| Clone Name | bags8j09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2291 Score = 617 bits (311), Expect = e-173 Identities = 507/570 (88%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 1 ggcaatcgggttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagc 60 |||||||||||||||||||| |||||||| ||||| |||||||| |||||| | | |||| Sbjct: 1374 ggcaatcgggttaatcaaggtctaactgtgtatggcaacaaagg-aagcaccg-atcagc 1431 Query: 61 atgcttacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagagg 120 |||| |||||||| ||||| |||||||| || ||||||||||| ||||||||||| |||| Sbjct: 1432 atgcctacattcagcagctgagagaaggtgtacacaacttcttcgttacttttattgagg 1491 Query: 121 ttttgcgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtg 180 |||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 1492 ttttgcgtgataggcctcctggtcatgattgggagcttgaacctggagttacatgtggtg 1551 Query: 181 actacttgtttgggatgttgcagggtacacgttctgctctttattctaatgaccgggagt 240 |||| ||||| |||||||||||||| || |||||||||||||||||||||||||| || | Sbjct: 1552 actatttgttcgggatgttgcagggaacccgttctgctctttattctaatgaccgagaat 1611 Query: 241 ccatctccgttaccgtgcaagaagtaactcccagagccgttggagcactggttgcactct 300 ||||||||||||| ||||||||||| ||||| || || |||||||| |||||||| || | Sbjct: 1612 ccatctccgttactgtgcaagaagttactcctagggctgttggagcgctggttgctctat 1671 Query: 301 atgaacgtgcagttggaatttatgcttctttagtaaacatcaatgcatatcatcagcctg 360 |||||||||| || || |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1672 atgaacgtgctgtggggatttatgcttctttagtaaatatcaatgcctatcatcagcctg 1731 Query: 361 gtgtcgaggcagggaaaaaagcagcaggagaggtattggcacttcagaaaagggtgctga 420 |||| ||||| |||||||| |||||||| || || |||||||||||||| |||||||||| Sbjct: 1732 gtgttgaggctgggaaaaaggcagcaggtgaagtgttggcacttcagaagagggtgctga 1791 Query: 421 ctgttctcaatgaagccagttgcaaagaccctgctgaaccattgaccctggagcaaatcg 480 ||||||| ||||| ||||| ||||| || ||||| || || ||||| ||||| ||||| | Sbjct: 1792 ctgttctgaatgaggccagctgcaaggatcctgccgagccgttgacgctggatcaaatag 1851 Query: 481 cagatcgttgccattgccccgaagatattgagatgatatacaaaataattcagcacatgg 540 |||| || || |||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 1852 cagagcgctgtcattgccctgaagatattgagatgatatacaaaataatccagcacatgg 1911 Query: 541 cagccaatgatagagcacttatagcagaag 570 |||| ||||||||||| || |||||||||| Sbjct: 1912 cagcaaatgatagagcgctcatagcagaag 1941
>dbj|AB107218.1| Oryza sativa (japonica cultivar-group) mRNA for glucose-6-phosphate isomerase, complete cds Length = 2154 Score = 617 bits (311), Expect = e-173 Identities = 507/570 (88%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 1 ggcaatcgggttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagc 60 |||||||||||||||||||| |||||||| ||||| |||||||| |||||| | | |||| Sbjct: 1298 ggcaatcgggttaatcaaggtctaactgtgtatggcaacaaagg-aagcaccg-atcagc 1355 Query: 61 atgcttacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagagg 120 |||| |||||||| ||||| |||||||| || ||||||||||| ||||||||||| |||| Sbjct: 1356 atgcctacattcagcagctgagagaaggtgtacacaacttcttcgttacttttattgagg 1415 Query: 121 ttttgcgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtg 180 |||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 1416 ttttgcgtgataggcctcctggtcatgattgggagcttgaacctggagttacatgtggtg 1475 Query: 181 actacttgtttgggatgttgcagggtacacgttctgctctttattctaatgaccgggagt 240 |||| ||||| |||||||||||||| || |||||||||||||||||||||||||| || | Sbjct: 1476 actatttgttcgggatgttgcagggaacccgttctgctctttattctaatgaccgagaat 1535 Query: 241 ccatctccgttaccgtgcaagaagtaactcccagagccgttggagcactggttgcactct 300 ||||||||||||| ||||||||||| ||||| || || |||||||| |||||||| || | Sbjct: 1536 ccatctccgttactgtgcaagaagttactcctagggctgttggagcgctggttgctctat 1595 Query: 301 atgaacgtgcagttggaatttatgcttctttagtaaacatcaatgcatatcatcagcctg 360 |||||||||| || || |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1596 atgaacgtgctgtggggatttatgcttctttagtaaatatcaatgcctatcatcagcctg 1655 Query: 361 gtgtcgaggcagggaaaaaagcagcaggagaggtattggcacttcagaaaagggtgctga 420 |||| ||||| |||||||| |||||||| || || |||||||||||||| |||||||||| Sbjct: 1656 gtgttgaggctgggaaaaaggcagcaggtgaagtgttggcacttcagaagagggtgctga 1715 Query: 421 ctgttctcaatgaagccagttgcaaagaccctgctgaaccattgaccctggagcaaatcg 480 ||||||| ||||| ||||| ||||| || ||||| || || ||||| ||||| ||||| | Sbjct: 1716 ctgttctgaatgaggccagctgcaaggatcctgccgagccgttgacgctggatcaaatag 1775 Query: 481 cagatcgttgccattgccccgaagatattgagatgatatacaaaataattcagcacatgg 540 |||| || || |||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 1776 cagagcgctgtcattgccctgaagatattgagatgatatacaaaataatccagcacatgg 1835 Query: 541 cagccaatgatagagcacttatagcagaag 570 |||| ||||||||||| || |||||||||| Sbjct: 1836 cagcaaatgatagagcgctcatagcagaag 1865
