ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8j24 |
|---|---|
| Clone Library Name | barley_pub |
>YN9B_YEAST (P52923) Protein YNR074C| Length = 378 Score = 40.8 bits (94), Expect = 0.003 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 12/123 (9%) Frame = +3 Query: 219 LKESLDTKGRVMVEKDLRVKGHD--NIFAIGDITDIPEIKQGYLAQKH--ALLVAKNLKL 386 + + D KG + VEK+ RVK + N+FAIGD+T+ G + + + +L + Sbjct: 252 ISDLCDKKGFIQVEKNFRVKAVEAGNVFAIGDVTNFR--YHGLVKRDNWVDVLTRNVISS 309 Query: 387 LIKGSPPSKLAT--YSTGFPLAIVSLGRKEGLAQLPYLTLTGC--IPGML----KSKDLF 542 L +G+ S + TG + VSLG G Q P L L G IP L KSK+LF Sbjct: 310 LQEGTEASLVDADCLETGHAPSGVSLGPNAGFGQFP-LPLLGTINIPSFLISRAKSKNLF 368 Query: 543 VGK 551 K Sbjct: 369 SDK 371
>SQRD_MOUSE (Q9R112) Sulfide:quinone oxidoreductase, mitochondrial precursor| (EC 1.-.-.-) Length = 450 Score = 38.1 bits (87), Expect = 0.019 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%) Frame = +3 Query: 141 GETITADCHFVCIGKPLSSSWXHDTILKES--LDTKGRVMVEKD-LRVKGHDNIFAIGDI 311 GET + + P+S+ +LK S D+ G V V+K+ L+ K + N+F IGD Sbjct: 282 GETHVIPYEMLHVTPPMSAP----DVLKRSPVADSAGWVDVDKETLQHKKYPNVFGIGDC 337 Query: 312 TDIPEIKQGYLAQKHALLVAKNLKLLIKGSPPSKLATYSTGFPL 443 T++P K + ++ + + L++K P K T PL Sbjct: 338 TNLPTSKTAAAVAAQSGILDRTMCLIMKNQRPIKKYDGYTSCPL 381
>SQRD_HUMAN (Q9Y6N5) Sulfide:quinone oxidoreductase, mitochondrial precursor| (EC 1.-.-.-) Length = 450 Score = 37.4 bits (85), Expect = 0.033 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Frame = +3 Query: 141 GETITADCHFVCIGKPLSSSWXHDTILKES--LDTKGRVMVEKD-LRVKGHDNIFAIGDI 311 GET + + P+S +LK S D G V V+K+ L+ + + N+F IGD Sbjct: 282 GETQVISYEMLHVTPPMSPP----DVLKTSPVADAAGWVDVDKETLQHRRYPNVFGIGDC 337 Query: 312 TDIPEIKQGYLAQKHALLVAKNLKLLIKGSPPSKLATYSTGFPL 443 T++P K + ++ + + +++K P+K T PL Sbjct: 338 TNLPTSKTAAAVAAQSGILDRTISVIMKNQTPTKKYDGYTSCPL 381
>DLDH_MOUSE (O08749) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC| 1.8.1.4) (Dihydrolipoamide dehydrogenase) Length = 509 Score = 35.0 bits (79), Expect = 0.16 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +3 Query: 135 SGG--ETITADCHFVCIG-KPLSSSWXHDTILKESLDTKGRVMVEKDLRVKGHDNIFAIG 305 SGG E IT D VCIG +P + + + + E LD KGR+ V + K NI+AIG Sbjct: 297 SGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIE-LDPKGRIPVNNRFQTK-IPNIYAIG 354 Query: 306 DITDIP 323 D+ P Sbjct: 355 DVVAGP 360
>DLDH_PIG (P09623) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC| 1.8.1.4) (Dihydrolipoamide dehydrogenase) Length = 509 Score = 33.5 bits (75), Expect = 0.48 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +3 Query: 135 SGG--ETITADCHFVCIG-KPLSSSWXHDTILKESLDTKGRVMVEKDLRVKGHDNIFAIG 305 SGG E IT D VCIG +P + + + + E LD +GR+ V + K NI+AIG Sbjct: 297 SGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIE-LDPRGRIPVNTRFQTK-IPNIYAIG 354 Query: 306 DITDIP 323 D+ P Sbjct: 355 DVVAGP 360
