>dbj|AB069966.1| Oryza sativa (japonica cultivar-group) OsCLC-1 mRNA for chloride
            channel, complete cds
          Length = 2669

 Score = 42.1 bits (21), Expect = 0.086
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 19   cttcatgaaggagaaggngaaaac 42
            ||||||||||||||||| ||||||
Sbjct: 2106 cttcatgaaggagaaggtgaaaac 2129

>dbj|AK066027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045I23, full
            insert sequence
          Length = 2887

 Score = 42.1 bits (21), Expect = 0.086
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 19   cttcatgaaggagaaggngaaaac 42
            ||||||||||||||||| ||||||
Sbjct: 2311 cttcatgaaggagaaggtgaaaac 2334

>gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1434D10 map
             near E1419S, complete sequence
          Length = 133421

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    gaacttcatgaaggagaag 34
             |||||||||||||||||||
Sbjct: 83219 gaacttcatgaaggagaag 83201

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 16       gaacttcatgaaggagaag 34
                |||||||||||||||||||
Sbjct: 23820732 gaacttcatgaaggagaag 23820750

>gb|AC139213.11| Mus musculus chromosome 7, clone RP23-341H2, complete sequence
          Length = 189709

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     gaaggaacttcatgaagga 30
              |||||||||||||||||||
Sbjct: 165471 gaaggaacttcatgaagga 165453

>gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete sequence
          Length = 234064

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      tctgaatggaaggaacttc 22
              |||||||||||||||||||
Sbjct: 189362 tctgaatggaaggaacttc 189344

>emb|AJ627420.1| Uncultured crenarchaeote genomic fragment 6a13
          Length = 35469

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 15   ggaacttcatgaaggagaa 33
            |||||||||||||||||||
Sbjct: 9927 ggaacttcatgaaggagaa 9945

>gb|AC115452.4| Rattus norvegicus 7 BAC CH230-309G3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 169133

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     ctgaatggaaggaacttca 23
             |||||||||||||||||||
Sbjct: 73056 ctgaatggaaggaacttca 73074

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 16       gaacttcatgaaggagaag 34
                |||||||||||||||||||
Sbjct: 23813820 gaacttcatgaaggagaag 23813838

>gb|AC073488.23| Homo sapiens X BAC RP11-126O22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70393

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     atggaaggaacttcatgaa 27
             |||||||||||||||||||
Sbjct: 11016 atggaaggaacttcatgaa 11034

>emb|AL732613.10| Mouse DNA sequence from clone RP23-193A21 on chromosome 4, complete
             sequence
          Length = 204012

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    ggaacttcatgaaggagaa 33
             |||||||||||||||||||
Sbjct: 41852 ggaacttcatgaaggagaa 41870

>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence
          Length = 200592

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 1     tcttctgaatggaaggaa 18
             ||||||||||||||||||
Sbjct: 43445 tcttctgaatggaaggaa 43428

>ref|XM_445598.1| Candida glabrata CBS138, CAGL0D04180g partial mRNA
          Length = 2103

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 13   aaggaacttcatgaaggagaag 34
            |||||||| |||||||||||||
Sbjct: 1713 aaggaactacatgaaggagaag 1734

>gb|AC016877.11| Homo sapiens chromosome 8, clone RP11-44N12, complete sequence
          Length = 188593

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 6      tgaatggaaggaacttca 23
              ||||||||||||||||||
Sbjct: 177925 tgaatggaaggaacttca 177942

>gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complete sequence
          Length = 183325

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 1     tcttctgaatggaaggaa 18
             ||||||||||||||||||
Sbjct: 81917 tcttctgaatggaaggaa 81900

>gb|AC162370.4| Mus musculus chromosome 7, clone RP23-32F4, complete sequence
          Length = 225308

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 14     aggaacttcatgaaggagaagg 35
              ||||||||||| ||||||||||
Sbjct: 173323 aggaacttcatcaaggagaagg 173302

>emb|AL358858.19| Human DNA sequence from clone RP11-239I22 on chromosome 1 Contains part
             of the USH2A gene for Usher syndrome 2A (autosomal
             recessive, mild), complete sequence
          Length = 93856

