>ZNF45_HUMAN (Q02386) Zinc finger protein 45 (BRC1744)|
          Length = 682

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
 Frame = -1

Query: 452 HMDQPPYIYHSLSPGPC----LLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPKRSSSF 285
           H  + PY       G C    LL H     GE+   C AC          G    RSS F
Sbjct: 382 HTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDAC----------GKGFSRSSDF 431

Query: 284 HIHLTTHIGKQ 252
           +IH   H G++
Sbjct: 432 NIHFRVHTGEK 442

>ZN418_HUMAN (Q8TF45) Zinc finger protein 418|
          Length = 676

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 18/68 (26%)
 Frame = -1

Query: 401 LLQHVSSSCGERIQTCAAC--------HIIDDSFVSCGPRP----------KRSSSFHIH 276
           L+QH  S  GER   C  C        H+I+   V  G RP          + SS F +H
Sbjct: 441 LIQHQRSHTGERPYECRECRKLFRGKSHLIEHQRVHTGERPYECNECGKSFQDSSGFRVH 500

Query: 275 LTTHIGKQ 252
              H G++
Sbjct: 501 QRVHTGEK 508

>ZN169_HUMAN (Q14929) Zinc finger protein 169|
          Length = 590

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = -1

Query: 452 HMDQPPYIYHSLSPGPC----LLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPKRSSSF 285
           H+++ P++      G C    LLQH SS  GER   C          + CG   ++ S  
Sbjct: 327 HLEEKPFVCPECGRGFCQKASLLQHQSSHTGERPFLC----------LECGRSFRQQSLL 376

Query: 284 HIHLTTHIGKQ 252
             H  TH G++
Sbjct: 377 LSHQVTHSGEK 387

>ZN255_HUMAN (Q9UID9) Zinc finger protein 255 (Bone marrow zinc finger 2)|
           (BMZF-2)
          Length = 623

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -1

Query: 422 SLSPGPCLLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPKRSSSFHIHLTTHIGKQ 252
           S S  PCLL+H     GE+   C            CG R  ++S  H H   H G++
Sbjct: 380 SFSRAPCLLKHERLHSGEKPFQCE----------ECGKRFTQNSHLHSHQRVHTGEK 426

>ZN224_HUMAN (Q9NZL3) Zinc finger protein 224|
          Length = 707

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -1

Query: 422 SLSPGPCLLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPKRSSSFHIHLTTHIGKQ 252
           S S  PCLL+H     GE+   C            CG R  ++S  H H   H G++
Sbjct: 464 SFSRAPCLLKHERLHSGEKPFQCE----------ECGKRFTQNSHLHSHQRVHTGEK 510

>KLF4_HUMAN (O43474) Krueppel-like factor 4 (Epithelial zinc-finger protein|
           EZF) (Gut-enriched krueppel-like factor)
          Length = 470

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -1

Query: 440 PPYIYHSLSP-GPCLLQHVSSSCGERI--QTCAACHIIDDSFVSCGPRPKRSSSFHIHLT 270
           PP  Y  L P G C+ +      G R   +   A H  D  +  CG    +SS    HL 
Sbjct: 352 PPLHYQELMPPGSCMPEEPKPKRGRRSWPRKRTATHTCD--YAGCGKTYTKSSHLKAHLR 409

Query: 269 THIGKQFSRHTSADWE 222
           TH G+   +    DW+
Sbjct: 410 THTGE---KPYHCDWD 422

>AT2A1_RANES (Q92105) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC|
           3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1)
           (Calcium-transporting ATPase sarcoplasmic reticulum
           type, fast twitch skeletal muscle isoform) (Endoplasmic
           reticulum cla
          Length = 994

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 164 HISAEKMSPTEWWFQFGGDVPNLQKYALRIVSQCVSSS 277
           ++ A  +    WWF +  D PN+  Y L    QC   +
Sbjct: 843 YVGAATVGAAAWWFMYADDGPNVTFYQLSHFMQCTEDN 880

>ZN177_HUMAN (Q13360) Zinc finger protein 177|
          Length = 321

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
 Frame = -1

Query: 452 HMDQPPYIYH----SLSPGPCLLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPKRSSSF 285
           H  + PY  +    S S G  L+ H  +  GE+   C            CG   + SS  
Sbjct: 230 HTGEKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECK----------ECGKAFRNSSCL 279

