||||||||| || || ||| Sbjct: 354 acatgggtggtcagtggaactccacagacaaagaagctgcaagatctgcttccgtcgatt 413 Query: 406 atcaatcaacttggtcctgacaacttggacaacctccggaggcttgcagagcaattccaa 465 ||||| || ||||||||||||||| ||||||| || |||||||| |||||||||||||| Sbjct: 414 atcaaccagcttggtcctgacaacctggacaatctgcggaggctcgcagagcaattccag 473 Query: 466 aagcaggtccctggtg 481 ||||||| | |||||| Sbjct: 474 aagcaggcctctggtg 489
>gb|AY224531.1| Oryza sativa (japonica cultivar-group) isolate 23311 putative transcription factor BTF3 mRNA, complete cds Length = 360 Score = 418 bits (211), Expect = e-114 Identities = 292/319 (91%) Strand = Plus / Plus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 1 atgaatgttgacaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagc 60 Query: 166 atgcgcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccag 225 ||||||| ||||||||||| || || ||||| ||||| |||||||||||||| || ||| Sbjct: 61 gtgcgcagaaagaagaaggcagtccataagactacaaccacagatgacaaaagacttcag 120 Query: 226 agtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatcttt 285 || || ||||||||||||||||| |||||||||||||| || |||||||| ||||| || Sbjct: 121 agcactctgaaaagagtaggagtaaacaccatccctggcattgaagaggttaacattttc 180 Query: 286 aaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaat 345 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 181 aaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggtgctaat 240 Query: 346 acatgggtggtcagtggaactccacagacaaagaaactgcaagatctgctgccatcaatt 405 |||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 241 acatgggttgtcagtggaactccacaaacaaagaagctgcaggatctgctgccatcaatt 300 Query: 406 atcaatcaacttggtcctg 424 ||||| ||||||||||||| Sbjct: 301 atcaaccaacttggtcctg 319
>ref|XM_468566.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1848 Score = 333 bits (168), Expect = 4e-88 Identities = 318/368 (86%) Strand = Plus / Plus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||| ||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct: 1321 atgaatgtcgacaagcttaagaagatggcgggtgccgtgcgcaccggtggcaagggcagc 1380 Query: 166 atgcgcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccag 225 |||||||||||||||||||| || |||||||| || || || |||||||| ||||| || Sbjct: 1381 atgcgcaggaagaagaaggcagttcacaagactaccaccactgatgacaagaggcttcaa 1440 Query: 226 agtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatcttt 285 || ||| ||||||||||||||||||||| ||| |||||||||||||||||||| ||||| Sbjct: 1441 agcaccttgaaaagagtaggagtgaacaacattcctggtatcgaagaggtcaatatcttc 1500 Query: 286 aaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaat 345 ||||||||||||||||| || |||| |||||| ||||||||||| || ||||| || ||| Sbjct: 1501 aaggatgatgtggttatccaatttcagaatccaaaagtgcaagcatccattggtgcaaat 1560 Query: 346 acatgggtggtcagtggaactccacagacaaagaaactgcaagatctgctgccatcaatt 405 |||||||| || |||||||| |||||||| ||||| |||||||||||||| ||| |||| Sbjct: 1561 acatgggtagtgagtggaacaccacagacgaagaagctgcaagatctgcttccaacaatc 1620 Query: 406 atcaatcaacttggtcctgacaacttggacaacctccggaggcttgcagagcaattccaa 465 ||||| || | || ||||| ||| ||||||||||| |||||||||| ||||| ||||| Sbjct: 1621 atcaaccagttgggacctgataacctggacaacctcaggaggcttgctgagcagttccag 1680 Query: 466 aagcaggt 473 |||||||| Sbjct: 1681 aagcaggt 1688 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/60 (86%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| Sbjct: 1699 gaggctggtgccagcgcaggtaacgctcagg---acgacgacgatgatgtccctgagctt 1755
>gb|AY224525.1| Oryza sativa (japonica cultivar-group) isolate 20946 putative transcription factor BTF3 mRNA, complete cds Length = 528 Score = 333 bits (168), Expect = 4e-88 Identities = 318/368 (86%) Strand = Plus / Plus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||| ||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct: 1 atgaatgtcgacaagcttaagaagatggcgggtgccgtgcgcaccggtggcaagggcagc 60 Query: 166 atgcgcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccag 225 |||||||||||||||||||| || |||||||| || || || |||||||| ||||| || Sbjct: 61 atgcgcaggaagaagaaggcagttcacaagactaccaccactgatgacaagaggcttcaa 120 Query: 226 agtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatcttt 285 || ||| ||||||||||||||||||||| ||| |||||||||||||||||||| ||||| Sbjct: 121 agcaccttgaaaagagtaggagtgaacaacattcctggtatcgaagaggtcaatatcttc 180 Query: 286 aaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaat 345 ||||||||||||||||| || |||| |||||| ||||||||||| || ||||| || ||| Sbjct: 181 aaggatgatgtggttatccaatttcagaatccaaaagtgcaagcatccattggtgcaaat 240 Query: 346 acatgggtggtcagtggaactccacagacaaagaaactgcaagatctgctgccatcaatt 405 |||||||| || |||||||| |||||||| ||||| |||||||||||||| ||| |||| Sbjct: 241 acatgggtagtgagtggaacaccacagacgaagaagctgcaagatctgcttccaacaatc 300 Query: 406 atcaatcaacttggtcctgacaacttggacaacctccggaggcttgcagagcaattccaa 465 ||||| || | || ||||| ||| ||||||||||| |||||||||| ||||| ||||| Sbjct: 301 atcaaccagttgggacctgataacctggacaacctcaggaggcttgctgagcagttccag 360 Query: 466 aagcaggt 473 |||||||| Sbjct: 361 aagcaggt 368 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/60 (86%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| Sbjct: 379 gaggctggtgccagcgcaggtaacgctcagg---acgacgacgatgatgtccctgagctt 435
>dbj|AK121478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H07, full insert sequence Length = 871 Score = 333 bits (168), Expect = 4e-88 Identities = 318/368 (86%) Strand = Plus / Plus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||| ||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct: 140 atgaatgtcgacaagcttaagaagatggcgggtgccgtgcgcaccggtggcaagggcagc 199 Query: 166 atgcgcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccag 225 |||||||||||||||||||| || |||||||| || || || |||||||| ||||| || Sbjct: 200 atgcgcaggaagaagaaggcagttcacaagactaccaccactgatgacaagaggcttcaa 259 Query: 226 agtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatcttt 285 || ||| ||||||||||||||||||||| ||| |||||||||||||||||||| ||||| Sbjct: 260 agcaccttgaaaagagtaggagtgaacaacattcctggtatcgaagaggtcaatatcttc 319 Query: 286 aaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaat 345 ||||||||||||||||| || |||| |||||| ||||||||||| || ||||| || ||| Sbjct: 320 aaggatgatgtggttatccaatttcagaatccaaaagtgcaagcatccattggtgcaaat 379 Query: 346 acatgggtggtcagtggaactccacagacaaagaaactgcaagatctgctgccatcaatt 405 |||||||| || |||||||| |||||||| ||||| |||||||||||||| ||| |||| Sbjct: 380 acatgggtagtgagtggaacaccacagacgaagaagctgcaagatctgcttccaacaatc 439 Query: 406 atcaatcaacttggtcctgacaacttggacaacctccggaggcttgcagagcaattccaa 465 ||||| || | || ||||| ||| ||||||||||| |||||||||| ||||| ||||| Sbjct: 440 atcaaccagttgggacctgataacctggacaacctcaggaggcttgctgagcagttccag 499 Query: 466 aagcaggt 473 |||||||| Sbjct: 500 aagcaggt 507 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/60 (86%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| Sbjct: 518 gaggctggtgccagcgcaggtaacgctcagg---acgacgacgatgatgtccctgagctt 574
>dbj|AK061661.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E03, full insert sequence Length = 648 Score = 246 bits (124), Expect = 7e-62 Identities = 244/284 (85%) Strand = Plus / Plus Query: 190 cacaagaccacaactacagatgacaaaaggctccagagtaccctgaaaagagtaggagtg 249 |||||||| || || || |||||||| ||||| || || ||| ||||||||||||||||| Sbjct: 8 cacaagactaccaccactgatgacaagaggcttcaaagcaccttgaaaagagtaggagtg 67 Query: 250 aacaccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagttt 309 |||| ||| |||||||||||||||||||| ||||| ||||||||||||||||| || ||| Sbjct: 68 aacaacattcctggtatcgaagaggtcaatatcttcaaggatgatgtggttatccaattt 127 Query: 310 ctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtggtcagtggaactcca 369 | |||||| ||||||||||| || ||||| || ||||||||||| || |||||||| ||| Sbjct: 128 cagaatccaaaagtgcaagcatccattggtgcaaatacatgggtagtgagtggaacacca 187 Query: 370 cagacaaagaaactgcaagatctgctgccatcaattatcaatcaacttggtcctgacaac 429 ||||| ||||| |||||||||||||| ||| |||| ||||| || | || ||||| ||| Sbjct: 188 cagacgaagaagctgcaagatctgcttccaacaatcatcaaccagttgggacctgataac 247 Query: 430 ttggacaacctccggaggcttgcagagcaattccaaaagcaggt 473 ||||||||||| |||||||||| ||||| ||||| |||||||| Sbjct: 248 ctggacaacctcaggaggcttgctgagcagttccagaagcaggt 291 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/60 (86%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| Sbjct: 302 gaggctggtgccagcgcaggtaacgctcagg---acgacgacgatgatgtccctgagctt 358
>gb|AY103817.1| Zea mays PCO108140 mRNA sequence Length = 904 Score = 238 bits (120), Expect = 2e-59 Identities = 312/376 (82%) Strand = Plus / Plus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||||||||| ||||| ||||| |||||||| || || ||||| ||| Sbjct: 95 atgaatgtggagaagctcaagaagatggcgggtgctgtgcgcactggaggaaagggcagc 154 Query: 166 atgcgcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccag 225 |||||||||||||||||||| || ||||||||| |||| || |||||||| |||| ||| Sbjct: 155 atgcgcaggaagaagaaggcagtccacaagaccgcaaccaccgatgacaagcggcttcag 214 Query: 226 agtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatcttt 285 || || |||||||| | ||||||||||| || |||||||| || |||||||||||||| Sbjct: 215 agcacgttgaaaagaattggagtgaacactattcctggtattgaggaggtcaacatcttc 274 Query: 286 aaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaat 345 ||||||||| | ||||| || || | ||| |||||||||||||| || ||| || ||| Sbjct: 275 aaggatgatattgttatccaattccagaaccctaaagtgcaagcatccattcctgcaaat 334 Query: 346 acatgggtggtcagtggaactccacagacaaagaaactgcaagatctgctgccatcaatt 405 |||||||| ||||||||| || |||||||| | || ||||| || |||||| ||||| Sbjct: 335 acatgggtagtcagtggagtaccccagacaaaaagtctacaagaccttctgccaacaatt 394 Query: 406 atcaatcaacttggtcctgacaacttggacaacctccggaggcttgcagagcaattccaa 465 ||||| ||||| || ||||| ||| |||| |||||| ||||||||| ||||| ||||| Sbjct: 395 atcaaccaactgggccctgataacctggagaacctcaagaggcttgctgagcatttccag 454 Query: 466 aagcaggtccctggtg 481 |||||||| ||||||| Sbjct: 455 aagcaggtacctggtg 470