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                       
Query: 5     ctgaatggaaggaacttcatgaagga 30
             ||||| |||||| |||||||||||||
Sbjct: 51658 ctgaagggaaggcacttcatgaagga 51633

>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 13     aaggaacttcatgaaggagaag 34
              |||||||| |||||||||||||
Sbjct: 411888 aaggaactacatgaaggagaag 411867

>gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, complete sequence
          Length = 153411

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     tgaatggaaggaacttca 23
             ||||||||||||||||||
Sbjct: 51288 tgaatggaaggaacttca 51271

>ref|NM_029714.1| Mus musculus RIKEN cDNA 1700067C01 gene (1700067C01Rik), mRNA
          Length = 4456

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 1    tcttctgaatggaaggaa 18
            ||||||||||||||||||
Sbjct: 1793 tcttctgaatggaaggaa 1776

>dbj|AK138347.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230075J08 product:hypothetical protein,
            full insert sequence
          Length = 2697

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 1    tcttctgaatggaaggaa 18
            ||||||||||||||||||
Sbjct: 1317 tcttctgaatggaaggaa 1300

>dbj|AK077059.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932441M08 product:hypothetical P-loop
            containing nucleotide triphosphate hydrolases structure
            containing protein, full insert sequence
          Length = 4456

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 1    tcttctgaatggaaggaa 18
            ||||||||||||||||||
Sbjct: 1793 tcttctgaatggaaggaa 1776

>gb|AC073599.16|AC073599 Mus musculus 7 BAC RP23-8M3 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 226256

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 14    aggaacttcatgaaggagaagg 35
             ||||||||||| ||||||||||
Sbjct: 57492 aggaacttcatcaaggagaagg 57471

>gb|AC093763.3| Homo sapiens BAC clone RP11-91J3 from 4, complete sequence
          Length = 154684

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 11    ggaaggaacttcatgaaggaga 32
             |||||||| |||||||||||||
Sbjct: 36550 ggaaggaatttcatgaaggaga 36529

>gb|AC154587.2| Mus musculus BAC clone RP23-363H23 from chromosome 14, complete
             sequence
          Length = 171713

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 1     tcttctgaatggaaggaa 18
             ||||||||||||||||||
Sbjct: 98705 tcttctgaatggaaggaa 98722

>gb|AC155835.3| Mus musculus 6 BAC RP24-532I24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 157114

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                       
Query: 9     atggaaggaacttcatgaaggagaag 34
             ||||||| |||||||||||| |||||
Sbjct: 49687 atggaagaaacttcatgaagcagaag 49662

>gb|AC153834.2| Mus musculus 6 BAC RP23-367J4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 152354

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                        
Query: 9      atggaaggaacttcatgaaggagaag 34
              ||||||| |||||||||||| |||||
Sbjct: 133269 atggaagaaacttcatgaagcagaag 133244

>gb|AC007106.6|AC007106 Homo sapiens chromosome 4 clone C0383J20 map 4p16, complete sequence
          Length = 172188

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     aacttcatgaaggagaag 34
              ||||||||||||||||||
Sbjct: 150060 aacttcatgaaggagaag 150077

>emb|BX119994.7| Mouse DNA sequence from clone RP23-272G10 on chromosome X, complete
             sequence
          Length = 174006

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 13    aaggaacttcatgaagga 30
             ||||||||||||||||||
Sbjct: 49300 aaggaacttcatgaagga 49283

>emb|AL591586.8| Mouse DNA sequence from clone RP23-126L18 on chromosome 2, complete
             sequence
          Length = 187043

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 10    tggaaggaacttcatgaaggag 31
             ||||||||||||| ||||||||
Sbjct: 72207 tggaaggaacttcctgaaggag 72228

>dbj|AP004294.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1651H12
          Length = 180236

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 6     tgaatggaaggaacttca 23
             ||||||||||||||||||
Sbjct: 19582 tgaatggaaggaacttca 19599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 466,500
Number of Sequences: 3902068
Number of extensions: 466500
Number of successful extensions: 150953
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150821
Number of HSP's gapped (non-prelim): 132
length of query: 44
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 24
effective length of database: 17,155,003,908
effective search space: 411720093792
effective search space used: 411720093792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)