| Clone Name | bags8j17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF542967.1| Triticum aestivum annexin P35-like mRNA, partial sequence Length = 766 Score = 581 bits (293), Expect = e-163 Identities = 391/421 (92%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 1 gccgcgcacgtcaccggcgacttccgcaagcttttggtgcctcttgtaagcgcgtaccgc 60 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 178 gccgcgcacgtcaccggcgaattccgcaagcttttggtgcctcttgtaagcgcataccgc 237 Query: 61 tacgatggcccggtaggtgaatacgtcgttggcgcactctgaagccaagatactccatgc 120 ||||||||||||| ||||||| || |||||||| |||||||||||||| |||||| ||| Sbjct: 238 tacgatggcccgg-aggtgaacacatcgttggcacactctgaagccaaaatactcaatgg 296 Query: 121 gaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggag 180 ||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 297 aaagatcaacgagaaggcctacagtgatgatgagatcatcaggattctcactacaaggag 356 Query: 181 caaagctcagctacttgcaacattcaacagctacaatgatcagtttagtcaccctatcac 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 357 caaagctcagctacttgcaacattcaacagctacaatgatcagttcagtcaccccatcac 416 Query: 241 caaggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataag 300 ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 417 taaggacctcaaggaagaccccaagaacgagttcctctcaaccctgagggcgatcataag 476 Query: 301 gtgtttcacttgccccgacagatactttgagaaggtcatccggttggctcttggtggtgt 360 ||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| || || Sbjct: 477 gtgtttcacttgccctgacagatactttgagaagatcatccggttggcccttggaggcgt 536 Query: 361 cggtacagacgagcacaccc-ttactagggtgataaccactcgtgccgaggtggacctga 419 ||| ||||||||| |||||| |||| ||||| ||||||||||| |||||||||||||||| Sbjct: 537 cggcacagacgagaacaccctttacgagggtcataaccactcgcgccgaggtggacctga 596 Query: 420 a 420 | Sbjct: 597 a 597
>ref|XM_467846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1223 Score = 240 bits (121), Expect = 3e-60 Identities = 344/417 (82%), Gaps = 1/417 (0%) Strand = Plus / Plus Query: 4 gcgcacgtcaccggcgacttccgcaagcttttggtgcctcttgtaagcgcgtaccgctac 63 |||||| |||||||||||| ||| |||||||||||||| ||||| | | || ||||| Sbjct: 530 gcgcacatcaccggcgactaccgtaagcttttggtgccacttgtgactgtatatcgctat 589 Query: 64 gatggcccggtaggtgaatacgtcgttggcgcactctgaagccaagatactccatgcgaa 123 ||||| || | ||||||| || |||||||| || ||||||||||| |||||||||| ||| Sbjct: 590 gatgggccag-aggtgaacacatcgttggcacattctgaagccaaaatactccatgagaa 648 Query: 124 gatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggagcaa 183 |||| || ||||| |||||||| ||||| || ||||||||||||| ||||||||||| Sbjct: 649 gatccatgacaaggcttacagtgacgatgaaatcatcaggattctcaccacaaggagcaa 708 Query: 184 agctcagctacttgcaacattcaacagctacaatgatcagtttagtcaccctatcaccaa 243 ||| ||| |||| ||||||||||| || |||||||||||||| | || || ||||| || Sbjct: 709 agcacagttactagcaacattcaatagttacaatgatcagttcggccatccaatcactaa 768 Query: 244 ggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataaggtg 303 ||| || || | ||||| |||||||||||||| || || |||||||||||||| || Sbjct: 769 ggatcttaaagctgatcctaaggacgagttccttggtacactaagggcgatcataagatg 828 Query: 304 tttcacttgccccgacagatactttgagaaggtcatccggttggctcttggtggtgtcgg 363 ||||||||||| ||||||||||||||||| ||||| || |||||||| || || | || Sbjct: 829 cttcacttgccctgacagatactttgagaaagtcattcgattggctctaggaggaatggg 888 Query: 364 tacagacgagcacacccttactagggtgataaccactcgtgccgaggtggacctgaa 420 ||||||||| || | ||||| ||| | ||||| |||||||||||||| |||||||| Sbjct: 889 cacagacgagaactctcttacaaggatcataacaactcgtgccgaggtagacctgaa 945
