No.
Definition
Score (bits)
E Value
1 ref|XM_450926.1| Oryza sativa (japonica cultivar-group), mRNA
696
0.0
2 dbj|AB107218.1| Oryza sativa (japonica cultivar-group) mRNA for ...
696
0.0
3 dbj|AK068061.1| Oryza sativa (japonica cultivar-group) cDNA clon...
696
0.0
4 gb|AY224509.1| Oryza sativa (japonica cultivar-group) isolate 31...
620
e-174
5 ref|XM_482970.1| Oryza sativa (japonica cultivar-group), mRNA
385
e-103
6 dbj|AK107494.1| Oryza sativa (japonica cultivar-group) cDNA clon...
385
e-103
7 gb|AY109946.1| Zea mays CL9211_1 mRNA sequence
371
2e-99
8 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
198
2e-47
9 dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic D...
198
2e-47
10 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
182
9e-43
11 dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic D...
182
9e-43
12 gb|AY690424.1| Lycopersicon esculentum cultivar Rutgers glucose-...
151
3e-33
13 gb|BT013471.1| Lycopersicon esculentum clone 132132R, mRNA sequence
151
3e-33
14 emb|AJ000265.1|SOJ00265 Spinacia oleracea mRNA (nuclear-encoded)...
129
1e-26
15 ref|NM_118595.3| Arabidopsis thaliana PGI1 (CHLOROPLASTIC PHOSPH...
88
4e-14
16 gb|BT000953.1| Arabidopsis thaliana clone C105270 putative gluco...
88
4e-14
17 gb|AY080758.1| Arabidopsis thaliana At4g24620 mRNA sequence
88
4e-14
18 emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, ...
54
6e-04
19 emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, B...
54
6e-04
20 gb|AF120494.1|AF120494 Arabidopsis thaliana phosphoglucose isome...
54
6e-04
21 gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1...
44
0.55
22 gb|AC126549.4| Mus musculus BAC clone RP24-326I12 from chromosom...
42
2.2
23 gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
42
2.2
24 gb|AC124180.5| Mus musculus BAC clone RP23-200I16 from 16, compl...
42
2.2
25 gb|AC100208.16| Mus musculus chromosome 7, clone RP23-59J14, com...
40
8.6
26 emb|AL713956.13| Mouse DNA sequence from clone RP23-412C18 on ch...
40
8.6
27 emb|BX546452.9| Zebrafish DNA sequence from clone DKEYP-8B11 in ...
40
8.6
28 gb|AF434165.1| Dugbe virus isolate KT 281/75 segment S, complete...
40
8.6
29 gb|AC113610.4| Homo sapiens BAC clone RP11-373H2 from 2, complet...
40
8.6
30 gb|AC010740.7| Homo sapiens BAC clone RP11-493I5 from 2, complet...
40
8.6
31 gb|AC105051.1| Homo sapiens BAC clone RP11-292A3 from 2, complet...
40
8.6
32 gb|AC091248.6| Mus musculus Strain C57BL6/J chromosome 1 BAC, RP...
40
8.6
33 emb|BX248104.5| Zebrafish DNA sequence from clone DKEY-77P13 in ...
40
8.6
34 emb|BX004889.8| Zebrafish DNA sequence from clone DKEY-65P15 in ...