>dbj|AK069885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037P03, full insert sequence Length = 1334 Score = 202 bits (102), Expect = 9e-49 Identities = 183/210 (87%) Strand = Plus / Plus Query: 170 gcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagta 229 |||||||||||||||| || |||||||| || || || |||||||| ||||| || || | Sbjct: 419 gcaggaagaagaaggcagttcacaagactaccaccactgatgacaagaggcttcaaagca 478 Query: 230 ccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaagg 289 || ||||||||||||||||||||| ||| |||||||||||||||||||| ||||| |||| Sbjct: 479 ccttgaaaagagtaggagtgaacaacattcctggtatcgaagaggtcaatatcttcaagg 538 Query: 290 atgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacat 349 ||||||||||||| || |||| |||||| ||||||||||| || ||||| || ||||||| Sbjct: 539 atgatgtggttatccaatttcagaatccaaaagtgcaagcatccattggtgcaaatacat 598 Query: 350 gggtggtcagtggaactccacagacaaaga 379 |||| || |||||||| |||||||| |||| Sbjct: 599 gggtagtgagtggaacaccacagacgaaga 628 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 382 ctgcaagatctgctgccatcaattatcaatcaacttggtcctgacaacttggacaacctc 441 |||||||||||||| ||| |||| ||||| || | || ||||| ||| ||||||||||| Sbjct: 865 ctgcaagatctgcttccaacaatcatcaaccagttgggacctgataacctggacaacctc 924 Query: 442 cggaggcttgcagagcaattccaaaagcaggt 473 |||||||||| ||||| ||||| |||||||| Sbjct: 925 aggaggcttgctgagcagttccagaagcaggt 956 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/60 (86%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| Sbjct: 967 gaggctggtgccagcgcaggtaacgctcagg---acgacgacgatgatgtccctgagctt 1023
>gb|AY651062.1| Musa acuminata BTF3b-like transcription factor mRNA, complete cds Length = 646 Score = 180 bits (91), Expect = 3e-42 Identities = 250/303 (82%) Strand = Plus / Plus Query: 114 agaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagcatgcgcag 173 |||||| |||| ||| ||||||||||| || ||||| || || || || || |||||||| Sbjct: 96 agaaaaactcatgaagatggcaggtgcagtccgcactggtggaaaaggcagtatgcgcag 155 Query: 174 gaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccct 233 |||||||||||| || ||||||||| |||||||||||||||||||||| || || || || Sbjct: 156 gaagaagaaggcagttcacaagaccccaactacagatgacaaaaggcttcaaagcactct 215 Query: 234 gaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatga 293 ||||||| | || |||||||| ||||||| ||| ||||| ||||| || ||||| ||||| Sbjct: 216 gaaaagaattggggtgaacactatccctgctatagaagaagtcaatatttttaaagatga 275 Query: 294 tgtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggt 353 | || || ||||||| ||||| ||||||||||||||||||| || ||||||||||| Sbjct: 276 cattgtcatccagtttcctaatccaaaagtgcaagcttcaattgcagccaatacatgggt 335 Query: 354 ggtcagtggaactccacagacaaagaaactgcaagatctgctgccatcaattatcaatca 413 ||||| || |||| ||||| || ||||| |||||| |||| || |||| ||||| || Sbjct: 336 tgtcagcggttctccccagactaaaaaacttcaagatttgctacctgcaatcatcaacca 395 Query: 414 act 416 ||| Sbjct: 396 act 398
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Minus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 ||||||||||| || || ||||| ||||| |||||||||||||| || ||||| || ||| Sbjct: 81791 aagaagaaggcagtccataagactacaaccacagatgacaaaagacttcagagcactctg 81732 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 |||||||||||||| |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 81731 aaaagagtaggagtaaacaccatccctggcattgaagaggttaacattttcaaggatgat 81672 Query: 295 gtggttattcagtttctgaatcctaaag 322 |||||||||||||||||||||||||||| Sbjct: 81671 gtggttattcagtttctgaatcctaaag 81644 Score = 99.6 bits (50), Expect = 9e-18 Identities = 117/138 (84%), Gaps = 6/138 (4%) Strand = Plus / Minus Query: 418 ggtcctgacaacttggacaacctccggaggcttgcagagcaattccaaaagcaggtccct 477 ||||||||||||||||| || || ||||||||||||||||||||||||||||||| ||| Sbjct: 80963 ggtcctgacaacttggataatctgcggaggcttgcagagcaattccaaaagcaggctcct 80904 Query: 478 ggtggtgccgctggcatcgaggctggtgccagtgcaggtgctgctcaggctgacgacgat 537 |||| | | | || ||||||||||||||||| || |||||||||| |||| ||| Sbjct: 80903 ggtgcttctggtgaa---gaggctggtgccagtgctggagctgctcagggtgac---gat 80850 Query: 538 gatgatgtccctgagctt 555 |||||||| ||||||||| Sbjct: 80849 gatgatgttcctgagctt 80832 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 82382 atgaatgttgacaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagc 82323 Query: 166 atgcgcagg 174 |||||||| Sbjct: 82322 gtgcgcagg 82314 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 321 agtgcaagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaaga 379 |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 81557 agtgcaagcttcaattggtgctaatacatgggttgtcagtggaactccacaaacaaaga 81499 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 382 ctgcaagatctgctgccatcaattatcaatcaacttggt 420 ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 81222 ctgcaggatctgctgccatcaattatcaaccaacttggt 81184
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Minus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 ||||||||||| || || ||||| ||||| |||||||||||||| || ||||| || ||| Sbjct: 17726671 aagaagaaggcagtccataagactacaaccacagatgacaaaagacttcagagcactctg 17726612 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 |||||||||||||| |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 17726611 aaaagagtaggagtaaacaccatccctggcattgaagaggttaacattttcaaggatgat 17726552 Query: 295 gtggttattcagtttctgaatcctaaag 322 |||||||||||||||||||||||||||| Sbjct: 17726551 gtggttattcagtttctgaatcctaaag 17726524 Score = 99.6 bits (50), Expect = 9e-18 Identities = 117/138 (84%), Gaps = 6/138 (4%) Strand = Plus / Minus Query: 418 ggtcctgacaacttggacaacctccggaggcttgcagagcaattccaaaagcaggtccct 477 ||||||||||||||||| || || ||||||||||||||||||||||||||||||| ||| Sbjct: 17725843 ggtcctgacaacttggataatctgcggaggcttgcagagcaattccaaaagcaggctcct 17725784 Query: 478 ggtggtgccgctggcatcgaggctggtgccagtgcaggtgctgctcaggctgacgacgat 537 |||| | | | || ||||||||||||||||| || |||||||||| |||| ||| Sbjct: 17725783 ggtgcttctggtgaa---gaggctggtgccagtgctggagctgctcagggtgac---gat 17725730 Query: 538 gatgatgtccctgagctt 555 |||||||| ||||||||| Sbjct: 17725729 gatgatgttcctgagctt 17725712 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 17727262 atgaatgttgacaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagc 17727203 Query: 166 atgcgcagg 174 |||||||| Sbjct: 17727202 gtgcgcagg 17727194 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 321 agtgcaagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaaga 379 |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 17726437 agtgcaagcttcaattggtgctaatacatgggttgtcagtggaactccacaaacaaaga 17726379 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 382 ctgcaagatctgctgccatcaattatcaatcaacttggt 420 ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 17726102 ctgcaggatctgctgccatcaattatcaaccaacttggt 17726064
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Minus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 ||||||||||| || || ||||| ||||| |||||||||||||| || ||||| || ||| Sbjct: 17735924 aagaagaaggcagtccataagactacaaccacagatgacaaaagacttcagagcactctg 17735865 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 |||||||||||||| |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 17735864 aaaagagtaggagtaaacaccatccctggcattgaagaggttaacattttcaaggatgat 17735805 Query: 295 gtggttattcagtttctgaatcctaaag 322 |||||||||||||||||||||||||||| Sbjct: 17735804 gtggttattcagtttctgaatcctaaag 17735777 Score = 99.6 bits (50), Expect = 9e-18 Identities = 117/138 (84%), Gaps = 6/138 (4%) Strand = Plus / Minus Query: 418 ggtcctgacaacttggacaacctccggaggcttgcagagcaattccaaaagcaggtccct 477 ||||||||||||||||| || || ||||||||||||||||||||||||||||||| ||| Sbjct: 17735096 ggtcctgacaacttggataatctgcggaggcttgcagagcaattccaaaagcaggctcct 17735037 Query: 478 ggtggtgccgctggcatcgaggctggtgccagtgcaggtgctgctcaggctgacgacgat 537 |||| | | | || ||||||||||||||||| || |||||||||| ||||| || Sbjct: 17735036 ggtgcttctggtgaa---gaggctggtgccagtgctggagctgctcagggtgacg---at 17734983 Query: 538 gatgatgtccctgagctt 555 |||||||| ||||||||| Sbjct: 17734982 gatgatgttcctgagctt 17734965 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 17736515 atgaatgttgacaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagc 17736456 Query: 166 atgcgcagg 174 |||||||| Sbjct: 17736455 gtgcgcagg 17736447 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 321 agtgcaagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaaga 379 |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 17735690 agtgcaagcttcaattggtgctaatacatgggttgtcagtggaactccacaaacaaaga 17735632 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 382 ctgcaagatctgctgccatcaattatcaatcaacttggt 420 ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 17735355 ctgcaggatctgctgccatcaattatcaaccaacttggt 17735317
>gb|DQ205664.1| Glycine cyrtoloba BTF3-like protein 1 gene, partial sequence Length = 1239 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 301 aagaagaaggctgtccacaagacaacaaccacagatgacaaaaggcttcagagcaccctg 360 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| |||| ||||| ||||||||| ||| ||||||||||| ||||||||||||||| Sbjct: 361 aagagaataggggtgaatgccatccctgctattgaagaggtcaatatctttaaggatgat 420 Query: 295 gtggttattcagtttctgaatcctaaag 322 || ||||| |||||||| ||||| |||| Sbjct: 421 gtagttatccagtttctaaatcccaaag 448
>gb|DQ205662.1| Glycine falcata BTF3-like protein 1 gene, partial sequence Length = 1234 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 308 aagaagaaggctgtccacaagacaacaaccacagatgacaaaaggcttcagagcaccctg 367 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| |||| ||||| ||||||||| ||| ||||||||||| ||||||||||||||| Sbjct: 368 aagagaataggggtgaatgccatccctgctattgaagaggtcaatatctttaaggatgat 427 Query: 295 gtggttattcagtttctgaatcctaaag 322 || ||||| |||||||| ||||| |||| Sbjct: 428 gtagttatccagtttctaaatcccaaag 455