>DLDH_MACFA (Q60HG3) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC| 1.8.1.4) (Dihydrolipoamide dehydrogenase) Length = 509 Score = 33.5 bits (75), Expect = 0.48 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +3 Query: 135 SGG--ETITADCHFVCIG-KPLSSSWXHDTILKESLDTKGRVMVEKDLRVKGHDNIFAIG 305 SGG E IT D VCIG +P + + + + E LD +GR+ V + K NI+AIG Sbjct: 297 SGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIE-LDPRGRIPVNTRFQTK-IPNIYAIG 354 Query: 306 DITDIP 323 D+ P Sbjct: 355 DVVAGP 360
>DLDH_HUMAN (P09622) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC| 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Glycine cleavage system L protein) Length = 509 Score = 33.5 bits (75), Expect = 0.48 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +3 Query: 135 SGG--ETITADCHFVCIG-KPLSSSWXHDTILKESLDTKGRVMVEKDLRVKGHDNIFAIG 305 SGG E IT D VCIG +P + + + + E LD +GR+ V + K NI+AIG Sbjct: 297 SGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIE-LDPRGRIPVNTRFQTK-IPNIYAIG 354 Query: 306 DITDIP 323 D+ P Sbjct: 355 DVVAGP 360
>DLDH_CANFA (P49819) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC| 1.8.1.4) (Dihydrolipoamide dehydrogenase) Length = 509 Score = 33.5 bits (75), Expect = 0.48 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +3 Query: 135 SGG--ETITADCHFVCIG-KPLSSSWXHDTILKESLDTKGRVMVEKDLRVKGHDNIFAIG 305 SGG E IT D VCIG +P + + + + E LD +GR+ V + K NI+AIG Sbjct: 297 SGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIE-LDPRGRIPVNTRFQTK-IPNIYAIG 354 Query: 306 DITDIP 323 D+ P Sbjct: 355 DVVAGP 360
>NPBL_MOUSE (Q6KCD5) Nipped-B-like protein (Delangin homolog) (SCC2 homolog)| Length = 2798 Score = 33.1 bits (74), Expect = 0.62 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 5/90 (5%) Frame = +2 Query: 314 RYS*NQTRVPRPEARAAGSEEPEATDQGVASEQARHLQHRVPAGDRLPGKEGRAGAAALP 493 R+ +Q+RV RPE + S +T + + +HR +GD G + P Sbjct: 830 RHRGDQSRVRRPETLRSSSRNDHSTKSDGSKTEKLERKHRHESGDSRDRPSGE--QKSRP 887 Query: 494 DAHRVHTGDAQ-----IQGPVRRQDEEADG 568 D+ RV GD + P + D+ +G Sbjct: 888 DSPRVKQGDTNKSRPGFKSPNSKDDKRTEG 917
>XAPB_ECOLI (P45562) Xanthosine permease (Xanthosine transporter)| Length = 418 Score = 33.1 bits (74), Expect = 0.62 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = -2 Query: 403 GDPLISSFRFFATSSACFWARYPCLISGISVMSPIAKMLS*PFTLKSFSTITLPLVS 233 G+P + F + F +YP ++ +S M+ + +L+ PF LK F T+ L+S Sbjct: 231 GNPFLHDFARNPEFADSFVVKYPSILLSVSQMAEVGFILTIPFFLKRFGIKTVMLMS 287
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 32.0 bits (71), Expect = 1.4 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Frame = +2 Query: 341 PRPEARAAGSEEPEATDQGVASEQARHLQHRV--PAGDRLPGKEGRAGAAALPDAHRVHT 514 P PEA++A E+ EA D G +QA + PA ++ P ++ R + P+ V Sbjct: 163 PAPEAQSAAPEKVEAHDAGAPVQQAETTESAPAEPAAEKAPAEKRRYEVSMEPEKDSVQA 222 Query: 515 GDAQIQGPVRRQDEEADG 568 D EADG Sbjct: 223 ------------DTEADG 228
