| Clone Name | bags8j18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092O17, full insert sequence Length = 2340 Score = 502 bits (253), Expect = e-139 Identities = 523/611 (85%), Gaps = 4/611 (0%) Strand = Plus / Plus Query: 2 ttgtcccacagcttgtctaggtataagctgaagttcagccctgaaa-ggttgatactatg 60 ||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||| Sbjct: 746 ttgtcccacagtttgtctagatataagctgaagttcagtcctgaaaaggttgatactatg 805 Query: 61 atcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatg 120 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 806 atcattcaggccattggcttattggatgatcttgacaaggagcttaacacttatgccatg 865 Query: 121 agggtccgtgaatggtacggttggcactttcccgagctcacgaaaattgttgcagataat 180 ||||| ||||||||||| || ||||||||||| |||||||| |||||||| || ||||| Sbjct: 866 agggttcgtgaatggtatgggtggcactttccagagctcactaaaattgtagctgataac 925 Query: 181 atccattatgctaaagctgtgaagatgatgggcaatcgtgttaatgcagtgaaccttgac 240 || || || || |||| ||||||||||||||| |||| ||| |||| | |||||| Sbjct: 926 atacagtacgcaaaagttgtgaagatgatgggtgatcggactaacgcagaaagccttgat 985 Query: 241 ttctctgagatactaccagaagaagtgg---aagcagagctgaaggaggcagctgtaatt 297 |||||||||||||| |||| || | || ||||| |||| || ||||| || ||||| Sbjct: 986 ttctctgagatactttcagatgatgaggttgaagcacagctaaaagaggcggcagtaata 1045 Query: 298 tccatgggaacagaagtcaatgagcttgacctctcgaacatcagggaactgtgtgatcaa 357 ||||||||||||||||| | ||| |||||| | || |||||||| ||||||||||| Sbjct: 1046 tccatgggaacagaagttagtgaacttgacttgctaaatatcagggagctgtgtgatcag 1105 Query: 358 gtcctggctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaat 417 || |||||||||||||||||||||||||||| | ||| ||||| | ||| |||||||| Sbjct: 1106 gtgttggctctttctgagtacagagcccagctgtttgattatctgagaagcaggatgaac 1165 Query: 418 accattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgca 477 || || || || || ||||||||||||||||| ||| | ||||| ||||| ||||||||| Sbjct: 1166 actatcgcaccaaatttgactgcacttgttggcgaattggttggtgctcgacttattgca 1225 Query: 478 catggtggtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggg 537 ||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || || Sbjct: 1226 catggcggcagtttggtaaatctggccaagcagcctggcagcacaattcagatacttggt 1285 Query: 538 gcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctc 597 ||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1286 gcagagaaggctttgttcagagctctaaagacaaagcatgctacgccaaagtatggtctc 1345 Query: 598 atctatcatgc 608 ||||| ||||| Sbjct: 1346 atctaccatgc 1356
>dbj|AK101143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026N20, full insert sequence Length = 1882 Score = 502 bits (253), Expect = e-139 Identities = 523/611 (85%), Gaps = 4/611 (0%) Strand = Plus / Plus Query: 2 ttgtcccacagcttgtctaggtataagctgaagttcagccctgaaa-ggttgatactatg 60 ||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||| Sbjct: 631 ttgtcccacagtttgtctagatataagctgaagttcagtcctgaaaaggttgatactatg 690 Query: 61 atcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatg 120 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 691 atcattcaggccattggcttattggatgatcttgacaaggagcttaacacttatgccatg 750 Query: 121 agggtccgtgaatggtacggttggcactttcccgagctcacgaaaattgttgcagataat 180 ||||| ||||||||||| || ||||||||||| |||||||| |||||||| || ||||| Sbjct: 751 agggttcgtgaatggtatgggtggcactttccagagctcactaaaattgtagctgataac 810 Query: 181 atccattatgctaaagctgtgaagatgatgggcaatcgtgttaatgcagtgaaccttgac 240 || || || || |||| ||||||||||||||| |||| ||| |||| | |||||| Sbjct: 811 atacagtacgcaaaagttgtgaagatgatgggtgatcggactaacgcagaaagccttgat 870 Query: 241 ttctctgagatactaccagaagaagtgg---aagcagagctgaaggaggcagctgtaatt 297 |||||||||||||| |||| || | || ||||| |||| || ||||| || ||||| Sbjct: 871 ttctctgagatactttcagatgatgaggttgaagcacagctaaaagaggcggcagtaata 930 Query: 298 tccatgggaacagaagtcaatgagcttgacctctcgaacatcagggaactgtgtgatcaa 357 ||||||||||||||||| | ||| |||||| | || |||||||| ||||||||||| Sbjct: 931 tccatgggaacagaagttagtgaacttgacttgctaaatatcagggagctgtgtgatcag 990 Query: 358 gtcctggctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaat 417 || |||||||||||||||||||||||||||| | ||| ||||| | ||| |||||||| Sbjct: 991 gtgttggctctttctgagtacagagcccagctgtttgattatctgagaagcaggatgaac 1050 Query: 418 accattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgca 477 || || || || || ||||||||||||||||| ||| | ||||| ||||| ||||||||| Sbjct: 1051 actatcgcaccaaatttgactgcacttgttggcgaattggttggtgctcgacttattgca 1110 Query: 478 catggtggtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggg 537 ||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || || Sbjct: 1111 catggcggcagtttggtaaatctggccaagcagcctggcagcacaattcagatacttggt 1170 Query: 538 gcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctc 597 ||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1171 gcagagaaggctttgttcagagctctaaagacaaagcatgctacgccaaagtatggtctc 1230 Query: 598 atctatcatgc 608 ||||| ||||| Sbjct: 1231 atctaccatgc 1241
>dbj|AB015431.1| Oryza sativa mRNA for SAR DNA binding protein, partial cds Length = 1638 Score = 502 bits (253), Expect = e-139 Identities = 523/611 (85%), Gaps = 4/611 (0%) Strand = Plus / Plus Query: 2 ttgtcccacagcttgtctaggtataagctgaagttcagccctgaaa-ggttgatactatg 60 ||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||| Sbjct: 600 ttgtcccacagtttgtctagatataagctgaagttcagtcctgaaaaggttgatactatg 659 Query: 61 atcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatg 120 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 660 atcattcaggccattggcttattggatgatcttgacaaggagcttaacacttatgccatg 719 Query: 121 agggtccgtgaatggtacggttggcactttcccgagctcacgaaaattgttgcagataat 180 ||||| ||||||||||| || ||||||||||| |||||||| |||||||| || ||||| Sbjct: 720 agggttcgtgaatggtatgggtggcactttccagagctcactaaaattgtagctgataac 779 Query: 181 atccattatgctaaagctgtgaagatgatgggcaatcgtgttaatgcagtgaaccttgac 240 || || || || |||| ||||||||||||||| |||| ||| |||| | |||||| Sbjct: 780 atacagtacgcaaaagttgtgaagatgatgggtgatcggactaacgcagaaagccttgat 839 Query: 241 ttctctgagatactaccagaagaagtgg---aagcagagctgaaggaggcagctgtaatt 297 |||||||||||||| |||| || | || ||||| |||| || ||||| || ||||| Sbjct: 840 ttctctgagatactttcagatgatgaggttgaagcacagctaaaagaggcggcagtaata 899 Query: 298 tccatgggaacagaagtcaatgagcttgacctctcgaacatcagggaactgtgtgatcaa 357 ||||||||||||||||| | ||| |||||| | || |||||||| ||||||||||| Sbjct: 900 tccatgggaacagaagttagtgaacttgacttgctaaatatcagggagctgtgtgatcag 959 Query: 358 gtcctggctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaat 417 || |||||||||||||||||||||||||||| | ||| ||||| | ||| |||||||| Sbjct: 960 gtgttggctctttctgagtacagagcccagctgtttgattatctgagaagcaggatgaac 1019 Query: 418 accattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgca 477 || || || || || ||||||||||||||||| ||| | ||||| ||||| ||||||||| Sbjct: 1020 actatcgcaccaaatttgactgcacttgttggcgaattggttggtgctcgacttattgca 1079 Query: 478 catggtggtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggg 537 ||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || || Sbjct: 1080 catggcggcagtttggtaaatctggccaagcagcctggcagcacaattcagatacttggt 1139 Query: 538 gcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctc 597 ||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1140 gcagagaaggctttgttcagagctctaaagacaaagcatgctacgccaaagtatggtctc 1199 Query: 598 atctatcatgc 608 ||||| ||||| Sbjct: 1200 atctaccatgc 1210
>gb|AY106099.1| Zea mays PCO066535 mRNA sequence Length = 1500 Score = 468 bits (236), Expect = e-128 Identities = 457/530 (86%), Gaps = 3/530 (0%) Strand = Plus / Plus Query: 82 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggt 141 ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 57 ttggatgatcttgacaaggagcttaacacttatgccatgagagttcgtgaatggtatggc 116 Query: 142 tggcactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtg 201 ||||||||||| |||||||| ||||| ||| |||||||||| || ||||| |||| |||| Sbjct: 117 tggcactttccagagctcaccaaaatagttacagataatatacagtatgccaaagttgtg 176 Query: 202 aagatgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaa 261 |||||||||||||| | ||||||||||| ||||||||||||||||||||| | |||| Sbjct: 177 aagatgatgggcaacagagttaatgcagtcaaccttgacttctctgagatattgtcagat 236 Query: 262 gaagtg---gaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaat 318 |||| | ||| || |||| ||||||||||| ||||| ||||||||||||||||| | | Sbjct: 237 gaagagctagaaacacagctaaaggaggcagcagtaatatccatgggaacagaagttagt 296 Query: 319 gagcttgacctctcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtac 378 || |||||| | ||||| ||||| || || ||||||||||| ||||| |||||||||||| Sbjct: 297 gaccttgacttatcgaatatcagagagctatgtgatcaagtgctggccctttctgagtac 356 Query: 379 agagcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgact 438 ||||||||||| ||||||||| ||| ||| |||||||| || ||||| || || ||||| Sbjct: 357 agagcccagctgtatgactatttaagaagcaggatgaacactattgcaccaaatttgaca 416 Query: 439 gcacttgttggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaat 498 ||||| || |||||| | ||||| ||||||||||||||||||||||| |||||| | ||| Sbjct: 417 gcactggtgggtgaattagttggtgctcgccttattgcacatggtggaagtttgttaaat 476 Query: 499 ctggccaagcaacctggcagcacgattcagattctgggggcagagaaggcgttgttcaga 558 |||||||||| ||||| ||||| |||||||| || || ||||||||||| || |||||| Sbjct: 477 ttggccaagcagcctggtagcacaattcagatacttggtgcagagaaggctttattcaga 536 Query: 559 gctctgaagacaaagcatgctacaccgaagtatggtctcatctatcatgc 608 ||||| |||||||||||| ||||||| |||||||| |||||||| ||||| Sbjct: 537 gctctaaagacaaagcattctacacctaagtatggcctcatctaccatgc 586 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 60 gatcattcaggcaattggcttgttggatgatcttgacaaggagcttaac 108 |||||| || || ||||| || ||||||||||||||||||||||||||| Sbjct: 66 gatcatccaagccattggattattggatgatcttgacaaggagcttaac 18