40
8.6
>dbj|AP008215.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 198 bits (100), Expect = 2e-47
Identities = 109/112 (97%)
Strand = Plus / Minus
Query: 455 aggatatggttgtacttccttacaaggatagtctgctacttttgagtagatatttacaac 514
||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||
Sbjct: 17596259 aggatatggttgtacttccgtacaaggatagtttgctacttttgagtagatatttgcaac 17596200
Query: 515 agcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggt 566
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17596199 agcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggt 17596148
Score = 190 bits (96), Expect = 4e-45
Identities = 135/148 (91%)
Strand = Plus / Minus
Query: 175 cagggagttgcaatcactcaagaaaattctctattagataacactgccagaatagaggga 234
|||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 17596797 cagggagttgcagttactcaagaaaattctctgttagacaacactgccagaatagaggga 17596738
Query: 235 tggttagatcgatttcctatgtttgactgggttggtggtagaacatcagaattgtcagcg 294
||||||| | ||||||| |||||||||||||||||||| |||||||||||| |||||||
Sbjct: 17596737 tggttagctagatttcccatgtttgactgggttggtggaagaacatcagaaatgtcagct 17596678
Query: 295 gtggggttacttccagctgcattacagg 322
|| || || |||||||||||||||||||
Sbjct: 17596677 gtcggattgcttccagctgcattacagg 17596650
Score = 85.7 bits (43), Expect = 2e-13
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 319 cagggtattgatgtcaaggaaatgctagttggtgcagcactaatggatgaggagaccagg 378
|||||||| ||| |||| |||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 17596573 cagggtatcgatatcaaagaaatgttagttggcgcagcactaatggatgaggaaaccagg 17596514
Query: 379 aacactgtggt 389
|| ||||||||
Sbjct: 17596513 aatactgtggt 17596503
Score = 81.8 bits (41), Expect = 3e-12
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 90 agagtggtggtacacctgaaacccggnaatggtctactagaagtacaaaaagccttcagn 149
||||||| || ||||||||||||||| |||||||| || ||||| |||||||||||| |
Sbjct: 17597457 agagtggaggcacacctgaaacccgg-aatggtctgcttgaagtgcaaaaagccttccg- 17597400
Query: 150 agatgctggactggatttctcaaaacagg 178
||||||||| ||||||||||| |||||||
Sbjct: 17597399 agatgctgggctggatttctcgaaacagg 17597371
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 564 ggttaatcaagggctaactgtatatggtaacaaaggaagcacagaccagcatgc 617
|||||||||||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 17595721 ggttaatcaaggtctaactgtgtatggcaacaaaggaagcaccgatcagcatgc 17595668
Score = 61.9 bits (31), Expect = 2e-06
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 387 ggttaaggaaaatccagcagcattacttgcgttatcttggtattgggctactgaaggaat 446
||||||||||||||||||||| |||||||| || | ||||||||||| | ||||||||
Sbjct: 17596414 ggttaaggaaaatccagcagccttacttgctttgtgctggtattgggcatcggaaggaat 17596355
Query: 447 agg 449
|||
Sbjct: 17596354 agg 17596352
Score = 44.1 bits (22), Expect = 0.55
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 31 catcaaattgctcaactaggggnaggaacttaaatctactcttgtaattgtaatctctaa 90
|||||||||||||||||||| | || ||| |||||||||||||||||| || |||||
Sbjct: 17597598 catcaaattgctcaactaggacca-gagcttgcatctactcttgtaattgttatttctaa 17597540
Query: 91 g 91
|
Sbjct: 17597539 g 17597539
>dbj|AP005676.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1005_D12
Length = 150588
Score = 198 bits (100), Expect = 2e-47
Identities = 109/112 (97%)
Strand = Plus / Minus
Query: 455 aggatatggttgtacttccttacaaggatagtctgctacttttgagtagatatttacaac 514
||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||
Sbjct: 44981 aggatatggttgtacttccgtacaaggatagtttgctacttttgagtagatatttgcaac 44922
