| Clone Name | bags8j24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ606031.1| Triticum aestivum partial mRNA for putative pyridine nucleotide-disulphide oxidoreductase Length = 723 Score = 928 bits (468), Expect = 0.0 Identities = 557/586 (95%), Gaps = 1/586 (0%) Strand = Plus / Plus Query: 1 cgattacttgaattcgttgatcaaa-ggcttcgaanaagtgccttgattggctgactttg 59 ||||||||||| || ||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 40 cgattacttgatgtcattgatcaaaaggcttcgaagaagtgccttgattggctgacttcc 99 Query: 60 aagaaagtggatgtgcttttccagcaatcagttgacctaaagtcattatcagacacagag 119 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 aagaaagtggatgtgcttttccagcaatcagttgacctaaaatcattatcagacacagag 159 Query: 120 aagttctataaaacatcaggcggagaaacaataacagctgattgccactttgtgtgtatt 179 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 160 aagttctacaaaacatcagctggagaaacaataacagctgattgccactttgtgtgtatt 219 Query: 180 ggcaagccactgagttcatcgtggntacatgataccatcctgaaggaatctttggacacc 239 || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 220 ggtaagccactgagttcatcgtggctacatgataccatcctgaaggaatctttggacacc 279 Query: 240 aagggaagagtaatggtggagaaggacttgagagtgaagggtcacgataacatttttgca 299 || ||||||||||||||||| |||||| | |||||||||||| || |||||||||||||| Sbjct: 280 aaaggaagagtaatggtggaaaaggacctaagagtgaagggttacaataacatttttgca 339 Query: 300 atcggtgacatcacagatattcctgaaatcaaacaagggtacctcgcccagaagcacgcg 359 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 attggtgacatcaccgatattcctgaaatcaaacaagggtacctcgcccagaagcacgcg 399 Query: 360 ctgctggtagcgaagaacctgaagctactgatcaaggggtcgcctccgagcaagctcgcc 419 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ctgctggtagccaagaacctgaagctactgatcaaggggtcgcctccgagcaagctcgcc 459 Query: 420 acctacagcaccgggttcccgctggcgatcgtctccctgggaaggaaggaagggctggcg 479 |||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 460 acctacagcaccggcttcccgctggcgatcgtctccctcggaaggaaggacggactggca 519 Query: 480 cagctgccctacctgacgctcaccgggtgcataccggggatgctcaaatccaaggacctg 539 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 cagctaccctacctgacgctcaccgggtgcataccggggatgctcaaatccaaggacctg 579 Query: 540 ttcgtcggcaagacgaggaagcagatgggcctgaatgcttgagccg 585 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 580 ttcgtcggcaagacgaggaagcagatgggcctgagtgcttgagccg 625
>gb|BT009021.1| Triticum aestivum clone wdk3c.pk007.j3:fis, full insert mRNA sequence Length = 1349 Score = 888 bits (448), Expect = 0.0 Identities = 552/586 (94%), Gaps = 1/586 (0%) Strand = Plus / Plus Query: 1 cgattacttgaattcgttgatcaaa-ggcttcgaanaagtgccttgattggctgactttg 59 ||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 551 cgattacttgatttcattgatcaaaaggcttcgaagaagtgccttgattggctgacttcc 610 Query: 60 aagaaagtggatgtgcttttccagcaatcagttgacctaaagtcattatcagacacagag 119 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 611 aagaaagtggatgtgcttttccagcaatcagttgacctaaaatcattatcagacacagag 670 Query: 120 aagttctataaaacatcaggcggagaaacaataacagctgattgccactttgtgtgtatt 179 |||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 671 aagttctacaaaacatcagctggagaaacaattacagctgattgccactttgtgtgtatc 730 Query: 180 ggcaagccactgagttcatcgtggntacatgataccatcctgaaggaatctttggacacc 239 || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 731 ggtaagccactgagttcatcgtggctacatgataccatcctgaaggaatctttggacacc 790 Query: 240 aagggaagagtaatggtggagaaggacttgagagtgaagggtcacgataacatttttgca 299 || |||||| |||||||||| |||||| |||||||||||||| || |||||||||||||| Sbjct: 791 aaaggaagaataatggtggaaaaggacctgagagtgaagggttacaataacatttttgca 850 Query: 300 atcggtgacatcacagatattcctgaaatcaaacaagggtacctcgcccagaagcacgcg 359 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 attggtgacatcactgatattcctgaaatcaaacaagggtacctcgcccagaagcacgcg 910 Query: 360 