>ref|XM_661397.1| Cryptosporidium hominis TU502 zinc-finger protein zpr1 (Chro.20130)
           partial mRNA
          Length = 528

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 89  tggtcaatttgtccaggatgatca 112
           ||||||||||||||||||||||||
Sbjct: 405 tggtcaatttgtccaggatgatca 428

>ref|XM_626343.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_1170),
            partial mRNA
          Length = 1428

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 89   tggtcaatttgtccaggatgatca 112
            ||||||||||||||||||||||||
Sbjct: 1305 tggtcaatttgtccaggatgatca 1328

>gb|AC112909.4| Homo sapiens 3 BAC RP11-814O5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114411

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    gcaacacactttgctccatt 70
             ||||||||||||||||||||
Sbjct: 97879 gcaacacactttgctccatt 97898

>ref|NM_060614.2| Caenorhabditis elegans Y47H9C.8 (Y47H9C.8) mRNA, complete cds
          Length = 1231

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  cacactttgctccatttcct 74
           ||||||||||||||||||||
Sbjct: 782 cacactttgctccatttcct 801

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                               
Query: 21      catgttcctcctcctgaggactcatatagggcaacacactttgctcca 68
               ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 6610620 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 6610573

>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0425F05
          Length = 162858

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 21    catgttcctcctcctgaggactcatatagggcaacacactttgctcca 68
             ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 44746 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 44699

>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0690H04
          Length = 137319

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 21     catgttcctcctcctgaggactcatatagggcaacacactttgctcca 68
              ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 126996 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 126949

>dbj|AK073517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040I03, full
            insert sequence
          Length = 2636

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 21   catgttcctcctcctgaggactcatatagggcaacacactttgctcca 68
            ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 1488 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 1535

>dbj|AK066970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089B21, full
            insert sequence
          Length = 2977

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 21   catgttcctcctcctgaggactcatatagggcaacacactttgctcca 68
            ||||||||||| ||| | |||| ||| |||||||||| ||||| ||||
Sbjct: 1440 catgttcctccccctaaagacttatacagggcaacacgctttgatcca 1487

>gb|AC164875.14| Mus musculus chromosome 1, clone RP23-59P14, complete sequence
          Length = 250957

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 103    aggatgatcacatatattatcaac 126
              ||||||||||||| ||||||||||
Sbjct: 109544 aggatgatcacatttattatcaac 109567

>gb|U05229.1|AH006680S1 Homo sapiens neutral amino acid transporter (ASC) gene, exon 1
          Length = 1280

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 24 gttcctcctcctgaggact 42
          |||||||||||||||||||
Sbjct: 70 gttcctcctcctgaggact 52

>gb|AC147621.3| Mus musculus BAC clone RP24-315M14 from chromosome Y, complete sequence
          Length = 166529

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 106   atgatcacatatattatca 124
             |||||||||||||||||||
Sbjct: 83991 atgatcacatatattatca 83973

>gb|AC140203.2| Mus musculus BAC clone RP24-334J15 from chromosome Y, complete sequence
          Length = 159604

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 106   atgatcacatatattatca 124
             |||||||||||||||||||
Sbjct: 38700 atgatcacatatattatca 38682

>ref|XM_749605.1| Aspergillus fumigatus Af293 fatty acid hydroxylase (Afu3g09220)
            partial mRNA
          Length = 3363

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 96   tttgtccaggatgatcaca 114
            |||||||||||||||||||
Sbjct: 1113 tttgtccaggatgatcaca 1095

>ref|XM_647691.1| Entamoeba histolytica HM-1:IMSS phosphatidylinositol-glycan
           biosynthesis class O protein (105.t00028) partial mRNA
          Length = 2601

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 109 atcacatatattatcaaca 127
           |||||||||||||||||||
Sbjct: 651 atcacatatattatcaaca 633

>ref|XM_651018.1| Entamoeba histolytica HM-1:IMSS phosphatidylinositol-glycan
           biosynthesis class O protein (17.t00022) partial mRNA
          Length = 2613

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 109 atcacatatattatcaaca 127
           |||||||||||||||||||
Sbjct: 651 atcacatatattatcaaca 633

>gb|AC137819.19| Medicago truncatula clone mth2-21i24, complete sequence
          Length = 116989

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    atgttcctcctcctgagga 40
             |||||||||||||||||||
Sbjct: 59058 atgttcctcctcctgagga 59076

>emb|AL096769.7|HS1080B10 Human DNA sequence from clone RP5-1080B10 on chromosome 20 Contains
             STSs and GSSs, complete sequence
          Length = 81798

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 56    acactttgctccatttcct 74
             |||||||||||||||||||
Sbjct: 62227 acactttgctccatttcct 62245

>gb|AY036011.1| Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete
            cds
          Length = 2253

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 92   tcaatttgtccaggatgat 110
            |||||||||||||||||||
Sbjct: 1006 tcaatttgtccaggatgat 988

>gb|AF383151.1|AF383151 Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) gene, partial
            cds
          Length = 2677

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 92   tcaatttgtccaggatgat 110
            |||||||||||||||||||
Sbjct: 1545 tcaatttgtccaggatgat 1527

>gb|AC007386.3| Homo sapiens BAC clone RP11-359K10 from 2, complete sequence
          Length = 176742

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    gttcctcctcctgaggact 42
             |||||||||||||||||||
Sbjct: 89393 gttcctcctcctgaggact 89411

>dbj|D14995.2|ASG241KP Apple stem grooving virus genome, complete sequence
          Length = 6495

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 96   tttgtccaggatgatcaca 114
            |||||||||||||||||||
Sbjct: 1325 tttgtccaggatgatcaca 1307

>gb|DQ353767.1| Ictalurus punctatus isolate C23IIA05 signal sequence receptor delta
           mRNA, partial cds
          Length = 508

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 43  catatagggcaacacactttgctccatttcc 73
           |||| |||||||||| || ||||||||||||
Sbjct: 229 catagagggcaacactctgtgctccatttcc 199

>ref|XM_346038.2| PREDICTED: Rattus norvegicus similar to hypothetical protein
           MGC41816 (LOC367251), mRNA
          Length = 732

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 49  gggcaacacactttgctccattt 71
           ||||| |||||||||||||||||
Sbjct: 457 gggcatcacactttgctccattt 435

>emb|CR376776.19| Zebrafish DNA sequence from clone CH211-13I23, complete sequence
          Length = 179675

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 78    gagtcccgacctggtcaatttgt 100
             |||||||||| ||||||||||||
Sbjct: 76511 gagtcccgacttggtcaatttgt 76489

>gb|AC124696.5| Mus musculus BAC clone RP24-173I13 from chromosome 16, complete
             sequence
          Length = 187655

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   atcacatatattatcaaca 127
             |||||||||||||||||||
Sbjct: 73930 atcacatatattatcaaca 73948

>dbj|D85850.1| Daucus carota gDcPAL1 gene for phenylalanine ammonia-lyase, complete
            cds
          Length = 5465

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 92   tcaatttgtccaggatgat 110
            |||||||||||||||||||
Sbjct: 3882 tcaatttgtccaggatgat 3864


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,219,696
Number of Sequences: 3902068
Number of extensions: 1219696
Number of successful extensions: 71533
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71489
Number of HSP's gapped (non-prelim): 44
length of query: 161
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 139
effective length of database: 17,147,199,772
effective search space: 2383460768308
effective search space used: 2383460768308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)