>PACC_EMENI (Q00202) pH-response transcription factor pacC/RIM101| Length = 678 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Frame = -3 Query: 573 SGPSASSSCRRTGPWI*ASP------VCTR*ASGRAAAPALPSFPGRRSPAGTRCCRWRA 412 S P+A+ T P + A+ V + A+G AA+P P+ R PA C W+ Sbjct: 24 SQPAAAQVTTVTSPSVTATAAAATAAVASPQANGNAASPVAPASSTSR-PAEELTCMWQG 82 Query: 411 CSEATP 394 CSE P Sbjct: 83 CSEKLP 88
>TYTR_TRYBB (P39051) Trypanothione reductase (EC 1.8.1.12) (TR)| (N(1),N(8)-bis(glutathionyl)spermidine reductase) Length = 492 Score = 31.6 bits (70), Expect = 1.8 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Frame = +3 Query: 51 LTLKKVDVLFQQSVDLKSLS-DTEKFYKTSGGETITADCHFVCIGKPLSSSWXHDTILKE 227 LT ++++ ++ SL+ D K G+T+ D + IG+ ++ + Sbjct: 242 LTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGV 301 Query: 228 SLDTKGRVMVEKDLRVKGHDNIFAIGDITD 317 L KG V V++ R NI+AIGDITD Sbjct: 302 KLTPKGGVQVDEFSRTNV-PNIYAIGDITD 330
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 31.2 bits (69), Expect = 2.4 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -3 Query: 543 RTGPWI*ASPVCTR*ASGRAAAPALPSFPGRRSPAGT 433 RTGP P G+ P LP +PGR+ P G+ Sbjct: 776 RTGPTGDPGPTGLMGEKGKLGVPGLPGYPGRQGPKGS 812
>TYTR_TRYCO (P13110) Trypanothione reductase (EC 1.8.1.12) (TR)| (N(1),N(8)-bis(glutathionyl)spermidine reductase) Length = 492 Score = 30.8 bits (68), Expect = 3.1 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Frame = +3 Query: 51 LTLKKVDVLFQQSVDLKSLS-DTEKFYKTSGGETITADCHFVCIGKPLSSSWXHDTILKE 227 L +D++ ++ L+ D K G+T+ D + IG+ + + + Sbjct: 242 LVANGIDIMTNENPSKIELNPDGSKHVTFESGKTLDVDVVMMAIGRLPRTGYLQLQTVGV 301 Query: 228 SLDTKGRVMVEKDLRVKGHDNIFAIGDIT 314 +L KG + V++ R NI+AIGD+T Sbjct: 302 NLTDKGAIQVDEFSRTNV-PNIYAIGDVT 329
>ZO2_CANFA (Q95168) Tight junction protein ZO-2 (Zonula occludens 2 protein)| (Zona occludens 2 protein) (Tight junction protein 2) Length = 1174 Score = 30.8 bits (68), Expect = 3.1 Identities = 20/63 (31%), Positives = 25/63 (39%) Frame = +2 Query: 317 YS*NQTRVPRPEARAAGSEEPEATDQGVASEQARHLQHRVPAGDRLPGKEGRAGAAALPD 496 Y R PEA +P+A G S HL+ R P+ P GR A PD Sbjct: 230 YDRGYDRTYSPEAEYGRRTQPDARHAGSRSRSREHLRSRSPS----PELRGRPDHAGQPD 285 Query: 497 AHR 505 + R Sbjct: 286 SDR 288
>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2124 Score = 30.8 bits (68), Expect = 3.1 Identities = 21/71 (29%), Positives = 29/71 (40%) Frame = +2 Query: 362 AGSEEPEATDQGVASEQARHLQHRVPAGDRLPGKEGRAGAAALPDAHRVHTGDAQIQGPV 541 + S+EP A+ SE+ VP+G LP +GA PD TG G + Sbjct: 773 SASQEPSASQVPSTSEEPYTPSLAVPSGTELPSSGDTSGA---PDLSGDFTGSTDTSGRL 829 Query: 542 RRQDEEADGPE 574 E + G E Sbjct: 830 DSSGEPSGGSE 840
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -3 Query: 543 RTGPWI*ASPVCTR*ASGRAAAPALPSFPGRRSPAGT 433 RTGP P G+ P LP +PGR+ P G+ Sbjct: 776 RTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGS 812
>PGCA_PIG (Q29011) Aggrecan core protein (Cartilage-specific proteoglycan| core protein) (CSPCP) (Fragments) Length = 537 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +2 Query: 341 PRPEARAAGSEEPEATDQGVASEQARHLQHRVPAGDRLPGKEGRAGA 481 P P SE+P A+++ SEQ L VP+ LPG +GA Sbjct: 488 PFPSEEPFPSEKPSASEEPFPSEQPSTLSAPVPSRTELPGSGEVSGA 534