Query: 515 agcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggt 566
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44921 agcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggt 44870
Score = 190 bits (96), Expect = 4e-45
Identities = 135/148 (91%)
Strand = Plus / Minus
Query: 175 cagggagttgcaatcactcaagaaaattctctattagataacactgccagaatagaggga 234
|||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 45519 cagggagttgcagttactcaagaaaattctctgttagacaacactgccagaatagaggga 45460
Query: 235 tggttagatcgatttcctatgtttgactgggttggtggtagaacatcagaattgtcagcg 294
||||||| | ||||||| |||||||||||||||||||| |||||||||||| |||||||
Sbjct: 45459 tggttagctagatttcccatgtttgactgggttggtggaagaacatcagaaatgtcagct 45400
Query: 295 gtggggttacttccagctgcattacagg 322
|| || || |||||||||||||||||||
Sbjct: 45399 gtcggattgcttccagctgcattacagg 45372
Score = 85.7 bits (43), Expect = 2e-13
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 319 cagggtattgatgtcaaggaaatgctagttggtgcagcactaatggatgaggagaccagg 378
|||||||| ||| |||| |||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 45295 cagggtatcgatatcaaagaaatgttagttggcgcagcactaatggatgaggaaaccagg 45236
Query: 379 aacactgtggt 389
|| ||||||||
Sbjct: 45235 aatactgtggt 45225
Score = 81.8 bits (41), Expect = 3e-12
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 90 agagtggtggtacacctgaaacccggnaatggtctactagaagtacaaaaagccttcagn 149
||||||| || ||||||||||||||| |||||||| || ||||| |||||||||||| |
Sbjct: 46179 agagtggaggcacacctgaaacccgg-aatggtctgcttgaagtgcaaaaagccttccg- 46122
Query: 150 agatgctggactggatttctcaaaacagg 178
||||||||| ||||||||||| |||||||
Sbjct: 46121 agatgctgggctggatttctcgaaacagg 46093
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 564 ggttaatcaagggctaactgtatatggtaacaaaggaagcacagaccagcatgc 617
|||||||||||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 44443 ggttaatcaaggtctaactgtgtatggcaacaaaggaagcaccgatcagcatgc 44390
Score = 61.9 bits (31), Expect = 2e-06
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 387 ggttaaggaaaatccagcagcattacttgcgttatcttggtattgggctactgaaggaat 446
||||||||||||||||||||| |||||||| || | ||||||||||| | ||||||||
Sbjct: 45136 ggttaaggaaaatccagcagccttacttgctttgtgctggtattgggcatcggaaggaat 45077
Query: 447 agg 449
|||
Sbjct: 45076 agg 45074
Score = 44.1 bits (22), Expect = 0.55
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 31 catcaaattgctcaactaggggnaggaacttaaatctactcttgtaattgtaatctctaa 90
|||||||||||||||||||| | || ||| |||||||||||||||||| || |||||
Sbjct: 46320 catcaaattgctcaactaggacca-gagcttgcatctactcttgtaattgttatttctaa 46262
Query: 91 g 91
|
Sbjct: 46261 g 46261
>dbj|AP008214.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 182 bits (92), Expect = 9e-43
Identities = 134/148 (90%)
Strand = Plus / Minus
Query: 175 cagggagttgcaatcactcaagaaaattctctattagataacactgccagaatagaggga 234
||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 23618803 cagggtgttgcaattactcaagagaattctttattagataacactgccagaatagagggg 23618744
Query: 235 tggttagatcgatttcctatgtttgactgggttggtggtagaacatcagaattgtcagcg 294
||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 23618743 tggttagctagatttcccatgtttgactgggttggtggtagaacatcagaaatgtcagct 23618684
Query: 295 gtggggttacttccagctgcattacagg 322
|| || ||||| ||||| ||||||||||
Sbjct: 23618683 gttggtttactgccagcagcattacagg 23618656
Score = 133 bits (67), Expect = 8e-28
Identities = 100/111 (90%)
Strand = Plus / Minus
Query: 456 ggatatggttgtacttccttacaaggatagtctgctacttttgagtagatatttacaaca 515
|||||||| |||| | || ||||||||||| ||||| |||||||||||||| || |||||