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 153 bits (77), Expect = 7e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 170 gcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagta 229 |||||||||||||||| || |||||||| || || || |||||||| ||||| || || | Sbjct: 539881 gcaggaagaagaaggcagttcacaagactaccaccactgatgacaagaggcttcaaagca 539822 Query: 230 ccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaagg 289 || ||||||||||||||||||||| ||| |||||||||||||||||||| ||||| |||| Sbjct: 539821 ccttgaaaagagtaggagtgaacaacattcctggtatcgaagaggtcaatatcttcaagg 539762 Query: 290 atgatgtggttattcagtttctgaatcctaaag 322 ||||||||||||| || |||| |||||| |||| Sbjct: 539761 atgatgtggttatccaatttcagaatccaaaag 539729 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||| ||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct: 540367 atgaatgtcgacaagcttaagaagatggcgggtgccgtgcgcaccggtggcaagggcagc 540308 Query: 166 atgcgcagg 174 ||||||||| Sbjct: 540307 atgcgcagg 540299 Score = 69.9 bits (35), Expect = 8e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 172 aggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtacc 231 |||||||||||||| || |||||||| || || || ||||| ||||| ||||| || Sbjct: 35518736 aggaagaagaaggccgtccacaagacggggaccactgacgacaagaggctgcagagcacg 35518795 Query: 232 ctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggat 291 || || |||||||| || ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 35518796 ctcaagagagtaggtgtcaacaccatccccgcgatcgaggaggtcaacatcttcaaggat 35518855 Query: 292 gat 294 ||| Sbjct: 35518856 gat 35518858 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 421 cctgacaacttggacaacctccggaggcttgcagagcaattccaaaagcaggt 473 ||||| ||| ||||||||||| |||||||||| ||||| ||||| |||||||| Sbjct: 539143 cctgataacctggacaacctcaggaggcttgctgagcagttccagaagcaggt 539091 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 321 agtgcaagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaaga 379 ||||||||| || ||||| || ||||||||||| || |||||||| |||||||| |||| Sbjct: 539639 agtgcaagcatccattggtgcaaatacatgggtagtgagtggaacaccacagacgaaga 539581 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/60 (86%), Gaps = 3/60 (5%) Strand = Plus / Minus Query: 496 gaggctggtgccagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| Sbjct: 539080 gaggctggtgccagcgcaggtaacgctcagg---acgacgacgatgatgtccctgagctt 539024 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 321 agtgcaagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaaga 379 |||||||||||| || | ||| || ||||||||||||||||| | |||||||| |||| Sbjct: 35518982 agtgcaagcttccatcgccgcaaacacatgggtggtcagtggctccccacagaccaaga 35519040
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 153 bits (77), Expect = 7e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 170 gcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagta 229 |||||||||||||||| || |||||||| || || || |||||||| ||||| || || | Sbjct: 539879 gcaggaagaagaaggcagttcacaagactaccaccactgatgacaagaggcttcaaagca 539820 Query: 230 ccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaagg 289 || ||||||||||||||||||||| ||| |||||||||||||||||||| ||||| |||| Sbjct: 539819 ccttgaaaagagtaggagtgaacaacattcctggtatcgaagaggtcaatatcttcaagg 539760 Query: 290 atgatgtggttattcagtttctgaatcctaaag 322 ||||||||||||| || |||| |||||| |||| Sbjct: 539759 atgatgtggttatccaatttcagaatccaaaag 539727 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||| ||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct: 540365 atgaatgtcgacaagcttaagaagatggcgggtgccgtgcgcaccggtggcaagggcagc 540306 Query: 166 atgcgcagg 174 ||||||||| Sbjct: 540305 atgcgcagg 540297 Score = 69.9 bits (35), Expect = 8e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 172 aggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtacc 231 |||||||||||||| || |||||||| || || || ||||| ||||| ||||| || Sbjct: 35608808 aggaagaagaaggccgtccacaagacggggaccactgacgacaagaggctgcagagcacg 35608867 Query: 232 ctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggat 291 || || |||||||| || ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 35608868 ctcaagagagtaggtgtcaacaccatccccgcgatcgaggaggtcaacatcttcaaggat 35608927 Query: 292 gat 294 ||| Sbjct: 35608928 gat 35608930 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 421 cctgacaacttggacaacctccggaggcttgcagagcaattccaaaagcaggt 473 ||||| ||| ||||||||||| |||||||||| ||||| ||||| |||||||| Sbjct: 539141 cctgataacctggacaacctcaggaggcttgctgagcagttccagaagcaggt 539089 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 321 agtgcaagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaaga 379 ||||||||| || ||||| || ||||||||||| || |||||||| |||||||| |||| Sbjct: 539637 agtgcaagcatccattggtgcaaatacatgggtagtgagtggaacaccacagacgaaga 539579 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/60 (86%), Gaps = 3/60 (5%) Strand = Plus / Minus Query: 496 gaggctggtgccagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| Sbjct: 539078 gaggctggtgccagcgcaggtaacgctcagg---acgacgacgatgatgtccctgagctt 539022 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 321 agtgcaagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaaga 379 |||||||||||| || | ||| || ||||||||||||||||| | |||||||| |||| Sbjct: 35609054 agtgcaagcttccatcgccgcaaacacatgggtggtcagtggctccccacagaccaaga 35609112
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 153 bits (77), Expect = 7e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 170 gcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagta 229 |||||||||||||||| || |||||||| || || || |||||||| ||||| || || | Sbjct: 76037 gcaggaagaagaaggcagttcacaagactaccaccactgatgacaagaggcttcaaagca 76096 Query: 230 ccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaagg 289 || ||||||||||||||||||||| ||| |||||||||||||||||||| ||||| |||| Sbjct: 76097 ccttgaaaagagtaggagtgaacaacattcctggtatcgaagaggtcaatatcttcaagg 76156 Query: 290 atgatgtggttattcagtttctgaatcctaaag 322 ||||||||||||| || |||| |||||| |||| Sbjct: 76157 atgatgtggttatccaatttcagaatccaaaag 76189 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 106 atgaatgtagaaaagctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagc 165 |||||||| || ||||| ||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct: 75551 atgaatgtcgacaagcttaagaagatggcgggtgccgtgcgcaccggtggcaagggcagc 75610 Query: 166 atgcgcagg 174 ||||||||| Sbjct: 75611 atgcgcagg 75619 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 421 cctgacaacttggacaacctccggaggcttgcagagcaattccaaaagcaggt 473 ||||| ||| ||||||||||| |||||||||| ||||| ||||| |||||||| Sbjct: 76775 cctgataacctggacaacctcaggaggcttgctgagcagttccagaagcaggt 76827 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 321 agtgcaagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaaga 379 ||||||||| || ||||| || ||||||||||| || |||||||| |||||||| |||| Sbjct: 76279 agtgcaagcatccattggtgcaaatacatgggtagtgagtggaacaccacagacgaaga 76337 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/60 (86%), Gaps = 3/60 (5%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggtgctgctcaggctgacgacgatgatgatgtccctgagctt 555 |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| Sbjct: 76838 gaggctggtgccagcgcaggtaacgctcagg---acgacgacgatgatgtccctgagctt 76894
>gb|DQ205667.1| Amphicarpaea bracteata BTF3-like protein gene, partial sequence Length = 1065 Score = 151 bits (76), Expect = 3e-33 Identities = 130/148 (87%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 279 aagaagaaggctgtccacaagacgacaaccacagatgacaaaaggcttcagagcaccctg 338 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| |||| ||||| ||||||||| || || |||||||| ||||||||||||||| Sbjct: 339 aagagaataggggtgaatgccatccctgcaattgaggaggtcaatatctttaaggatgat 398 Query: 295 gtggttattcagtttctgaatcctaaag 322 |||||||| |||||||| ||||| |||| Sbjct: 399 gtggttatccagtttctaaatcccaaag 426
>gb|DQ205678.1| Glycine microphylla BTF3-like protein 1 gene, partial sequence Length = 1225 Score = 143 bits (72), Expect = 7e-31 Identities = 129/148 (87%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||| | |||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 317 aagaagaaggctatccacaagacaacaaccacagatgacaaaaggcttcagagcaccctg 376 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| |||| ||||| ||||||||| ||| ||||||||||| |||||||||||||| Sbjct: 377 aagagaataggggtgaatgccatccctgctattgaagaggtcaatatctttaaggatgac 436 Query: 295 gtggttattcagtttctgaatcctaaag 322 || ||||| |||||||| ||||| |||| Sbjct: 437 gtagttatccagtttctaaatcccaaag 464
>gb|BT016308.1| Zea mays clone Contig141 mRNA sequence Length = 783 Score = 139 bits (70), Expect = 1e-29 Identities = 211/258 (81%) Strand = Plus / Plus Query: 120 gctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagcatgcgcaggaagaa 179 ||||| ||| ||||| || ||||| |||||||| || ||||| | ||||||||||||||| Sbjct: 44 gctcatgaagatggccggcgccgtccgcaccggcggcaagggcaccatgcgcaggaagaa 103 Query: 180 gaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctgaaaag 239 |||||||||||||||||| || || || ||||| ||||| ||| | || || || || Sbjct: 104 gaaggctgtacacaagacggtcaccacggacgacaagaggctgcagggcactctcaagag 163 Query: 240 agtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgatgtggt 299 |||||| || ||||||||||||| ||||| ||||| ||||| || ||||| ||| | || Sbjct: 164 agtaggggtcaacaccatccctgcaatcgaggaggtgaacatattcaaggacgatctcgt 223 Query: 300 tattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtggtcag 359 || ||||| |||| || |||||||||||||| || | || || |||||||||||||| Sbjct: 224 catccagttcttgaaccccaaagtgcaagcttccatcgcagcaaacacatgggtggtcag 283 Query: 360 tggaactccacagacaaa 377 |||| ||||||||||||| Sbjct: 284 tggatctccacagacaaa 301