>dbj|AK101787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065F07, full insert sequence Length = 1223 Score = 240 bits (121), Expect = 3e-60 Identities = 344/417 (82%), Gaps = 1/417 (0%) Strand = Plus / Plus Query: 4 gcgcacgtcaccggcgacttccgcaagcttttggtgcctcttgtaagcgcgtaccgctac 63 |||||| |||||||||||| ||| |||||||||||||| ||||| | | || ||||| Sbjct: 530 gcgcacatcaccggcgactaccgtaagcttttggtgccacttgtgactgtatatcgctat 589 Query: 64 gatggcccggtaggtgaatacgtcgttggcgcactctgaagccaagatactccatgcgaa 123 ||||| || | ||||||| || |||||||| || ||||||||||| |||||||||| ||| Sbjct: 590 gatgggccag-aggtgaacacatcgttggcacattctgaagccaaaatactccatgagaa 648 Query: 124 gatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggagcaa 183 |||| || ||||| |||||||| ||||| || ||||||||||||| ||||||||||| Sbjct: 649 gatccatgacaaggcttacagtgacgatgaaatcatcaggattctcaccacaaggagcaa 708 Query: 184 agctcagctacttgcaacattcaacagctacaatgatcagtttagtcaccctatcaccaa 243 ||| ||| |||| ||||||||||| || |||||||||||||| | || || ||||| || Sbjct: 709 agcacagttactagcaacattcaatagttacaatgatcagttcggccatccaatcactaa 768 Query: 244 ggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataaggtg 303 ||| || || | ||||| |||||||||||||| || || |||||||||||||| || Sbjct: 769 ggatcttaaagctgatcctaaggacgagttccttggtacactaagggcgatcataagatg 828 Query: 304 tttcacttgccccgacagatactttgagaaggtcatccggttggctcttggtggtgtcgg 363 ||||||||||| ||||||||||||||||| ||||| || |||||||| || || | || Sbjct: 829 cttcacttgccctgacagatactttgagaaagtcattcgattggctctaggaggaatggg 888 Query: 364 tacagacgagcacacccttactagggtgataaccactcgtgccgaggtggacctgaa 420 ||||||||| || | ||||| ||| | ||||| |||||||||||||| |||||||| Sbjct: 889 cacagacgagaactctcttacaaggatcataacaactcgtgccgaggtagacctgaa 945
>emb|X98245.1|ZMANNP35 Z.mays mRNA for annexin p35 Length = 1257 Score = 234 bits (118), Expect = 2e-58 Identities = 296/354 (83%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 1 gccgcgcacgtcaccggcgacttccgcaagcttttggtgcctcttgtaagcgcgtaccgc 60 |||||||| ||||||||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 543 gccgcgcatgtcaccggcgacttccgaaagcttttagtgcctcttgttagtgcgtaccgc 602 Query: 61 tacgatggcccggtaggtgaatacgtcgttggcgcactctgaagccaagatactccatgc 120 || |||||||| | ||||||| || || ||||| || ||||||||||| ||||| |||| Sbjct: 603 tatgatggcccag-aggtgaacacatctttggctcattctgaagccaaaatacttcatga 661 Query: 121 gaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggag 180 ||||||| ||||||| ||||||||||| ||| || | || |||||||| ||| |||| Sbjct: 662 gaagatccataagaaggcttacagtgatgaggagatcattagaattctcaccacacggag 721 Query: 181 caaagctcagctacttgcaacattcaacagctacaatgatcagtttagtcaccctatcac 240 ||||||||||||||||||||||||||| |||||||| |||||||| | ||| | |||| Sbjct: 722 caaagctcagctacttgcaacattcaatagctacaaggatcagttcactcatgcaatcaa 781 Query: 241 caaggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataag 300 |||||| || || | || |||||||| ||||| || || || ||| |||||||||| | Sbjct: 782 caaggatctgaaagctgaccccaaggatgagtttctttcaacactgcgggcgatcatccg 841 Query: 301 gtgtttcacttgccccgacagatactttgagaaggtcatccggttggctcttgg 354 ||| ||||| ||||| ||||||||||| ||||| ||||| || |||||||||| Sbjct: 842 gtgcttcacctgccctgacagatacttcgagaaagtcattcgactggctcttgg 895
>gb|AY105105.1| Zea mays PCO122403 mRNA sequence Length = 1401 Score = 234 bits (118), Expect = 2e-58 Identities = 296/354 (83%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 1 gccgcgcacgtcaccggcgacttccgcaagcttttggtgcctcttgtaagcgcgtaccgc 60 |||||||| ||||||||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 637 gccgcgcatgtcaccggcgacttccgaaagcttttagtgcctcttgttagtgcgtaccgc 696 Query: 61 tacgatggcccggtaggtgaatacgtcgttggcgcactctgaagccaagatactccatgc 120 || |||||||| | ||||||| || || ||||| || ||||||||||| ||||| |||| Sbjct: 697 tatgatggcccag-aggtgaacacatctttggctcattctgaagccaaaatacttcatga 755 Query: 121 gaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggag 180 ||||||| ||||||| ||||||||||| ||| || | || |||||||| ||| |||| Sbjct: 756 