>dbj|AK068061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132I18, full insert sequence Length = 2292 Score = 609 bits (307), Expect = e-171 Identities = 506/570 (88%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 1 ggcaatcgggttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagc 60 |||||||||||||||||||| |||||||| ||||| |||||||| |||||| | | |||| Sbjct: 1374 ggcaatcgggttaatcaaggtctaactgtgtatggcaacaaagg-aagcaccg-atcagc 1431 Query: 61 atgcttacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagagg 120 |||| |||||||| ||||| |||||||| || ||||||||||| ||||||||||| |||| Sbjct: 1432 atgcctacattcagcagctgagagaaggtgtacacaacttcttcgttacttttattgagg 1491 Query: 121 ttttgcgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtg 180 |||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 1492 ttttgcgtgataggcctcctggtcatgattgggagcttgaacctggagttacatgtggtg 1551 Query: 181 actacttgtttgggatgttgcagggtacacgttctgctctttattctaatgaccgggagt 240 |||| ||||| |||||||||||||| || |||||||||||||||||||||||||| || | Sbjct: 1552 actatttgttcgggatgttgcagggaacccgttctgctctttattctaatgaccgagaat 1611 Query: 241 ccatctccgttaccgtgcaagaagtaactcccagagccgttggagcactggttgcactct 300 ||||||||||||| ||||||||||| ||||| || || |||||||| |||||||| || | Sbjct: 1612 ccatctccgttactgtgcaagaagttactcctagggctgttggagcgctggttgctctat 1671 Query: 301 atgaacgtgcagttggaatttatgcttctttagtaaacatcaatgcatatcatcagcctg 360 |||||||||| || || |||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 1672 atgaacgtgctgtggggatttatgcttctttagtaaatatcaatgcctatcaccagcctg 1731 Query: 361 gtgtcgaggcagggaaaaaagcagcaggagaggtattggcacttcagaaaagggtgctga 420 |||| ||||| |||||||| |||||||| || || |||||||||||||| |||||||||| Sbjct: 1732 gtgttgaggctgggaaaaaggcagcaggtgaagtgttggcacttcagaagagggtgctga 1791 Query: 421 ctgttctcaatgaagccagttgcaaagaccctgctgaaccattgaccctggagcaaatcg 480 ||||||| ||||| ||||| ||||| || ||||| || || ||||| ||||| ||||| | Sbjct: 1792 ctgttctgaatgaggccagctgcaaggatcctgccgagccgttgacgctggatcaaatag 1851 Query: 481 cagatcgttgccattgccccgaagatattgagatgatatacaaaataattcagcacatgg 540 |||| || || |||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 1852 cagagcgctgtcattgccctgaagatattgagatgatatacaaaataatccagcacatgg 1911 Query: 541 cagccaatgatagagcacttatagcagaag 570 |||| ||||||||||| || |||||||||| Sbjct: 1912 cagcaaatgatagagcgctcatagcagaag 1941
>ref|XM_482970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2068 Score = 428 bits (216), Expect = e-117 Identities = 481/567 (84%), Gaps = 2/567 (0%) Strand = Plus / Plus Query: 4 aatcgggttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagcatg 63 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 1236 aatcgggttaatcagggactaactgtttatggtaacaaagg-aagcacag-accagcatg 1293 Query: 64 cttacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttt 123 | |||||||| ||||| |||||||| |||||||||||||||||||||||||| || |||| Sbjct: 1294 cctacattcagcagctgagagaaggtgtgcacaacttctttgttacttttattgaagttt 1353 Query: 124 tgcgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgact 183 |||| || |||||||| |||||||| |||||||| ||||| | || |||||||| |||| Sbjct: 1354 tgcgcgataggcctcctggtcatgagtgggagcttgaaccaagtgttacatgtggggact 1413 Query: 184 acttgtttgggatgttgcagggtacacgttctgctctttattctaatgaccgggagtcca 243 |||||||||| ||| | || || || ||||| ||||||||| | |||||||| || || | Sbjct: 1414 acttgtttggaatgctacatggaactcgttcagctctttatgcaaatgaccgcgaatcta 1473 Query: 244 tctccgttaccgtgcaagaagtaactcccagagccgttggagcactggttgcactctatg 303 | | || || || |||||||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1474 ttacagtcactgtccaagaagtaaaccctagagctgttggagcacttgttgcactctatg 1533 Query: 304 aacgtgcagttggaatttatgcttctttagtaaacatcaatgcatatcatcagcctggtg 363 | ||||| || || ||||||||| |||| | ||||||||||| |||||||| ||||||| Sbjct: 1534 agcgtgctgtcggtctttatgcttatttaatcaacatcaatgcctatcatcaacctggtg 1593 Query: 364 tcgaggcagggaaaaaagcagcaggagaggtattggcacttcagaaaagggtgctgactg 423 |||| ||||||||||| || || |||||||| |||||||||||||||||| | || || Sbjct: 1594 tcgaagcagggaaaaaggctgctggagaggtgttggcacttcagaaaaggatcctacttg 1653 Query: 424 ttctcaatgaagccagttgcaaagaccctgctgaaccattgaccctggagcaaatcgcag 483 |||| || |||||||| ||||| ||||||||||| |||||||| ||||| ||||| |||| Sbjct: 1654 ttcttaacgaagccagctgcaaggaccctgctgagccattgacactggatcaaattgcag 1713 Query: 484 atcgttgccattgccccgaagatattgagatgatatacaaaataattcagcacatggcag 543 |||| ||||| || || ||||| || || ||||||||||||||||| || |||||||| | Sbjct: 1714 atcgctgccactgtcctgaagagatcgaaatgatatacaaaataatccaacacatggctg 1773 Query: 544 ccaatgatagagcacttatagcagaag 570 | || |||||||| ||||| ||||||| Sbjct: 1774 caaacgatagagctcttattgcagaag 1800
>dbj|AK107494.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D06, full insert sequence Length = 2068 Score = 428 bits (216), Expect = e-117 Identities = 481/567 (84%), Gaps = 2/567 (0%) Strand = Plus / Plus Query: 4 aatcgggttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagcatg 63 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 1236 aatcgggttaatcagggactaactgtttatggtaacaaagg-aagcacag-accagcatg 1293 Query: 64 cttacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttt 123 | |||||||| ||||| |||||||| |||||||||||||||||||||||||| || |||| Sbjct: 1294 cctacattcagcagctgagagaaggtgtgcacaacttctttgttacttttattgaagttt 1353 Query: 124 tgcgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgact 183 |||| || |||||||| |||||||| |||||||| ||||| | || |||||||| |||| Sbjct: 1354 tgcgcgataggcctcctggtcatgagtgggagcttgaaccaagtgttacatgtggggact 1413 Query: 184 acttgtttgggatgttgcagggtacacgttctgctctttattctaatgaccgggagtcca 243 |||||||||| ||| | || || || ||||| ||||||||| | |||||||| || || | Sbjct: 1414 acttgtttggaatgctacatggaactcgttcagctctttatgcaaatgaccgcgaatcta 1473 Query: 244 tctccgttaccgtgcaagaagtaactcccagagccgttggagcactggttgcactctatg 303 | | || || || |||||||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1474 