Query: 284 HIHLTTHIGKQ 252
            +H+ TH G++
Sbjct: 280 RVHVRTHTGEK 290

>INP4A_RAT (Q62784) Type I inositol-3,4-bisphosphate 4-phosphatase (EC|
           3.1.3.66) (Inositol polyphosphate 4-phosphatase type I)
          Length = 939

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 226 QSAEVCLENCFPMCVVKWM*KELER-LGLGPHETKESS--IIWQAAQVCIR 369
           Q  EV  E+C P    +    EL R LG   H  K  +  I+WQAA+VC R
Sbjct: 798 QFKEVLPEDCLPRSRSQTCLPELLRFLGQNVHARKNKNVDILWQAAEVCRR 848

>INP4A_MOUSE (Q9EPW0) Type I inositol-3,4-bisphosphate 4-phosphatase (EC|
           3.1.3.66) (Inositol polyphosphate 4-phosphatase type I)
          Length = 939

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 226 QSAEVCLENCFPMCVVKWM*KELER-LGLGPHETKESS--IIWQAAQVCIR 369
           Q  EV  E+C P    +    EL R LG   H  K  +  I+WQAA+VC R
Sbjct: 798 QFKEVLPEDCLPRSRSQTCLPELLRFLGQNVHARKNKNVDILWQAAEVCRR 848

>ZN140_HUMAN (P52738) Zinc finger protein 140|
          Length = 457

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 401 LLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPKRSSSFHIHLTTHIGKQ 252
           L+QH  S  GE+   CA C   D +F        RS S  +H  TH G++
Sbjct: 372 LIQHTKSHTGEKPYACAEC---DKAF-------SRSFSLILHQRTHTGEK 411

>KLF4_MOUSE (Q60793) Krueppel-like factor 4 (Gut-enriched krueppel-like factor)|
           (Epithelial zinc-finger protein EZF)
          Length = 474

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
 Frame = -1

Query: 443 QPPYIYHS--LSPGPCLLQHVSSSCGERI--QTCAACHIIDDSFVSCGPRPKRSSSFHIH 276
           Q P +++   + PG CL +      G R   +   A H  D  +  CG    +SS    H
Sbjct: 354 QVPSLHYQELMPPGSCLPEEPKPKRGRRSWPRKRTATHTCD--YAGCGKTYTKSSHLKAH 411

Query: 275 LTTHIGKQFSRHTSADWE 222
           L TH G+   +    DW+
Sbjct: 412 LRTHTGE---KPYHCDWD 426

>INP4A_HUMAN (Q96PE3) Type I inositol-3,4-bisphosphate 4-phosphatase (EC|
           3.1.3.66) (Inositol polyphosphate 4-phosphatase type I)
          Length = 977

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 226 QSAEVCLENCFPMCVVKWM*KELER-LGLGPHETKESS--IIWQAAQVCIR 369
           Q  EV  E+C P    +    EL R LG   H  K  +  I+WQAA++C R
Sbjct: 836 QFKEVLPEDCLPRSRSQTCLPELLRFLGQNVHARKNKNVDILWQAAEICRR 886

>ZNF10_HUMAN (P21506) Zinc finger protein 10 (Zinc finger protein KOX1)|
          Length = 573

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 23/97 (23%)
 Frame = -1

Query: 470 LYSSS-LHMDQPPYIYH----SLSPGPCLLQHVSSSCGERIQTCAAC------------- 345
           LYS    H  + PY  H    S S    L+ H     GE+   C  C             
Sbjct: 448 LYSHQRTHTGEKPYECHDCGKSFSQSSALIVHQRIHTGEKPYECCQCGKAFIRKNDLIKH 507

Query: 344 ---HIIDDSFV--SCGPRPKRSSSFHIHLTTHIGKQF 249
              H+ ++++    CG    ++S F +H   H G+QF
Sbjct: 508 QRIHVGEETYKCNQCGIIFSQNSPFIVHQIAHTGEQF 544