>ref|NM_105982.1| Arabidopsis thaliana unknown protein AT1G73230 mRNA, complete cds Length = 819 Score = 133 bits (67), Expect = 7e-28 Identities = 237/291 (81%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| ||||||||||| || || |||||||| ||||||||||| || || Sbjct: 193 aagaagaaggctgttcacaagaccactacaaccgatgacaagaggctccagagcactctt 252 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||||| ||||| || |||| || | || ||||| || ||||| |||||||||||| Sbjct: 253 aagagagttggagtcaattccattcccgccattgaagaagttaacatttttaaggatgat 312 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || || |||||||| | || |||||||| ||||||||||||| ||||| |||||||| Sbjct: 313 gtagtcattcagttcattaaccctaaagttcaagcttcaattgctgctaacacatgggtt 372 Query: 355 gtcagtggaactccacagacaaagaaactgcaagatctgctgccatca-attatcaatca 413 || ||||| || |||||||| || ||| ||||||| | || || ||| ||||||| || Sbjct: 373 gtgagtggtacaccacagacgaaaaaattgcaagacattcttcc-tcagattatcagcca 431 Query: 414 acttggtcctgacaacttggacaacctccggaggcttgcagagcaattcca 464 |||||| || || |||||||||||||| || ||| |||||||||||||| Sbjct: 432 acttggaccagataacttggacaacctgaagaagctagcagagcaattcca 482
>gb|AY063069.1| Arabidopsis thaliana putative RNA polymerase B transcription factor 3 (At1g73230) mRNA, complete cds Length = 529 Score = 133 bits (67), Expect = 7e-28 Identities = 237/291 (81%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| ||||||||||| || || |||||||| ||||||||||| || || Sbjct: 70 aagaagaaggctgttcacaagaccactacaaccgatgacaagaggctccagagcactctt 129 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||||| ||||| || |||| || | || ||||| || ||||| |||||||||||| Sbjct: 130 aagagagttggagtcaattccattcccgccattgaagaagttaacatttttaaggatgat 189 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || || |||||||| | || |||||||| ||||||||||||| ||||| |||||||| Sbjct: 190 gtagtcattcagttcattaaccctaaagttcaagcttcaattgctgctaacacatgggtt 249 Query: 355 gtcagtggaactccacagacaaagaaactgcaagatctgctgccatca-attatcaatca 413 || ||||| || |||||||| || ||| ||||||| | || || ||| ||||||| || Sbjct: 250 gtgagtggtacaccacagacgaaaaaattgcaagacattcttcc-tcagattatcagcca 308 Query: 414 acttggtcctgacaacttggacaacctccggaggcttgcagagcaattcca 464 |||||| || || |||||||||||||| || ||| |||||||||||||| Sbjct: 309 acttggaccagataacttggacaacctgaagaagctagcagagcaattcca 359
>gb|AF370253.1| Arabidopsis thaliana putative RNA polymerase B transcription factor BTF3 (At1g73230) mRNA, complete cds Length = 875 Score = 133 bits (67), Expect = 7e-28 Identities = 237/291 (81%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| ||||||||||| || || |||||||| ||||||||||| || || Sbjct: 156 aagaagaaggctgttcacaagaccactacaaccgatgacaagaggctccagagcactctt 215 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||||| ||||| || |||| || | || ||||| || ||||| |||||||||||| Sbjct: 216 aagagagttggagtcaattccattcccgccattgaagaagttaacatttttaaggatgat 275 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || || |||||||| | || |||||||| ||||||||||||| ||||| |||||||| Sbjct: 276 gtagtcattcagttcattaaccctaaagttcaagcttcaattgctgctaacacatgggtt 335 Query: 355 gtcagtggaactccacagacaaagaaactgcaagatctgctgccatca-attatcaatca 413 || ||||| || |||||||| || ||| ||||||| | || || ||| ||||||| || Sbjct: 336 gtgagtggtacaccacagacgaaaaaattgcaagacattcttcc-tcagattatcagcca 394 Query: 414 acttggtcctgacaacttggacaacctccggaggcttgcagagcaattcca 464 |||||| || || |||||||||||||| || ||| |||||||||||||| Sbjct: 395 acttggaccagataacttggacaacctgaagaagctagcagagcaattcca 445
>gb|AY084841.1| Arabidopsis thaliana clone 119220 mRNA, complete sequence Length = 819 Score = 133 bits (67), Expect = 7e-28 Identities = 237/291 (81%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| ||||||||||| || || |||||||| ||||||||||| || || Sbjct: 193 aagaagaaggctgttcacaagaccactacaaccgatgacaagaggctccagagcactctt 252 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||||| ||||| || |||| || | || ||||| || ||||| |||||||||||| Sbjct: 253 aagagagttggagtcaattccattcccgccattgaagaagttaacatttttaaggatgat 312 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || || |||||||| | || |||||||| ||||||||||||| ||||| |||||||| Sbjct: 313 gtagtcattcagttcattaaccctaaagttcaagcttcaattgctgctaacacatgggtt 372 Query: 355 gtcagtggaactccacagacaaagaaactgcaagatctgctgccatca-attatcaatca 413 || ||||| || |||||||| || ||| ||||||| | || || ||| ||||||| || Sbjct: 373 gtgagtggtacaccacagacgaaaaaattgcaagacattcttcc-tcagattatcagcca 431 Query: 414 acttggtcctgacaacttggacaacctccggaggcttgcagagcaattcca 464 |||||| || || |||||||||||||| || ||| |||||||||||||| Sbjct: 432 acttggaccagataacttggacaacctgaagaagctagcagagcaattcca 482
>gb|AY105061.1| Zea mays PCO096106 mRNA sequence Length = 902 Score = 133 bits (67), Expect = 7e-28 Identities = 208/255 (81%) Strand = Plus / Plus Query: 120 gctcaagaaaatggcaggtgccgtgcgcaccggggggaagggtagcatgcgcaggaagaa 179 ||||| ||| ||||| || ||||| |||||||| || ||||| | ||||||||||||||| Sbjct: 162 gctcatgaagatggccggcgccgtccgcaccggcggcaagggcaccatgcgcaggaagaa 221 Query: 180 gaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctgaaaag 239 |||||||||||||||||| || || || ||||| ||||| ||| | || || || || Sbjct: 222 gaaggctgtacacaagacggtcaccacggacgacaagaggctgcagggcactctcaagag 281 Query: 240 agtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgatgtggt 299 |||||| || ||||||||||||| ||||| ||||| ||||| || ||||| ||| | || Sbjct: 282 agtaggggtcaacaccatccctgcaatcgaggaggtgaacatattcaaggacgatctcgt 341 Query: 300 tattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtggtcag 359 || ||||| |||| || |||||||||||||| || | || || |||||||||||||| Sbjct: 342 catccagttcttgaaccccaaagtgcaagcttccatcgcagcaaacacatgggtggtcag 401 Query: 360 tggaactccacagac 374 |||| |||||||||| Sbjct: 402 tggatctccacagac 416
>ref|XM_470416.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 129 bits (65), Expect = 1e-26 Identities = 212/261 (81%) Strand = Plus / Plus Query: 130 atggcaggtgccgtgcgcaccggggggaagggtagcatgcgcaggaagaagaaggctgta 189 ||||| || ||||| |||||||| ||||| || | | ||||||||||||||||||| || Sbjct: 121 atggccggcgccgtccgcaccggcgggaaaggcaccgtgcgcaggaagaagaaggccgtc 180 Query: 190 cacaagaccacaactacagatgacaaaaggctccagagtaccctgaaaagagtaggagtg 249 |||||||| || || || ||||| ||||| ||||| || || || |||||||| || Sbjct: 181 cacaagacggggaccactgacgacaagaggctgcagagcacgctcaagagagtaggtgtc 240 Query: 250 aacaccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagttt 309 ||||||||||| | ||||| |||||||||||||| ||||||||| | || || ||||| Sbjct: 241 aacaccatccccgcgatcgaggaggtcaacatcttcaaggatgatctcgtcatccagttc 300 Query: 310 ctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtggtcagtggaactcca 369 | ||||| |||||||||||||| || | ||| || ||||||||||||||||| | ||| Sbjct: 301 gtcaatcccaaagtgcaagcttccatcgccgcaaacacatgggtggtcagtggctcccca 360 Query: 370 cagacaaagaaactgcaagat 390 ||||| ||||| || |||||| Sbjct: 361 cagaccaagaagcttcaagat 381
>dbj|AK104157.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C10, full insert sequence Length = 903 Score = 129 bits (65), Expect = 1e-26 Identities = 212/261 (81%) Strand = Plus / Plus Query: 130 atggcaggtgccgtgcgcaccggggggaagggtagcatgcgcaggaagaagaaggctgta 189 ||||| || ||||| |||||||| ||||| || | | ||||||||||||||||||| || Sbjct: 98 atggccggcgccgtccgcaccggcgggaaaggcaccgtgcgcaggaagaagaaggccgtc 157 Query: 190 cacaagaccacaactacagatgacaaaaggctccagagtaccctgaaaagagtaggagtg 249 |||||||| || || || ||||| ||||| ||||| || || || |||||||| || Sbjct: 158 cacaagacggggaccactgacgacaagaggctgcagagcacgctcaagagagtaggtgtc 217 Query: 250 aacaccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagttt 309 ||||||||||| | ||||| |||||||||||||| ||||||||| | || || ||||| Sbjct: 218 aacaccatccccgcgatcgaggaggtcaacatcttcaaggatgatctcgtcatccagttc 277 Query: 310 ctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtggtcagtggaactcca 369 | ||||| |||||||||||||| || | ||| || ||||||||||||||||| | ||| Sbjct: 278 gtcaatcccaaagtgcaagcttccatcgccgcaaacacatgggtggtcagtggctcccca 337 Query: 370 cagacaaagaaactgcaagat 390 ||||| ||||| || |||||| Sbjct: 338 cagaccaagaagcttcaagat 358
>dbj|AK102202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087F19, full insert sequence Length = 804 Score = 129 bits (65), Expect = 1e-26 Identities = 212/261 (81%) Strand = Plus / Plus Query: 130 atggcaggtgccgtgcgcaccggggggaagggtagcatgcgcaggaagaagaaggctgta 189 ||||| || ||||| |||||||| ||||| || | | ||||||||||||||||||| || Sbjct: 114 atggccggcgccgtccgcaccggcgggaaaggcaccgtgcgcaggaagaagaaggccgtc 173 Query: 190 cacaagaccacaactacagatgacaaaaggctccagagtaccctgaaaagagtaggagtg 249 |||||||| || || || ||||| ||||| ||||| || || || |||||||| || Sbjct: 174 cacaagacggggaccactgacgacaagaggctgcagagcacgctcaagagagtaggtgtc 233 Query: 250 aacaccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagttt 309 ||||||||||| | ||||| |||||||||||||| ||||||||| | || || ||||| Sbjct: 234 aacaccatccccgcgatcgaggaggtcaacatcttcaaggatgatctcgtcatccagttc 293 Query: 310 ctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtggtcagtggaactcca 369 | ||||| |||||||||||||| || | ||| || ||||||||||||||||| | ||| Sbjct: 294 gtcaatcccaaagtgcaagcttccatcgccgcaaacacatgggtggtcagtggctcccca 353 Query: 370 cagacaaagaaactgcaagat 390 ||||| ||||| || |||||| Sbjct: 354 cagaccaagaagcttcaagat 374