gaagatccataagaaggcttacagtgatgaggagatcattagaattctcaccacacggag 815 Query: 181 caaagctcagctacttgcaacattcaacagctacaatgatcagtttagtcaccctatcac 240 ||||||||||||||||||||||||||| |||||||| |||||||| | ||| | |||| Sbjct: 816 caaagctcagctacttgcaacattcaatagctacaaggatcagttcactcatgcaatcaa 875 Query: 241 caaggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataag 300 |||||| || || | || |||||||| ||||| || || || ||| |||||||||| | Sbjct: 876 caaggatctgaaagctgaccccaaggatgagtttctttcaacactgcgggcgatcatccg 935 Query: 301 gtgtttcacttgccccgacagatactttgagaaggtcatccggttggctcttgg 354 ||| ||||| ||||| ||||||||||| ||||| ||||| || |||||||||| Sbjct: 936 gtgcttcacctgccctgacagatacttcgagaaagtcattcgactggctcttgg 989
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 133 bits (67), Expect = 5e-28 Identities = 130/151 (86%) Strand = Plus / Minus Query: 75 aggtgaatacgtcgttggcgcactctgaagccaagatactccatgcgaagatcagcgaga 134 ||||||| || |||||||| || ||||||||||| |||||||||| ||||||| || | Sbjct: 31717569 aggtgaacacatcgttggcacattctgaagccaaaatactccatgagaagatccatgaca 31717510 Query: 135 aggcctacagtgatgatgaggtcgtcaggattctcactacaaggagcaaagctcagctac 194 |||| |||||||| ||||| || ||||||||||||| |||||||||||||| ||| ||| Sbjct: 31717509 aggcttacagtgacgatgaaatcatcaggattctcaccacaaggagcaaagcacagttac 31717450 Query: 195 ttgcaacattcaacagctacaatgatcagtt 225 | ||||||||||| || |||||||||||||| Sbjct: 31717449 tagcaacattcaatagttacaatgatcagtt 31717419 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 257 gatcccaaggacgagttcctctcgaccctgagggcgatcataaggtgtttcacttgcccc 316 ||||| |||||||||||||| || || |||||||||||||| || ||||||||||| Sbjct: 31717138 gatcctaaggacgagttccttggtacactaagggcgatcataagatgcttcacttgccct 31717079 Query: 317 gacagatactttgagaaggtcatccggttggctcttggtggtgtcggtacagacgagcac 376 ||||||||||||||||| ||||| || |||||||| || || | || ||||||||| || Sbjct: 31717078 gacagatactttgagaaagtcattcgattggctctaggaggaatgggcacagacgagaac 31717019 Query: 377 acccttactagggtgataaccactcgtgccgaggtggacctgaa 420 | ||||| ||| | ||||| |||||||||||||| |||||||| Sbjct: 31717018 tctcttacaaggatcataacaactcgtgccgaggtagacctgaa 31716975
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 133 bits (67), Expect = 5e-28 Identities = 130/151 (86%) Strand = Plus / Minus Query: 75 aggtgaatacgtcgttggcgcactctgaagccaagatactccatgcgaagatcagcgaga 134 ||||||| || |||||||| || ||||||||||| |||||||||| ||||||| || | Sbjct: 13367 aggtgaacacatcgttggcacattctgaagccaaaatactccatgagaagatccatgaca 13308 Query: 135 aggcctacagtgatgatgaggtcgtcaggattctcactacaaggagcaaagctcagctac 194 |||| |||||||| ||||| || ||||||||||||| |||||||||||||| ||| ||| Sbjct: 13307 aggcttacagtgacgatgaaatcatcaggattctcaccacaaggagcaaagcacagttac 13248 Query: 195 ttgcaacattcaacagctacaatgatcagtt 225 | ||||||||||| || |||||||||||||| Sbjct: 13247 tagcaacattcaatagttacaatgatcagtt 13217 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 257 gatcccaaggacgagttcctctcgaccctgagggcgatcataaggtgtttcacttgcccc 316 ||||| |||||||||||||| || || |||||||||||||| || ||||||||||| Sbjct: 12936 gatcctaaggacgagttccttggtacactaagggcgatcataagatgcttcacttgccct 12877 Query: 317 gacagatactttgagaaggtcatccggttggctcttggtggtgtcggtacagacgagcac 376 ||||||||||||||||| ||||| || |||||||| || || | || ||||||||| || Sbjct: 12876 gacagatactttgagaaagtcattcgattggctctaggaggaatgggcacagacgagaac 12817 Query: 377 acccttactagggtgataaccactcgtgccgaggtggacctgaa 420 | ||||| ||| | ||||| |||||||||||||| |||||||| Sbjct: 12816 tctcttacaaggatcataacaactcgtgccgaggtagacctgaa 12773