ctgctggtagcgaagaacctgaagctactgatcaaggggtcgcctccgagcaagctcgcc 419 ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 911 ctgctggtagccaagaacctgaagctgctgatcaagggggcgcctccgagcaagctcgcc 970 Query: 420 acctacagcaccgggttcccgctggcgatcgtctccctgggaaggaaggaagggctggcg 479 ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 971 acctacatcaccggcttcccgctggcgatcgtctccctcggaaggaaggaagggctggct 1030 Query: 480 cagctgccctacctgacgctcaccgggtgcataccggggatgctcaaatccaaggacctg 539 ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1031 cagctaccgtacctgacgctcaccgggtgcataccagggatgctcaaatccaaggacctg 1090 Query: 540 ttcgtcggcaagacgaggaagcagatgggcctgaatgcttgagccg 585 || ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1091 tttgtcggcaagacgaggaagcagatgggcctaaatgcttgagccg 1136
>gb|AY107334.1| Zea mays PCO062090 mRNA sequence Length = 1457 Score = 492 bits (248), Expect = e-136 Identities = 480/558 (86%) Strand = Plus / Plus Query: 24 aaggcttcgaanaagtgccttgattggctgactttgaagaaagtggatgtgcttttccag 83 |||||||| || |||||||||||||||||||||| |||||||| || ||||| | ||| Sbjct: 543 aaggcttcaaagaagtgccttgattggctgacttcaaagaaagtagacgtgctccttcag 602 Query: 84 caatcagttgacctaaagtcattatcagacacagagaagttctataaaacatcaggcgga 143 ||||||||||| | ||||||||||||||||||||| | || || |||||||||||| Sbjct: 603 caatcagttgagttgggctcattatcagacacagagaaggtgtacaagacatcaggcgga 662 Query: 144 gaaacaataacagctgattgccactttgtgtgtattggcaagccactgagttcatcgtgg 203 |||||| |||||||||||||||||||||| || ||||| |||||||||||||| |||||| Sbjct: 663 gaaacagtaacagctgattgccactttgtatgcattggaaagccactgagttcgtcgtgg 722 Query: 204 ntacatgataccatcctgaaggaatctttggacaccaagggaagagtaatggtggagaag 263 |||||||||||||||| |||||||| ||||| | |||||| |||||||||||||| ||| Sbjct: 723 ctacatgataccatcctaaaggaatccttggatagcaaggggagagtaatggtggaaaag 782 Query: 264 gacttgagagtgaagggtcacgataacatttttgcaatcggtgacatcacagatattcct 323 || || |||||||| ||| ||||||||||||| || ||||||||||||||||||||| Sbjct: 783 gatttaagagtgaaaggttttaataacatttttgcgattggtgacatcacagatattcct 842 Query: 324 gaaatcaaacaagggtacctcgcccagaagcacgcgctgctggtagcgaagaacctgaag 383 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 843 gaaatcaaacaagggtacctcgcccagaagcacgcgctgctagtggcgaagaacctgaag 902 Query: 384 ctactgatcaaggggtcgcctccgagcaagctcgccacctacagcaccgggttcccgctg 443 ||||||| |||||| ||| ||||| || || || ||||||||||| | |||||| Sbjct: 903 ctactgaccaagggtctccctaacagcaaactggcgacttacagcaccggctatccgctg 962 Query: 444 gcgatcgtctccctgggaaggaaggaagggctggcgcagctgccctacctgacgctcacc 503 ||| ||||||| || |||||||||||||||||||| ||| | || | |||||||||| | Sbjct: 963 gcgctcgtctctcttggaaggaaggaagggctggctcagtttccattgctgacgctcagc 1022 Query: 504 gggtgcataccggggatgctcaaatccaaggacctgttcgtcggcaagacgaggaagcag 563 |||||| | || || ||| |||||||| ||| || |||||| ||||||||||||||||| Sbjct: 1023 gggtgcttgccaggcatgatcaaatccggggatctattcgtcagcaagacgaggaagcag 1082 Query: 564 atgggcctgaatgcttga 581 ||||||||||||| |||| Sbjct: 1083 atgggcctgaatggttga 1100
>dbj|AK120153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029P18, full insert sequence Length = 2277 Score = 295 bits (149), Expect = 8e-77 Identities = 300/351 (85%) Strand = Plus / Plus Query: 27 gcttcgaanaagtgccttgattggctgactttgaagaaagtggatgtgcttttccagcaa 86 ||||| || ||||| ||||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 1546 gcttccaaaaagtgtcttgattggctcacttcaaagaaagtagatgtgcttttccagcag 1605 Query: 87 tcagttgacctaaagtcattatcagacacagagaagttctataaaacatcaggcggagaa 146 || ||||| | | |||||||| ||||||||||||| || | |||||||| |||||| Sbjct: 1606 tcgattgacttggattcattatcgaacacagagaagttgtacagaacatcagctggagaa 1665 Query: 147 acaataacagctgattgccactttgtgtgtattggcaagccactgagttcatcgtggnta 206 ||| |||||||||||||||||||||||||||| || |||||||| |||||||| ||| || Sbjct: 1666 acagtaacagctgattgccactttgtgtgtatcggtaagccactcagttcatcatggcta 1725 Query: 207 