>dbj|AK073164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023B01, full insert sequence Length = 2147 Score = 424 bits (214), Expect = e-115 Identities = 514/612 (83%), Gaps = 4/612 (0%) Strand = Plus / Plus Query: 1 attgtcccacagcttgtctaggtataagctgaagttcagccctgaaa-ggttgatactat 59 ||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||| Sbjct: 620 attgtcccacagcctgtctagatataagctgaagttcagtcctgaaaaggttgatactat 679 Query: 60 gatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgctat 119 |||||||||||| ||||| || |||||||||||||| |||||||| |||||||| || || Sbjct: 680 gatcattcaggccattggattattggatgatcttgataaggagctcaacacttacgccat 739 Query: 120 gagggtccgtgaatggtacggttggcactttcccgagctcacgaaaattgttgcagataa 179 |||||| ||||||||||| || |||||||| || |||||||| |||||||| || ||||| Sbjct: 740 gagggttcgtgaatggtatgggtggcacttcccagagctcactaaaattgtagctgataa 799 Query: 180 tatccattatgctaaagctgtgaagatgatgggcaatcgtgttaatgcagtgaaccttga 239 || || || || |||| ||||||||||||||| |||| ||| |||| | |||||| Sbjct: 800 catacagtacgcaaaagttgtgaagatgatgggtgatcggactaacgcagaaagccttga 859 Query: 240 cttctctgagatactaccagaagaagtgg---aagcagagctgaaggaggcagctgtaat 296 |||||||||||||| |||| || | || ||||| || | || ||||| || ||||| Sbjct: 860 tttctctgagatactctcagatgatgaggttgaagcacagttaaaagaggcggcagtaat 919 Query: 297 ttccatgggaacagaagtcaatgagcttgacctctcgaacatcagggaactgtgtgatca 356 ||||||||||||||||| | ||| ||||| | || |||||||| ||||||||||| Sbjct: 920 atccatgggaacagaagttagtgaacttgatttgctaaatatcagggagctgtgtgatca 979 Query: 357 agtcctggctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaa 416 || |||||||||||||||||||||||||||| | ||| ||||| | ||| |||||||| Sbjct: 980 ggtgttggctctttctgagtacagagcccagctgtttgattatctgagaagcaggatgaa 1039 Query: 417 taccattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgc 476 || || || || || |||||||||||||| || ||| | ||||| ||||| |||||||| Sbjct: 1040 cactatcgcaccaaatttgactgcacttgtgggcgaattggttggtgctcgacttattgc 1099 Query: 477 acatggtggtagtttgatgaatctggccaagcaacctggcagcacgattcagattctggg 536 ||| ||||| |||||| | |||||||||||||| || |||||||| |||||||| || || Sbjct: 1100 acacggtggcagtttggtaaatctggccaagcagccgggcagcacaattcagatacttgg 1159 Query: 537 ggcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtct 596 ||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 1160 tgcagagaaggctttgttcagagctctcaagacaaaacatgctacgccgaagtatggtct 1219 Query: 597 catctatcatgc 608 ||| || ||||| Sbjct: 1220 catttaccatgc 1231
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Minus Query: 47 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 106 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 13102876 aggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggagctta 13102817 Query: 107 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 166 |||||||||| |||||||| ||||||||||| || ||||||||||| |||||||| |||| Sbjct: 13102816 acacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcactaaaa 13102757 Query: 167 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 212 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13102756 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13102711 Score = 198 bits (100), Expect = 2e-47 Identities = 235/280 (83%) Strand = Plus / Minus Query: 268 gaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgac 327 |||||| |||| || ||||| || ||||| ||||||||||||||||| | ||| |||||| Sbjct: 13102563 gaagcacagctaaaagaggcggcagtaatatccatgggaacagaagttagtgaacttgac 13102504 Query: 328 ctctcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcccag 387 | || |||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 13102503 ttgctaaatatcagggagctgtgtgatcaggtgttggctctttctgagtacagagcccag 13102444 Query: 388 ctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgtt 447 || | ||| ||||| | ||| |||||||| || || || || || ||||||||||||||| Sbjct: 13102443 ctgtttgattatctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgtt 13102384 Query: 448 ggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggccaag 507 || ||| | ||||| ||||| |||||||||||||| || |||||| | |||||||||||| Sbjct: 13102383 ggcgaattggttggtgctcgacttattgcacatggcggcagtttggtaaatctggccaag 13102324 Query: 508 caacctggcagcacgattcagattctgggggcagagaagg 547 || ||||||||||| |||||||| || || |||||||||| Sbjct: 13102323 cagcctggcagcacaattcagatacttggtgcagagaagg 13102284 Score = 168 bits (85), Expect = 1e-38 Identities = 220/265 (83%) Strand = Plus / Minus Query: 283 gaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatcagg 342 ||||| || ||||| ||||||||||||||||| | ||| ||||| | || |||||| Sbjct: 13109862 gaggcggcagtaatatccatgggaacagaagttagtgaacttgatttgctaaatatcagg 13109803 Query: 343 gaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactatcta 402 || ||||||||||| || |||||||||||||||||||||||||||| | ||| ||||| Sbjct: 13109802 gagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattatctg 13109743 Query: 403 aaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgttggc 462 | ||| |||||||| || || || || || |||||||||||||| || ||| | ||||| Sbjct: 13109742 agaagcaggatgaacactatcgcaccaaatttgactgcacttgtgggcgaattggttggt 13109683 Query: 463 gctcgccttattgcacatggtggtagtttgatgaatctggccaagcaacctggcagcacg 522 ||||| ||||||||||| ||||| |||||| | |||||||||||||| || |||||||| Sbjct: 13109682 gctcgacttattgcacacggtggcagtttggtaaatctggccaagcagccgggcagcaca 13109623 Query: 523 attcagattctgggggcagagaagg 547 |||||||| || || |||||||||| Sbjct: 13109622 attcagatacttggtgcagagaagg 13109598 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 47 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 106 ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| | Sbjct: 13110191 aggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctca 13110132 Query: 107 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 166 ||||||| || |||||||| ||||||||||| || |||||||| || |||||||| |||| Sbjct: 13110131 acacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaa 13110072 Query: 167 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 212 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13110071 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13110026 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 545 aggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatctatc 604 |||| |||||||||||||| ||||||||||||||||| || ||||||||||||||||| | Sbjct: 13101949 aggctttgttcagagctctaaagacaaagcatgctacgccaaagtatggtctcatctacc 13101890 Query: 605 atgc 608 |||| Sbjct: 13101889 atgc 13101886 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 545 aggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatctatc 604 |||| |||||||||||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 13109360 aggctttgttcagagctctcaagacaaaacatgctacgccgaagtatggtctcatttacc 13109301 Query: 605 atgc 608 |||| Sbjct: 13109300 atgc 13109297 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 1 attgtcccacagcttgtctaggtataagctgaagttcagccctgaaa 47 ||||||||||||| ||||||| ||||||||||||||||| ||||||| Sbjct: 13110519 attgtcccacagcctgtctagatataagctgaagttcagtcctgaaa 13110473 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 2 ttgtcccacagcttgtctaggtataagctgaagttcagccctgaaa 47 ||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 13103204 ttgtcccacagtttgtctagatataagctgaagttcagtcctgaaa 13103159
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 47 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 106 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 123762 aggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggagctta 123821 Query: 107 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 166 |||||||||| |||||||| ||||||||||| || ||||||||||| |||||||| |||| Sbjct: 123822 acacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcactaaaa 123881 Query: 167 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 212 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 123882 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 123927 Score = 198 bits (100), Expect = 2e-47 Identities = 235/280 (83%) Strand = Plus / Plus Query: 268 gaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgac 327 |||||| |||| || ||||| || ||||| ||||||||||||||||| | ||| |||||| Sbjct: 124075 gaagcacagctaaaagaggcggcagtaatatccatgggaacagaagttagtgaacttgac 124134 Query: 328 ctctcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcccag 387 | || |||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 124135 ttgctaaatatcagggagctgtgtgatcaggtgttggctctttctgagtacagagcccag 124194 Query: 388 ctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgtt 447 || | ||| ||||| | ||| |||||||| || || || || || ||||||||||||||| Sbjct: 124195 ctgtttgattatctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgtt 124254 Query: 448 ggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggccaag 507 || ||| | ||||| ||||| |||||||||||||| || |||||| | |||||||||||| Sbjct: 124255 ggcgaattggttggtgctcgacttattgcacatggcggcagtttggtaaatctggccaag 124314 Query: 508 caacctggcagcacgattcagattctgggggcagagaagg 547 || ||||||||||| |||||||| || || |||||||||| Sbjct: 124315 cagcctggcagcacaattcagatacttggtgcagagaagg 124354 Score = 168 bits (85), Expect = 1e-38 Identities = 220/265 (83%) Strand = Plus / Plus Query: 283 gaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatcagg 342 ||||| || ||||| ||||||||||||||||| | ||| ||||| | || |||||| Sbjct: 116776 gaggcggcagtaatatccatgggaacagaagttagtgaacttgatttgctaaatatcagg 116835 Query: 343 gaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactatcta 402 || ||||||||||| || |||||||||||||||||||||||||||| | ||| ||||| Sbjct: 116836 gagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattatctg 116895 Query: 403 aaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgttggc 462 | ||| |||||||| || || || || || |||||||||||||| || ||| | ||||| Sbjct: 116896 agaagcaggatgaacactatcgcaccaaatttgactgcacttgtgggcgaattggttggt 116955 Query: 463 gctcgccttattgcacatggtggtagtttgatgaatctggccaagcaacctggcagcacg 522 ||||| ||||||||||| ||||| |||||| | |||||||||||||| || |||||||| Sbjct: 116956 gctcgacttattgcacacggtggcagtttggtaaatctggccaagcagccgggcagcaca 117015 Query: 523 attcagattctgggggcagagaagg 547 |||||||| || || |||||||||| Sbjct: 117016 attcagatacttggtgcagagaagg 117040 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 47 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 106 ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| | Sbjct: 116447 aggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctca 116506 Query: 107 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 166 ||||||| || |||||||| ||||||||||| || |||||||| || |||||||| |||| Sbjct: 116507 acacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaa 116566 Query: 167 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 212 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 116567 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 116612 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 545 aggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatctatc 604 |||| |||||||||||||| ||||||||||||||||| || ||||||||||||||||| | Sbjct: 124689 aggctttgttcagagctctaaagacaaagcatgctacgccaaagtatggtctcatctacc 124748 Query: 605 atgc 608 |||| Sbjct: 124749 atgc 124752 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 545 aggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatctatc 604 |||| |||||||||||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 117278 aggctttgttcagagctctcaagacaaaacatgctacgccgaagtatggtctcatttacc 117337 Query: 605 atgc 608 |||| Sbjct: 117338 atgc 117341 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 1 attgtcccacagcttgtctaggtataagctgaagttcagccctgaaa 47 ||||||||||||| ||||||| ||||||||||||||||| ||||||| Sbjct: 116119 attgtcccacagcctgtctagatataagctgaagttcagtcctgaaa 116165 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 2 ttgtcccacagcttgtctaggtataagctgaagttcagccctgaaa 47 ||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 123434 ttgtcccacagtttgtctagatataagctgaagttcagtcctgaaa 123479