ttacagtcactgtccaagaagtaaaccctagagctgttggagcacttgttgcactctatg 1533 Query: 304 aacgtgcagttggaatttatgcttctttagtaaacatcaatgcatatcatcagcctggtg 363 | ||||| || || ||||||||| |||| | ||||||||||| |||||||| ||||||| Sbjct: 1534 agcgtgctgtcggtctttatgcttatttaatcaacatcaatgcctatcatcaacctggtg 1593 Query: 364 tcgaggcagggaaaaaagcagcaggagaggtattggcacttcagaaaagggtgctgactg 423 |||| ||||||||||| || || |||||||| |||||||||||||||||| | || || Sbjct: 1594 tcgaagcagggaaaaaggctgctggagaggtgttggcacttcagaaaaggatcctacttg 1653 Query: 424 ttctcaatgaagccagttgcaaagaccctgctgaaccattgaccctggagcaaatcgcag 483 |||| || |||||||| ||||| ||||||||||| |||||||| ||||| ||||| |||| Sbjct: 1654 ttcttaacgaagccagctgcaaggaccctgctgagccattgacactggatcaaattgcag 1713 Query: 484 atcgttgccattgccccgaagatattgagatgatatacaaaataattcagcacatggcag 543 |||| ||||| || || ||||| || || ||||||||||||||||| || |||||||| | Sbjct: 1714 atcgctgccactgtcctgaagagatcgaaatgatatacaaaataatccaacacatggctg 1773 Query: 544 ccaatgatagagcacttatagcagaag 570 | || |||||||| ||||| ||||||| Sbjct: 1774 caaacgatagagctcttattgcagaag 1800
>gb|AY109946.1| Zea mays CL9211_1 mRNA sequence Length = 1576 Score = 311 bits (157), Expect = 1e-81 Identities = 238/265 (89%) Strand = Plus / Minus Query: 106 ttacttttatagaggttttgcgtgacaggcctccgggtcatgattgggagctcgaacctg 165 |||| ||||| ||||| ||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 766 ttacgtttattgaggtcttgcgtgacaggcctgctggtcatgattgggagcttgaacctg 707 Query: 166 gagtcacatgtggtgactacttgtttgggatgttgcagggtacacgttctgctctttatt 225 ||||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 706 gagtcacgtgtggtgactatttgtttgggatgttgcagggaacccgttctgctctttatg 647 Query: 226 ctaatgaccgggagtccatctccgttaccgtgcaagaagtaactcccagagccgttggag 285 | |||||||||||||| ||||| ||||| |||||||| |||||||| ||||| ||||||| Sbjct: 646 caaatgaccgggagtctatctctgttactgtgcaagaggtaactcctagagctgttggag 587 Query: 286 cactggttgcactctatgaacgtgcagttggaatttatgcttctttagtaaacatcaatg 345 ||||| ||||||| ||||||||||| || || |||||||||||||| ||||| ||||||| Sbjct: 586 cactgattgcactttatgaacgtgctgtggggatttatgcttctttggtaaatatcaatg 527 Query: 346 catatcatcagcctggtgtcgaggc 370 | ||||||||||||||||| ||||| Sbjct: 526 cctatcatcagcctggtgttgaggc 502 Score = 135 bits (68), Expect = 2e-28 Identities = 149/176 (84%) Strand = Plus / Minus Query: 395 attggcacttcagaaaagggtgctgactgttctcaatgaagccagttgcaaagaccctgc 454 |||||| ||||||||||||||||||||||| | ||||| || | ||||| |||||| Sbjct: 477 attggcccttcagaaaagggtgctgactgtattaaatgaggcaacctgcaaggacccttg 418 Query: 455 tgaaccattgaccctggagcaaatcgcagatcgttgccattgccccgaagatattgagat 514 ||| |||||||| | || |||| |||||||| ||||||||||| |||||||||||||| Sbjct: 417 tgagccattgactatagatgaaattgcagatcgctgccattgccctgaagatattgagat 358 Query: 515 gatatacaaaataattcagcacatggcagccaatgatagagcacttatagcagaag 570 ||| ||||||||| | ||||||||||| || || || ||||||||||||||||||| Sbjct: 357 gatctacaaaatagtccagcacatggctgctaacgacagagcacttatagcagaag 302 Score = 65.9 bits (33), Expect = 1e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 ggcaatcgggttaatcaagggctaactgtntatggtaacaaagg 44 ||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 869 ggcaaccgtgttaatcaagggctaactgtatatggtaacaaagg 826
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 192 bits (97), Expect = 9e-46 Identities = 148/165 (89%) Strand = Plus / Minus Query: 198 ttgcagggtacacgttctgctctttattctaatgaccgggagtccatctccgttaccgtg 257 |||||||| || |||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 17595361 ttgcagggaacccgttctgctctttattctaatgaccgagaatccatctccgttactgtg 17595302 Query: 258 caagaagtaactcccagagccgttggagcactggttgcactctatgaacgtgcagttgga 317 |||||||| ||||| || || |||||||| |||||||| || ||||||||||| || || Sbjct: 17595301 caagaagttactcctagggctgttggagcgctggttgctctatatgaacgtgctgtgggg 17595242 Query: 318 atttatgcttctttagtaaacatcaatgcatatcatcagcctggt 362 |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 17595241 atttatgcttctttagtaaatatcaatgcctatcatcagcctggt 17595197 Score = 180 bits (91), Expect = 3e-42 Identities = 127/139 (91%) Strand = Plus / Minus Query: 66 tacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttg 125 |||||||| ||||| |||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 17595575 tacattcagcagctgagagaaggtgtacacaacttcttcgttacttttattgaggttttg 17595516 Query: 126 cgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactac 185 ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 17595515 cgtgataggcctcctggtcatgattgggagcttgaacctggagttacatgtggtgactat 17595456 Query: 186 ttgtttgggatgttgcagg 204 ||||| ||||||||||||| Sbjct: 17595455 ttgttcgggatgttgcagg 17595437 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 507 attgagatgatatacaaaataattcagcacatggcagccaatgatagagcacttatagca 566 ||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 17594271 attgagatgatatacaaaataatccagcacatggcagcaaatgatagagcgctcatagca 17594212 Query: 567 gaag 570 |||| Sbjct: 17594211 gaag 17594208 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 360 ggtgtcgaggcagggaaaaaagcagcaggagaggtattggcacttcagaaaagggtgctg 419 ||||| ||||| |||||||| |||||||| || || |||||||||||||| ||||||||| Sbjct: 17595101 ggtgttgaggctgggaaaaaggcagcaggtgaagtgttggcacttcagaagagggtgctg 17595042 Query: 420 actgttctcaatgaagccag 439 |||||||| ||||| ||||| Sbjct: 17595041 actgttctgaatgaggccag 17595022 Score = 50.1 bits (25), Expect = 0.008 Identities = 33/36 (91%) Strand = Plus / Minus Query: 9 ggttaatcaagggctaactgtntatggtaacaaagg 44 |||||||||||| |||||||| ||||| |||||||| Sbjct: 17595721 ggttaatcaaggtctaactgtgtatggcaacaaagg 17595686