>TAF1A_MOUSE (P97357) TATA box-binding protein-associated factor RNA polymerase|
           I subunit A (TATA box-binding protein-associated factor
           1A) (TBP-associated factor RNA polymerase I 48 kDa)
           (TAFI48)
          Length = 453

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 218 DVPNLQKYALRIVSQCVSSSGCERNWSAWALVHTKQRNRLLYGKLHKFV 364
           D    QK  L ++ + +  +GC +N +AW  +  K   ++L G  H++V
Sbjct: 322 DTEEHQKLGLSVLFEVLDFAGCNKNITAWKYL-AKYLKQILVGSHHEWV 369

>ZN551_HUMAN (Q7Z340) Zinc finger protein 551 (Zinc finger protein KOX23)|
          Length = 670

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 12/96 (12%)
 Frame = -1

Query: 455 LHMDQPPY----IYHSLSPGPCLLQHVSSSCGERIQTCAAC--------HIIDDSFVSCG 312
           +H  + PY       S S    L+QH     GER   C+ C         +I    V  G
Sbjct: 580 VHTGERPYECSECGKSFSQSSSLIQHQRGHTGERPYECSQCGKPFTHKSDLIQHQRVHTG 639

Query: 311 PRPKRSSSFHIHLTTHIGKQFSRHTSADWERPLQTE 204
            RP   S          GK FSR ++    R + TE
Sbjct: 640 ERPYECS--------ECGKSFSRKSNLIRHRRVHTE 667

>ZFP37_RAT (O88553) Zinc finger protein 37 (Zfp-37)|
          Length = 601

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 401 LLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPKRSSSFHIHLTTHIGK 255
           L+QH+ S  GE+   C            CG   + +SSF  H+ TH G+
Sbjct: 358 LMQHIRSHTGEKPYECK----------ECGKSFRYNSSFTEHVRTHTGE 396

>ZN211_HUMAN (Q13398) Zinc finger protein 211 (Zinc finger protein C2H2-25)|
          Length = 367

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = -1

Query: 470 LYSSSLHMDQPPYIYH----SLSPGPCLLQHVSSSCGERIQTCAACHIIDDSFVSCGPRP 303
           +Y   +H  + P+  +    S S    L+ H     GER   C+           CG   
Sbjct: 188 IYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECS----------KCGKSF 237

Query: 302 KRSSSFHIHLTTHIGKQ 252
           K+SSSF  H   H G++
Sbjct: 238 KQSSSFSSHRKVHTGER 254

>ZN669_HUMAN (Q96BR6) Zinc finger protein 669|
          Length = 464

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
 Frame = -1

Query: 467 YSSSLHMDQPPY----IYHSLSPGPCLLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPK 300
           Y  S+H  + PY       + S    L  H S+  GE+   C  C   D +F        
Sbjct: 351 YHGSIHTGERPYECKQCGKAFSRLSSLCNHRSTHTGEKPYECKQC---DQAF-------S 400

Query: 299 RSSSFHIHLTTHIGKQ 252
           R SS H+H   H G++
Sbjct: 401 RLSSLHLHERIHTGEK 416

>ZN221_HUMAN (Q9UK13) Zinc finger protein 221|
          Length = 617

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
 Frame = -1

Query: 467 YSSSLHMDQPPY----IYHSLSPGPCLLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPK 300
           +   +H  + PY       S     CLL+H     GE+   C            CG R  
Sbjct: 467 FHQRVHTGERPYNCKECGKSFGWASCLLKHQRLHSGEKPFKCE----------ECGKRFT 516

Query: 299 RSSSFHIHLTTHIGKQ 252
           +S+  H H T H G++
Sbjct: 517 QSTQLHSHQTCHTGEK 532

>ZN239_HUMAN (Q16600) Zinc finger protein 239 (Zinc finger protein MOK-2)|
           (HOK-2)
          Length = 458

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
 Frame = -1

Query: 470 LYSSSLHMDQPPYIYHSLSPG----PCLLQHVSSSCGERIQTCAACHIIDDSFVSCGPRP 303
           L   ++H D+ PY       G      LL H +   GE+   C            CG   
Sbjct: 251 LIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCD----------KCGKGF 300