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Minus Query: 47 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 106 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 13099651 aggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggagctta 13099592 Query: 107 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 166 |||||||||| |||||||| ||||||||||| || ||||||||||| |||||||| |||| Sbjct: 13099591 acacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcactaaaa 13099532 Query: 167 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 212 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13099531 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13099486 Score = 198 bits (100), Expect = 2e-47 Identities = 235/280 (83%) Strand = Plus / Minus Query: 268 gaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgac 327 |||||| |||| || ||||| || ||||| ||||||||||||||||| | ||| |||||| Sbjct: 13099338 gaagcacagctaaaagaggcggcagtaatatccatgggaacagaagttagtgaacttgac 13099279 Query: 328 ctctcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcccag 387 | || |||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 13099278 ttgctaaatatcagggagctgtgtgatcaggtgttggctctttctgagtacagagcccag 13099219 Query: 388 ctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgtt 447 || | ||| ||||| | ||| |||||||| || || || || || ||||||||||||||| Sbjct: 13099218 ctgtttgattatctgagaagcaggatgaacactatcgcaccaaatttgactgcacttgtt 13099159 Query: 448 ggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggccaag 507 || ||| | ||||| ||||| |||||||||||||| || |||||| | |||||||||||| Sbjct: 13099158 ggcgaattggttggtgctcgacttattgcacatggcggcagtttggtaaatctggccaag 13099099 Query: 508 caacctggcagcacgattcagattctgggggcagagaagg 547 || ||||||||||| |||||||| || || |||||||||| Sbjct: 13099098 cagcctggcagcacaattcagatacttggtgcagagaagg 13099059 Score = 168 bits (85), Expect = 1e-38 Identities = 220/265 (83%) Strand = Plus / Minus Query: 283 gaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctctcgaacatcagg 342 ||||| || ||||| ||||||||||||||||| | ||| ||||| | || |||||| Sbjct: 13106637 gaggcggcagtaatatccatgggaacagaagttagtgaacttgatttgctaaatatcagg 13106578 Query: 343 gaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctatgactatcta 402 || ||||||||||| || |||||||||||||||||||||||||||| | ||| ||||| Sbjct: 13106577 gagctgtgtgatcaggtgttggctctttctgagtacagagcccagctgtttgattatctg 13106518 Query: 403 aaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaacttgttggc 462 | ||| |||||||| || || || || || |||||||||||||| || ||| | ||||| Sbjct: 13106517 agaagcaggatgaacactatcgcaccaaatttgactgcacttgtgggcgaattggttggt 13106458 Query: 463 gctcgccttattgcacatggtggtagtttgatgaatctggccaagcaacctggcagcacg 522 ||||| ||||||||||| ||||| |||||| | |||||||||||||| || |||||||| Sbjct: 13106457 gctcgacttattgcacacggtggcagtttggtaaatctggccaagcagccgggcagcaca 13106398 Query: 523 attcagattctgggggcagagaagg 547 |||||||| || || |||||||||| Sbjct: 13106397 attcagatacttggtgcagagaagg 13106373 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 47 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 106 ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| | Sbjct: 13106966 aggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctca 13106907 Query: 107 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 166 ||||||| || |||||||| ||||||||||| || |||||||| || |||||||| |||| Sbjct: 13106906 acacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaa 13106847 Query: 167 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 212 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13106846 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13106801 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 545 aggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatctatc 604 |||| |||||||||||||| ||||||||||||||||| || ||||||||||||||||| | Sbjct: 13098724 aggctttgttcagagctctaaagacaaagcatgctacgccaaagtatggtctcatctacc 13098665 Query: 605 atgc 608 |||| Sbjct: 13098664 atgc 13098661 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 545 aggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatctatc 604 |||| |||||||||||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 13106135 aggctttgttcagagctctcaagacaaaacatgctacgccgaagtatggtctcatttacc 13106076 Query: 605 atgc 608 |||| Sbjct: 13106075 atgc 13106072 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 1 attgtcccacagcttgtctaggtataagctgaagttcagccctgaaa 47 ||||||||||||| ||||||| ||||||||||||||||| ||||||| Sbjct: 13107294 attgtcccacagcctgtctagatataagctgaagttcagtcctgaaa 13107248 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 2 ttgtcccacagcttgtctaggtataagctgaagttcagccctgaaa 47 ||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 13099979 ttgtcccacagtttgtctagatataagctgaagttcagtcctgaaa 13099934
>ref|NM_111378.2| Arabidopsis thaliana DNA binding AT3G05060 mRNA, complete cds Length = 2002 Score = 139 bits (70), Expect = 1e-29 Identities = 352/446 (78%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || ||| Sbjct: 598 gatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatggatgg 657 Query: 145 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 204 || ||||||||||| | || || | |||| ||||||| ||||| ||| |||| || Sbjct: 658 cattttcccgagcttgctaagatcatatcagacaatatcctatatgccaaatctgttaaa 717 Query: 205 atgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaagaa 264 ||||||| || || |||||||| | || || |||||||| ||||| || |||| ||| Sbjct: 718 ttgatgggaaaccgagttaatgctgctaagctagacttctccgagatcttagcagatgaa 777 Query: 265 gtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagctt 324 | || ||||| || ||||| |||||||| || ||||||||||||||||||| ||| | Sbjct: 778 attgaggcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgactta 837 Query: 325 gacctctcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcc 384 ||| | | | ||||| | ||||| ||||| || || || ||||||||||||||||||| Sbjct: 838 gacttgttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacagagct 897 Query: 385 cagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcactt 444 ||||| || || || ||||| || || ||||| || |||||||| || ||||||| || Sbjct: 898 cagctttacgattacctaaagagcagaatgaacactattgctcccaatctgactgccctg 957 Query: 445 gttggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggcc 504 || || || |||||||| ||||| |||||| | ||||| |||||||| |||| || || Sbjct: 958 gtaggagagcttgttggtgctcgtcttatttcccatggaggtagtttattgaacctctcc 1017 Query: 505 aagcaacctggcagcacgattcagat 530 ||||||||||| |||||| ||||||| Sbjct: 1018 aagcaacctgggagcacggttcagat 1043
>gb|AY060573.1| Arabidopsis thaliana AT3g05060/T12H1_2 mRNA sequence Length = 1520 Score = 139 bits (70), Expect = 1e-29 Identities = 352/446 (78%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || ||| Sbjct: 598 gatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatggatgg 657 Query: 145 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 204 || ||||||||||| | || || | |||| ||||||| ||||| ||| |||| || Sbjct: 658 cattttcccgagcttgctaagatcatatcagacaatatcctatatgccaaatctgttaaa 717 Query: 205 atgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaagaa 264 ||||||| || || |||||||| | || || |||||||| ||||| || |||| ||| Sbjct: 718 ttgatgggaaaccgagttaatgctgctaagctagacttctccgagatcttagcagatgaa 777 Query: 265 gtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagctt 324 | || ||||| || ||||| |||||||| || ||||||||||||||||||| ||| | Sbjct: 778 attgaggcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgactta 837 Query: 325 gacctctcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcc 384 ||| | | | ||||| | ||||| ||||| || || || ||||||||||||||||||| Sbjct: 838 gacttgttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacagagct 897 Query: 385 cagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcactt 444 ||||| || || || ||||| || || ||||| || |||||||| || ||||||| || Sbjct: 898 cagctttacgattacctaaagagcagaatgaacactattgctcccaatctgactgccctg 957 Query: 445 gttggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggcc 504 || || || |||||||| ||||| |||||| | ||||| |||||||| |||| || || Sbjct: 958 gtaggagagcttgttggtgctcgtcttatttcccatggaggtagtttattgaacctctcc 1017 Query: 505 aagcaacctggcagcacgattcagat 530 ||||||||||| |||||| ||||||| Sbjct: 1018 aagcaacctgggagcacggttcagat 1043
>gb|AF412080.1|AF412080 Arabidopsis thaliana AT3g05060/T12H1_2 mRNA, complete cds Length = 1873 Score = 139 bits (70), Expect = 1e-29 Identities = 352/446 (78%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || ||| Sbjct: 590 gatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatggatgg 649 Query: 145 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 204 || ||||||||||| | || || | |||| ||||||| ||||| ||| |||| || Sbjct: 650 cattttcccgagcttgctaagatcatatcagacaatatcctatatgccaaatctgttaaa 709 Query: 205 atgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaagaa 264 ||||||| || || |||||||| | || || |||||||| ||||| || |||| ||| Sbjct: 710 ttgatgggaaaccgagttaatgctgctaagctagacttctccgagatcttagcagatgaa 769 Query: 265 gtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagctt 324 | || ||||| || ||||| |||||||| || ||||||||||||||||||| ||| | Sbjct: 770 attgaggcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgactta 829 Query: 325 gacctctcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcc 384 ||| | | | ||||| | ||||| ||||| || || || ||||||||||||||||||| Sbjct: 830 gacttgttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacagagct 889 Query: 385 cagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcactt 444 ||||| || || || ||||| || || ||||| || |||||||| || ||||||| || Sbjct: 890 cagctttacgattacctaaagagcagaatgaacactattgctcccaatctgactgccctg 949 Query: 445 gttggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggcc 504 || || || |||||||| ||||| |||||| | ||||| |||||||| |||| || || Sbjct: 950 gtaggagagcttgttggtgctcgtcttatttcccatggaggtagtttattgaacctctcc 1009 Query: 505 aagcaacctggcagcacgattcagat 530 ||||||||||| |||||| ||||||| Sbjct: 1010 aagcaacctgggagcacggttcagat 1035