>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1005_D12 Length = 150588 Score = 192 bits (97), Expect = 9e-46 Identities = 148/165 (89%) Strand = Plus / Minus Query: 198 ttgcagggtacacgttctgctctttattctaatgaccgggagtccatctccgttaccgtg 257 |||||||| || |||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 44083 ttgcagggaacccgttctgctctttattctaatgaccgagaatccatctccgttactgtg 44024 Query: 258 caagaagtaactcccagagccgttggagcactggttgcactctatgaacgtgcagttgga 317 |||||||| ||||| || || |||||||| |||||||| || ||||||||||| || || Sbjct: 44023 caagaagttactcctagggctgttggagcgctggttgctctatatgaacgtgctgtgggg 43964 Query: 318 atttatgcttctttagtaaacatcaatgcatatcatcagcctggt 362 |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 43963 atttatgcttctttagtaaatatcaatgcctatcatcagcctggt 43919 Score = 180 bits (91), Expect = 3e-42 Identities = 127/139 (91%) Strand = Plus / Minus Query: 66 tacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttg 125 |||||||| ||||| |||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 44297 tacattcagcagctgagagaaggtgtacacaacttcttcgttacttttattgaggttttg 44238 Query: 126 cgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactac 185 ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 44237 cgtgataggcctcctggtcatgattgggagcttgaacctggagttacatgtggtgactat 44178 Query: 186 ttgtttgggatgttgcagg 204 ||||| ||||||||||||| Sbjct: 44177 ttgttcgggatgttgcagg 44159 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 507 attgagatgatatacaaaataattcagcacatggcagccaatgatagagcacttatagca 566 ||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 42993 attgagatgatatacaaaataatccagcacatggcagcaaatgatagagcgctcatagca 42934 Query: 567 gaag 570 |||| Sbjct: 42933 gaag 42930 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 360 ggtgtcgaggcagggaaaaaagcagcaggagaggtattggcacttcagaaaagggtgctg 419 ||||| ||||| |||||||| |||||||| || || |||||||||||||| ||||||||| Sbjct: 43823 ggtgttgaggctgggaaaaaggcagcaggtgaagtgttggcacttcagaagagggtgctg 43764 Query: 420 actgttctcaatgaagccag 439 |||||||| ||||| ||||| Sbjct: 43763 actgttctgaatgaggccag 43744 Score = 50.1 bits (25), Expect = 0.008 Identities = 33/36 (91%) Strand = Plus / Minus Query: 9 ggttaatcaagggctaactgtntatggtaacaaagg 44 |||||||||||| |||||||| ||||| |||||||| Sbjct: 44443 ggttaatcaaggtctaactgtgtatggcaacaaagg 44408
>gb|AY690424.1| Lycopersicon esculentum cultivar Rutgers glucose-6-phosphate isomerase (GPI) mRNA, complete cds Length = 2222 Score = 167 bits (84), Expect = 5e-38 Identities = 270/332 (81%) Strand = Plus / Plus Query: 60 catgcttacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagag 119 ||||| || |||||||| ||| ||||||| |||||||| ||||||| || ||||| || Sbjct: 1402 catgcctatattcaacaactacgagaaggtgtgcacaatttctttgcgacatttattgaa 1461 Query: 120 gttttgcgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggt 179 || |||||||| ||||| || ||||||||||||||||| |||||||| || || ||||| Sbjct: 1462 gtattgcgtgataggccccctggtcatgattgggagcttgaacctggcgttacttgtggc 1521 Query: 180 gactacttgtttgggatgttgcagggtacacgttctgctctttattctaatgaccgggag 239 |||||| | ||||| ||||| ||||| ||| | || ||||| ||||| || || |||||| Sbjct: 1522 gactacctctttggaatgttacagggaacaaggtcagctctgtattcgaacgatcgggag 1581 Query: 240 tccatctccgttaccgtgcaagaagtaactcccagagccgttggagcactggttgcactc 299 |||||| | || || ||||| ||||| || || ||| | |||||||| || || |||||| Sbjct: 1582 tccatcacagtcactgtgcaggaagtgacacctagatctgttggagctctagtagcactc 1641 Query: 300 tatgaacgtgcagttggaatttatgcttctttagtaaacatcaatgcatatcatcagcct 359 ||||| || || ||||| ||||||||||| | || ||||| || || |||||||| ||| Sbjct: 1642 tatgagcgagctgttgggatttatgcttcacttgtcaacattaacgcttatcatcaacct 1701 Query: 360 ggtgtcgaggcagggaaaaaagcagcaggaga 391 ||||| || || ||||||||||| || ||||| Sbjct: 1702 ggtgtggaagctgggaaaaaagctgctggaga 1733
>gb|BT013471.1| Lycopersicon esculentum clone 132132R, mRNA sequence Length = 2231 Score = 167 bits (84), Expect = 5e-38 Identities = 270/332 (81%) Strand = Plus / Plus Query: 60 catgcttacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagag 119 ||||| || |||||||| ||| ||||||| |||||||| ||||||| || ||||| || Sbjct: 1382 catgcctatattcaacaactacgagaaggtgtgcacaatttctttgcgacatttattgaa 1441 Query: 120 gttttgcgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggt 179 || |||||||| ||||| || ||||||||||||||||| |||||||| || || ||||| Sbjct: 1442 gtattgcgtgataggccccctggtcatgattgggagcttgaacctggcgttacttgtggc 1501 Query: 180 gactacttgtttgggatgttgcagggtacacgttctgctctttattctaatgaccgggag 239 |||||| | ||||| ||||| ||||| ||| | || ||||| ||||| || || |||||| Sbjct: 1502 gactacctctttggaatgttacagggaacaaggtcagctctgtattcgaacgatcgggag 1561 Query: 240 tccatctccgttaccgtgcaagaagtaactcccagagccgttggagcactggttgcactc 299 |||||| | || || ||||| ||||| || || ||| | |||||||| || || |||||| Sbjct: 1562 tccatcacagtcactgtgcaggaagtgacacctagatctgttggagctctagtagcactc 1621 Query: 300 tatgaacgtgcagttggaatttatgcttctttagtaaacatcaatgcatatcatcagcct 359 ||||| || || ||||| ||||||||||| | || ||||| || || |||||||| ||| Sbjct: 1622 tatgagcgagctgttgggatttatgcttcacttgtcaacattaacgcttatcatcaacct 1681 Query: 360 ggtgtcgaggcagggaaaaaagcagcaggaga 391 ||||| || || ||||||||||| || ||||| Sbjct: 1682 ggtgtggaagctgggaaaaaagctgctggaga 1713