catgataccatcctgaaggaatctttggacaccaagggaagagtaatggtggagaaggac 266 ||||||||||| || |||||||| ||||||| |||||||||| |||||||||| ||||| Sbjct: 1726 catgataccattctaaaggaatccttggacaacaagggaagactaatggtggaaaaggat 1785 Query: 267 ttgagagtgaagggtcacgataacatttttgcaatcggtgacatcacagatattcctgaa 326 || ||| | || ||| | |||||||||||||||| |||||||||||||||||||||||| Sbjct: 1786 ttaagaataaaaggttataataacatttttgcaattggtgacatcacagatattcctgaa 1845 Query: 327 atcaaacaagggtacctcgcccagaagcacgcgctgctggtagcgaagaac 377 || || ||||| ||||| ||||| ||||| || ||||| ||||| |||||| Sbjct: 1846 attaagcaaggttaccttgcccataagcatgctctgctagtagcaaagaac 1896
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 262 bits (132), Expect = 1e-66 Identities = 256/298 (85%) Strand = Plus / Plus Query: 27 gcttcgaanaagtgccttgattggctgactttgaagaaagtggatgtgcttttccagcaa 86 ||||| || ||||| ||||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 2778070 gcttccaaaaagtgtcttgattggctcacttcaaagaaagtagatgtgcttttccagcag 2778129 Query: 87 tcagttgacctaaagtcattatcagacacagagaagttctataaaacatcaggcggagaa 146 || ||||| | | |||||||| ||||||||||||| || | |||||||| |||||| Sbjct: 2778130 tcgattgacttggattcattatcgaacacagagaagttgtacagaacatcagctggagaa 2778189 Query: 147 acaataacagctgattgccactttgtgtgtattggcaagccactgagttcatcgtggnta 206 ||| |||||||||||||||||||||||||||| || |||||||| |||||||| ||| || Sbjct: 2778190 acagtaacagctgattgccactttgtgtgtatcggtaagccactcagttcatcatggcta 2778249 Query: 207 catgataccatcctgaaggaatctttggacaccaagggaagagtaatggtggagaaggac 266 ||||||||||| || |||||||| ||||||| |||||||||| |||||||||| ||||| Sbjct: 2778250 catgataccattctaaaggaatccttggacaacaagggaagactaatggtggaaaaggat 2778309 Query: 267 ttgagagtgaagggtcacgataacatttttgcaatcggtgacatcacagatattcctg 324 || ||| | || ||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 2778310 ttaagaataaaaggttataataacatttttgcaattggtgacatcacagatattcctg 2778367
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 262 bits (132), Expect = 1e-66 Identities = 256/298 (85%) Strand = Plus / Plus Query: 27 gcttcgaanaagtgccttgattggctgactttgaagaaagtggatgtgcttttccagcaa 86 ||||| || ||||| ||||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 46298 gcttccaaaaagtgtcttgattggctcacttcaaagaaagtagatgtgcttttccagcag 46357 Query: 87 tcagttgacctaaagtcattatcagacacagagaagttctataaaacatcaggcggagaa 146 || ||||| | | |||||||| ||||||||||||| || | |||||||| |||||| Sbjct: 46358 tcgattgacttggattcattatcgaacacagagaagttgtacagaacatcagctggagaa 46417 Query: 147 acaataacagctgattgccactttgtgtgtattggcaagccactgagttcatcgtggnta 206 ||| |||||||||||||||||||||||||||| || |||||||| |||||||| ||| || Sbjct: 46418 acagtaacagctgattgccactttgtgtgtatcggtaagccactcagttcatcatggcta 46477 Query: 207 catgataccatcctgaaggaatctttggacaccaagggaagagtaatggtggagaaggac 266 ||||||||||| || |||||||| ||||||| |||||||||| |||||||||| ||||| Sbjct: 46478 catgataccattctaaaggaatccttggacaacaagggaagactaatggtggaaaaggat 46537 Query: 267 ttgagagtgaagggtcacgataacatttttgcaatcggtgacatcacagatattcctg 324 || ||| | || ||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 46538 ttaagaataaaaggttataataacatttttgcaattggtgacatcacagatattcctg 46595
>ref|NM_114287.2| Arabidopsis thaliana disulfide oxidoreductase/ electron carrier/ oxidoreductase AT3G44190 mRNA, complete cds Length = 1517 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 523 tcaaatccaaggacctgttcgtcggcaagacgaggaag 560 ||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1237 tcaaatctaaggatctgtttgtcgggaagacgaggaag 1274
>emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome 3, BAC clone F26G5 Length = 102873 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 523 tcaaatccaaggacctgttcgtcggcaagacgaggaag 560 ||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 83378 tcaaatctaaggatctgtttgtcgggaagacgaggaag 83341