>gb|AF302491.1|AF302491 Arabidopsis thaliana NOP58-like protein mRNA, complete cds Length = 1602 Score = 139 bits (70), Expect = 1e-29 Identities = 352/446 (78%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || ||| Sbjct: 505 gatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatggatgg 564 Query: 145 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 204 || ||||||||||| | || || | |||| ||||||| ||||| ||| |||| || Sbjct: 565 cattttcccgagcttgctaagatcatatcagacaatatcctatatgccaaatctgttaaa 624 Query: 205 atgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaagaa 264 ||||||| || || |||||||| | || || |||||||| ||||| || |||| ||| Sbjct: 625 ttgatgggaaaccgagttaatgctgctaagctagacttctccgagatcttagcagatgaa 684 Query: 265 gtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagctt 324 | || ||||| || ||||| |||||||| || ||||||||||||||||||| ||| | Sbjct: 685 attgaggcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgactta 744 Query: 325 gacctctcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcc 384 ||| | | | ||||| | ||||| ||||| || || || ||||||||||||||||||| Sbjct: 745 gacttgttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacagagct 804 Query: 385 cagctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcactt 444 ||||| || || || ||||| || || ||||| || |||||||| || ||||||| || Sbjct: 805 cagctttacgattacctaaagagcagaatgaacactattgctcccaatctgactgccctg 864 Query: 445 gttggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggcc 504 || || || |||||||| ||||| |||||| | ||||| |||||||| |||| || || Sbjct: 865 gtaggagagcttgttggtgctcgtcttatttcccatggaggtagtttattgaacctctcc 924 Query: 505 aagcaacctggcagcacgattcagat 530 ||||||||||| |||||| ||||||| Sbjct: 925 aagcaacctgggagcacggttcagat 950
>gb|BT013761.1| Lycopersicon esculentum clone 132644F, mRNA sequence Length = 2206 Score = 131 bits (66), Expect = 3e-27 Identities = 244/302 (80%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 26 aagctgaagttcagccctga-aaggttgatactatgatcattcaggcaattggcttgttg 84 |||||||| || || ||||| ||||| ||||| ||||| | ||||| ||||| |||||| Sbjct: 604 aagctgaaatttagtcctgacaaggtggatacaatgattgtccaggccattggtttgttg 663 Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 ||||||||||| || ||||| ||||| ||||| |||||||| || |||||||| || ||| Sbjct: 664 gatgatcttgataaagagctgaacacctatgcaatgagggtacgagaatggtatggctgg 723 Query: 145 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 204 || ||||| |||||| | || ||||| |||||| |||| ||||||||| || || ||| Sbjct: 724 cattttcctgagctcgcaaagattgtacaagataacatcctttatgctaaggcggttaag 783 Query: 205 atgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaagaa 264 ||||||| | ||||| ||||| | || ||||| |||||||||||||| |||||||| Sbjct: 784 ttgatgggtgaccgtgtcaatgctgcaaagcttgatttctctgagatacttccagaagag 843 Query: 265 gtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagctt 324 || || || || |||| |||||||| | ||||| |||||||| ||||||| ||| ||| Sbjct: 844 gttgaggctgaattgaaagaggcagccatgatttcaatgggaactgaagtcagtgatctt 903 Query: 325 ga 326 || Sbjct: 904 ga 905 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 451 gaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggccaagcaa 510 ||||||||||| |||||||||||||| |||||||| || |||| ||||| || || ||| Sbjct: 1030 gaacttgttggagctcgccttattgcgcatggtggcagcttgacaaatcttgcgaaacaa 1089 Query: 511 cctggcagcacgattcagattctgggggcagagaaggcgttgttcagagctctgaagaca 570 ||||| || || | ||||| || || ||||| |||||| | || |||||| | ||||| Sbjct: 1090 cctggaagtacagtacagatacttggtgcagaaaaggcgctctttagagctttaaagacg 1149 Query: 571 aagcatgctacaccgaagta 590 ||||||||||| || ||||| Sbjct: 1150 aagcatgctactcccaagta 1169
>gb|AF061962.1|AF061962 Pisum sativum SAR DNA-binding protein (SARBP-1) mRNA, complete cds Length = 1952 Score = 127 bits (64), Expect = 5e-26 Identities = 166/200 (83%) Strand = Plus / Plus Query: 349 tgtgatcaagtcctggctctttctgagtacagagcccagctctatgactatctaaaaagt 408 |||||||| || ||| ||||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 788 tgtgatcaggttctgtctctttcagaatacagagctcagctctatgattatctaaagagt 847 Query: 409 aggatgaataccattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgc 468 |||||||| |||||||| ||||| |||||||| | ||||| || |||||||| |||||| Sbjct: 848 aggatgaacaccattgcacctaatttgactgctatggttggggagcttgttggtgctcgc 907 Query: 469 cttattgcacatggtggtagtttgatgaatctggccaagcaacctggcagcacgattcag 528 || ||||| ||||| ||||| || || ||||| || ||||| ||||| || || | ||| Sbjct: 908 ctcattgcccatgggggtagcttaattaatcttgcaaagcagcctggtagtaccgtgcag 967 Query: 529 attctgggggcagagaaggc 548 ||||| || || |||||||| Sbjct: 968 attcttggtgctgagaaggc 987 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 ||||||||||| || ||| | || || ||||| ||||||||||| |||||||| |||||| Sbjct: 524 gatgatcttgataaagagttgaatacgtatgccatgagggtccgagaatggtatggttgg 583 Query: 145 cactttcc 152 || ||||| Sbjct: 584 cattttcc 591
>dbj|AB059832.1| Nicotiana tabacum MARBPF mRNA for MAR-binding protein, complete cds Length = 1919 Score = 123 bits (62), Expect = 7e-25 Identities = 234/290 (80%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 26 aagctgaagttcagccctga-aaggttgatactatgatcattcaggcaattggcttgttg 84 ||||| ||||| |||||||| ||||| ||||| ||||| | || || ||| |||||||| Sbjct: 502 aagctaaagtttagccctgacaaggtggatacgatgattgtacaagccattagcttgttg 561 Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 ||||| ||||| || ||||| ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 562 gatgaccttgataaagagctaaacacatatgccatgagggtccgagaatggtacggttgg 621 Query: 145 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 204 || ||||| ||||| | || ||||| |||||| || | ||||| || ||||||||| Sbjct: 622 cattttccggagcttgcaaagattgtacaagataacattctatatgccaaggctgtgaag 681 Query: 205 atgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagatactaccagaagaa 264 |||||||| | ||||| ||||| | || || || |||||||||||||| |||||||| Sbjct: 682 ttgatgggcgaccgtgtaaatgcggcaaagctggatttctctgagatactgccagaagag 741 Query: 265 gtggaagcagagctgaaggaggcagctgtaatttccatgggaacagaagt 314 || || ||||| |||| |||||| | | ||||||||||| || ||||| Sbjct: 742 gttgaggcagaattgaaagaggcatccatgatttccatggggactgaagt 791 Score = 75.8 bits (38), Expect = 2e-10 Identities = 128/158 (81%) Strand = Plus / Plus Query: 451 gaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggccaagcaa 510 ||||||||||| ||||| |||||||| ||||| ||||| ||| ||||||| || |||||| Sbjct: 928 gaacttgttggtgctcggcttattgcccatggcggtagcttgttgaatcttgcaaagcaa 987 Query: 511 cctggcagcacgattcagattctgggggcagagaaggcgttgttcagagctctgaagaca 570 ||||| || || ||||||| || || || || ||||| | ||||||||| | ||||| Sbjct: 988 cctggaagtacagttcagatacttggtgctgaaaaggctcttttcagagctttaaagacg 1047 Query: 571 aagcatgctacaccgaagtatggtctcatctatcatgc 608 |||||||| || ||||| || || || || |||||||| Sbjct: 1048 aagcatgcaactccgaaatacgggcttatatatcatgc 1085
>emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p17, COMPLETE SEQUENCE Length = 109575 Score = 121 bits (61), Expect = 3e-24 Identities = 202/249 (81%) Strand = Plus / Plus Query: 365 ctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaataccattg 424 ||||||| || |||||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 32361 ctctttcagaatacagagctcagctctatgattatctaaagagtaggatgaataccattg 32420 Query: 425 ctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgcacatggtg 484 | || || |||||||| | ||||| || |||||||| |||||||| ||||| ||||| | Sbjct: 32421 cacccaatttgactgctatggttggggagcttgttggtgctcgcctcattgcccatggcg 32480 Query: 485 gtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggggcagaga 544 |||| || || ||||| || ||||| ||||| || || | |||||||| || || |||| Sbjct: 32481 gtagcttaataaatcttgcaaagcagcctggtagtaccgtgcagattcttggtgctgaga 32540 Query: 545 aggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatctatc 604 |||| | || || || | ||||| || |||||||| || || |||||||| || |||| Sbjct: 32541 aggctctctttagggcattaaagactaaacatgctactcccaaatatggtcttatatatc 32600 Query: 605 atgcttcat 613 |||| |||| Sbjct: 32601 atgcatcat 32609
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete sequence Length = 140064 Score = 111 bits (56), Expect = 3e-21 Identities = 209/260 (80%) Strand = Plus / Minus Query: 271 gcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgacctc 330 ||||| || ||||| |||||||| || ||||||||||||||||||| ||| | ||| | Sbjct: 10315 gcagatcttaaggacgcagctgtgatatccatgggaacagaagtcagtgacttagacttg 10256 Query: 331 tcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcccagctc 390 | | ||||| | ||||| ||||| || || || ||||||||||||||||||| ||||| Sbjct: 10255 ttgcacatccgtgaactctgtgaccaggttctctctctttctgagtacagagctcagctt 10196 Query: 391 tatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgttggt 450 || || || ||||| || || ||||| || |||||||| || ||||||| || || || Sbjct: 10195 tacgattacctaaagagcagaatgaacactattgctcccaatctgactgccctggtagga 10136 Query: 451 gaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggccaagcaa 510 || |||||||| ||||| |||||| | ||||| |||||||| |||| || |||||||| Sbjct: 10135 gagcttgttggtgctcgtcttatttcccatggaggtagtttattgaacctctccaagcaa 10076 Query: 511 cctggcagcacgattcagat 530 ||||| |||||| ||||||| Sbjct: 10075 cctgggagcacggttcagat 10056 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || ||| Sbjct: 10594 gatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatggatgg 10535 Query: 145 cactttcccgagct 158 || ||||||||||| Sbjct: 10534 cattttcccgagct 10521
>emb|AJ580824.1|LCO580824 Lotus corniculatus var. japonicus har1 gene and genes for transcription factor homolog BTF3-like protein, S-receptor kinase-like protein 1, S-receptor kinase-like protein 2, S-receptor kinase-like protein 3 and SAR DNA-binding protein-like protein Length = 46304 Score = 111 bits (56), Expect = 3e-21 Identities = 188/232 (81%) Strand = Plus / Minus Query: 365 ctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaataccattg 424 ||||||| || || ||||| || |||||||| ||||| || ||||||||||| |||||| Sbjct: 41096 ctctttcagaatatagagctcaactctatgattatctgaagagtaggatgaactccattg 41037 Query: 425 ctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgcacatggtg 484 | || || |||||||| |||||||| || |||||||| || ||||| ||||| ||||||| Sbjct: 41036 cacccaatttgactgctcttgttggggagcttgttggtgcccgcctcattgcccatggtg 40977 Query: 485 gtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggggcagaga 544 | || || || |||||||| ||||| ||||| || || | |||||||| || || |||| Sbjct: 40976 gcagcttaataaatctggcaaagcagcctggtagtactgtgcagattcttggtgctgaga 40917 Query: 545 aggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtct 596 |||| | || || || || ||||| ||||||||||| || ||||||||||| Sbjct: 40916 aggctctctttagggcacttaagaccaagcatgctactcccaagtatggtct 40865 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 ||||||||||| |||||| | || || || || |||||||| || |||||||| |||||| Sbjct: 41646 gatgatcttgataaggagttgaatacatacgccatgagggttcgagaatggtatggttgg 41587 Query: 145 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 204 || ||||| ||||| || ||||| || ||||| ||||| |||||||| || || || Sbjct: 41586 cattttccagagcttaccaaaatcattcaggataacatccaatatgctaaggcagtcaaa 41527 Query: 205 atgatgggcaatcgtgttaatgc 227 ||||||| ||||||||||||| Sbjct: 41526 ttgatgggtgatcgtgttaatgc 41504
>gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete sequence Length = 146189 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 47 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 106 |||| |||||||||||| ||||||| ||||| ||| | ||||||||||| || ||||| | Sbjct: 126457 aggtggatactatgatcgttcaggctattggtttgcttgatgatcttgataaagagctga 126516 Query: 107 acacttatgctatgagggtccgtgaatggtacggttggcactttcc 152 |||| ||||| |||||||| ||||||||||| |||||||| ||||| Sbjct: 126517 acacgtatgccatgagggttcgtgaatggtatggttggcattttcc 126562 Score = 97.6 bits (49), Expect = 4e-17 Identities = 187/233 (80%) Strand = Plus / Plus Query: 376 tacagagcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttg 435 |||||||| || |||||||| ||||| || ||||||||||| |||||||| || || ||| Sbjct: 127021 tacagagctcaactctatgattatctcaagagtaggatgaacaccattgcacccaatttg 127080 Query: 436 actgcacttgttggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatg 495 ||||| | ||||| || |||||||| ||||| || ||||| ||||| || || | || Sbjct: 127081 actgctatggttggggagcttgttggtgctcgactcattgcccatggaggaagcctaata 127140 Query: 496 aatctggccaagcaacctggcagcacgattcagattctgggggcagagaaggcgttgttc 555 ||||| || ||||| ||||| || || | |||||||| || || ||||| || | || Sbjct: 127141 aatcttgcaaagcagcctggtagtactgtgcagattcttggtgctgagaaagctcttttt 127200 Query: 556 agagctctgaagacaaagcatgctacaccgaagtatggtctcatctatcatgc 608 ||||| |||||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 127201 agagcactgaagactaagcatgcaactccaaagtatggtctcatctaccatgc 127253
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 47 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 106 |||| |||||||||||| ||||||| ||||| ||| | ||||||||||| || ||||| | Sbjct: 115311 aggtggatactatgatcgttcaggctattggtttgcttgatgatcttgataaagagctga 115252 Query: 107 acacttatgctatgagggtccgtgaatggtacggttggcactttcc 152 |||| ||||| |||||||| ||||||||||| |||||||| ||||| Sbjct: 115251 acacgtatgccatgagggttcgtgaatggtatggttggcattttcc 115206 Score = 97.6 bits (49), Expect = 4e-17 Identities = 187/233 (80%) Strand = Plus / Minus Query: 376 tacagagcccagctctatgactatctaaaaagtaggatgaataccattgctcctaacttg 435 |||||||| || |||||||| ||||| || ||||||||||| |||||||| || || ||| Sbjct: 114747 tacagagctcaactctatgattatctcaagagtaggatgaacaccattgcacccaatttg 114688 Query: 436 actgcacttgttggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatg 495 ||||| | ||||| || |||||||| ||||| || ||||| ||||| || || | || Sbjct: 114687 actgctatggttggggagcttgttggtgctcgactcattgcccatggaggaagcctaata 114628 Query: 496 aatctggccaagcaacctggcagcacgattcagattctgggggcagagaaggcgttgttc 555 ||||| || ||||| ||||| || || | |||||||| || || ||||| || | || Sbjct: 114627 aatcttgcaaagcagcctggtagtactgtgcagattcttggtgctgagaaagctcttttt 114568 Query: 556 agagctctgaagacaaagcatgctacaccgaagtatggtctcatctatcatgc 608 ||||| |||||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 114567 agagcactgaagactaagcatgcaactccaaagtatggtctcatctaccatgc 114515
>ref|NM_122594.2| Arabidopsis thaliana DNA binding AT5G27120 mRNA, complete cds Length = 1856 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||| Sbjct: 569 gatgatcttgacaaagagcttaacacttacgctatgagggttcgtgaatggtttggttgg 628 Query: 145 cactttcccgagct 158 || ||||| ||||| Sbjct: 629 cattttcctgagct 642 Score = 73.8 bits (37), Expect = 6e-10 Identities = 277/357 (77%) Strand = Plus / Plus Query: 238 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 297 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 722 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 781 Query: 298 tccatgggaacagaagtcaatgagcttgacctctcgaacatcagggaactgtgtgatcaa 357 || |||||||| ||||||| ||| ||||| | | | ||||| | ||||| ||||| || Sbjct: 782 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 841 Query: 358 gtcctggctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaat 417 || || ||||| | ||||||||||| ||||| |||||||| | || || || ||||| Sbjct: 842 gttctttctcttgccgagtacagagctcagctttatgactacttgaagagcagaatgaac 901 Query: 418 accattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgca 477 || ||||| || || | ||||| ||||| || || || || || |||||| | || | Sbjct: 902 acaattgcaccaaatctaactgcccttgtcggggagctagtcggtgctcgcttaatatct 961 Query: 478 catggtggtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggg 537 || |||||||||||| |||| || || ||||||||||| |||||| |||||||||| || Sbjct: 962 cacggtggtagtttgttgaacctcgcaaagcaacctggaagcacggttcagattcttgga 1021 Query: 538 gcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggt 594 || || || || || || ||||| || ||||| || || ||||| || ||||||||| Sbjct: 1022 gctgaaaaagccttatttagagcccttaagaccaaacacgctactccaaagtatggt 1078
>gb|AY096684.1| Arabidopsis thaliana putative SAR DNA-binding protein (At5g27120) mRNA, complete cds Length = 1633 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||| Sbjct: 502 gatgatcttgacaaagagcttaacacttacgctatgagggttcgtgaatggtttggttgg 561 Query: 145 cactttcccgagct 158 || ||||| ||||| Sbjct: 562 cattttcctgagct 575 Score = 73.8 bits (37), Expect = 6e-10 Identities = 277/357 (77%) Strand = Plus / Plus Query: 238 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 297 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 655 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 714 Query: 298 tccatgggaacagaagtcaatgagcttgacctctcgaacatcagggaactgtgtgatcaa 357 || |||||||| ||||||| ||| ||||| | | | ||||| | ||||| ||||| || Sbjct: 715 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 774 Query: 358 gtcctggctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaat 417 || || ||||| | ||||||||||| ||||| |||||||| | || || || ||||| Sbjct: 775 gttctttctcttgccgagtacagagctcagctttatgactacttgaagagcagaatgaac 834 Query: 418 accattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgca 477 || ||||| || || | ||||| ||||| || || || || || |||||| | || | Sbjct: 835 acaattgcaccaaatctaactgcccttgtcggggagctagtcggtgctcgcttaatatct 894 Query: 478 catggtggtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggg 537 || |||||||||||| |||| || || ||||||||||| |||||| |||||||||| || Sbjct: 895 cacggtggtagtttgttgaacctcgcaaagcaacctggaagcacggttcagattcttgga 954 Query: 538 gcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggt 594 || || || || || || ||||| || ||||| || || ||||| || ||||||||| Sbjct: 955 gctgaaaaagccttatttagagcccttaagaccaaacacgctactccaaagtatggt 1011
>gb|AY074281.1| Arabidopsis thaliana putative SAR DNA-binding protein (At5g27120) mRNA, complete cds Length = 1856 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||| Sbjct: 569 gatgatcttgacaaagagcttaacacttacgctatgagggttcgtgaatggtttggttgg 628 Query: 145 cactttcccgagct 158 || ||||| ||||| Sbjct: 629 cattttcctgagct 642 Score = 73.8 bits (37), Expect = 6e-10 Identities = 277/357 (77%) Strand = Plus / Plus Query: 238 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 297 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 722 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 781 Query: 298 tccatgggaacagaagtcaatgagcttgacctctcgaacatcagggaactgtgtgatcaa 357 || |||||||| ||||||| ||| ||||| | | | ||||| | ||||| ||||| || Sbjct: 782 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 841 Query: 358 gtcctggctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaat 417 || || ||||| | ||||||||||| ||||| |||||||| | || || || ||||| Sbjct: 842 gttctttctcttgccgagtacagagctcagctttatgactacttgaagagcagaatgaac 901 Query: 418 accattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgca 477 || ||||| || || | ||||| ||||| || || || || || |||||| | || | Sbjct: 902 acaattgcaccaaatctaactgcccttgtcggggagctagtcggtgctcgcttaatatct 961 Query: 478 catggtggtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggg 537 || |||||||||||| |||| || || ||||||||||| |||||| |||||||||| || Sbjct: 962 cacggtggtagtttgttgaacctcgcaaagcaacctggaagcacggttcagattcttgga 1021 Query: 538 gcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggt 594 || || || || || || ||||| || ||||| || || ||||| || ||||||||| Sbjct: 1022 gctgaaaaagccttatttagagcccttaagaccaaacacgctactccaaagtatggt 1078
>gb|AF302490.1|AF302490 Arabidopsis thaliana NOP58-like protein F108 mRNA, complete cds Length = 1781 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||| Sbjct: 502 gatgatcttgacaaagagcttaacacttacgctatgagggttcgtgaatggtttggttgg 561 Query: 145 cactttcccgagct 158 || ||||| ||||| Sbjct: 562 cattttcctgagct 575 Score = 73.8 bits (37), Expect = 6e-10 Identities = 277/357 (77%) Strand = Plus / Plus Query: 238 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 297 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 655 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 714 Query: 298 tccatgggaacagaagtcaatgagcttgacctctcgaacatcagggaactgtgtgatcaa 357 || |||||||| ||||||| ||| ||||| | | | ||||| | ||||| ||||| || Sbjct: 715 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 774 Query: 358 gtcctggctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaat 417 || || ||||| | ||||||||||| ||||| |||||||| | || || || ||||| Sbjct: 775 gttctttctcttgccgagtacagagctcagctttatgactacttgaagagcagaatgaac 834 Query: 418 accattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgca 477 || ||||| || || | ||||| ||||| || || || || || |||||| | || | Sbjct: 835 acaattgcaccaaatctaactgcccttgtcggggagctagtcggtgctcgcttaatatct 894 Query: 478 catggtggtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggg 537 || |||||||||||| |||| || || ||||||||||| |||||| |||||||||| || Sbjct: 895 cacggtggtagtttgttgaacctcgcaaagcaacctggaagcacggttcagattcttgga 954 Query: 538 gcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggt 594 || || || || || || ||||| || ||||| || || ||||| || ||||||||| Sbjct: 955 gctgaaaaagccttatttagagcccttaagaccaaacacgctactccaaagtatggt 1011
>gb|BT002060.1| Arabidopsis thaliana SAR DNA-binding protein - like (At5g27120) mRNA, partial cds Length = 1351 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||| Sbjct: 584 gatgatcttgacaaagagcttaacacttacgctatgagggttcgtgaatggtttggttgg 643 Query: 145 cactttcccgagct 158 || ||||| ||||| Sbjct: 644 cattttcctgagct 657 Score = 73.8 bits (37), Expect = 6e-10 Identities = 277/357 (77%) Strand = Plus / Plus Query: 238 gacttctctgagatactaccagaagaagtggaagcagagctgaaggaggcagctgtaatt 297 ||||||||||||||| | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct: 737 gacttctctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgata 796 Query: 298 tccatgggaacagaagtcaatgagcttgacctctcgaacatcagggaactgtgtgatcaa 357 || |||||||| ||||||| ||| ||||| | | | ||||| | ||||| ||||| || Sbjct: 797 tctatgggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccag 856 Query: 358 gtcctggctctttctgagtacagagcccagctctatgactatctaaaaagtaggatgaat 417 || || ||||| | ||||||||||| ||||| |||||||| | || || || ||||| Sbjct: 857 gttctttctcttgccgagtacagagctcagctttatgactacttgaagagcagaatgaac 916 Query: 418 accattgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgca 477 || ||||| || || | ||||| ||||| || || || || || |||||| | || | Sbjct: 917 acaattgcaccaaatctaactgcccttgtcggggagctagtcggtgctcgcttaatatct 976 Query: 478 catggtggtagtttgatgaatctggccaagcaacctggcagcacgattcagattctgggg 537 || |||||||||||| |||| || || ||||||||||| |||||| |||||||||| || Sbjct: 977 cacggtggtagtttgttgaacctcgcaaagcaacctggaagcacggttcagattcttgga 1036 Query: 538 gcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggt 594 || || || || || || ||||| || ||||| || || ||||| || ||||||||| Sbjct: 1037 gctgaaaaagccttatttagagcccttaagaccaaacacgctactccaaagtatggt 1093