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 133 bits (67), Expect = 5e-28 Identities = 130/151 (86%) Strand = Plus / Minus Query: 75 aggtgaatacgtcgttggcgcactctgaagccaagatactccatgcgaagatcagcgaga 134 ||||||| || |||||||| || ||||||||||| |||||||||| ||||||| || | Sbjct: 97356 aggtgaacacatcgttggcacattctgaagccaaaatactccatgagaagatccatgaca 97297 Query: 135 aggcctacagtgatgatgaggtcgtcaggattctcactacaaggagcaaagctcagctac 194 |||| |||||||| ||||| || ||||||||||||| |||||||||||||| ||| ||| Sbjct: 97296 aggcttacagtgacgatgaaatcatcaggattctcaccacaaggagcaaagcacagttac 97237 Query: 195 ttgcaacattcaacagctacaatgatcagtt 225 | ||||||||||| || |||||||||||||| Sbjct: 97236 tagcaacattcaatagttacaatgatcagtt 97206 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 257 gatcccaaggacgagttcctctcgaccctgagggcgatcataaggtgtttcacttgcccc 316 ||||| |||||||||||||| || || |||||||||||||| || ||||||||||| Sbjct: 96925 gatcctaaggacgagttccttggtacactaagggcgatcataagatgcttcacttgccct 96866 Query: 317 gacagatactttgagaaggtcatccggttggctcttggtggtgtcggtacagacgagcac 376 ||||||||||||||||| ||||| || |||||||| || || | || ||||||||| || Sbjct: 96865 gacagatactttgagaaagtcattcgattggctctaggaggaatgggcacagacgagaac 96806 Query: 377 acccttactagggtgataaccactcgtgccgaggtggacctgaa 420 | ||||| ||| | ||||| |||||||||||||| |||||||| Sbjct: 96805 tctcttacaaggatcataacaactcgtgccgaggtagacctgaa 96762
>dbj|AK072559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A10, full insert sequence Length = 1274 Score = 131 bits (66), Expect = 2e-27 Identities = 333/418 (79%), Gaps = 3/418 (0%) Strand = Plus / Plus Query: 4 gcgcacgtcaccggcgacttccgcaagcttttggtgcctcttgtaagcgcgtaccgctac 63 ||||||| ||| || |||||||||||||| |||||||| ||| |||| || |||||||| Sbjct: 516 gcgcacgccactggtgacttccgcaagctcttggtgccacttataagtgcttaccgctat 575 Query: 64 gatggcccggtaggtgaatacgtcgttggcgcactctgaagccaagatactccatgcgaa 123 || || |||| || | || || |||||| || || |||||||| || || |||| ||| Sbjct: 576 gaggggccggaag-tcaacacaaagttggcacattcagaagccaaaattctgcatgagaa 634 Query: 124 gatc-agcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggagca 182 |||| ||| | ||||| || ||||||||||| || |||| ||||||||||| ||||||| Sbjct: 635 gatccagc-ataaggcatatggtgatgatgagatcatcagaattctcactactaggagca 693 Query: 183 aagctcagctacttgcaacattcaacagctacaatgatcagtttagtcaccctatcacca 242 | |||||| | |||| |||||||| | ||||||||| | | | ||||||| |||| || Sbjct: 694 aggctcagttgattgcgacattcaatcgttacaatgatgaatatggtcacccaatcaaca 753 Query: 243 aggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataaggt 302 |||| ||||||| |||||||||||||||||||| || || ||| | || ||||| | | Sbjct: 754 aggatctcaaggctgatcccaaggacgagttcctttccacgctgcgtgcaatcatccgct 813 Query: 303 gtttcacttgccccgacagatactttgagaaggtcatccggttggctcttggtggtgtcg 362 | ||| |||||| ||||| ||||| ||||| |||||| ||||||| | | || | | Sbjct: 814 gcttctgttgccctgacaggtacttcgagaaagtcatcaggttggccatcgcaggcatgg 873 Query: 363 gtacagacgagcacacccttactagggtgataaccactcgtgccgaggtggacctgaa 420 | ||||||||| || |||| |||||| | || |||||||||||||||||||| ||||| Sbjct: 874 gaacagacgagaactccctcactaggatcattaccactcgtgccgaggtggatctgaa 931
>emb|X98244.2|ZMANNP33 Z.mays mRNA for annexin p33 Length = 1277 Score = 113 bits (57), Expect = 5e-22 Identities = 265/333 (79%), Gaps = 1/333 (0%) Strand = Plus / Plus Query: 4 gcgcacgtcaccggcgacttccgcaagcttttggtgcctcttgtaagcgcgtaccgctac 63 ||||||||||| || |||||||||||||| |||||||| |||||||| | |||||||| Sbjct: 499 gcgcacgtcactggggacttccgcaagctattggtgccacttgtaagtacttaccgctat 558 Query: 64 gatggcccggtaggtgaatacgtcgttggcgcactctgaagccaagatactccatgcgaa 123 ||||| || | |||| || || |||||| ||||| |||||||| |||| |||| ||| Sbjct: 559 gatggaccag-aggtcaacacaaggttggcacactcagaagccaaactacttcatgagaa 617 Query: 124 gatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggagcaa 183 |||| | ||||| ||||||||||||||| || |||| || ||||| || |||||||| Sbjct: 618 gatccatcacaaggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaa 677 Query: 184 agctcagctacttgcaacattcaacagctacaatgatcagtttagtcaccctatcaccaa 243 | ||||||| |||| |||||||| ||||||||| ||| | |||| |||| ||| Sbjct: 678 acctcagctgattgctacattcaatcattacaatgatgcatttggccaccgaatcaacaa 737 Query: 244 ggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataaggtg 303 ||| || |||| || ||| ||||||||| |||| || ||| |||||||||| |||| Sbjct: 738 ggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatccggtg 797 Query: 304 tttcacttgccccgacagatactttgagaaggt 336 |||| |||||| ||||| |||||||||||||| Sbjct: 798 cttcagttgccctgacaggtactttgagaaggt 830