>gb|BT008451.1| Arabidopsis thaliana At3g44190 gene, complete cds Length = 1104 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 523 tcaaatccaaggacctgttcgtcggcaagacgaggaag 560 ||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1031 tcaaatctaaggatctgtttgtcgggaagacgaggaag 1068
>emb|BX823155.1|CNS0A7AM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB93ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1316 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 523 tcaaatccaaggacctgttcgtcggcaagacgaggaag 560 ||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1066 tcaaatctaaggatctgtttgtcgggaagacgaggaag 1103
>emb|BX823570.1|CNS0A6LH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZG01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 523 tcaaatccaaggacctgttcgtcggcaagacgaggaag 560 ||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1099 tcaaatctaaggatctgtttgtcgggaagacgaggaag 1136
>gb|AY084651.1| Arabidopsis thaliana clone 114123 mRNA, complete sequence Length = 1505 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 523 tcaaatccaaggacctgttcgtcggcaagacgaggaag 560 ||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1237 tcaaatctaaggatctgtttgtcgggaagacgaggaag 1274
>gb|BT002026.1| Arabidopsis thaliana putative protein (At3g44190) mRNA, complete cds Length = 1423 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 523 tcaaatccaaggacctgttcgtcggcaagacgaggaag 560 ||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1127 tcaaatctaaggatctgtttgtcgggaagacgaggaag 1164
>gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, complete sequence Length = 213163 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 459 ggaaggaaggaagggctggcgcagc 483 ||||||||||||||||||| ||||| Sbjct: 93635 ggaaggaaggaagggctggggcagc 93611
>gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome 13, complete sequence Length = 192541 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 459 ggaaggaaggaagggctggcgcagc 483 ||||||||||||||||||| ||||| Sbjct: 161986 ggaaggaaggaagggctggggcagc 161962
>gb|AC064856.5| Homo sapiens BAC clone RP11-264N11 from 2, complete sequence Length = 107706 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 ggatgctcaaatccaaggacc 537 ||||||||||||||||||||| Sbjct: 4847 ggatgctcaaatccaaggacc 4867
>gb|AC160651.2| Pan troglodytes BAC clone CH251-489P13 from chromosome unknown, complete sequence Length = 209305 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 ggatgctcaaatccaaggacc 537 ||||||||||||||||||||| Sbjct: 12486 ggatgctcaaatccaaggacc 12506
>gb|AC153365.7| Mus musculus 10 BAC RP23-273K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207891 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ttggctgactttgaagaaagt 67 ||||||||||||||||||||| Sbjct: 27671 ttggctgactttgaagaaagt 27691
>emb|AL929372.16| Mouse DNA sequence from clone RP23-461G6 on chromosome 2, complete sequence Length = 170342 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 gtcattatcagacacagagaa 121 ||||||||||||||||||||| Sbjct: 52619 gtcattatcagacacagagaa 52639
>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence Length = 166451 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gtctccctgggaaggaagga 469 |||||||||||||||||||| Sbjct: 111695 gtctccctgggaaggaagga 111676
>gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, complete sequence Length = 203772 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 gaggaagcagatgggcctga 573 |||||||||||||||||||| Sbjct: 182694 gaggaagcagatgggcctga 182713
>ref|NM_172821.2| Mus musculus mitogen-activated protein kinase kinase kinase 13 (Map3k13), mRNA Length = 2880 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 atcagacacagagaagttct 126 |||||||||||||||||||| Sbjct: 2550 atcagacacagagaagttct 2531