>gb|AF007271.1|TM021B04 Arabidopsis thaliana BAC TM021B04 Length = 90019 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||| Sbjct: 80028 gatgatcttgacaaagagcttaacacttacgctatgagggttcgtgaatggtttggttgg 79969 Query: 145 cactttcccgagct 158 || ||||| ||||| Sbjct: 79968 cattttcctgagct 79955 Score = 69.9 bits (35), Expect = 9e-09 Identities = 254/327 (77%) Strand = Plus / Minus Query: 268 gaagcagagctgaaggaggcagctgtaatttccatgggaacagaagtcaatgagcttgac 327 |||||||| ||||| ||||| ||||| || || |||||||| ||||||| ||| ||||| Sbjct: 79758 gaagcagaactgaaagaggctgctgtgatatctatgggaactgaagtcagtgaccttgat 79699 Query: 328 ctctcgaacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcccag 387 | | | ||||| | ||||| ||||| || || || ||||| | ||||||||||| ||| Sbjct: 79698 ttattgcacatccgagaactctgtgaccaggttctttctcttgccgagtacagagctcag 79639 Query: 388 ctctatgactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgtt 447 || |||||||| | || || || ||||| || ||||| || || | ||||| ||||| Sbjct: 79638 ctttatgactacttgaagagcagaatgaacacaattgcaccaaatctaactgcccttgtc 79579 Query: 448 ggtgaacttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggccaag 507 || || || || || |||||| | || | || |||||||||||| |||| || || ||| Sbjct: 79578 ggggagctagtcggtgctcgcttaatatctcacggtggtagtttgttgaacctcgcaaag 79519 Query: 508 caacctggcagcacgattcagattctgggggcagagaaggcgttgttcagagctctgaag 567 |||||||| |||||| |||||||||| || || || || || || || ||||| || ||| Sbjct: 79518 caacctggaagcacggttcagattcttggagctgaaaaagccttatttagagcccttaag 79459 Query: 568 acaaagcatgctacaccgaagtatggt 594 || || || ||||| || ||||||||| Sbjct: 79458 accaaacacgctactccaaagtatggt 79432 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| |||||||||||||| ||| ||| || |||||| |||||||| | Sbjct: 73003 gatgatcttgacaaagagcttaacacttacactacgagcgtttgtgaattgtacggtttg 72944 Query: 145 cactttcccgagct 158 || ||||||||||| Sbjct: 72943 cattttcccgagct 72930
>ref|XM_788485.1| PREDICTED: Strongylocentrotus purpuratus similar to nucleolar protein 5 (LOC588821), mRNA Length = 963 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 491 tgatgaatctggccaagcaacctggcagcacgattcagattctgggggcagagaaggcgt 550 ||||||||||||||||||| || | | ||| |||||||||| || ||||||||||| | Sbjct: 488 tgatgaatctggccaagcatcccgcctccaccgttcagattcttggagcagagaaggcct 547 Query: 551 tgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatctatcatgc 608 ||||||| || || ||||| ||| | | ||||| ||||||||||||||||| ||||| Sbjct: 548 tgttcagggcactcaagaccaagaaagacacacccaagtatggtctcatctaccatgc 605
>ref|XM_776365.1| PREDICTED: Strongylocentrotus purpuratus similar to nucleolar protein 5 (LOC576016), mRNA Length = 1444 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 491 tgatgaatctggccaagcaacctggcagcacgattcagattctgggggcagagaaggcgt 550 ||||||||||||||||||| || | | ||| ||||||| || || || |||||||| | Sbjct: 957 tgatgaatctggccaagcatcccgcctccaccgttcagatccttggagctgagaaggcct 1016 Query: 551 tgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatcta 602 |||||||||| |||||||| ||| | | ||||| ||||||||||||||||| Sbjct: 1017 tgttcagagcactgaagaccaagaaagacacacccaagtatggtctcatcta 1068
>gb|AF061963.1|AF061963 Pisum sativum SAR DNA-binding protein (SARBP-2) mRNA, complete cds Length = 1953 Score = 69.9 bits (35), Expect = 9e-09 Identities = 215/275 (78%) Strand = Plus / Plus Query: 334 aacatcagggaactgtgtgatcaagtcctggctctttctgagtacagagcccagctctat 393 ||||| || ||||| |||||||| || || ||||||| || ||||| || || |||||| Sbjct: 872 aacattagagaactctgtgatcaggttttgtctctttcagaatacagggcacaactctat 931 Query: 394 gactatctaaaaagtaggatgaataccattgctcctaacttgactgcacttgttggtgaa 453 || ||||| || ||||||||||| ||||| || || || |||||||| | ||||| || Sbjct: 932 gattatctcaagagtaggatgaacaccatagcgcccaatttgactgctatggttggggag 991 Query: 454 cttgttggcgctcgccttattgcacatggtggtagtttgatgaatctggccaagcaacct 513 ||||| || ||||| || ||||| || |||||||| || | ||||| || ||||| ||| Sbjct: 992 cttgtcggtgctcgtctcattgcccacggtggtagcttattaaatcttgcaaagcagcct 1051 Query: 514 ggcagcacgattcagattctgggggcagagaaggcgttgttcagagctctgaagacaaag 573 || || || | |||||||| || || |||||||| | || || || || ||||| || Sbjct: 1052 ggtagtactgtgcagattcttggtgccgagaaggctctttttagggcacttaagactaaa 1111 Query: 574 catgctacaccgaagtatggtctcatctatcatgc 608 ||||| || || |||||||||||||| || ||||| Sbjct: 1112 catgccactccaaagtatggtctcatttaccatgc 1146 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 46 aaggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctt 105 ||||| |||||||||||| | || || ||||| || | ||||||||||| || || || Sbjct: 584 aaggtggatactatgatcgtccaagctattggtttactcgatgatcttgataaagaactg 643 Query: 106 aacacttatgctatgagggtccgtgaatggtacggttggcactttcc 152 ||||| ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 644 aacacctatgccatgagagttcgtgagtggtatggttggcattttcc 690
>ref|NM_122596.1| Arabidopsis thaliana DNA binding AT5G27140 mRNA, complete cds Length = 1338 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||| |||||||||||||| ||| ||| || |||||| |||||||| | Sbjct: 412 gatgatcttgacaaagagcttaacacttacactacgagcgtttgtgaattgtacggtttg 471 Query: 145 cactttcccgagct 158 || ||||||||||| Sbjct: 472 cattttcccgagct 485
>emb|AL138854.1|SPAC23G3 S.pombe chromosome I cosmid c23G3 Length = 41181 Score = 65.9 bits (33), Expect = 1e-07 Identities = 152/189 (80%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 421 attgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgcacat 480 ||||| || ||||||||||| || || ||||| | ||||| ||||| |||||||| ||| Sbjct: 25113 attgcccccaacttgactgctctggtaggtgagttggttggtgctcgtcttattgctcat 25172 Query: 481 ggtggtagtttgatgaatctggccaagcaacctggcagc-acgattcagattctgggggc 539 | |||| | |||||||| ||||||||||||| ||| | || || || ||| |||| || Sbjct: 25173 gctggttctctgatgaatttggccaagcaacc-ggcttctacaatacaaattttgggagc 25231 Query: 540 agagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcat 599 |||||||| || ||| | ||| |||||||||||||| |||||| || |||||||| || Sbjct: 25232 tgagaaggctttattccgtgctttgaagacaaagcatagtacacctaaatatggtcttat 25291 Query: 600 ctatcatgc 608 |||||||| Sbjct: 25292 ttatcatgc 25300
>ref|NM_001018503.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC23G3.06), partial mRNA Length = 1527 Score = 65.9 bits (33), Expect = 1e-07 Identities = 152/189 (80%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 421 attgctcctaacttgactgcacttgttggtgaacttgttggcgctcgccttattgcacat 480 ||||| || ||||||||||| || || ||||| | ||||| ||||| |||||||| ||| Sbjct: 847 attgcccccaacttgactgctctggtaggtgagttggttggtgctcgtcttattgctcat 906 Query: 481 ggtggtagtttgatgaatctggccaagcaacctggcagc-acgattcagattctgggggc 539 | |||| | |||||||| ||||||||||||| ||| | || || || ||| |||| || Sbjct: 907 gctggttctctgatgaatttggccaagcaacc-ggcttctacaatacaaattttgggagc 965 Query: 540 agagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcat 599 |||||||| || ||| | ||| |||||||||||||| |||||| || |||||||| || Sbjct: 966 tgagaaggctttattccgtgctttgaagacaaagcatagtacacctaaatatggtcttat 1025 Query: 600 ctatcatgc 608 |||||||| Sbjct: 1026 ttatcatgc 1034
>ref|XM_370511.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG07008.4) partial mRNA Length = 1878 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 526 cagattctgggggcagagaaggcgttgttcagagctctgaagacaaagcatgctacaccg 585 |||||||| || || |||||||| |||||| | ||||| ||||| ||||| || ||||| Sbjct: 964 cagattctcggtgccgagaaggcattgttccgtgctctcaagactaagcacgccacaccc 1023 Query: 586 aagtatggtctcatcta 602 ||||| ||||||||||| Sbjct: 1024 aagtacggtctcatcta 1040 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 82 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggt 141 ||||||||||||||||||||||| ||||| || |||||| | ||| || |||||||| Sbjct: 520 ttggatgatcttgacaaggagctgaacacgtacgctatgcgcgtcaaggagtggtacggc 579 Query: 142 tggcactttcccgagct 158 |||||||| || ||||| Sbjct: 580 tggcacttccctgagct 596
>ref|XM_421942.1| PREDICTED: Gallus gallus similar to Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58) (HSPC120) (LOC424087), mRNA Length = 1947 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 130 gaatggtacggttggcactttcccgagct 158 ||||||||||||||||||||||||||||| Sbjct: 635 gaatggtacggttggcactttcccgagct 663 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 atttccatgggaacagaagt 314 |||||||||||||||||||| Sbjct: 800 atttccatgggaacagaagt 819
>ref|XM_968327.1| PREDICTED: Tribolium castaneum similar to CG10206-PA (LOC662214), mRNA Length = 1766 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 130 gaatggtacggttggcactttcccgagct 158 ||||||||||||||||||||||||||||| Sbjct: 651 gaatggtacggttggcactttcccgagct 679
>gb|AY950659.1| Euglena gracilis Nop58p mRNA, partial cds Length = 1232 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggt 125 |||||| | ||||||||||| |||||||||||||||||||| Sbjct: 458 gatgatttggacaaggagctcaacacttatgctatgagggt 498
>emb|BX935105.1| Gallus gallus finished cDNA, clone ChEST73m23 Length = 1953 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 130 gaatggtacggttggcactttcccgagct 158 ||||||||||||||||||||||||||||| Sbjct: 636 gaatggtacggttggcactttcccgagct 664 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 atttccatgggaacagaagt 314 |||||||||||||||||||| Sbjct: 801 atttccatgggaacagaagt 820
>ref|XM_815190.1| Trypanosoma cruzi strain CL Brener nucleolar RNA binding protein (Tc00.1047053508277.230) partial mRNA Length = 1491 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 88 gatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcac 147 ||||||||||||||| |||||| || || ||| ||| ||| || |||||||| ||||| Sbjct: 643 gatcttgacaaggagattaacaaatacgcgatgcgggcccgagagtggtacggatggcat 702 Query: 148 tttcccgagct 158 ||||||||||| Sbjct: 703 tttcccgagct 713
>ref|XM_757287.1| Ustilago maydis 521 hypothetical protein (UM06233.1) partial mRNA Length = 1572 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 58 atgatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgct 117 |||||||||||||| |||| ||| | || |||||||||||| ||||||||| | | Sbjct: 508 atgatcattcaggcgattgctttgctcgacactcttgacaaggacgttaacactttttcc 567 Query: 118 atgagggtccgtgaatggtacggttggcactttcccga 155 ||| | || || ||||||||||| |||||||||||||| Sbjct: 568 atgcgtgttcgcgaatggtacggctggcactttcccga 605