Query: 302 KRSSSFHIHLTTHIGKQ 252
            +SS  HIH   H G++
Sbjct: 301 SQSSKLHIHQRVHTGEK 317

>XFIN_XENLA (P08045) Zinc finger protein Xfin|
          Length = 1350

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
 Frame = -1

Query: 476 TWLYSSSLHMDQPPYIYHSLSPG----PCLLQHVSSSCGERIQTCAACHIIDDSFVSCGP 309
           ++L     H  + PY+    + G      L++H  +  GER   CA CH     F+    
Sbjct: 340 SFLNHQQTHSREKPYLCSHCNKGFIQNSDLVKHFRTHTGERPYQCAECH---KGFI---- 392

Query: 308 RPKRSSSFHIHLTTHIGKQ 252
              + S    HL TH G++
Sbjct: 393 ---QKSDLVKHLRTHTGEK 408

>PAQRA_MOUSE (Q8R189) Monocyte to macrophage differentiation factor 2 (Progestin|
           and adipoQ receptor family member X)
          Length = 247

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 300 LGPWSTRNKGIVYYMASCTSLYPFATT*RYVL 395
           LGPW++  + +V+ MAS  ++Y F    RY L
Sbjct: 129 LGPWASHMRWLVWIMASIGTIYVFFFHERYKL 160

>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor|
          Length = 4007

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
 Frame = -1

Query: 425 HSLSPGPCLLQ------HVSSSCGERIQTCAACH-IIDDSFVSCGPRPKRSSSFHIHLT 270
           H L  G CL Q      H   SC E   TC  CH  ++   +SC P        HI LT
Sbjct: 736 HVLLDGQCLSQCPDGYFHQEGSCTECHPTCRQCHGPLESDCISCYP--------HISLT 786

>ZN267_HUMAN (Q14586) Zinc finger protein 267 (Zinc finger protein HZF2)|
          Length = 743

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
 Frame = -1

Query: 455 LHMDQPPY----IYHSLSPGPCLLQHVSSSCGERIQTCAACHIIDDSFVSCGPRPKRSSS 288
           +H  + PY       + +   CL QH ++  GE++  C  C     S+        RSS+
Sbjct: 429 IHTGEKPYKCKECGKAFNRSSCLTQHQTTHTGEKLYKCKVC---SKSYA-------RSSN 478

Query: 287 FHIHLTTH----------IGKQFSRHTSADWERPLQT 207
             +H   H           GK FSR +     R + T
Sbjct: 479 LIMHQRVHTGEKPYKCKECGKVFSRSSCLTQHRKIHT 515

>VPS39_MOUSE (Q8R5L3) Vam6/Vps39-like protein (Vps39 protein)|
          Length = 886

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +2

Query: 221 VPNLQKYALRIVSQCVSSSGCERNWSAWALVHTKQRNRLLY 343
           VP L+K  L+I         C   W  W LV TKQ + LLY
Sbjct: 8   VPILEKLPLQI--------DCLAAWEEWLLVGTKQGHLLLY 40

>VPS39_HUMAN (Q96JC1) Vam6/Vps39-like protein (hVam6p)|
          Length = 886

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +2

Query: 221 VPNLQKYALRIVSQCVSSSGCERNWSAWALVHTKQRNRLLY 343
           VP L+K  L+I         C   W  W LV TKQ + LLY
Sbjct: 8   VPILEKLPLQI--------DCLAAWEEWLLVGTKQGHLLLY 40

>TCF17_HUMAN (O60765) Zinc finger protein 354A (Transcription factor 17) (Zinc|
           finger protein eZNF)
          Length = 605

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = -1

Query: 455 LHMDQPPYIYHSLSPGPCLLQHVSSSCGERIQTCAACHIIDDSFV--SCGPRPKRSSSFH 282
           +H ++ P  Y+   PG       +SSC   +  C   H    S++   CG   K SSS  
Sbjct: 319 IHAEENPCKYN---PG-----RKASSCSTSLSGCQRIHSRKKSYLCNECGNTFKSSSSLR 370

Query: 281 IHLTTHIGKQ 252
            H   H G++
Sbjct: 371 YHQRIHTGEK 380


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,114,929
Number of Sequences: 219361
Number of extensions: 1610396
Number of successful extensions: 5081
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5042
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)