>emb|AJ000265.1|SOJ00265 Spinacia oleracea mRNA (nuclear-encoded) for chloroplast glucose-6-phosphate isomerase Length = 2142 Score = 163 bits (82), Expect = 8e-37 Identities = 419/529 (79%), Gaps = 2/529 (0%) Strand = Plus / Plus Query: 19 gggctaactgtntatggtaacaaaggnaagcacagnaccagcatgcttacattcaacagc 78 ||||| ||||| ||||| || ||||| |||||||| |||||||||| ||||||||||| | Sbjct: 1320 gggcttactgtctatggaaataaagg-aagcacag-accagcatgcctacattcaacaac 1377 Query: 79 taagagaaggggtgcacaacttctttgttacttttatagaggttttgcgtgacaggcctc 138 | || || || || || |||||||||| || ||||| || || |||||||| || |||| Sbjct: 1378 tgagggatggtgttcataacttctttgccacatttatcgaagtattgcgtgatagacctc 1437 Query: 139 cgggtcatgattgggagctcgaacctggagtcacatgtggtgactacttgtttgggatgt 198 | |||||||| |||||||| ||||| || || |||||||||||||| | ||||| |||| Sbjct: 1438 caggtcatgactgggagctagaaccaggtgtgacatgtggtgactatctctttggaatgt 1497 Query: 199 tgcagggtacacgttctgctctttattctaatgaccgggagtccatctccgttaccgtgc 258 | ||||| ||| | || ||||| ||| | ||| |||| || || || ||||| ||||||| Sbjct: 1498 tacaggggacaagatcagctctatatgcaaataaccgtgaatctatttccgtcaccgtgc 1557 Query: 259 aagaagtaactcccagagccgttggagcactggttgcactctatgaacgtgcagttggaa 318 |||||||||| || || | || || ||| |||| || || |||||||| || ||||| Sbjct: 1558 aagaagtaacacctaggtcagtcggcgcaatggtagccctatatgaacgagctgttgggc 1617 Query: 319 tttatgcttctttagtaaacatcaatgcatatcatcagcctggtgtcgaggcagggaaaa 378 | || || || | || ||||| ||||| |||||||| || ||||| |||||||| |||| Sbjct: 1618 tatacgcctcacttgtcaacataaatgcgtatcatcaaccaggtgtggaggcaggtaaaa 1677 Query: 379 aagcagcaggagaggtattggcacttcagaaaagggtgctgactgttctcaatgaagcca 438 |||| |||| ||||||||| || ||||||||| | || ||| |||| ||||| || |||| Sbjct: 1678 aagctgcagcagaggtattagctcttcagaaacgagttctggctgtgctcaacgaggcca 1737 Query: 439 gttgcaaagaccctgctgaaccattgaccctggagcaaatcgcagatcgttgccattgcc 498 | ||||| || || | ||| |||||||| | || || | || || | ||| ||||||| Sbjct: 1738 gctgcaaggatcccgttgagccattgacgattgaagaagtggctgaccattgtcattgcc 1797 Query: 499 ccgaagatattgagatgatatacaaaataattcagcacatggcagccaa 547 |||| ||||| || ||||| ||||||||||| |||||||||||||| Sbjct: 1798 ccgatgatatcgaaatgatttacaaaataatcgctcacatggcagccaa 1846
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 66 tacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttg 125 |||||||| ||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 23617718 tacattcagcagctgagagaaggtgtgcacaacttctttgttacttttattgaagttttg 23617659 Query: 126 cgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactac 185 || || |||||||| |||||||| |||||||| ||||| | || |||||||| |||||| Sbjct: 23617658 cgcgataggcctcctggtcatgagtgggagcttgaaccaagtgttacatgtggggactac 23617599 Query: 186 ttgtttgg 193 |||||||| Sbjct: 23617598 ttgtttgg 23617591 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Minus Query: 258 caagaagtaactcccagagccgttggagcactggttgcactctatgaacgtgcagttgga 317 |||||||||| || ||||| ||||||||||| |||||||||||||| ||||| || || Sbjct: 23617432 caagaagtaaaccctagagctgttggagcacttgttgcactctatgagcgtgctgtcggt 23617373 Query: 318 atttatgcttctttagtaaacatcaatgcatatcatcagcctggt 362 ||||||||| |||| | ||||||||||| |||||||| |||||| Sbjct: 23617372 ctttatgcttatttaatcaacatcaatgcctatcatcaacctggt 23617328 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 360 ggtgtcgaggcagggaaaaaagcagcaggagaggtattggcacttcagaaaagg 413 |||||||| ||||||||||| || || |||||||| |||||||||||||||||| Sbjct: 23617239 ggtgtcgaagcagggaaaaaggctgctggagaggtgttggcacttcagaaaagg 23617186 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 436 ccagttgcaaagaccctgctgaaccattgaccctggagcaaatcgcagatcgttgcca 493 |||| ||||| ||||||||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct: 23616541 ccagctgcaaggaccctgctgagccattgacactggatcaaattgcagatcgctgcca 23616484 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 513 atgatatacaaaataattcagcacatggcagccaatgatagagcacttatagcagaag 570 ||||||||||||||||| || |||||||| || || |||||||| ||||| ||||||| Sbjct: 23616375 atgatatacaaaataatccaacacatggctgcaaacgatagagctcttattgcagaag 23616318 Score = 58.0 bits (29), Expect = 3e-05 Identities = 51/56 (91%), Gaps = 2/56 (3%) Strand = Plus / Minus Query: 9 ggttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagcatgc 64 ||||||||| || |||||||| |||||||||||||| |||||||| |||||||||| Sbjct: 23617873 ggttaatcagggactaactgtttatggtaacaaagg-aagcacag-accagcatgc 23617820