>dbj|AK060496.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F11, full insert sequence Length = 944 Score = 129 bits (65), Expect = 1e-26 Identities = 212/261 (81%) Strand = Plus / Plus Query: 130 atggcaggtgccgtgcgcaccggggggaagggtagcatgcgcaggaagaagaaggctgta 189 ||||| || ||||| |||||||| ||||| || | | ||||||||||||||||||| || Sbjct: 139 atggccggcgccgtccgcaccggcgggaaaggcaccgtgcgcaggaagaagaaggccgtc 198 Query: 190 cacaagaccacaactacagatgacaaaaggctccagagtaccctgaaaagagtaggagtg 249 |||||||| || || || ||||| ||||| ||||| || || || |||||||| || Sbjct: 199 cacaagacggggaccactgacgacaagaggctgcagagcacgctcaagagagtaggtgtc 258 Query: 250 aacaccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagttt 309 ||||||||||| | ||||| |||||||||||||| ||||||||| | || || ||||| Sbjct: 259 aacaccatccccgcgatcgaggaggtcaacatcttcaaggatgatctcgtcatccagttc 318 Query: 310 ctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtggtcagtggaactcca 369 | ||||| |||||||||||||| || | ||| || ||||||||||||||||| | ||| Sbjct: 319 gtcaatcccaaagtgcaagcttccatcgccgcaaacacatgggtggtcagtggctcccca 378 Query: 370 cagacaaagaaactgcaagat 390 ||||| ||||| || |||||| Sbjct: 379 cagaccaagaagcttcaagat 399
>gb|DQ205669.1| Glycine soja BTF3-like protein 2B gene, partial sequence Length = 1065 Score = 127 bits (64), Expect = 4e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||| | |||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 308 aagaagaaggctatccacaagacaacaaccacagatgacaaaaggcttcagagcaccctg 367 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| |||| ||||| ||||||| | ||| || |||||||| |||||||||||||| Sbjct: 368 aagagaataggggtgaatgccatcccggctattgaggaggtcaatatctttaaggatgac 427 Query: 295 gtggttattcagtttctgaatcctaaag 322 || ||||| |||||||| ||||| |||| Sbjct: 428 gtagttatccagtttctaaatcccaaag 455
>gb|DQ241859.1| Solanum tuberosum clone 021D03 putative transcription factor BTF3-like mRNA, complete cds Length = 676 Score = 115 bits (58), Expect = 2e-22 Identities = 187/230 (81%) Strand = Plus / Plus Query: 157 aagggtagcatgcgcaggaagaagaaggctgtacacaagaccacaactacagatgacaaa 216 ||||||| |||| | || ||||||||||| ||||||||||| || || || ||||||||| Sbjct: 81 aagggtaccatgagaagaaagaagaaggccgtacacaagacaactacaaccgatgacaaa 140 Query: 217 aggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtc 276 || || ||||| ||| |||||||| |||| || || |||| |||| ||| ||||| ||| Sbjct: 141 agactacagagcaccttgaaaagaataggtgtcaatgccattcctgctattgaagaagtc 200 Query: 277 aacatctttaaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaatt 336 |||||||| ||||| ||||| ||||| || || | || || ||||| ||||| |||||| Sbjct: 201 aacatcttcaaggaggatgttgttatccaattcgttaaccccaaagttcaagcatcaatt 260 Query: 337 ggcgctaatacatgggtggtcagtggaactccacagacaaagaaactgca 386 | || || |||||||| || ||||| ||||| |||||||||||| |||| Sbjct: 261 gctgcaaacacatgggttgttagtggtactccccagacaaagaaattgca 310
>emb|AJ580824.1|LCO580824 Lotus corniculatus var. japonicus har1 gene and genes for transcription factor homolog BTF3-like protein, S-receptor kinase-like protein 1, S-receptor kinase-like protein 2, S-receptor kinase-like protein 3 and SAR DNA-binding protein-like protein Length = 46304 Score = 113 bits (57), Expect = 6e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||| ||||| || ||||| |||||||| ||||| |||||| Sbjct: 6574 aagaagaaggctgttcacaagacaacaaccaccgatgataaaaggctacagagcaccctg 6633 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| |||| ||||| ||||||| | || || |||||||||||||| ||||||||| Sbjct: 6634 aagagaataggggtgaatgccatccccgcaattgaggaggtcaacatcttcaaggatgat 6693 Query: 295 gtggttattcagtttct 311 || ||||| |||||||| Sbjct: 6694 gtagttatccagtttct 6710
>dbj|AP005667.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258c, complete sequence Length = 38809 Score = 113 bits (57), Expect = 6e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||| ||||| || ||||| |||||||| ||||| |||||| Sbjct: 8360 aagaagaaggctgttcacaagacaacaaccaccgatgataaaaggctacagagcaccctg 8419 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| |||| ||||| ||||||| | || || |||||||||||||| ||||||||| Sbjct: 8420 aagagaataggggtgaatgccatccccgcaattgaggaggtcaacatcttcaaggatgat 8479 Query: 295 gtggttattcagtttct 311 || ||||| |||||||| Sbjct: 8480 gtagttatccagtttct 8496
>dbj|AB092809.1| Lotus japonicus HAR1 gene for LRR receptor-like kinase, hypothetical proteins, complete and partial cds, clone:BAC259.12D-2 Length = 39462 Score = 113 bits (57), Expect = 6e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||| ||||| || ||||| |||||||| ||||| |||||| Sbjct: 8261 aagaagaaggctgttcacaagacaacaaccaccgatgataaaaggctacagagcaccctg 8320 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| |||| ||||| ||||||| | || || |||||||||||||| ||||||||| Sbjct: 8321 aagagaataggggtgaatgccatccccgcaattgaggaggtcaacatcttcaaggatgat 8380 Query: 295 gtggttattcagtttct 311 || ||||| |||||||| Sbjct: 8381 gtagttatccagtttct 8397
>gb|AY084522.1| Arabidopsis thaliana clone 1105 mRNA, complete sequence Length = 604 Score = 111 bits (56), Expect = 2e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||||| || || |||||||| ||||||||||| || || Sbjct: 158 aagaagaaggctgtgcacaagaccaatacaactgatgacaagaggctccagagcacactt 217 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| | ||||| ||| |||| || | ||| ||||| || |||||||||||||||||| Sbjct: 218 aagagaattggagttaactccattcccgctattgaagaagttaacatctttaaggatgat 277 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || ||||||||||| | || ||||| || ||||||||||||| || || |||||||| Sbjct: 278 gttgttattcagttcatcaaccctaaggttcaagcttcaattgctgcaaacacatgggtt 337 Query: 355 gtcagtggaactccacagacaaagaaactgcaagat 390 || || || |||| ||||| || ||| |||||||| Sbjct: 338 gttagcggttctcctcagaccaaaaaattgcaagat 373
>emb|AJ242970.1|ATH242970 Arabidopsis thaliana mRNA for BTF3b-like factor Length = 630 Score = 111 bits (56), Expect = 2e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||||| || || |||||||| ||||||||||| || || Sbjct: 124 aagaagaaggctgtgcacaagaccaatacaactgatgacaagaggctccagagcacactt 183 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| | ||||| ||| |||| || | ||| ||||| || |||||||||||||||||| Sbjct: 184 aagagaattggagttaactccattcccgctattgaagaagttaacatctttaaggatgat 243 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || ||||||||||| | || ||||| || ||||||||||||| || || |||||||| Sbjct: 244 gttgttattcagttcatcaaccctaaggttcaagcttcaattgctgcaaacacatgggtt 303 Query: 355 gtcagtggaactccacagacaaagaaactgcaagat 390 || || || |||| ||||| || ||| |||||||| Sbjct: 304 gttagcggttctcctcagaccaaaaaattgcaagat 339
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 107 bits (54), Expect = 4e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 ||||||||||| || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 84915 aagaagaaggccgtccacaagacaacaactacagatgacaaaaggcttcagagcaccctg 84974 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| |||| ||||| ||||||| || || |||||||| ||||| ||||||||| Sbjct: 84975 aagagaataggggtgaatgccatcccacaaattgaggaggtcaatatcttcaaggatgat 85034 Query: 295 gtggttattcagtt 308 || ||||| ||||| Sbjct: 85035 gtagttatccagtt 85048
>gb|DQ205676.1| Glycine canescens BTF3-like protein 2B gene, partial sequence Length = 741 Score = 103 bits (52), Expect = 6e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 211 gacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatcgaa 270 ||||||||||| ||||| |||||||| ||| |||| ||||| ||||||||| |||||| Sbjct: 1 gacaaaaggcttcagagcaccctgaagagaataggggtgaatgccatccctgctatcgag 60 Query: 271 gaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaag 322 |||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 61 gaggtcaatatctttaaggatgacgtagttatccagtttctaaatcccaaag 112
>gb|DQ205677.1| Teramnus labialis BTF3-like protein 2 gene, partial sequence Length = 916 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 210 tgacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatcga 269 |||||||||||| ||||| |||||||| ||| |||||||||| ||||||||| || || Sbjct: 2 tgacaaaaggcttcagagcaccctgaagagaataggagtgaatgccatccctgcaattga 61 Query: 270 agaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaag 322 |||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 62 ggaggtcaatatctttaaggatgacgtagttatccagtttctaaatcccaaag 114
>ref|NM_101651.2| Arabidopsis thaliana transcription factor AT1G17880 mRNA, complete cds Length = 731 Score = 95.6 bits (48), Expect = 1e-16 Identities = 174/216 (80%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||||| || || |||||||| ||||| || || || || Sbjct: 158 aagaagaaggctgtgcacaagaccaatacaactgatgacaagaggcttcaaagcactctt 217 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| | ||||| ||| |||| || | ||| ||||| || |||||||||||||||||| Sbjct: 218 aagagaattggagttaactccattcccgctattgaagaagttaacatctttaaggatgat 277 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || ||||||||||| | || ||||| || ||||||||||||| || || |||||||| Sbjct: 278 gttgttattcagttcatcaaccctaaggttcaagcttcaattgctgcaaacacatgggtt 337 Query: 355 gtcagtggaactccacagacaaagaaactgcaagat 390 || || || |||| ||||| || ||| |||||||| Sbjct: 338 gttagcggttctcctcagaccaaaaaattgcaagat 373
>gb|DQ205675.1| Glycine canescens BTF3-like protein 1 gene, partial sequence Length = 892 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 211 gacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatcgaa 270 ||||||||||| ||||| ||||| || ||| |||| ||||| ||||||||| ||| ||| Sbjct: 1 gacaaaaggcttcagagcaccctaaagagaataggggtgaatgccatccctgctattgaa 60 Query: 271 gaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaag 322 ||||| || ||||||||||||||||| ||||| |||||||| ||||| |||| Sbjct: 61 gaggttaatatctttaaggatgatgtagttatccagtttctaaatcccaaag 112
>gb|DQ205674.1| Glycine canescens BTF3-like protein 2A gene, partial sequence Length = 948 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 211 gacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatcgaa 270 ||||||||||| ||||| ||||| || ||| |||| ||||| ||||||||| |||||| Sbjct: 1 gacaaaaggcttcagagcacccttaagagaataggggtgaatgccatccctgctatcgag 60 Query: 271 gaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaag 322 |||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 61 gaggtcaatatctttaaggatgacgtagttatccagtttctaaatcccaaag 112