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 419 ccattgctcctaacttgactgcacttgttggtgaacttgttggcgc 464 ||||||| |||||||||||||| |||||||| ||| | |||||||| Sbjct: 2045652 ccattgcgcctaacttgactgctcttgttggcgaattggttggcgc 2045607
>ref|NM_058064.3| Drosophila melanogaster nop5 CG10206-RA (nop5), mRNA Length = 1815 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 133 tggtacggttggcactttcccgagct 158 |||||||||||||||||||||||||| Sbjct: 689 tggtacggttggcactttcccgagct 714
>gb|AY061401.1| Drosophila melanogaster LD32943 full length cDNA Length = 1810 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 133 tggtacggttggcactttcccgagct 158 |||||||||||||||||||||||||| Sbjct: 669 tggtacggttggcactttcccgagct 694
>gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27B-27C, BAC clone BACR20B21, complete sequence Length = 166512 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 133 tggtacggttggcactttcccgagct 158 |||||||||||||||||||||||||| Sbjct: 54771 tggtacggttggcactttcccgagct 54796
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR13J07, complete sequence Length = 174287 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 133 tggtacggttggcactttcccgagct 158 |||||||||||||||||||||||||| Sbjct: 24915 tggtacggttggcactttcccgagct 24890
>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete sequence Length = 270751 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 133 tggtacggttggcactttcccgagct 158 |||||||||||||||||||||||||| Sbjct: 161409 tggtacggttggcactttcccgagct 161384
>gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 DS01321 (D143)), complete sequence Length = 82849 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 133 tggtacggttggcactttcccgagct 158 |||||||||||||||||||||||||| Sbjct: 12847 tggtacggttggcactttcccgagct 12872
>emb|AJ249465.1|DME249465 Drosophila melanogaster mRNA for DNop5 protein (Dnop5 gene) Length = 1817 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 133 tggtacggttggcactttcccgagct 158 |||||||||||||||||||||||||| Sbjct: 677 tggtacggttggcactttcccgagct 702
>ref|XM_516036.1| PREDICTED: Pan troglodytes similar to Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58) (HSPC120) (LOC459883), mRNA Length = 2785 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 2171 aagtatggtctcatttatcatgcttca 2197
>ref|NM_015934.3| Homo sapiens nucleolar protein NOP5/NOP58 (NOP5/NOP58), mRNA Length = 1979 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1159 aagtatggtctcatttatcatgcttca 1185
>ref|XM_872827.1| PREDICTED: Bos taurus similar to Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58), transcript variant 8 (LOC507155), mRNA Length = 2067 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1210 aagtatggtctcatttatcatgcttca 1236
>ref|XM_864285.1| PREDICTED: Bos taurus similar to Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58), transcript variant 4 (LOC507155), mRNA Length = 2032 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1210 aagtatggtctcatttatcatgcttca 1236
>ref|XM_872626.1| PREDICTED: Bos taurus similar to Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58), transcript variant 7 (LOC507155), mRNA Length = 2039 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1210 aagtatggtctcatttatcatgcttca 1236
>ref|XM_872527.1| PREDICTED: Bos taurus similar to Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58), transcript variant 6 (LOC507155), mRNA Length = 1288 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 431 aagtatggtctcatttatcatgcttca 457
>ref|XM_368011.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07915.4) partial mRNA Length = 1545 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 130 gaatggtacggttggcactttcccgagctca 160 ||||||||||| |||||||| |||||||||| Sbjct: 598 gaatggtacggctggcacttccccgagctca 628
>ref|XM_844499.1| PREDICTED: Canis familiaris similar to nucleolar protein 5, transcript variant 1 (LOC607667), mRNA Length = 2030 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1204 aagtatggtctcatttatcatgcttca 1230
>ref|XM_854035.1| PREDICTED: Canis familiaris similar to nucleolar protein 5, transcript variant 6 (LOC607667), mRNA Length = 2021 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1213 aagtatggtctcatttatcatgcttca 1239
>ref|XM_753615.1| Ustilago maydis 521 hypothetical protein (UM02561.1) partial mRNA Length = 1749 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 94 gacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcactttccc 153 ||||||||| | |||| |||||||||| | ||| ||||||||||| |||||||| ||| Sbjct: 550 gacaaggagatcaacatttatgctatgcgtgtcaaggaatggtacggctggcacttcccc 609 Query: 154 gag 156 ||| Sbjct: 610 gag 612
>gb|BC018805.1| Homo sapiens nucleolar protein NOP5/NOP58, mRNA (cDNA clone IMAGE:4905882) Length = 1745 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1188 aagtatggtctcatttatcatgcttca 1214
>gb|BC009306.2| Homo sapiens nucleolar protein NOP5/NOP58, mRNA (cDNA clone IMAGE:4301008), partial cds Length = 1722 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1165 aagtatggtctcatttatcatgcttca 1191
>emb|AL117554.1|HSM801080 Homo sapiens mRNA; cDNA DKFZp564H2171 (from clone DKFZp564H2171) Length = 1550 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1218 aagtatggtctcatttatcatgcttca 1244
>emb|CR859793.1| Pongo pygmaeus mRNA; cDNA DKFZp468L199 (from clone DKFZp468L199) Length = 1625 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1204 aagtatggtctcatttatcatgcttca 1230
>emb|CR618609.1| full-length cDNA clone CS0DI067YI02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1990 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1217 aagtatggtctcatttatcatgcttca 1243
>emb|CR591676.1| full-length cDNA clone CS0DC017YH12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1692 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1172 aagtatggtctcatttatcatgcttca 1198
>dbj|AK023975.1| Homo sapiens cDNA FLJ13913 fis, clone Y79AA1000231, highly similar to Homo sapiens nucleolar protein NOP5/NOP58 mRNA Length = 1737 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 934 aagtatggtctcatttatcatgcttca 960
>gb|AF123534.1|AF123534 Homo sapiens nucleolar protein NOP5/NOP58 mRNA, complete cds Length = 1590 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1009 aagtatggtctcatttatcatgcttca 1035
>gb|BC001707.1|BC001707 Homo sapiens, Similar to nucleolar protein NOP5/NOP58, clone IMAGE:3542130, mRNA Length = 1451 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1201 aagtatggtctcatttatcatgcttca 1227
>ref|NM_058733.3| Caenorhabditis elegans W01B11.3 (W01B11.3) mRNA, complete cds Length = 1788 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||||||| | |||| |||| |||| | ||| | ||||||||||| ||| Sbjct: 510 gatgatcttgacaaggagttgaacaactatgttatgcgtgtcagagaatggtacggatgg 569 Query: 145 cactttcccgagctc 159 || || || |||||| Sbjct: 570 catttcccagagctc 584
>gb|AF161469.1|AF161469 Homo sapiens HSPC120 mRNA, complete cds Length = 1696 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 888 aagtatggtctcatttatcatgcttca 914
>gb|AC064836.7| Homo sapiens BAC clone RP11-686O6 from 2, complete sequence Length = 154754 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 34509 aagtatggtctcatttatcatgcttca 34535
>gb|AF043704.1| Caenorhabditis elegans cosmid W01B11, complete sequence Length = 36999 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Plus Query: 85 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 144 |||||||||||||||||| | |||| |||| |||| | ||| | ||||||||||| ||| Sbjct: 1904 gatgatcttgacaaggagttgaacaactatgttatgcgtgtcagagaatggtacggatgg 1963 Query: 145 cactttcccgagctc 159 || || || |||||| Sbjct: 1964 catttcccagagctc 1978
>gb|AF263608.1|AF263608 Homo sapiens nucleolar protein 5 (NOP5) mRNA, complete cds Length = 1590 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1009 aagtatggtctcatttatcatgcttca 1035
>gb|BC032592.2| Homo sapiens nucleolar protein NOP5/NOP58, mRNA (cDNA clone MGC:45092 IMAGE:5527148), complete cds Length = 1979 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1159 aagtatggtctcatttatcatgcttca 1185
>gb|AY610028.1| Sus scrofa clone Clu_5700.scr.msk.p1.Contig1, mRNA sequence Length = 2251 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 aagtatggtctcatctatcatgcttca 612 |||||||||||||| |||||||||||| Sbjct: 1197 aagtatggtctcatttatcatgcttca 1223
>gb|AY423035.1| Danio rerio nucleolar protein 5A (NOL5A) mRNA, complete cds Length = 1610 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 127 cgtgaatggtacggttggcactttcccgagctca 160 |||||||||||||||| |||||||| ||||||| Sbjct: 638 cgtgaatggtacggttaccactttccagagctca 671 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 526 cagattctgggggcagagaaggcgttgttcagagctctgaagac 569 ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 1049 cagatcctgggtgcagagaaggccctgttcagagcattgaagac 1092
>gb|AY648814.1| Danio rerio NOP56 mRNA, complete cds Length = 2018 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 127 cgtgaatggtacggttggcactttcccgagctca 160 |||||||||||||||| |||||||| ||||||| Sbjct: 617 cgtgaatggtacggttaccactttccagagctca 650 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 526 cagattctgggggcagagaaggcgttgttcagagctctgaagac 569 ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 1028 cagatcctgggtgcagagaaggccctgttcagagcattgaagac 1071
>gb|BC075769.1| Danio rerio nucleolar protein 5A, mRNA (cDNA clone IMAGE:6900431), partial cds Length = 1388 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 127 cgtgaatggtacggttggcactttcccgagctca 160 |||||||||||||||| |||||||| ||||||| Sbjct: 609 cgtgaatggtacggttaccactttccagagctca 642 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 526 cagattctgggggcagagaaggcgttgttcagagctctgaagac 569 ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 1020 cagatcctgggtgcagagaaggccctgttcagagcgttgaagac 1063
>ref|XM_322653.1| Neurospora crassa OR74A hypothetical protein (NCU03396.1) partial mRNA Length = 1794 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Plus Query: 91 cttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcacttt 150 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 523 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 582 Query: 151 cccgag 156 |||||| Sbjct: 583 cccgag 588