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 66 tacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttg 125 |||||||| ||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 25314 tacattcagcagctgagagaaggtgtgcacaacttctttgttacttttattgaagttttg 25255 Query: 126 cgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactac 185 || || |||||||| |||||||| |||||||| ||||| | || |||||||| |||||| Sbjct: 25254 cgcgataggcctcctggtcatgagtgggagcttgaaccaagtgttacatgtggggactac 25195 Query: 186 ttgtttgg 193 |||||||| Sbjct: 25194 ttgtttgg 25187 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Minus Query: 258 caagaagtaactcccagagccgttggagcactggttgcactctatgaacgtgcagttgga 317 |||||||||| || ||||| ||||||||||| |||||||||||||| ||||| || || Sbjct: 25028 caagaagtaaaccctagagctgttggagcacttgttgcactctatgagcgtgctgtcggt 24969 Query: 318 atttatgcttctttagtaaacatcaatgcatatcatcagcctggt 362 ||||||||| |||| | ||||||||||| |||||||| |||||| Sbjct: 24968 ctttatgcttatttaatcaacatcaatgcctatcatcaacctggt 24924 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 360 ggtgtcgaggcagggaaaaaagcagcaggagaggtattggcacttcagaaaagg 413 |||||||| ||||||||||| || || |||||||| |||||||||||||||||| Sbjct: 24835 ggtgtcgaagcagggaaaaaggctgctggagaggtgttggcacttcagaaaagg 24782 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 436 ccagttgcaaagaccctgctgaaccattgaccctggagcaaatcgcagatcgttgcca 493 |||| ||||| ||||||||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct: 24137 ccagctgcaaggaccctgctgagccattgacactggatcaaattgcagatcgctgcca 24080 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 513 atgatatacaaaataattcagcacatggcagccaatgatagagcacttatagcagaag 570 ||||||||||||||||| || |||||||| || || |||||||| ||||| ||||||| Sbjct: 23971 atgatatacaaaataatccaacacatggctgcaaacgatagagctcttattgcagaag 23914 Score = 58.0 bits (29), Expect = 3e-05 Identities = 51/56 (91%), Gaps = 2/56 (3%) Strand = Plus / Minus Query: 9 ggttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagcatgc 64 ||||||||| || |||||||| |||||||||||||| |||||||| |||||||||| Sbjct: 25469 ggttaatcagggactaactgtttatggtaacaaagg-aagcacag-accagcatgc 25416
>ref|NM_118595.3| Arabidopsis thaliana PGI1 (CHLOROPLASTIC PHOSPHOGLUCOSE ISOMERASE) AT4G24620 (PGI1) mRNA, complete cds Length = 2272 Score = 83.8 bits (42), Expect = 6e-13 Identities = 153/188 (81%), Gaps = 2/188 (1%) Strand = Plus / Plus Query: 10 gttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagcatgcttaca 69 |||||||||||| ||||||| ||||| || || || |||||||| | ||||| || |||| Sbjct: 1428 gttaatcaagggttaactgtgtatggaaataa-gggaagcacag-atcagcacgcctaca 1485 Query: 70 ttcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttgcgtg 129 |||||||||| ||||| || |||||||| ||||||| || || ||||| || || || | Sbjct: 1486 ttcaacagctgagagatggtgtgcacaatttctttgcaaccttcatagaagtgttacggg 1545 Query: 130 acaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactacttgt 189 |||| || || ||||| ||||||||||| || || || ||||| ||||| ||||| | | Sbjct: 1546 acagaccccctggtcacgattgggagcttgagccaggtgtcacttgtggagactatctct 1605 Query: 190 ttgggatg 197 |||||||| Sbjct: 1606 ttgggatg 1613
>gb|BT000953.1| Arabidopsis thaliana clone C105270 putative glucose-6-phosphate isomerase (At4g24620) mRNA, complete cds Length = 1873 Score = 83.8 bits (42), Expect = 6e-13 Identities = 153/188 (81%), Gaps = 2/188 (1%) Strand = Plus / Plus Query: 10 gttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagcatgcttaca 69 |||||||||||| ||||||| ||||| || || || |||||||| | ||||| || |||| Sbjct: 1213 gttaatcaagggttaactgtgtatggaaataa-gggaagcacag-atcagcacgcctaca 1270 Query: 70 ttcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttgcgtg 129 |||||||||| ||||| || |||||||| ||||||| || || ||||| || || || | Sbjct: 1271 ttcaacagctgagagatggtgtgcacaatttctttgcaaccttcatagaagtgttacggg 1330 Query: 130 acaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactacttgt 189 |||| || || ||||| ||||||||||| || || || ||||| ||||| ||||| | | Sbjct: 1331 acagaccccctggtcacgattgggagcttgagccaggtgtcacttgtggagactatctct 1390 Query: 190 ttgggatg 197 |||||||| Sbjct: 1391 ttgggatg 1398
>gb|AY080758.1| Arabidopsis thaliana At4g24620 mRNA sequence Length = 2050 Score = 83.8 bits (42), Expect = 6e-13 Identities = 153/188 (81%), Gaps = 2/188 (1%) Strand = Plus / Plus Query: 10 gttaatcaagggctaactgtntatggtaacaaaggnaagcacagnaccagcatgcttaca 69 |||||||||||| ||||||| ||||| || || || |||||||| | ||||| || |||| Sbjct: 1251 gttaatcaagggttaactgtgtatggaaataa-gggaagcacag-atcagcacgcctaca 1308 Query: 70 ttcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttgcgtg 129 |||||||||| ||||| || |||||||| ||||||| || || ||||| || || || | Sbjct: 1309 ttcaacagctgagagatggtgtgcacaatttctttgcaaccttcatagaagtgttacggg 1368 Query: 130 acaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactacttgt 189 |||| || || ||||| ||||||||||| || || || ||||| ||||| ||||| | | Sbjct: 1369 acagaccccctggtcacgattgggagcttgagccaggtgtcacttgtggagactatctct 1428 Query: 190 ttgggatg 197 |||||||| Sbjct: 1429 ttgggatg 1436
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 63.9 bits (32), Expect = 5e-07 Identities = 107/132 (81%) Strand = Plus / Minus Query: 66 tacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttg 125 |||||||||||||| ||||| || |||||||| ||||||| || || ||||| || || Sbjct: 177607 tacattcaacagctgagagatggtgtgcacaatttctttgcaaccttcatagaagtgtta 177548 Query: 126 cgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactac 185 || ||||| || || ||||| ||||||||||| || || || ||||| ||||| ||||| Sbjct: 177547 cgggacagaccccctggtcacgattgggagcttgagccaggtgtcacttgtggagactat 177488 Query: 186 ttgtttgggatg 197 | ||||||||| Sbjct: 177487 ctctttgggatg 177476 Score = 40.1 bits (20), Expect = 7.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 9 ggttaatcaagggctaactgtntatgg 35 ||||||||||||| ||||||| ||||| Sbjct: 177753 ggttaatcaagggttaactgtgtatgg 177727