>gb|AF332407.1| Arabidopsis thaliana putative transcription factor (At1g17880) mRNA, complete cds Length = 498 Score = 95.6 bits (48), Expect = 1e-16 Identities = 174/216 (80%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||||| || || |||||||| ||||| || || || || Sbjct: 70 aagaagaaggctgtgcacaagaccaatacaactgatgacaagaggcttcaaagcactctt 129 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| | ||||| ||| |||| || | ||| ||||| || |||||||||||||||||| Sbjct: 130 aagagaattggagttaactccattcccgctattgaagaagttaacatctttaaggatgat 189 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || ||||||||||| | || ||||| || ||||||||||||| || || |||||||| Sbjct: 190 gttgttattcagttcatcaaccctaaggttcaagcttcaattgctgcaaacacatgggtt 249 Query: 355 gtcagtggaactccacagacaaagaaactgcaagat 390 || || || |||| ||||| || ||| |||||||| Sbjct: 250 gttagcggttctcctcagaccaaaaaattgcaagat 285
>gb|AY079361.1| Arabidopsis thaliana putative transcription factor (At1g17880) mRNA, complete cds Length = 529 Score = 95.6 bits (48), Expect = 1e-16 Identities = 174/216 (80%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||||| || || |||||||| ||||| || || || || Sbjct: 70 aagaagaaggctgtgcacaagaccaatacaactgatgacaagaggcttcaaagcactctt 129 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| | ||||| ||| |||| || | ||| ||||| || |||||||||||||||||| Sbjct: 130 aagagaattggagttaactccattcccgctattgaagaagttaacatctttaaggatgat 189 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || ||||||||||| | || ||||| || ||||||||||||| || || |||||||| Sbjct: 190 gttgttattcagttcatcaaccctaaggttcaagcttcaattgctgcaaacacatgggtt 249 Query: 355 gtcagtggaactccacagacaaagaaactgcaagat 390 || || || |||| ||||| || ||| |||||||| Sbjct: 250 gttagcggttctcctcagaccaaaaaattgcaagat 285
>gb|AY045793.1| Arabidopsis thaliana putative transcription factor (At1g17880) mRNA, complete cds Length = 740 Score = 95.6 bits (48), Expect = 1e-16 Identities = 174/216 (80%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||||| || || |||||||| ||||| || || || || Sbjct: 156 aagaagaaggctgtgcacaagaccaatacaactgatgacaagaggcttcaaagcactctt 215 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| | ||||| ||| |||| || | ||| ||||| || |||||||||||||||||| Sbjct: 216 aagagaattggagttaactccattcccgctattgaagaagttaacatctttaaggatgat 275 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || ||||||||||| | || ||||| || ||||||||||||| || || |||||||| Sbjct: 276 gttgttattcagttcatcaaccctaaggttcaagcttcaattgctgcaaacacatgggtt 335 Query: 355 gtcagtggaactccacagacaaagaaactgcaagat 390 || || || |||| ||||| || ||| |||||||| Sbjct: 336 gttagcggttctcctcagaccaaaaaattgcaagat 371
>gb|DQ205673.1| Pseudovigna argentea BTF3-like protein gene, partial sequence Length = 709 Score = 89.7 bits (45), Expect = 9e-15 Identities = 96/113 (84%) Strand = Plus / Plus Query: 210 tgacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatcga 269 |||||||||||| ||||| |||||||| ||| |||| ||||| ||||||||| || || Sbjct: 2 tgacaaaaggcttcagagcaccctgaagagaataggggtgaatgccatccctgcaattga 61 Query: 270 agaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaag 322 |||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 62 ggaggtcaatatctttaaggatgacgtagttatccagtttctaaatcccaaag 114
>gb|AY057667.1| Arabidopsis thaliana At1g17880/F2H15_10 mRNA, complete cds Length = 728 Score = 87.7 bits (44), Expect = 4e-14 Identities = 173/216 (80%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| |||||||||| || || |||||||| ||||| || || || || Sbjct: 158 aagaagaaggctgtgcacaagaccaatacaactgatgacaagaggcttcaaagcactctt 217 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||| | ||||| ||| |||| || ||| ||||| || |||||||||||||||||| Sbjct: 218 aagagaattggagttaactccattccccctattgaagaagttaacatctttaaggatgat 277 Query: 295 gtggttattcagtttctgaatcctaaagtgcaagcttcaattggcgctaatacatgggtg 354 || ||||||||||| | || ||||| || ||||||||||||| || || |||||||| Sbjct: 278 gttgttattcagttcatcaaccctaaggttcaagcttcaattgctgcaaacacatgggtt 337 Query: 355 gtcagtggaactccacagacaaagaaactgcaagat 390 || || || |||| ||||| || ||| |||||||| Sbjct: 338 gttagcggttctcctcagaccaaaaaattgcaagat 373
>gb|BT013353.1| Lycopersicon esculentum clone 135313R, mRNA sequence Length = 701 Score = 85.7 bits (43), Expect = 1e-13 Identities = 190/239 (79%) Strand = Plus / Plus Query: 148 accggggggaagggtagcatgcgcaggaagaagaaggctgtacacaagaccacaactaca 207 ||||| || ||||||| |||| | || ||||||||||| ||||||||||| || || || Sbjct: 97 accggtggaaagggtaccatgagaagaaagaagaaggccgtacacaagacaactacaact 156 Query: 208 gatgacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatc 267 || |||||||| || ||||| ||| |||||||| |||| || || ||| |||| || Sbjct: 157 gacgacaaaagactacagagcaccttgaaaagaataggtgtcaatggcattcctgccatt 216 Query: 268 gaagaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaagtgcaa 327 ||||| |||||||| || ||||| ||||| ||||| || || | || || ||||| ||| Sbjct: 217 gaagaagtcaacattttcaaggaggatgttgttatccaattcgttaaccccaaagttcaa 276 Query: 328 gcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaagaaactgca 386 || ||||||| || || |||||||| || ||||| ||||| |||||||||||| |||| Sbjct: 277 gcatcaattgctgcaaacacatgggttgttagtggtactccccagacaaagaaattgca 335
>gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thaliana chromosome 1, complete sequence Length = 75133 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 170 gcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagta 229 |||| |||||||||||||| |||||||||| || || |||||||| ||||| || || | Sbjct: 34283 gcagaaagaagaaggctgtgcacaagaccaatacaactgatgacaagaggcttcaaagca 34224 Query: 230 ccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaagg 289 | || || ||| | ||||| ||| |||| || | ||| ||||| || ||||||||||||| Sbjct: 34223 ctcttaagagaattggagttaactccattcccgctattgaagaagttaacatctttaagg 34164 Query: 290 atgatgtggttattcagtt 308 ||||||| ||||||||||| Sbjct: 34163 atgatgttgttattcagtt 34145
>gb|DQ307490.1| Lycopersicon esculentum BTF3-like transcription factor (BTF3) mRNA, complete cds Length = 711 Score = 85.7 bits (43), Expect = 1e-13 Identities = 190/239 (79%) Strand = Plus / Plus Query: 148 accggggggaagggtagcatgcgcaggaagaagaaggctgtacacaagaccacaactaca 207 ||||| || ||||||| |||| | || ||||||||||| ||||||||||| || || || Sbjct: 106 accggtggaaagggtaccatgagaagaaagaagaaggccgtacacaagacaactacaact 165 Query: 208 gatgacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatc 267 || |||||||| || ||||| ||| |||||||| |||| || || ||| |||| || Sbjct: 166 gacgacaaaagactacagagcaccttgaaaagaataggtgtcaatggcattcctgccatt 225 Query: 268 gaagaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaagtgcaa 327 ||||| |||||||| || ||||| ||||| ||||| || || | || || ||||| ||| Sbjct: 226 gaagaagtcaacattttcaaggaggatgttgttatccaattcgttaaccccaaagttcaa 285 Query: 328 gcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaagaaactgca 386 || ||||||| || || |||||||| || ||||| ||||| |||||||||||| |||| Sbjct: 286 gcatcaattgctgcaaacacatgggttgttagtggtactccccagacaaagaaattgca 344
>gb|AC010556.6|AC010556 Arabidopsis thaliana chromosome 1 BAC T18K17 genomic sequence, complete sequence Length = 70836 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 175 aagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtaccctg 234 |||||||||||||| ||||||||||| || || |||||||| ||||||||||| || || Sbjct: 26498 aagaagaaggctgttcacaagaccactacaaccgatgacaagaggctccagagcactctt 26557 Query: 235 aaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggatgat 294 || ||||| ||||| || |||| || | || ||||| || ||||| |||||||||||| Sbjct: 26558 aagagagttggagtcaattccattcccgccattgaagaagttaacatttttaaggatgat 26617 Query: 295 gtggttattcagtt 308 || || |||||||| Sbjct: 26618 gtagtcattcagtt 26631 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 325 caagcttcaattggcgctaatacatgggtggtcagtggaactccacagac 374 ||||||||||||| ||||| |||||||| || ||||| || |||||||| Sbjct: 26747 caagcttcaattgctgctaacacatgggttgtgagtggtacaccacagac 26796
>gb|AC172859.1| Brassica rapa subsp. pekinensis clone KBrB023K01, complete sequence Length = 102061 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 172 aggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtacc 231 ||||||||||||||||| |||||||||| || || |||||||| | |||||| || ||| Sbjct: 95800 aggaagaagaaggctgtgcacaagaccaatacaactgatgacaagaagctccaaagcacc 95741 Query: 232 ctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggat 291 || || || | ||||| || |||| || | ||| ||||| || ||||||||||||||| Sbjct: 95740 ctcaagaggattggagttaattccattccagctattgaagaagttaacatctttaaggat 95681 Query: 292 gatgtggttattcagtt 308 ||||| ||||||||||| Sbjct: 95680 gatgttgttattcagtt 95664
>emb|Y09106.1|NPY09106 N.plumbaginifolia mRNA for BTF3-like transcription factor Length = 664 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 165 catgcgcaggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctcca 224 |||||| || ||||||||||| || |||||||| || || ||||||||||| || || || Sbjct: 98 catgcgaagaaagaagaaggcagttcacaagacaactacaacagatgacaagagacttca 157 Query: 225 gagtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctt 284 || ||||| |||||| |||| ||||| | || |||| ||| |||||||| ||||| || Sbjct: 158 aagcaccctcaaaagaataggggtgaatgctattcctgctattgaagaggttaacatttt 217 Query: 285 taaggatgatgtggttat 302 |||||| ||||| ||||| Sbjct: 218 taaggaggatgtagttat 235
>gb|DQ205671.1| Glycine soja clone 16 BTF3-like protein 2A gene, partial sequence Length = 868 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 254 ccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagtttctga 313 ||||||||| ||| ||||||||||| |||||||||||||| || ||||| |||||||| | Sbjct: 4 ccatccctgctattgaagaggtcaatatctttaaggatgacgtagttatccagtttctaa 63 Query: 314 atcctaaag 322 |||| |||| Sbjct: 64 atcccaaag 72