>gb|DQ480427.1| Mus musculus MAP3K13 (Map3k13) mRNA, complete cds Length = 2880 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 atcagacacagagaagttct 126 |||||||||||||||||||| Sbjct: 2550 atcagacacagagaagttct 2531
>ref|XM_659299.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6787.2), mRNA Length = 1761 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 gctggcgcagctgccctacctgac 496 ||||| |||||||||||||||||| Sbjct: 1152 gctggagcagctgccctacctgac 1175
>gb|AC114990.8| Mus musculus chromosome 16, clone RP24-361F11, complete sequence Length = 179887 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 atcagacacagagaagttct 126 |||||||||||||||||||| Sbjct: 167064 atcagacacagagaagttct 167045
>gb|AC125531.3| Mus musculus BAC clone RP23-396D12 from chromosome 10, complete sequence Length = 219818 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtgtgtattggcaagcca 188 |||||||||||||||||||| Sbjct: 113529 ttgtgtgtattggcaagcca 113510
>emb|CT009693.5| Pig DNA sequence from clone PigE-201H15 on chromosome 7, complete sequence Length = 82411 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gtggatgtgcttttccagca 85 |||||||||||||||||||| Sbjct: 28766 gtggatgtgcttttccagca 28747
>gb|AC110573.11| Mus musculus chromosome 16, clone RP23-322A15, complete sequence Length = 190173 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cagatattcctgaaatcaaa 332 |||||||||||||||||||| Sbjct: 100866 cagatattcctgaaatcaaa 100847
>gb|AC166568.2| Spironucleus vortens clone JGIBAWF-9N8, complete sequence Length = 38345 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acctcgcccagaagcacgcg 359 |||||||||||||||||||| Sbjct: 35587 acctcgcccagaagcacgcg 35606
>gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome 17, complete sequence Length = 200353 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 ggaaggaaggaagggctggc 478 |||||||||||||||||||| Sbjct: 41576 ggaaggaaggaagggctggc 41557
>emb|AL772400.3| Human DNA sequence from clone RP11-540N4 on chromosome X Contains the 3' end of the PRPS1 gene for phosphoribosyl pyrophosphate synthetase 1 (PRSI), complete sequence Length = 74714 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaaacaataacagctgatt 162 |||||||||||||||||||| Sbjct: 26759 agaaacaataacagctgatt 26778
>emb|AL139328.8| Human DNA sequence from clone RP11-84N7 on chromosome 13 Contains part of the DGKH gene for diacylglycerol kinase eta, complete sequence Length = 148430 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 ctgggaaggaaggaagggct 475 |||||||||||||||||||| Sbjct: 73074 ctgggaaggaaggaagggct 73093
>emb|AL121933.15|HSA549D23 Human DNA sequence from clone RP11-549D23 on chromosome 6, complete sequence Length = 185467 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tggctgactttgaagaaagt 67 |||||||||||||||||||| Sbjct: 118820 tggctgactttgaagaaagt 118839
>emb|AL020995.14|HS117O3 Human DNA sequence from clone RP1-117O3 on chromosome 1p33-34.3 Contains the 3' end of a novel gene, the AK2 gene for adenylate kinase 2, the gene for ornithine decarboxylase-like (ODC-p) and a CpG island, complete sequence Length = 150997 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 ggaaggaaggaagggctggc 478 |||||||||||||||||||| Sbjct: 145647 ggaaggaaggaagggctggc 145628
>gb|AC074336.14| Mus musculus Strain C57BL6/J chromosome 1 BAC, RP23-366C17, Complete Sequence, complete sequence Length = 217768 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 ctccctgggaaggaaggaag 471 |||||||||||||||||||| Sbjct: 149474 ctccctgggaaggaaggaag 149455
>emb|Z11595.1|EBHCOMPMR Eptatretus burgeri partial mRNA for hagfish complement Length = 4902 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gtggagaaggacttgagagt 274 |||||||||||||||||||| Sbjct: 2662 gtggagaaggacttgagagt 2681