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project) Length = 125803 Score = 63.9 bits (32), Expect = 5e-07 Identities = 107/132 (81%) Strand = Plus / Plus Query: 66 tacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttg 125 |||||||||||||| ||||| || |||||||| ||||||| || || ||||| || || Sbjct: 71303 tacattcaacagctgagagatggtgtgcacaatttctttgcaaccttcatagaagtgtta 71362 Query: 126 cgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactac 185 || ||||| || || ||||| ||||||||||| || || || ||||| ||||| ||||| Sbjct: 71363 cgggacagaccccctggtcacgattgggagcttgagccaggtgtcacttgtggagactat 71422 Query: 186 ttgtttgggatg 197 | ||||||||| Sbjct: 71423 ctctttgggatg 71434 Score = 40.1 bits (20), Expect = 7.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 9 ggttaatcaagggctaactgtntatgg 35 ||||||||||||| ||||||| ||||| Sbjct: 71157 ggttaatcaagggttaactgtgtatgg 71183
>gb|AF120494.1|AF120494 Arabidopsis thaliana phosphoglucose isomerase precursor (PGI) gene, complete cds; nuclear gene for chloroplast product Length = 4176 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 66 tacattcaacagctaagagaaggggtgcacaacttctttgttacttttatagaggttttg 125 |||||||||||||| ||||| || |||||||| ||||||| || || ||||| || || Sbjct: 3035 tacattcaacagctgagagatggtgtgcacaatttctttgcaaccttcatagaagtgtta 3094 Query: 126 cgtgacaggcctccgggtcatgattgggagctcgaacctggagtcacatgtggtgactac 185 || |||| || || ||||| ||||||||||| || || || ||||| ||||| ||||| Sbjct: 3095 cggtacagaccccctggtcacgattgggagcttgagccaggtgtcacttgtggagactat 3154 Query: 186 ttgtttgggatg 197 | ||||||||| Sbjct: 3155 ctctttgggatg 3166 Score = 40.1 bits (20), Expect = 7.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 9 ggttaatcaagggctaactgtntatgg 35 ||||||||||||| ||||||| ||||| Sbjct: 2890 ggttaatcaagggttaactgtgtatgg 2916
>gb|AC131565.1| Homo sapiens chromosome 5 clone RP11-1273L8, complete sequence Length = 181283 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 400 cacttcagaaaagggtgctgac 421 |||||||||||||||||||||| Sbjct: 86889 cacttcagaaaagggtgctgac 86868
>gb|AC108105.2| Homo sapiens chromosome 5 clone RP11-209B12, complete sequence Length = 162993 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 tcaatgaagccagttgcaaaga 448 |||||||||||||||||||||| Sbjct: 42451 tcaatgaagccagttgcaaaga 42430
>gb|AC114959.2| Homo sapiens chromosome 5 clone RP11-170L13, complete sequence Length = 163805 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 400 cacttcagaaaagggtgctgac 421 |||||||||||||||||||||| Sbjct: 95577 cacttcagaaaagggtgctgac 95598
>gb|AC011368.5| Homo sapiens chromosome 5 clone CTB-104K23, complete sequence Length = 113582 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 400 cacttcagaaaagggtgctgac 421 |||||||||||||||||||||| Sbjct: 46702 cacttcagaaaagggtgctgac 46723
>gb|AC140677.1| Homo sapiens chromosome 5 clone CTC-778L3, complete sequence Length = 121010 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 400 cacttcagaaaagggtgctgac 421 |||||||||||||||||||||| Sbjct: 96467 cacttcagaaaagggtgctgac 96488
>gb|AC144714.4| Mus musculus BAC clone RP24-371M20 from chromosome 8, complete sequence Length = 176994 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 tatacaaaataattcagcaca 537 ||||||||||||||||||||| Sbjct: 141498 tatacaaaataattcagcaca 141478
>ref|XM_989461.1| PREDICTED: Mus musculus protein disulfide isomerase associated 2 (Pdia2), mRNA Length = 1721 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 caaaataattcagcacatggc 541 ||||||||||||||||||||| Sbjct: 1042 caaaataattcagcacatggc 1022
>ref|XM_994270.1| PREDICTED: Mus musculus protein disulfide isomerase associated 2 (Pdia2), mRNA Length = 1720 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 caaaataattcagcacatggc 541 ||||||||||||||||||||| Sbjct: 1041 caaaataattcagcacatggc 1021
>ref|XM_128552.3| PREDICTED: Mus musculus protein disulfide isomerase associated 2 (Pdia2), mRNA Length = 1721 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 caaaataattcagcacatggc 541 ||||||||||||||||||||| Sbjct: 1042 caaaataattcagcacatggc 1022
>gb|AC126438.3| Mus musculus BAC clone RP24-255G1 from chromosome 17, complete sequence Length = 152802 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 caaaataattcagcacatggc 541 ||||||||||||||||||||| Sbjct: 108220 caaaataattcagcacatggc 108200
>dbj|AK007743.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810041F13 product:similar to PROTEIN DISULFIDE ISOMERASE PDIP [Homo sapiens], full insert sequence Length = 1667 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 caaaataattcagcacatggc 541 ||||||||||||||||||||| Sbjct: 991 caaaataattcagcacatggc 971
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 339 atcaatgcatatcatcagcctggtgtcgaggcagggaaaaaagcagcag 387 |||||||| || |||||||| || || || || |||||||||||||||| Sbjct: 736637 atcaatgcctaccatcagccgggggtggaagctgggaaaaaagcagcag 736589
>gb|AC172890.2| Mus musculus BAC clone RP24-337A4 from chromosome 7, complete sequence Length = 182879 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 tctttgttacttttatagagg 120 ||||||||||||||||||||| Sbjct: 12810 tctttgttacttttatagagg 12830
>gb|AC131802.4| Mus musculus BAC clone RP24-542I6 from 7, complete sequence Length = 174956 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 tctttgttacttttatagagg 120 ||||||||||||||||||||| Sbjct: 99544 tctttgttacttttatagagg 99524