>gb|DQ205672.1| Teramnus uncinatus BTF3-like protein gene, partial sequence Length = 898 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 223 cagagtaccctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatc 282 ||||| |||||||| ||| |||| ||||| ||||||||| || || |||||||| ||| Sbjct: 1 cagagcaccctgaagagaataggggtgaatgccatccctgcaattgaggaggtcaatatc 60 Query: 283 tttaaggatgatgtggttattcagtttctgaatcctaaag 322 ||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 61 tttaaggatgacgtagttatccagtttctaaatcccaaag 100
>gb|DQ447646.1| Nicotiana benthamiana BTF3 mRNA, complete cds Length = 483 Score = 69.9 bits (35), Expect = 8e-09 Identities = 188/239 (78%) Strand = Plus / Plus Query: 148 accggggggaagggtagcatgcgcaggaagaagaaggctgtacacaagaccacaactaca 207 ||||| || ||||||| |||| | || |||||||| || || ||||| || || || || Sbjct: 43 accggtggaaagggtaccatgagaagaaagaagaaagccgttcacaaaacaactacaacc 102 Query: 208 gatgacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggtatc 267 ||||||||||| || ||||| ||| |||||||| |||| || || |||| |||| ||| Sbjct: 103 gatgacaaaagactacagagcaccttgaaaagaataggtgtcaatgccattcctgctatt 162 Query: 268 gaagaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaagtgcaa 327 ||||| |||||||| || ||||| ||||| ||||| || || | ||||| ||||| ||| Sbjct: 163 gaagaagtcaacattttcaaggaggatgttgttatccaattcattaatcccaaagttcaa 222 Query: 328 gcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaagaaactgca 386 || || |||| || || |||||||| || ||||| | || |||||||||||| |||| Sbjct: 223 gcatctattgctgcaaacacatgggttgttagtggttccccccagacaaagaaattgca 281
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 69.9 bits (35), Expect = 8e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 172 aggaagaagaaggctgtacacaagaccacaactacagatgacaaaaggctccagagtacc 231 |||||||||||||| || |||||||| || || || ||||| ||||| ||||| || Sbjct: 51699 aggaagaagaaggccgtccacaagacggggaccactgacgacaagaggctgcagagcacg 51758 Query: 232 ctgaaaagagtaggagtgaacaccatccctggtatcgaagaggtcaacatctttaaggat 291 || || |||||||| || ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 51759 ctcaagagagtaggtgtcaacaccatccccgcgatcgaggaggtcaacatcttcaaggat 51818 Query: 292 gat 294 ||| Sbjct: 51819 gat 51821 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 321 agtgcaagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaaga 379 |||||||||||| || | ||| || ||||||||||||||||| | |||||||| |||| Sbjct: 51945 agtgcaagcttccatcgccgcaaacacatgggtggtcagtggctccccacagaccaaga 52003
>gb|DQ205665.1| Glycine cyrtoloba BTF3-like protein 2B gene, partial sequence Length = 652 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 254 ccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagtttctga 313 ||||||||| ||| || |||||||| |||||||||||||| || ||||| |||||||| | Sbjct: 4 ccatccctgctattgaggaggtcaatatctttaaggatgacgtagttatccagtttctaa 63 Query: 314 atcctaaag 322 |||| |||| Sbjct: 64 atcccaaag 72
>gb|DQ205661.1| Glycine microphylla BTF3-like protein 2B gene, partial sequence Length = 664 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 254 ccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagtttctga 313 ||||||||| ||| || |||||||| |||||||||||||| || ||||| |||||||| | Sbjct: 4 ccatccctgctattgaggaggtcaatatctttaaggatgacgtagttatccagtttctaa 63 Query: 314 atcctaaag 322 |||| |||| Sbjct: 64 atcccaaag 72
>gb|DQ205670.1| Glycine soja clone 2 BTF3-like protein 2A gene, partial sequence Length = 868 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 254 ccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagtttctga 313 ||||||| | ||| || |||||||| |||||||||||||| || ||||| |||||||| | Sbjct: 4 ccatcccggctattgaggaggtcaatatctttaaggatgacgtagttatccagtttctaa 63 Query: 314 atcctaaag 322 |||| |||| Sbjct: 64 atcccaaag 72
>gb|DQ205668.1| Glycine soja BTF3-like protein 1 gene, partial sequence Length = 879 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 254 ccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagtttctga 313 ||||||| | ||| || |||||||| |||||||||||||| || ||||| |||||||| | Sbjct: 3 ccatcccggctattgaggaggtcaatatctttaaggatgacgtagttatccagtttctaa 62 Query: 314 atcctaaag 322 |||| |||| Sbjct: 63 atcccaaag 71
>gb|DQ205663.1| Glycine falcata BTF3-like protein 2B gene, partial sequence Length = 702 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 254 ccatccctggtatcgaagaggtcaacatctttaaggatgatgtggttattcagtttctga 313 ||||||||| ||| || || ||||| |||||||||||||| || ||||| |||||||| | Sbjct: 4 ccatccctgctattgaggaagtcaatatctttaaggatgacgtagttatccagtttctaa 63 Query: 314 atcctaaag 322 |||| |||| Sbjct: 64 atcccaaag 72
>gb|AF051234.1|AF051234 Picea mariana transcription factor BTF3 homolog (Sb48) mRNA, partial cds Length = 841 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 205 acagatgacaaaaggctccagagtaccctgaaaagagtaggagtgaacaccatccctggt 264 |||||||||||||| ||||| |||||| |||| || |||||||||| | || |||| | Sbjct: 2 acagatgacaaaagactccaaagtaccttgaagaggttaggagtgaatagtattcctgct 61 Query: 265 atcgaagaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaagtg 324 || ||||| || || || || |||||||| |||| ||||| || | || || ||||| Sbjct: 62 attgaagaagtgaatattttcaaggatgagatggtcattcatttcgtaaacccaaaagtt 121 Query: 325 caagcttcaattggcgctaatacatgggtggtcagtggaactccacagacaaa 377 ||||| || ||| || ||||||||||||||||||||| | || |||||||| Sbjct: 122 caagcctctattcaggccaatacatgggtggtcagtggatcgcctcagacaaa 174
>gb|DQ205666.1| Teramnus labialis BTF3-like protein 1 gene, partial sequence Length = 764 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 271 gaggtcaacatctttaaggatgatgtggttattcagtttctgaatcctaaag 322 |||||||| |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 7 gaggtcaatatctttaaggatgacgtagttatccagtttctaaatcccaaag 58
>gb|AY439887.1| Armigeres subalbatus ASAP ID: 43879 transcription factor mRNA sequence Length = 1064 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 247 gtgaacaccatccctggtatcgaagaggtcaa 278 ||||||||||||||||| || ||||||||||| Sbjct: 197 gtgaacaccatccctggaattgaagaggtcaa 228
>ref|XM_980983.1| PREDICTED: Mus musculus hypothetical protein LOC670377 (LOC670377), mRNA Length = 1740 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 499 gctggtgccagtgcaggtgctgct 522 |||||||||||||||||||||||| Sbjct: 600 gctggtgccagtgcaggtgctgct 577
>ref|XM_991216.1| PREDICTED: Mus musculus hypothetical protein LOC676574 (LOC676574), mRNA Length = 693 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 499 gctggtgccagtgcaggtgctgct 522 |||||||||||||||||||||||| Sbjct: 357 gctggtgccagtgcaggtgctgct 334
>ref|XM_979476.1| PREDICTED: Mus musculus hypothetical protein LOC665791 (LOC665791), mRNA Length = 585 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 499 gctggtgccagtgcaggtgctgct 522 |||||||||||||||||||||||| Sbjct: 357 gctggtgccagtgcaggtgctgct 334
>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete sequence Length = 175199 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 499 gctggtgccagtgcaggtgctgct 522 |||||||||||||||||||||||| Sbjct: 109216 gctggtgccagtgcaggtgctgct 109193
>ref|XM_480329.1| Oryza sativa (japonica cultivar-group), mRNA Length = 297 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gtctctcccgctcctatcctctc 38 ||||||||||||||||||||||| Sbjct: 59 gtctctcccgctcctatcctctc 37
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gtctctcccgctcctatcctctc 38 ||||||||||||||||||||||| Sbjct: 4371899 gtctctcccgctcctatcctctc 4371877
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gtctctcccgctcctatcctctc 38 ||||||||||||||||||||||| Sbjct: 134693 gtctctcccgctcctatcctctc 134671
>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_B10 Length = 115074 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 gtctctcccgctcctatcctctc 38 ||||||||||||||||||||||| Sbjct: 19075 gtctctcccgctcctatcctctc 19053
>gb|AC169984.2| Mus musculus BAC clone RP23-450I9 from chromosome 6, complete sequence Length = 181976 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 ctcctatcctctccttccccct 47 |||||||||||||||||||||| Sbjct: 102317 ctcctatcctctccttccccct 102338
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 gccgctggcatcgaggctggtg 505 |||||||||||||||||||||| Sbjct: 1019316 gccgctggcatcgaggctggtg 1019295
>gb|AF238378.5| Homo sapiens chromosome 8 clone SCb-561b17 map p23.1, complete sequence Length = 128544 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggt 516 ||||||||||||||||||||| Sbjct: 104671 gaggctggtgccagtgcaggt 104691
>gb|AC183677.2| Pan troglodytes BAC clone CH251-520E8 from chromosome 9, complete sequence Length = 174731 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggt 516 ||||||||||||||||||||| Sbjct: 156269 gaggctggtgccagtgcaggt 156289
>gb|AF228730.8| Homo sapiens chromosome 8 clones SCb-332a23, CTB-415D8 map p23.1, complete sequences Length = 295854 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggt 516 ||||||||||||||||||||| Sbjct: 40536 gaggctggtgccagtgcaggt 40556
>gb|AY149920.1| Homo sapiens activated T-cell marker CD109 (CD109) mRNA, complete cds Length = 4338 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 tgacaaaaggctccagagtaccctgaaaa 238 |||||| ||||| |||||||||||||||| Sbjct: 2607 tgacaataggctacagagtaccctgaaaa 2635
>emb|AL590428.7| Human DNA sequence from clone RP11-553A21 on chromosome 6 Contains the 5' end of the SLC17A5 gene for solute carrier family 17 (anion/sugar transporter), member 5, the 5' end of the gene for CD109 (CD109) and three CpG islands, complete sequence Length = 163577 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 tgacaaaaggctccagagtaccctgaaaa 238 |||||| ||||| |||||||||||||||| Sbjct: 138724 tgacaataggctacagagtaccctgaaaa 138752