>gb|AY105151.1| Zea mays PCO072293 mRNA sequence Length = 1369 Score = 113 bits (57), Expect = 5e-22 Identities = 265/333 (79%), Gaps = 1/333 (0%) Strand = Plus / Plus Query: 4 gcgcacgtcaccggcgacttccgcaagcttttggtgcctcttgtaagcgcgtaccgctac 63 ||||||||||| || |||||||||||||| |||||||| |||||||| | |||||||| Sbjct: 516 gcgcacgtcactggggacttccgcaagctattggtgccacttgtaagtacttaccgctat 575 Query: 64 gatggcccggtaggtgaatacgtcgttggcgcactctgaagccaagatactccatgcgaa 123 ||||| || | |||| || || |||||| ||||| |||||||| |||| |||| ||| Sbjct: 576 gatggaccag-aggtcaacacaaggttggcacactcagaagccaaactacttcatgagaa 634 Query: 124 gatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggagcaa 183 |||| | ||||| ||||||||||||||| || |||| || ||||| || |||||||| Sbjct: 635 gatccatcacaaggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaa 694 Query: 184 agctcagctacttgcaacattcaacagctacaatgatcagtttagtcaccctatcaccaa 243 | ||||||| |||| |||||||| ||||||||| ||| | |||| |||| ||| Sbjct: 695 acctcagctgattgctacattcaatcattacaatgatgcatttggccaccgaatcaacaa 754 Query: 244 ggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataaggtg 303 ||| || |||| || ||| ||||||||| |||| || ||| |||||||||| |||| Sbjct: 755 ggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatccggtg 814 Query: 304 tttcacttgccccgacagatactttgagaaggt 336 |||| |||||| ||||| |||||||||||||| Sbjct: 815 cttcagttgccctgacaggtactttgagaaggt 847
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 2e-08 Identities = 142/178 (79%) Strand = Plus / Plus Query: 243 aggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataaggt 302 |||| ||||||| |||||||||||||||||||| || || ||| | || ||||| | | Sbjct: 6264005 aggatctcaaggctgatcccaaggacgagttcctttccacgctgcgtgcaatcatccgct 6264064 Query: 303 gtttcacttgccccgacagatactttgagaaggtcatccggttggctcttggtggtgtcg 362 | ||| |||||| ||||| ||||| ||||| |||||| ||||||| | | || | | Sbjct: 6264065 gcttctgttgccctgacaggtacttcgagaaagtcatcaggttggccatcgcaggcatgg 6264124 Query: 363 gtacagacgagcacacccttactagggtgataaccactcgtgccgaggtggacctgaa 420 | ||||||||| || |||| |||||| | || |||||||||||||||||||| ||||| Sbjct: 6264125 gaacagacgagaactccctcactaggatcattaccactcgtgccgaggtggatctgaa 6264182 Score = 60.0 bits (30), Expect = 6e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 144 gtgatgatgaggtcgtcaggattctcactacaaggagcaaagctcagctacttgcaacat 203 ||||||||||| || |||| ||||||||||| |||||||| |||||| | |||| |||| Sbjct: 6263022 gtgatgatgagatcatcagaattctcactactaggagcaaggctcagttgattgcgacat 6263081 Query: 204 tcaacagctacaatgatcagtttagtcaccctatcaccaagg 245 |||| | ||||||||| | | | ||||||| |||| ||||| Sbjct: 6263082 tcaatcgttacaatgatgaatatggtcacccaatcaacaagg 6263123
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 67.9 bits (34), Expect = 2e-08 Identities = 142/178 (79%) Strand = Plus / Plus Query: 243 aggacctcaaggaagatcccaaggacgagttcctctcgaccctgagggcgatcataaggt 302 |||| ||||||| |||||||||||||||||||| || || ||| | || ||||| | | Sbjct: 58081 aggatctcaaggctgatcccaaggacgagttcctttccacgctgcgtgcaatcatccgct 58140 Query: 303 gtttcacttgccccgacagatactttgagaaggtcatccggttggctcttggtggtgtcg 362 | ||| |||||| ||||| ||||| ||||| |||||| ||||||| | | || | | Sbjct: 58141 gcttctgttgccctgacaggtacttcgagaaagtcatcaggttggccatcgcaggcatgg 