>NDI1_YEAST (P32340) Rotenone-insensitive NADH-ubiquinone oxidoreductase,| mitochondrial precursor (EC 1.6.5.3) (Internal NADH dehydrogenase) Length = 513 Score = 30.4 bits (67), Expect = 4.0 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +3 Query: 219 LKESLDTKGRVMVEKDLRVKGHDNIFAIGD--ITDIPEIKQGYLAQKHALLVAKN 377 + E +K + V L+VKG +NIFAIGD +P Q +A + A +AKN Sbjct: 354 IPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQ--VAHQEAEYLAKN 406
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +2 Query: 437 PAGDRLPGKEGRAGAAALPDAHRVHTGDAQIQGP 538 P LPG +GRAG P +R TG A I+GP Sbjct: 408 PGSRGLPGADGRAGVMG-PPGNRGSTGPAGIRGP 440
>DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)| (DNA polymerase II subunit A) Length = 2207 Score = 30.0 bits (66), Expect = 5.3 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = +2 Query: 431 RVPAGDRLPGKEGRAGAAALPDAHRVHTGDAQIQGPVRRQDEEADGPECLS 583 ++P G PG+E +AAL D QI G +RRQ EE PE S Sbjct: 1947 QIPIGQPEPGQENEELSAALSDRFSKPL-KKQISGLIRRQREELLHPELAS 1996
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.0 bits (66), Expect = 5.3 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 437 PAGDRLPGKEGRAGAAALPDAHRVHTGDAQIQGP 538 P LPG +GRAG P +R TG A ++GP Sbjct: 408 PGSRGLPGADGRAGVMG-PPGNRGSTGPAGVRGP 440
>ANR50_HUMAN (Q9ULJ7) Ankyrin repeat domain-containing protein 50| Length = 1375 Score = 29.6 bits (65), Expect = 6.9 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = +3 Query: 243 GRVMVEKDLRVKGHDNIFAIGDITDIPEIKQGYLAQKHALLVAKNLKLLIKGSPPS 410 GRV V + ++ +GH E+ +GY + + L + + LKL I+GS PS Sbjct: 1323 GRVSVPRTMQDRGHQ------------EVLEGYPSSETELSLKQALKLQIEGSDPS 1366
>GRB14_HUMAN (Q14449) Growth factor receptor-bound protein 14 (GRB14 adapter| protein) Length = 540 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 323 RNICDVTDCKNVIVTLHSQVLLHHYSSLGVQRFLQD 216 R++C + KN + HS L H +GV+R ++D Sbjct: 131 RDVCQLLILKNHYIDDHSWTLFEHLPHIGVERTIED 166
>US02_HHV2H (P13292) Protein US2| Length = 290 Score = 29.6 bits (65), Expect = 6.9 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Frame = -1 Query: 593 RWAGSSIQAHLLPRLADEQVLGFEHPRYAPGERQVGQLRQPFLPS--QGDDRQREPG--- 429 RW S + H PR A + HP P +G+ P PS GDD + PG Sbjct: 212 RWLRSLVAPHNKPRPASSRPHPATHPTQRPCFTCMGRPEIPDEPSWQTGDDDPQNPGPPL 271 Query: 428 AVGGE 414 AVG E Sbjct: 272 AVGDE 276
>APBA1_RAT (O35430) Amyloid beta A4 precursor protein-binding family A member| 1 (Neuron-specific X11 protein) (Neuronal Munc18-1-interacting protein 1) (Mint-1) (Adapter protein X11alpha) Length = 839 Score = 29.6 bits (65), Expect = 6.9 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Frame = +2 Query: 365 GSEEPEATDQGVASEQARH----LQHRVPAGDRLPGKEGRAGAAALPDAHRVHTGDAQIQ 532 GS E E D+ E L+H ++ P AG A P+ HR H Sbjct: 6 GSAEVEVADEAPGGEVNESVEADLEHPEVEEEQQPSPPPPAGHA--PEDHRAHPAPPPPP 63 Query: 533 GPVRRQDEEADGPECLSRPIS 595 P Q+EE + ECL+R S Sbjct: 64 PP---QEEEEERGECLARSAS 81