>emb|AL022018.1|DMC8D8 Drosophila melanogaster cosmid clone 8D8 Length = 38397 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 ggaaggaagggctggcgcagctgc 486 ||||||| |||||||||||||||| Sbjct: 26268 ggaaggatgggctggcgcagctgc 26291
>gb|AC090881.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, RP23-465G4, Complete Sequence, complete sequence Length = 167475 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 ggaaggaaggaagggctggc 478 |||||||||||||||||||| Sbjct: 15354 ggaaggaaggaagggctggc 15373
>gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181360 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 ggaaggaagggctggcgcagctgc 486 ||||||| |||||||||||||||| Sbjct: 22659 ggaaggatgggctggcgcagctgc 22682
>gb|AY119282.1| Drosophila melanogaster SD27341 full insert cDNA Length = 2338 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 463 ggaaggaagggctggcgcagctgc 486 ||||||| |||||||||||||||| Sbjct: 1268 ggaaggatgggctggcgcagctgc 1245
>ref|NM_206602.1| Drosophila melanogaster CG11418-RB, transcript variant B (CG11418), mRNA Length = 1372 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 463 ggaaggaagggctggcgcagctgc 486 ||||||| |||||||||||||||| Sbjct: 323 ggaaggatgggctggcgcagctgc 300
>ref|NM_130548.2| Drosophila melanogaster CG11418-RA, transcript variant A (CG11418), mRNA Length = 2317 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 463 ggaaggaagggctggcgcagctgc 486 ||||||| |||||||||||||||| Sbjct: 1268 ggaaggatgggctggcgcagctgc 1245
>gb|AC106822.3| Homo sapiens chromosome 5 clone RP11-772C9, complete sequence Length = 115988 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 ccctgggaaggaaggaaggg 473 |||||||||||||||||||| Sbjct: 105812 ccctgggaaggaaggaaggg 105831
>gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164252 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 ggaaggaagggctggcgcagctgc 486 ||||||| |||||||||||||||| Sbjct: 82174 ggaaggatgggctggcgcagctgc 82197
>dbj|AK051378.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130043B12 product:similar to LEUCINE ZIPPER BEARING KINASE [Homo sapiens], full insert sequence Length = 4173 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 atcagacacagagaagttct 126 |||||||||||||||||||| Sbjct: 543 atcagacacagagaagttct 524
>gb|AC027347.5|AC027347 Homo sapiens chromosome 5 clone CTD-2562I21, complete sequence Length = 148193 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 attatcagacacagagaagt 123 |||||||||||||||||||| Sbjct: 92188 attatcagacacagagaagt 92207
>dbj|AK047986.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130026N12 product:similar to LEUCINE ZIPPER BEARING KINASE [Homo sapiens], full insert sequence Length = 3672 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 atcagacacagagaagttct 126 |||||||||||||||||||| Sbjct: 624 atcagacacagagaagttct 605
>gb|AC015468.5|AC015468 Homo sapiens chromosome 8, clone RP11-369E15, complete sequence Length = 189662 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 gggaaggaaggaagggctgg 477 |||||||||||||||||||| Sbjct: 111627 gggaaggaaggaagggctgg 111608
>gb|AC026370.31| Homo sapiens 12 BAC RP11-98F7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 89843 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gtggatgtgcttttccagca 85 |||||||||||||||||||| Sbjct: 22733 gtggatgtgcttttccagca 22714
>gb|DQ310040.1| Phelipanche purpurea subsp. bohemica 5 ribosomal protein subunit 2 (rps2) gene, partial cds; plastid Length = 567 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaaacaataacagctgatt 162 |||||||||||||||||||| Sbjct: 171 agaaacaataacagctgatt 190
>gb|DQ310039.1| Phelipanche purpurea subsp. bohemica 1 ribosomal protein subunit 2 (rps2) gene, partial cds; plastid Length = 567 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaaacaataacagctgatt 162 |||||||||||||||||||| Sbjct: 171 agaaacaataacagctgatt 190