58200 Query: 363 gtacagacgagcacacccttactagggtgataaccactcgtgccgaggtggacctgaa 420 | ||||||||| || |||| |||||| | || |||||||||||||||||||| ||||| Sbjct: 58201 gaacagacgagaactccctcactaggatcattaccactcgtgccgaggtggatctgaa 58258 Score = 60.0 bits (30), Expect = 6e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 144 gtgatgatgaggtcgtcaggattctcactacaaggagcaaagctcagctacttgcaacat 203 ||||||||||| || |||| ||||||||||| |||||||| |||||| | |||| |||| Sbjct: 57098 gtgatgatgagatcatcagaattctcactactaggagcaaggctcagttgattgcgacat 57157 Query: 204 tcaacagctacaatgatcagtttagtcaccctatcaccaagg 245 |||| | ||||||||| | | | ||||||| |||| ||||| Sbjct: 57158 tcaatcgttacaatgatgaatatggtcacccaatcaacaagg 57199
>emb|Y17502.1|NTA17502 Nicotiana tabacum an.1 gene Length = 2009 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 121 gaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggag 180 ||||||| ||| ||||| |||||||| ||||||||| |||| ||||| | |||||||| Sbjct: 1395 gaagatctccgataaggcttacagtgacgatgaggtcatcagaattctagccacaaggag 1454 Query: 181 caaagc 186 |||||| Sbjct: 1455 caaagc 1460
>emb|Y14972.1|NTANNE511 Nicotiana tabacum mRNA for annexin, clone X511 Length = 1196 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 121 gaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggag 180 ||||||| ||| ||||| |||||||| ||||||||| |||| ||||| | |||||||| Sbjct: 577 gaagatctccgataaggcttacagtgacgatgaggtcatcagaattctagccacaaggag 636 Query: 181 caaagc 186 |||||| Sbjct: 637 caaagc 642
>emb|X93308.1|CAANN C.annuum mRNA for annexin Length = 1180 Score = 46.1 bits (23), Expect = 0.091 Identities = 59/71 (83%) Strand = Plus / Plus Query: 116 catgcgaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactaca 175 |||| ||||||| ||| ||||| |||||||||||||||||| | || ||| | | ||| Sbjct: 530 catgagaagatctccgataaggcttacagtgatgatgaggtcattagaattttagccaca 589 Query: 176 aggagcaaagc 186 ||||||||||| Sbjct: 590 aggagcaaagc 600 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ccgcaagcttttggtgcctcttgt 47 ||||||||||||||| |||||||| Sbjct: 439 ccgcaagcttttggtacctcttgt 462
>emb|AJ130829.1|CAN130829 Capsicum annuum an.1 gene, exons 1-5 Length = 3733 Score = 46.1 bits (23), Expect = 0.091 Identities = 59/71 (83%) Strand = Plus / Plus Query: 116 catgcgaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctcactaca 175 |||| ||||||| ||| ||||| |||||||||||||||||| | || ||| | | ||| Sbjct: 2988 catgagaagatctccgataaggcttacagtgatgatgaggtcattagaattttagccaca 3047 Query: 176 aggagcaaagc 186 ||||||||||| Sbjct: 3048 aggagcaaagc 3058
>gb|AC147124.2| Mus musculus BAC clone RP24-163K4 from chromosome 7, complete sequence Length = 165569 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 actctgaagccaagatactcca 117 |||||||||||||||||||||| Sbjct: 37705 actctgaagccaagatactcca 37684
>gb|AC146590.25| Medicago truncatula clone mth2-145p10, complete sequence Length = 130834 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 170 actacaaggagcaaagctcagctacttgcaacattcaacagctaca 215 ||||||||||||||| | ||||| |||| ||||||||| |||||| Sbjct: 82440 actacaaggagcaaaacccagctgattgcgacattcaaccgctaca 82485
>emb|Y15036.1|MTANNEXIN Medicago truncatula mRNA for annexin Length = 1202 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 170 actacaaggagcaaagctcagctacttgcaacattcaacagctaca 215 ||||||||||||||| | ||||| |||| ||||||||| |||||| Sbjct: 605 actacaaggagcaaaacccagctgattgcgacattcaaccgctaca 650
>emb|AJ441322.1|MTR441322 Medicago truncatula ann1 gene for annexin, exons 1-6 Length = 2034 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 170 actacaaggagcaaagctcagctacttgcaacattcaacagctaca 215 ||||||||||||||| | ||||| |||| ||||||||| |||||| Sbjct: 1159 actacaaggagcaaaacccagctgattgcgacattcaaccgctaca 1204