>RETST_HUMAN (Q6NUM9) All-trans-retinol 13,14-reductase precursor (EC 1.3.99.23)| (All-trans-13,14-dihydroretinol saturase) (RetSat) Length = 610 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Frame = -2 Query: 421 VASLLGGDPLISSFRFFATSSACFWA------RYPCLISGISVMSPIAKM 290 V S+ G PL + F A AC+ A +PC+++ + SPI + Sbjct: 512 VESVTAGSPLTNQFYLAAPRGACYGADHDLGRLHPCVMASLRAQSPIPNL 561
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = +2 Query: 479 AAALPDAHRVHTGDAQIQGPVRRQDEEADGPECLSRPI 592 AA PD R H A QG RR DE A P + P+ Sbjct: 95 AAPSPDGRRFHVEGAPRQGGRRRWDEGAPTPPTAAAPV 132
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = -3 Query: 594 EMGRLKHSGPSASSSCRRTGPWI*ASPVCTR*ASGRAAAPALPSFPGRRSPAGT 433 ++G GP R GP P G+ P LP +PGR+ P G+ Sbjct: 801 QVGPRGEDGPEGPKG--RAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGS 852
>TRXB_MYCLE (P46843) Bifunctional thioredoxin reductase/thioredoxin [Includes:| Thioredoxin reductase (EC 1.8.1.9) (TRXR); Thioredoxin] Length = 458 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +3 Query: 132 TSGGET-ITADCHFVCIGKPLSSSWXHDTILKESLDTKGRVMVEKDLRVKGHDNIFAIGD 308 T+G ET + FV IG SS D + +D G V+V+ D +FA GD Sbjct: 229 TTGEETTLVVTGVFVAIGHEPRSSLVSDVV---DIDPDGYVLVKGRTTSTSMDGVFAAGD 285 Query: 309 ITD 317 + D Sbjct: 286 LVD 288
>POLG_EC05N (Q9YLJ1) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2195 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -2 Query: 271 LKSFSTITLPLVSKDSFRMVSCXHDELSGLPIHTKWQSAVIVSPPD 134 L+S + +P +S+ +RMV DE S T W I+ PPD Sbjct: 491 LQSSCVLCVPWISQTHYRMVQ--QDEYSAAGYITCWYQTNIIVPPD 534
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = -3 Query: 594 EMGRLKHSGPSASSSCRRTGPWI*ASPVCTR*ASGRAAAPALPSFPGRRSPAGT 433 ++G GP R GP P G+ P LP +PGR+ P G+ Sbjct: 570 QVGPRGEDGPEGPKG--RAGPTGDPGPPGQAGEKGKLGVPGLPGYPGRQGPKGS 621
>RPIA_THET8 (Q5SIR5) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 227 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +3 Query: 111 DTEKFYKTSGGETITADCHFVCIGKPL 191 D ++FY T GG I ADC F IG PL Sbjct: 164 DGDEFYFTDGGHLI-ADCRFGPIGDPL 189
>RPIA_THET2 (Q72J47) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 227 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +3 Query: 111 DTEKFYKTSGGETITADCHFVCIGKPL 191 D ++FY T GG I ADC F IG PL Sbjct: 164 DGDEFYFTDGGHLI-ADCRFGPIGDPL 189
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = -3 Query: 594 EMGRLKHSGPSASSSCRRTGPWI*ASPVCTR*ASGRAAAPALPSFPGRRSPAGT 433 ++G GP R GP P G+ P LP +PGR+ P G+ Sbjct: 803 QIGPRGEDGPEGPKG--RAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGS 854 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,491,864 Number of Sequences: 219361 Number of extensions: 1840622 Number of successful extensions: 6103 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 5601 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6086 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