>gb|DQ310038.1| Phelipanche purpurea subsp. bohemica 9 ribosomal protein subunit 2 (rps2) gene, partial cds; plastid Length = 567 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaaacaataacagctgatt 162 |||||||||||||||||||| Sbjct: 171 agaaacaataacagctgatt 190
>gb|DQ310037.1| Phelipanche purpurea subsp. bohemica 2 ribosomal protein subunit 2 (rps2) gene, partial cds; plastid Length = 567 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaaacaataacagctgatt 162 |||||||||||||||||||| Sbjct: 171 agaaacaataacagctgatt 190
>gb|DQ310036.1| Phelipanche purpurea subsp. bohemica 3 ribosomal protein subunit 2 (rps2) gene, partial cds; plastid Length = 567 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaaacaataacagctgatt 162 |||||||||||||||||||| Sbjct: 171 agaaacaataacagctgatt 190
>gb|DQ310035.1| Phelipanche purpurea ribosomal protein subunit 2 (rps2) gene, partial cds; plastid Length = 483 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaaacaataacagctgatt 162 |||||||||||||||||||| Sbjct: 144 agaaacaataacagctgatt 163
>gb|AC019181.4| Homo sapiens BAC clone RP11-272E3 from 2, complete sequence Length = 190998 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ttttgcaatcggtgacatca 312 |||||||||||||||||||| Sbjct: 82258 ttttgcaatcggtgacatca 82239
>gb|AC139713.1| Homo sapiens BAC clone RP11-481K16 from 4, complete sequence Length = 196020 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 aaacaataacagctgattgccact 168 |||||||||||| ||||||||||| Sbjct: 62440 aaacaataacagttgattgccact 62417
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acctcgcccagaagcacgcgctgc 363 |||||| ||||||||||||||||| Sbjct: 127624 acctcgtccagaagcacgcgctgc 127601
>gb|AC006142.1|AC006142 Homo sapiens PAC clone RP4-572A3, complete sequence Length = 143623 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 ccctgggaaggaaggaaggg 473 |||||||||||||||||||| Sbjct: 58808 ccctgggaaggaaggaaggg 58827
>gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 of 74 of the complete sequence Length = 308311 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 ggaaggaagggctggcgcagctgc 486 ||||||| |||||||||||||||| Sbjct: 193494 ggaaggatgggctggcgcagctgc 193517
>emb|CT030030.12| Mouse DNA sequence from clone RP23-123J19 on chromosome 12, complete sequence Length = 201738 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 accaagggaagagtaatggtggag 260 ||||||||||||||||||| |||| Sbjct: 81460 accaagggaagagtaatgggggag 81483
>gb|AC134554.6| Mus musculus BAC clone RP24-313F7 from chromosome 15, complete sequence Length = 148029 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 gaggaagcagatgggcctga 573 |||||||||||||||||||| Sbjct: 93647 gaggaagcagatgggcctga 93666
>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence Length = 198582 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 ccctgggaaggaaggaagggctgg 477 ||||||||||||| |||||||||| Sbjct: 148231 ccctgggaaggaaagaagggctgg 148254
>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence Length = 228174 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 ggaaggaaggaagggctggc 478 |||||||||||||||||||| Sbjct: 32473 ggaaggaaggaagggctggc 32454
>emb|CT009503.7| Pig DNA sequence from clone CH242-137E23 on chromosome 7, complete sequence Length = 222099 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gtggatgtgcttttccagca 85 |||||||||||||||||||| Sbjct: 203075 gtggatgtgcttttccagca 203056 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,853,895 Number of Sequences: 3902068 Number of extensions: 5853895 Number of successful extensions: 598697 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 598084 Number of HSP's gapped (non-prelim): 605 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)