>emb|X74947.1|MSANN M.sativa mRNA for annexin Length = 1182 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 tccgcaagcttttggtgcctcttgt 47 |||||||||||||||| |||||||| Sbjct: 414 tccgcaagcttttggttcctcttgt 438
>gb|DQ222520.1| Solanum tuberosum clone 121C09 annexin p34-like mRNA, complete cds Length = 1207 Score = 40.1 bits (20), Expect = 5.6 Identities = 62/76 (81%) Strand = Plus / Plus Query: 111 tactccatgcgaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctca 170 |||| |||| ||||||| ||| ||||| |||||||| ||||||||| | || ||| | Sbjct: 585 tactgcatgagaagatctccgataaggcttacagtgacgatgaggtcattagaattttag 644 Query: 171 ctacaaggagcaaagc 186 | |||||||||||||| Sbjct: 645 ccacaaggagcaaagc 660 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ccgcaagcttttggtgcctcttgt 47 ||||||||||||||| |||||||| Sbjct: 499 ccgcaagcttttggtacctcttgt 522
>gb|DQ191631.1| Solanum tuberosum annexin p34-like protein mRNA, complete cds Length = 1202 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ccgcaagcttttggtgcctcttgt 47 ||||||||||||||| |||||||| Sbjct: 498 ccgcaagcttttggtacctcttgt 521
>gb|AC004931.1| Homo sapiens PAC clone RP5-922I23 from 7, complete sequence Length = 145844 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccaagatactccatgcgaagatca 128 ||||||||||||||| |||||||| Sbjct: 114898 ccaagatactccatgagaagatca 114921
>gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, complete sequence Length = 234142 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccaagatactccatgcgaagatca 128 ||||||||||||||| |||||||| Sbjct: 170411 ccaagatactccatgagaagatca 170434
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 gcgcacgtcaccggcgacttccgc 27 |||||||||||||||||| ||||| Sbjct: 1009290 gcgcacgtcaccggcgacatccgc 1009313
>gb|AC145773.1| Pan troglodytes BAC clone RP43-32M11 from 7, complete sequence Length = 190630 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccaagatactccatgcgaagatca 128 ||||||||||||||| |||||||| Sbjct: 27662 ccaagatactccatgagaagatca 27685
>gb|AC155344.1| Brassica rapa subsp. pekinensis clone KBrH080A08, complete sequence Length = 110038 Score = 40.1 bits (20), Expect = 5.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 131 gagaaggcctacagtgatgatgaggtcgtcaggattctcactacaaggagcaaagctcag 190 |||||||| |||| |||||| || || |||| || || || |||||||||||||||||| Sbjct: 72668 gagaaggcttacactgatgaagatctcatcagaatcctgacaacaaggagcaaagctcag 72609
>emb|AL157834.12| Human DNA sequence from clone RP11-310E22 on chromosome 10 Contains two novel genes, a pseudogene similar to part of PRKC apoptosis WT1 regulator (PAWR), the gene for a novel AMP-binding enzyme, the 3' end of the PDLIM1 gene for PDZ and LIM domain 1 (elfin) and a CpG island, complete sequence Length = 190394 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 aagatactccatgcgaagatcagc 130 ||||||||||||| |||||||||| Sbjct: 50877 aagatactccatgagaagatcagc 50854
>emb|AJ401032.1|STU401032 Solanum tuberosum mRNA for annexin p34 (an34 gene) Length = 945 Score = 40.1 bits (20), Expect = 5.6 Identities = 62/76 (81%) Strand = Plus / Plus Query: 111 tactccatgcgaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctca 170 |||| |||| ||||||| ||| ||||| |||||||| ||||||||| | || ||| | Sbjct: 521 tactgcatgagaagatctccgataaggcttacagtgacgatgaggtcattagaattttag 580 Query: 171 ctacaaggagcaaagc 186 | |||||||||||||| Sbjct: 581 ccacaaggagcaaagc 596 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ccgcaagcttttggtgcctcttgt 47 ||||||||||||||| |||||||| Sbjct: 435 ccgcaagcttttggtacctcttgt 458
>dbj|BS000624.2| Pan troglodytes chromosome Y clone: PTB-002J03, complete sequence Length = 119627 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccaagatactccatgcgaagatca 128 ||||||||||||||| |||||||| Sbjct: 27810 ccaagatactccatgagaagatca 27833