Sbjct: 23618145 ggatatggctgtattgccatacaaggatagcctgcttcttttgagtagatacttgcaaca 23618086
Query: 516 gcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggt 566
|||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 23618085 acttgtcatggaatctcttggaaaagaatttgaccttgatggaaatcgggt 23618035
Score = 83.8 bits (42), Expect = 6e-13
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 564 ggttaatcaagggctaactgtatatggtaacaaaggaagcacagaccagcatgc 617
||||||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 23617873 ggttaatcagggactaactgtttatggtaacaaaggaagcacagaccagcatgc 23617820
Score = 75.8 bits (38), Expect = 2e-10
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 320 agggtattgatgtcaaggaaatgctagttggtgcagcactaatggatgaggagaccagga 379
|||||||||| |||||||||||||||||||||| |||| |||||||||||| || ||||
Sbjct: 23618555 agggtattgacatcaaggaaatgctagttggtgctgcacaaatggatgaggaaactagga 23618496
Query: 380 acactg 385
| ||||
Sbjct: 23618495 atactg 23618490
Score = 67.9 bits (34), Expect = 4e-08
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 90 agagtggtggtacacctgaaacccggnaatggtctactagaagtacaaaaagccttcagn 149
||||||| || ||||||||||| || ||||||||| ||||||||||||| |||||| |
Sbjct: 23619416 agagtggaggcacacctgaaacacg-aaatggtctattagaagtacaaaaggccttccg- 23619359
Query: 150 agatgctggactggatttctcaaaacagg 178
|||||||||||| || ||||| |||||||
Sbjct: 23619358 agatgctggactagaattctcgaaacagg 23619330
Score = 58.0 bits (29), Expect = 4e-05
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 389 ttaaggaaaatccagcagcattacttgcgttatcttggtattgggctactgaaggaatag 448
||||||||||||||||||| || ||||| || | |||||||||||| | || |||||||
Sbjct: 23618358 ttaaggaaaatccagcagccttgcttgcattgtgttggtattgggcatcggatggaatag 23618299
Query: 449 gcagcaagg 457
|||| ||||
Sbjct: 23618298 gcagtaagg 23618290
>dbj|AP004643.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1113_A10
Length = 160089
Score = 182 bits (92), Expect = 9e-43
Identities = 134/148 (90%)
Strand = Plus / Minus
Query: 175 cagggagttgcaatcactcaagaaaattctctattagataacactgccagaatagaggga 234
||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 26399 cagggtgttgcaattactcaagagaattctttattagataacactgccagaatagagggg 26340
Query: 235 tggttagatcgatttcctatgtttgactgggttggtggtagaacatcagaattgtcagcg 294
||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 26339 tggttagctagatttcccatgtttgactgggttggtggtagaacatcagaaatgtcagct 26280
Query: 295 gtggggttacttccagctgcattacagg 322
|| || ||||| ||||| ||||||||||
Sbjct: 26279 gttggtttactgccagcagcattacagg 26252
Score = 133 bits (67), Expect = 8e-28
Identities = 100/111 (90%)
Strand = Plus / Minus
Query: 456 ggatatggttgtacttccttacaaggatagtctgctacttttgagtagatatttacaaca 515
|||||||| |||| | || ||||||||||| ||||| |||||||||||||| || |||||
Sbjct: 25741 ggatatggctgtattgccatacaaggatagcctgcttcttttgagtagatacttgcaaca 25682
Query: 516 gcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggt 566
|||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 25681 acttgtcatggaatctcttggaaaagaatttgaccttgatggaaatcgggt 25631
Score = 83.8 bits (42), Expect = 6e-13
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 564 ggttaatcaagggctaactgtatatggtaacaaaggaagcacagaccagcatgc 617
||||||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25469 ggttaatcagggactaactgtttatggtaacaaaggaagcacagaccagcatgc 25416
Score = 75.8 bits (38), Expect = 2e-10
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 320 agggtattgatgtcaaggaaatgctagttggtgcagcactaatggatgaggagaccagga 379