>gb|AC183111.3| Pan troglodytes BAC clone CH251-294L3 from chromosome 9, complete sequence Length = 150130 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 gaggctggtgccagtgcaggt 516 ||||||||||||||||||||| Sbjct: 131669 gaggctggtgccagtgcaggt 131689
>gb|AC183110.3| Pan troglodytes BAC clone CH251-353M12 from chromosome 8, complete sequence Length = 165123 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 gaggctggtgccagtgcaggt 516 ||||||||||||||||||||| Sbjct: 27558 gaggctggtgccagtgcaggt 27538
>emb|AL834478.1|HSM805581 Homo sapiens mRNA; cDNA DKFZp762L1111 (from clone DKFZp762L1111) Length = 2938 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 tgacaaaaggctccagagtaccctgaaaa 238 |||||| ||||| |||||||||||||||| Sbjct: 834 tgacaataggctacagagtaccctgaaaa 862
>ref|NM_133493.1| Homo sapiens CD109 molecule (CD109), mRNA Length = 5883 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 tgacaaaaggctccagagtaccctgaaaa 238 |||||| ||||| |||||||||||||||| Sbjct: 2719 tgacaataggctacagagtaccctgaaaa 2747
>gb|AC182393.2| Pan troglodytes BAC clone CH251-503C15 from chromosome 9, complete sequence Length = 230693 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 gaggctggtgccagtgcaggt 516 ||||||||||||||||||||| Sbjct: 23749 gaggctggtgccagtgcaggt 23729
>dbj|AK123960.1| Homo sapiens cDNA FLJ41966 fis, clone PUAEN2009174 Length = 2843 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 tgacaaaaggctccagagtaccctgaaaa 238 |||||| ||||| |||||||||||||||| Sbjct: 816 tgacaataggctacagagtaccctgaaaa 844
>gb|BC059452.1| Danio rerio Rho family GTPase 3a, mRNA (cDNA clone MGC:73080 IMAGE:4146568), complete cds Length = 2044 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 tggttattcagtttctgaatcctaa 320 ||||||||| ||||||||||||||| Sbjct: 1669 tggttattctgtttctgaatcctaa 1645
>ref|NM_199522.1| Danio rerio Rho family GTPase 3a (rnd3a), mRNA Length = 2044 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 tggttattcagtttctgaatcctaa 320 ||||||||| ||||||||||||||| Sbjct: 1669 tggttattctgtttctgaatcctaa 1645
>gb|AF410459.1| Homo sapiens CD109 (CD109) mRNA, complete cds Length = 5883 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 tgacaaaaggctccagagtaccctgaaaa 238 |||||| ||||| |||||||||||||||| Sbjct: 2719 tgacaataggctacagagtaccctgaaaa 2747
>gb|AC019086.7| Homo sapiens BAC clone RP11-360H4 from 2, complete sequence Length = 199934 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 gaggctggtgccagtgcaggt 516 ||||||||||||||||||||| Sbjct: 135151 gaggctggtgccagtgcaggt 135131
>ref|XM_574265.1| PREDICTED: Rattus norvegicus mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (predicted) (Map3k7ip2_predicted), mRNA Length = 4059 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 tggtgccagtgcaggtgctgc 521 ||||||||||||||||||||| Sbjct: 3092 tggtgccagtgcaggtgctgc 3112
>emb|BX641095.1|HSM806923 Homo sapiens mRNA; cDNA DKFZp686N23150 (from clone DKFZp686N23150) Length = 4237 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 tgacaaaaggctccagagtaccctgaaaa 238 |||||| ||||| |||||||||||||||| Sbjct: 2394 tgacaataggctacagagtaccctgaaaa 2422
>gb|BC085788.1| Rattus norvegicus mitogen-activated protein kinase kinase kinase 7 interacting protein 2, mRNA (cDNA clone MGC:93764 IMAGE:7108689), complete cds Length = 4617 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 tggtgccagtgcaggtgctgc 521 ||||||||||||||||||||| Sbjct: 4080 tggtgccagtgcaggtgctgc 4100
>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete sequence Length = 223059 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 tccagagtaccctgaaaagag 241 ||||||||||||||||||||| Sbjct: 18812 tccagagtaccctgaaaagag 18792
>ref|NM_001012062.1| Rattus norvegicus mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (Map3k7ip2), mRNA Length = 4617 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 tggtgccagtgcaggtgctgc 521 ||||||||||||||||||||| Sbjct: 4080 tggtgccagtgcaggtgctgc 4100
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 caagaccacaactacagatg 211 |||||||||||||||||||| Sbjct: 135323 caagaccacaactacagatg 135304
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 caagaccacaactacagatg 211 |||||||||||||||||||| Sbjct: 30521 caagaccacaactacagatg 30502
>gb|AC124715.4| Mus musculus BAC clone RP24-130P22 from chromosome 14, complete sequence Length = 178742 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aactacagatgacaaaaggc 220 |||||||||||||||||||| Sbjct: 160424 aactacagatgacaaaaggc 160405
>gb|AC108410.9| Mus musculus chromosome 7, clone RP23-480A17, complete sequence Length = 184780 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aagaaggctgtacacaagac 197 |||||||||||||||||||| Sbjct: 101982 aagaaggctgtacacaagac 101963 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aagaaggctgtacacaagac 197 |||||||||||||||||||| Sbjct: 20748 aagaaggctgtacacaagac 20767
>emb|AL590666.8| Human DNA sequence from clone RP11-66D17 on chromosome 1 Contains the 3' end of the SH2D2A gene for SH2 domain protein 2A, the PRCC gene for papillary renal cell carcinoma (translocation-associated), the HDGF gene for hepatoma-derived growth factor (high-mobility group protein 1-like), the MRPL24 gene for mitochondrial ribosomal protein L24, the gene for CGI-41 protein (CGI-41), a novel gene (FLJ12671), a novel gene, the CRABP2 gene for cellular retinoic acid binding protein 2, a novel gene, the gene for NES nestin, the 5' end of a novel gene, the 3' end of the BCAN gene for brevican and 5 CpG islands, complete sequence Length = 160597 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 gtcctgacaacttggacaacctcc 442 ||||||| |||||||||||||||| Sbjct: 101611 gtcctgagaacttggacaacctcc 101634
>emb|AL513170.16| Human DNA sequence from clone RP11-285B4 on chromosome 1, complete sequence Length = 96748 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 atgtagaaaagctcaagaaa 129 |||||||||||||||||||| Sbjct: 18488 atgtagaaaagctcaagaaa 18469
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 477 tggtggtgccgctggcatcgaggctggtgcca 508 |||||||| || ||||||||||| |||||||| Sbjct: 532977 tggtggtgacgttggcatcgaggatggtgcca 533008
>gb|AC162877.2| Mus musculus chromosome 7, clone RP24-211E6, complete sequence Length = 158727 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aagaaggctgtacacaagac 197 |||||||||||||||||||| Sbjct: 51341 aagaaggctgtacacaagac 51322
>ref|XM_775903.1| PREDICTED: Strongylocentrotus purpuratus similar to Cathepsin L2 precursor (Cathepsin V) (Cathepsin U) (LOC575506), mRNA Length = 990 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 gacgatgatgatgtccctga 551 |||||||||||||||||||| Sbjct: 341 gacgatgatgatgtccctga 322
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 ggctgacgacgatgatgatg 544 |||||||||||||||||||| Sbjct: 227623 ggctgacgacgatgatgatg 227604
>gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete sequence Length = 100538 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ttatcaatcaacttggtcct 423 |||||||||||||||||||| Sbjct: 35231 ttatcaatcaacttggtcct 35212
>gb|AC114965.2| Homo sapiens chromosome 5 clone RP11-28P24, complete sequence Length = 66471 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcaatcaacttggtcctga 425 |||||||||||||||||||| Sbjct: 55395 atcaatcaacttggtcctga 55376
>gb|AC113397.2| Homo sapiens chromosome 5 clone RP11-433B15, complete sequence Length = 162386 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcaatcaacttggtcctga 425 |||||||||||||||||||| Sbjct: 32489 atcaatcaacttggtcctga 32470
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 tggtgccgctggcatcgagg 499 |||||||||||||||||||| Sbjct: 825478 tggtgccgctggcatcgagg 825497
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 caagaccacaactacagatg 211 |||||||||||||||||||| Sbjct: 29251864 caagaccacaactacagatg 29251845
>gb|AC139722.1| Homo sapiens BAC clone RP11-100N20 from 4, complete sequence Length = 116694 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 atcaacttggtcctgacaac 429 |||||||||||||||||||| Sbjct: 89370 atcaacttggtcctgacaac 89351
>gb|AY524791.1| Verticillium dahliae allergen Asp f2-like protein mRNA, complete cds Length = 1136 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 tggtggtgccgctggcatcg 496 |||||||||||||||||||| Sbjct: 952 tggtggtgccgctggcatcg 933
>gb|AC010656.7|AC010656 Homo sapiens clone RP11-275E24, complete sequence Length = 139032 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctatcctctccttccccct 47 |||||||||||||||||||| Sbjct: 93713 cctatcctctccttccccct 93694
>gb|AC153629.3| Mus musculus 6 BAC RP23-462O13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 177194 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tcctccactcctggtctctc 22 |||||||||||||||||||| Sbjct: 95936 tcctccactcctggtctctc 95955
>gb|BC019368.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type, 8, mRNA (cDNA clone IMAGE:4010865), partial cds Length = 1192 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 atgaatgtagaaaagctcaa 125 |||||||||||||||||||| Sbjct: 407 atgaatgtagaaaagctcaa 388
>gb|AC139575.3| Mus musculus BAC clone RP23-430K5 from 8, complete sequence Length = 192317 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 aatcaacttggtcctgacaa 428 |||||||||||||||||||| Sbjct: 56736 aatcaacttggtcctgacaa 56717 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,103,145 Number of Sequences: 3902068 Number of extensions: 5103145 Number of successful extensions: 104370 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103795 Number of HSP's gapped (non-prelim): 549 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)