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccaagatactccatgcgaagatca 128 ||||||||||||||| |||||||| Sbjct: 18624882 ccaagatactccatgagaagatca 18624859
>gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, complete sequence Length = 181245 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 aagatactccatgcgaagatcagc 130 ||||||||||||| |||||||||| Sbjct: 136936 aagatactccatgagaagatcagc 136913
>gb|AC022695.9| Homo sapiens chromosome 8, clone RP11-700E23, complete sequence Length = 184759 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 aagatactccatgcgaagatcagc 130 ||||||||||||| |||||||||| Sbjct: 179584 aagatactccatgagaagatcagc 179607
>gb|AC090811.5| Homo sapiens chromosome 8, clone RP11-55J5, complete sequence Length = 176418 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 aagatactccatgcgaagatcagc 130 ||||||||||||| |||||||||| Sbjct: 149000 aagatactccatgagaagatcagc 148977
>gb|AC007400.4| Homo sapiens BAC clone RP11-319A7 from 2, complete sequence Length = 147971 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 aagatactccatgcgaagatcagc 130 ||||||||||||| |||||||||| Sbjct: 2193 aagatactccatgagaagatcagc 2216
>gb|AC006376.2|AC006376 Homo sapiens BAC clone RP11-386L3 from Y, complete sequence Length = 172007 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccaagatactccatgcgaagatca 128 ||||||||||||||| |||||||| Sbjct: 157034 ccaagatactccatgagaagatca 157011
>gb|AC134620.4| Homo sapiens BAC clone RP11-1432C17 from 4, complete sequence Length = 80150 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gcttttggtgcctcttgtaa 49 |||||||||||||||||||| Sbjct: 38413 gcttttggtgcctcttgtaa 38432
>gb|AF079232.1|AF079232 Lycopersicon esculentum annexin p34 (AN34) mRNA, complete cds Length = 1160 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ccgcaagcttttggtgcctcttgt 47 ||||||||||||||| |||||||| Sbjct: 435 ccgcaagcttttggtacctcttgt 458
>gb|U73747.1|GHU73747 Gossypium hirsutum annexin (AnnGh2) mRNA, partial cds Length = 1146 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ccgcaagcttttggtgcctcttgt 47 ||||||||||||||| |||||||| Sbjct: 434 ccgcaagcttttggtccctcttgt 457
>emb|AL160233.3|CNS01RGX Human chromosome 14 DNA sequence BAC C-2373J19 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 139887 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 aagatactccatgcgaagatcagc 130 ||||||||||||| |||||||||| Sbjct: 43071 aagatactccatgagaagatcagc 43048
>gb|DQ252486.1| Solanum tuberosum clone 051E10 annexin p34-like protein-like mRNA, complete cds Length = 1215 Score = 40.1 bits (20), Expect = 5.6 Identities = 62/76 (81%) Strand = Plus / Plus Query: 111 tactccatgcgaagatcagcgagaaggcctacagtgatgatgaggtcgtcaggattctca 170 |||| |||| ||||||| ||| ||||| |||||||| ||||||||| | || ||| | Sbjct: 590 tactgcatgagaagatctccgataaggcttacagtgacgatgaggtcattagaattttag 649 Query: 171 ctacaaggagcaaagc 186 | |||||||||||||| Sbjct: 650 ccacaaggagcaaagc 665 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ccgcaagcttttggtgcctcttgt 47 ||||||||||||||| |||||||| Sbjct: 504 ccgcaagcttttggtacctcttgt 527 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,427,203 Number of Sequences: 3902068 Number of extensions: 2427203 Number of successful extensions: 41087 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40923 Number of HSP's gapped (non-prelim): 147 length of query: 420 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 398 effective length of database: 17,147,199,772 effective search space: 6824585509256 effective search space used: 6824585509256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)