|||||||||| |||||||||||||||||||||| |||| |||||||||||| || ||||
Sbjct: 26151 agggtattgacatcaaggaaatgctagttggtgctgcacaaatggatgaggaaactagga 26092
Query: 380 acactg 385
| ||||
Sbjct: 26091 atactg 26086
Score = 67.9 bits (34), Expect = 4e-08
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 90 agagtggtggtacacctgaaacccggnaatggtctactagaagtacaaaaagccttcagn 149
||||||| || ||||||||||| || ||||||||| ||||||||||||| |||||| |
Sbjct: 27012 agagtggaggcacacctgaaacacg-aaatggtctattagaagtacaaaaggccttccg- 26955
Query: 150 agatgctggactggatttctcaaaacagg 178
|||||||||||| || ||||| |||||||
Sbjct: 26954 agatgctggactagaattctcgaaacagg 26926
Score = 58.0 bits (29), Expect = 4e-05
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 389 ttaaggaaaatccagcagcattacttgcgttatcttggtattgggctactgaaggaatag 448
||||||||||||||||||| || ||||| || | |||||||||||| | || |||||||
Sbjct: 25954 ttaaggaaaatccagcagccttgcttgcattgtgttggtattgggcatcggatggaatag 25895
Query: 449 gcagcaagg 457
|||| ||||
Sbjct: 25894 gcagtaagg 25886
>ref|NM_118595.3 | Arabidopsis thaliana PGI1 (CHLOROPLASTIC PHOSPHOGLUCOSE ISOMERASE)
AT4G24620 (PGI1) mRNA, complete cds
Length = 2272
Score = 87.7 bits (44), Expect = 4e-14
Identities = 146/180 (81%)
Strand = Plus / Plus
Query: 453 caaggatatggttgtacttccttacaaggatagtctgctacttttgagtagatatttaca 512
||||||||||||||| ||||||||||||||||| | | || || ||| | ||| | ||
Sbjct: 1316 caaggatatggttgtccttccttacaaggatagcttattgctatttagtcggtatctgca 1375
Query: 513 acagcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggttaatca 572
||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 1376 gcagctggtcatggaatcactaggaaaggagtttgatcttgacggtaacactgttaatca 1435
Query: 573 agggctaactgtatatggtaacaaaggaagcacagaccagcatgcttacattcaacagct 632
|||| ||||||| ||||| || || ||||||||||| ||||| || ||||||||||||||
Sbjct: 1436 agggttaactgtgtatggaaataagggaagcacagatcagcacgcctacattcaacagct 1495
Score = 61.9 bits (31), Expect = 2e-06
Identities = 229/293 (78%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 78 ttgtaatctctaagagtggtggtacacctgaaacccggnaatggtctactagaagtacaa 137
|||| ||||| |||||||| ||||| |||||||| | ||||| ||||| ||||| ||
Sbjct: 943 ttgtcatctcaaagagtggaggtactcctgaaactag-aaatggactactggaagtgcag 1001
Query: 138 aaagccttcagnagatgctggactggatttctcaaaacagggagttgcaatcactcaaga 197
||||| ||| | || ||||| ||| ||||| |||||||||| |||||||| || |||||
Sbjct: 1002 aaagcattccgt-gaagctggtctgaatttcgcaaaacagggtgttgcaataacccaaga 1060
Query: 198 aaattctctattagataacactgccagaatagagggatggttagatcgatttcctatgtt 257
|| || || | ||||| || || ||||| || || ||| ||| | ||||||||||||
Sbjct: 1061 gaactcattactggataatacggcaagaattgaaggttggctagctagatttcctatgta 1120
Query: 258 tgactgggttggtggtagaacatcagaattgtcagcggtggggttacttccagctgcatt 317
|||||||| ||||| ||||||||| | |||| || || || | |||||||| ||| |
Sbjct: 1121 cgactgggtgggtggaagaacatcaataatgtctgcagttggtctgcttccagcagcact 1180
Query: 318 acagggtattgatgtcaaggaaatgctagttggtgcagcactaatggatgagg 370
|||||| ||| |||| | ||| ||||| |||||| || ||||||||||||
Sbjct: 1181 acaggggattaatgttagggagatgcttactggtgctgctttaatggatgagg 1233
Score = 58.0 bits (29), Expect = 4e-05
Identities = 223/282 (79%), Gaps = 5/282 (1%)
Strand = Plus / Plus
Query: 1 tgacaacaccgnaccctgctggtaattgatcatcaaattgctcaactaggggnaggaact 60
||||||||||| |||||||||| |||||||||||| ||||| ||||| ||| | || ||
Sbjct: 869 tgacaacaccg-accctgctgg-aattgatcatcagattgcacaacttgggcca-gagct 925
Query: 61 taaatctactcttgtaattgtaatctctaagagtggtggtacacctgaaacccggnaatg 120
|| ||| | ||| |||| ||||| |||||||| ||||| ||||||| | | ||||