>ref|NM_195427.1| Oryza sativa (japonica cultivar-group) putative gag-pol polyprotein (OSJNBb0091B12.16), mRNA Length = 3006 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 694 aagcagcaggagaggtattg 713
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 102557 aagcagcaggagaggtattg 102538
>gb|AC145296.3| Mus musculus BAC clone RP24-404G7 from chromosome Y, complete sequence Length = 183159 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 atatacaaaataattcagca 535 |||||||||||||||||||| Sbjct: 174346 atatacaaaataattcagca 174327
>gb|AC182424.4| Mus musculus BAC clone RP24-364J10 from chromosome y, complete sequence Length = 153116 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 atatacaaaataattcagca 535 |||||||||||||||||||| Sbjct: 136142 atatacaaaataattcagca 136161
>gb|AC142255.3| Mus musculus BAC clone RP24-511N9 from chromosome Y, complete sequence Length = 149721 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 atatacaaaataattcagca 535 |||||||||||||||||||| Sbjct: 21196 atatacaaaataattcagca 21215
>gb|AC122904.2| Mus musculus BAC clone RP23-46H15 from 1, complete sequence Length = 139848 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 atatacaaaataattcagca 535 |||||||||||||||||||| Sbjct: 122068 atatacaaaataattcagca 122049
>gb|AC113597.12| Mus musculus chromosome 1, clone RP23-375F6, complete sequence Length = 224996 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 atatacaaaataattcagca 535 |||||||||||||||||||| Sbjct: 192525 atatacaaaataattcagca 192544
>gb|AC157648.18| Medicago truncatula clone mth2-68d9, complete sequence Length = 84361 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 cttctttagtaaacatcaat 344 |||||||||||||||||||| Sbjct: 61657 cttctttagtaaacatcaat 61676
>emb|CR376754.6| Zebrafish DNA sequence from clone CH211-254O14 in linkage group 2, complete sequence Length = 84275 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atacaaaataattcagcaca 537 |||||||||||||||||||| Sbjct: 42020 atacaaaataattcagcaca 42039
>gb|AC093178.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0091B12, complete sequence Length = 137568 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 116502 aagcagcaggagaggtattg 116483
>gb|AC099059.2| Homo sapiens chromosome 3 clone RP11-756A10, complete sequence Length = 158576 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 ttggcacttcagaaaagggt 415 |||||||||||||||||||| Sbjct: 53601 ttggcacttcagaaaagggt 53620
>gb|AC023173.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-11G22, complete sequence Length = 203451 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ttgtttgggatgttgcaggg 205 |||||||||||||||||||| Sbjct: 93708 ttgtttgggatgttgcaggg 93727
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 10932064 aagcagcaggagaggtattg 10932045
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 6913475 aagcagcaggagaggtattg 6913456
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 4480933 aagcagcaggagaggtattg 4480914
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 14255211 aagcagcaggagaggtattg 14255192
>emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012A12, complete sequence Length = 122766 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 35129 aagcagcaggagaggtattg 35110
>emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 in linkage group 20, complete sequence Length = 197237 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggagtcacatgtggtgacta 184 |||||||||||||||||||| Sbjct: 71422 ggagtcacatgtggtgacta 71441
>dbj|AP004151.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_E02 Length = 125860 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 60361 aagcagcaggagaggtattg 60342
>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence Length = 267826 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 agatattgagatgatataca 522 |||||||||||||||||||| Sbjct: 188837 agatattgagatgatataca 188818
>emb|AL935332.12| Zebrafish DNA sequence from clone DKEY-77F17 in linkage group 18, complete sequence Length = 139084 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 agatattgagatgatataca 522 |||||||||||||||||||| Sbjct: 124945 agatattgagatgatataca 124926
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 339 atcaatgcatatcatcagcctggtgtcgaggcagggaaaaaagc 382 ||||||||||||||||| || || || ||||| || |||||||| Sbjct: 862334 atcaatgcatatcatcaaccgggcgtagaggccggcaaaaaagc 862377
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ttgagatgatatacaaaata 527 |||||||||||||||||||| Sbjct: 1403665 ttgagatgatatacaaaata 1403684
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagcaggagaggtattg 398 |||||||||||||||||||| Sbjct: 6916761 aagcagcaggagaggtattg 6916742 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,636,551 Number of Sequences: 3902068 Number of extensions: 4636551 Number of successful extensions: 130685 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130319 Number of HSP's gapped (non-prelim): 351 length of query: 570 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 547 effective length of database: 17,143,297,704 effective search space: 9377383844088 effective search space used: 9377383844088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)