>ref|XM_951750.1| Neurospora crassa OR74A hypothetical protein (NCU03396.1) partial mRNA Length = 1794 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Plus Query: 91 cttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcacttt 150 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 523 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 582 Query: 151 cccgag 156 |||||| Sbjct: 583 cccgag 588
>ref|XM_707223.1| Candida albicans SC5314 hypothetical protein (CaO19.1199), mRNA Length = 1551 Score = 44.1 bits (22), Expect = 0.53 Identities = 58/70 (82%) Strand = Plus / Plus Query: 544 aaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctcatctat 603 ||||| |||||||||||| |||| || || |||| ||||| || |||||| | ||||| Sbjct: 970 aaggctttgttcagagctttgaaaaccaaacatgacacaccaaaatatggtataatctac 1029 Query: 604 catgcttcat 613 |||||||||| Sbjct: 1030 catgcttcat 1039
>gb|BC059982.1| Xenopus laevis hypothetical protein MGC68668, mRNA (cDNA clone MGC:68668 IMAGE:4032881), complete cds Length = 3359 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 255 accagaagaagtggaagcagag 276 |||||||||||||||||||||| Sbjct: 808 accagaagaagtggaagcagag 829
>gb|BC056732.1| Danio rerio nucleolar protein 5A, mRNA (cDNA clone IMAGE:6795155), partial cds Length = 1478 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 127 cgtgaatggtacggttggcactttcccgagctca 160 |||||||||||||||| |||||||| ||||||| Sbjct: 604 cgtgaatggtacggttaccactttccagagctca 637 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 526 cagattctgggggcagagaaggcgttgttcagagctctgaagac 569 ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 1015 cagatcctgggtgcagagaaggccctgttcagagcattgaagac 1058
>ref|XM_947073.1| Theileria annulata strain Ankara nucleolar protein Nop5 (TA13805) partial mRNA Length = 1491 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 133 tggtacggttggcactttcccgagct 158 |||||||||||||||||||| ||||| Sbjct: 565 tggtacggttggcactttccagagct 590
>emb|AL669992.1|NCB19C19 Neurospora crassa DNA linkage group II BAC clone B19C19 Length = 61082 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Plus Query: 91 cttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcacttt 150 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 13989 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 14048 Query: 151 cccgag 156 |||||| Sbjct: 14049 cccgag 14054
>ref|NM_201217.1| Danio rerio nucleolar protein 5A (nol5a), mRNA Length = 1610 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 127 cgtgaatggtacggttggcactttcccgagctca 160 |||||||||||||||| |||||||| ||||||| Sbjct: 638 cgtgaatggtacggttaccactttccagagctca 671 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 526 cagattctgggggcagagaaggcgttgttcagagctctgaagac 569 ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 1049 cagatcctgggtgcagagaaggccctgttcagagcattgaagac 1092
>gb|AC023051.21|AC023051 Homo sapiens 12 BAC RP11-666F17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185930 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 actgcacttgttggtgaacttg 457 |||||||||||||||||||||| Sbjct: 147850 actgcacttgttggtgaacttg 147829
>gb|U36470.1|NCU36470 Neurospora crassa vacuolar ATPase 41 kDa subunit (vma6) gene, ribosome-associated protein (rap-1) gene, complete cds Length = 6119 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Minus Query: 91 cttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcacttt 150 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 78 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 19 Query: 151 cccgag 156 |||||| Sbjct: 18 cccgag 13
>emb|AL163192.6|HS298E2 Homo sapiens chromosome 9 BAC RP11-298E2, complete sequence Length = 140741 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 aggaggcagctgtaatttccatggga 306 ||||||||||||||||||||| |||| Sbjct: 79352 aggaggcagctgtaatttccagggga 79327
>gb|DQ271447.1| Mustela vison clone IX1F7 microsatellite sequence Length = 380 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 tctgagtacagagcccagctc 390 ||||||||||||||||||||| Sbjct: 155 tctgagtacagagcccagctc 135
>gb|AE009919.1|AE009919 Pyrobaculum aerophilum strain IM2 section 174 of 201 of the complete genome Length = 10746 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 532 ctgggggcagagaaggcgttgttcagagc 560 |||||||| || ||||||||||||||||| Sbjct: 3350 ctgggggcggaaaaggcgttgttcagagc 3322
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 541 gagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctc 597 |||||||| ||||||||||| || ||||| ||||| | |||||| || || |||||| Sbjct: 1032606 gagaaggcattgttcagagcgctaaagacgaagcacgatacaccaaaatacggtctc 1032550
>ref|NM_211230.1| Eremothecium gossypii AFR328Cp (AFR328C), mRNA Length = 1542 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 541 gagaaggcgttgttcagagctctgaagacaaagcatgctacaccgaagtatggtctc 597 |||||||| ||||||||||| || ||||| ||||| | |||||| || || |||||| Sbjct: 967 gagaaggcattgttcagagcgctaaagacgaagcacgatacaccaaaatacggtctc 1023
>emb|AL844900.3| Mouse DNA sequence from clone RP23-301L16 on chromosome X, complete sequence Length = 183256 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 ctgcacttgttggtgaacttg 457 ||||||||||||||||||||| Sbjct: 31012 ctgcacttgttggtgaacttg 31032
>ref|NM_001031125.1| Gallus gallus septin 6 (SEPT6), mRNA Length = 2443 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gaagcagagctgaaggaggc 287 |||||||||||||||||||| Sbjct: 1096 gaagcagagctgaaggaggc 1115
>ref|XM_991232.1| PREDICTED: Mus musculus Max protein (Max), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 actgtgtgatcaagtcctggctct 368 ||||||||||| |||||||||||| Sbjct: 1628 actgtgtgatccagtcctggctct 1651
>ref|XM_001002021.1| PREDICTED: Mus musculus Max protein (Max), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 actgtgtgatcaagtcctggctct 368 ||||||||||| |||||||||||| Sbjct: 1628 actgtgtgatccagtcctggctct 1651
>ref|XM_749566.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g09600) partial mRNA Length = 1569 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 526 cagattctgggggcagagaaggcgttgttcagagctctgaagac 569 |||||||| || || |||||||| | ||||||||||||||||| Sbjct: 1000 cagattctcggcgcggagaaggctcttttcagagctctgaagac 1043
>ref|XM_444941.1| Candida glabrata CBS138 hypothetical protein (CAGL0A04015g) partial mRNA Length = 1527 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gaatggtacggttggcactt 149 |||||||||||||||||||| Sbjct: 583 gaatggtacggttggcactt 602
>gb|AC124556.4| Mus musculus BAC clone RP23-246K11 from chromosome 12, complete sequence Length = 202214 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 actgtgtgatcaagtcctggctct 368 ||||||||||| |||||||||||| Sbjct: 76752 actgtgtgatccagtcctggctct 76775
>gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gcagtgaaccttgacttctc 245 |||||||||||||||||||| Sbjct: 78934 gcagtgaaccttgacttctc 78953
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gaatggtacggttggcactt 149 |||||||||||||||||||| Sbjct: 398322 gaatggtacggttggcactt 398303
>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08, complete sequence Length = 145670 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 taacttgactgcacttgttg 448 |||||||||||||||||||| Sbjct: 87282 taacttgactgcacttgttg 87301
>emb|CR387927.9| Zebrafish DNA sequence from clone CH211-260P11 in linkage group 14, complete sequence Length = 149672 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 aaggaggcagctgtaatttc 299 |||||||||||||||||||| Sbjct: 31014 aaggaggcagctgtaatttc 30995
>emb|AJ719542.1| Gallus gallus mRNA for hypothetical protein, clone 3d14 Length = 2443 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gaagcagagctgaaggaggc 287 |||||||||||||||||||| Sbjct: 1096 gaagcagagctgaaggaggc 1115
>dbj|AB220397.1| Macaca fascicularis mRNA, clone QccE-11793: similar to Homo sapiens MAP/microtubule affinity-regulating kinase 4 (MARK4), mRNA, NM_002375.3 Length = 2318 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ggaagcagagctgaaggagg 286 |||||||||||||||||||| Sbjct: 330 ggaagcagagctgaaggagg 349
>gb|AC153141.7| Mus musculus BAC clone RP23-268A17 from chromosome 10, complete sequence Length = 221824 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 tgatgaatctggccaagcaa 510 |||||||||||||||||||| Sbjct: 128965 tgatgaatctggccaagcaa 128984
>dbj|AK080431.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730011M08 product:Max protein, full insert sequence Length = 1928 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 actgtgtgatcaagtcctggctct 368 ||||||||||| |||||||||||| Sbjct: 1668 actgtgtgatccagtcctggctct 1691
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 taacttgactgcacttgttg 448 |||||||||||||||||||| Sbjct: 19305450 taacttgactgcacttgttg 19305469
>gb|AF549772.1| Leucania inermis cytochrome c oxidase I subunit (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 617 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tattgcacatggtggtagtt 490 |||||||||||||||||||| Sbjct: 317 tattgcacatggtggtagtt 336
>gb|DQ124215.2| Dunaliella salina MAR-binding protein mRNA, complete cds Length = 2232 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 94 gacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcactt 149 ||||||||||| ||||| ||||| ||| | || ||||| ||||| || |||||||| Sbjct: 619 gacaaggagctgaacacgtatgccatgcgtgtgcgtgagtggtatggctggcactt 674
>gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, complete sequence Length = 164500 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 taaagctgtgaagatgatgg 211 |||||||||||||||||||| Sbjct: 143756 taaagctgtgaagatgatgg 143775
>gb|AF203894.1| Laurencia filiformis small subunit ribosomal RNA gene, complete sequence Length = 1766 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tggtacggttggcactttcc 152 |||||||||||||||||||| Sbjct: 1031 tggtacggttggcactttcc 1050
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gaggcagctgtaatttccat 302 |||||||||||||||||||| Sbjct: 1331804 gaggcagctgtaatttccat 1331785
>gb|BC090915.1| Danio rerio nucleolar protein 5A, mRNA (cDNA clone IMAGE:5916428), partial cds Length = 1153 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 526 cagattctgggggcagagaaggcgttgttcagagctctgaagac 569 ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 684 cagatcctgggtgcagagaaggccctgttcagagcattgaagac 727
>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence Length = 236246 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gcagtgaaccttgacttctc 245 |||||||||||||||||||| Sbjct: 221436 gcagtgaaccttgacttctc 221455 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,976,861 Number of Sequences: 3902068 Number of extensions: 4976861 Number of successful extensions: 92690 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 92317 Number of HSP's gapped (non-prelim): 347 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)