Sbjct: 926 ggcctcgactttagtagttgtcatctcaaagagtggaggtactcctgaaa-ctagaaatg 984
Query: 121 gtctactagaagtacaaaaagccttcagnagatgctggactggatttctcaaaacaggga 180
| ||||| ||||| || ||||| ||| | || ||||| ||| ||||| ||||||||||
Sbjct: 985 gactactggaagtgcagaaagcattccgt-gaagctggtctgaatttcgcaaaacagggt 1043
Query: 181 gttgcaatcactcaagaaaattctctattagataacactgccagaatagagggatggtta 240
|||||||| || ||||| || || || | ||||| || || ||||| || || ||| ||
Sbjct: 1044 gttgcaataacccaagagaactcattactggataatacggcaagaattgaaggttggcta 1103
Query: 241 gatcgatttcctatgtttgactgggttggtggtagaacatca 282
| | |||||||||||| |||||||| ||||| |||||||||
Sbjct: 1104 gctagatttcctatgtacgactgggtgggtggaagaacatca 1145
>gb|BT000953.1 | Arabidopsis thaliana clone C105270 putative glucose-6-phosphate
isomerase (At4g24620) mRNA, complete cds
Length = 1873
Score = 87.7 bits (44), Expect = 4e-14
Identities = 146/180 (81%)
Strand = Plus / Plus
Query: 453 caaggatatggttgtacttccttacaaggatagtctgctacttttgagtagatatttaca 512
||||||||||||||| ||||||||||||||||| | | || || ||| | ||| | ||
Sbjct: 1101 caaggatatggttgtccttccttacaaggatagcttattgctatttagtcggtatctgca 1160
Query: 513 acagcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggttaatca 572
||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 1161 gcagctggtcatggaatcactaggaaaggagtttgatcttgacggtaacactgttaatca 1220
Query: 573 agggctaactgtatatggtaacaaaggaagcacagaccagcatgcttacattcaacagct 632
|||| ||||||| ||||| || || ||||||||||| ||||| || ||||||||||||||
Sbjct: 1221 agggttaactgtgtatggaaataagggaagcacagatcagcacgcctacattcaacagct 1280
Score = 61.9 bits (31), Expect = 2e-06
Identities = 229/293 (78%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 78 ttgtaatctctaagagtggtggtacacctgaaacccggnaatggtctactagaagtacaa 137
|||| ||||| |||||||| ||||| |||||||| | ||||| ||||| ||||| ||
Sbjct: 728 ttgtcatctcaaagagtggaggtactcctgaaactag-aaatggactactggaagtgcag 786
Query: 138 aaagccttcagnagatgctggactggatttctcaaaacagggagttgcaatcactcaaga 197
||||| ||| | || ||||| ||| ||||| |||||||||| |||||||| || |||||
Sbjct: 787 aaagcattccgt-gaagctggtctgaatttcgcaaaacagggtgttgcaataacccaaga 845
Query: 198 aaattctctattagataacactgccagaatagagggatggttagatcgatttcctatgtt 257
|| || || | ||||| || || ||||| || || ||| ||| | ||||||||||||
Sbjct: 846 gaactcattactggataatacggcaagaattgaaggttggctagctagatttcctatgta 905
Query: 258 tgactgggttggtggtagaacatcagaattgtcagcggtggggttacttccagctgcatt 317
|||||||| ||||| ||||||||| | |||| || || || | |||||||| ||| |
Sbjct: 906 cgactgggtgggtggaagaacatcaataatgtctgcagttggtctgcttccagcagcact 965
Query: 318 acagggtattgatgtcaaggaaatgctagttggtgcagcactaatggatgagg 370
|||||| ||| |||| | ||| ||||| |||||| || ||||||||||||
Sbjct: 966 acaggggattaatgttagggagatgcttactggtgctgctttaatggatgagg 1018
Score = 58.0 bits (29), Expect = 4e-05
Identities = 223/282 (79%), Gaps = 5/282 (1%)
Strand = Plus / Plus
Query: 1 tgacaacaccgnaccctgctggtaattgatcatcaaattgctcaactaggggnaggaact 60
||||||||||| |||||||||| |||||||||||| ||||| ||||| ||| | || ||
Sbjct: 654 tgacaacaccg-accctgctgg-aattgatcatcagattgcacaacttgggcca-gagct 710
Query: 61 taaatctactcttgtaattgtaatctctaagagtggtggtacacctgaaacccggnaatg 120
|| ||| | ||| |||| ||||| |||||||| ||||| ||||||| | | ||||
Sbjct: 711 ggcctcgactttagtagttgtcatctcaaagagtggaggtactcctgaaa-ctagaaatg 769
Query: 121 gtctactagaagtacaaaaagccttcagnagatgctggactggatttctcaaaacaggga 180
| ||||| ||||| || ||||| ||| | || ||||| ||| ||||| ||||||||||
Sbjct: 770 gactactggaagtgcagaaagcattccgt-gaagctggtctgaatttcgcaaaacagggt 828
Query: 181 gttgcaatcactcaagaaaattctctattagataacactgccagaatagagggatggtta 240
|||||||| || ||||| || || || | ||||| || || ||||| || || ||| ||
Sbjct: 829 gttgcaataacccaagagaactcattactggataatacggcaagaattgaaggttggcta 888
Query: 241 gatcgatttcctatgtttgactgggttggtggtagaacatca 282
| | |||||||||||| |||||||| ||||| |||||||||
Sbjct: 889 gctagatttcctatgtacgactgggtgggtggaagaacatca 930
>emb|AL161561.2 |ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61
Length = 198402
Score = 54.0 bits (27), Expect = 6e-04
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 455 aggatatggttgtacttccttacaaggatag 485
||||||||||||| |||||||||||||||||
Sbjct: 178123 aggatatggttgtccttccttacaaggatag 178093
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 564 ggttaatcaagggctaactgtatatggtaacaaaggaagcacagaccagca 614
||||||||||||| ||||||| ||||| || || ||||||||||| |||||
Sbjct: 177753 ggttaatcaagggttaactgtgtatggaaataagggaagcacagatcagca 177703
Score = 46.1 bits (23), Expect = 0.14
Identities = 43/47 (91%), Gaps = 2/47 (4%)
Strand = Plus / Minus
Query: 1 tgacaacaccgnaccctgctggtaattgatcatcaaattgctcaact 47
||||||||||| |||||||||| |||||||||||| ||||| |||||
Sbjct: 179258 tgacaacaccg-accctgctgg-aattgatcatcagattgcacaact 179214
Score = 44.1 bits (22), Expect = 0.55
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 245 gatttcctatgtttgactgggttggtggtagaacatca 282
|||||||||||| |||||||| ||||| |||||||||
Sbjct: 178653 gatttcctatgtacgactgggtgggtggaagaacatca 178616
>emb|AL035356.1 |ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII
project)
Length = 125803
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 564 ggttaatcaagggctaactgtatatggtaacaaaggaagcacagaccagca 614
||||||||||||| ||||||| ||||| || || ||||||||||| |||||
Sbjct: 71157 ggttaatcaagggttaactgtgtatggaaataagggaagcacagatcagca 71207
Score = 54.0 bits (27), Expect = 6e-04
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 455 aggatatggttgtacttccttacaaggatag 485
||||||||||||| |||||||||||||||||
Sbjct: 70787 aggatatggttgtccttccttacaaggatag 70817
Score = 46.1 bits (23), Expect = 0.14
Identities = 43/47 (91%), Gaps = 2/47 (4%)
Strand = Plus / Plus
Query: 1 tgacaacaccgnaccctgctggtaattgatcatcaaattgctcaact 47
||||||||||| |||||||||| |||||||||||| ||||| |||||
Sbjct: 69652 tgacaacaccg-accctgctgg-aattgatcatcagattgcacaact 69696
Score = 44.1 bits (22), Expect = 0.55
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 245 gatttcctatgtttgactgggttggtggtagaacatca 282
|||||||||||| |||||||| ||||| |||||||||
Sbjct: 70257 gatttcctatgtacgactgggtgggtggaagaacatca 70294
>gb|AF120494.1 |AF120494 Arabidopsis thaliana phosphoglucose isomerase precursor (PGI) gene,
complete cds; nuclear gene for chloroplast product
Length = 4176
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 564 ggttaatcaagggctaactgtatatggtaacaaaggaagcacagaccagca 614
||||||||||||| ||||||| ||||| || || ||||||||||| |||||
Sbjct: 2890 ggttaatcaagggttaactgtgtatggaaataagggaagcacagatcagca 2940
Score = 54.0 bits (27), Expect = 6e-04
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 455 aggatatggttgtacttccttacaaggatag 485
||||||||||||| |||||||||||||||||
Sbjct: 2520 aggatatggttgtccttccttacaaggatag 2550
Score = 46.1 bits (23), Expect = 0.14
Identities = 43/47 (91%), Gaps = 2/47 (4%)
Strand = Plus / Plus
Query: 1 tgacaacaccgnaccctgctggtaattgatcatcaaattgctcaact 47
||||||||||| |||||||||| |||||||||||| ||||| |||||
Sbjct: 1395 tgacaacaccg-accctgctgg-aattgatcatcagattgcacaact 1439
Score = 44.1 bits (22), Expect = 0.55
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 245 gatttcctatgtttgactgggttggtggtagaacatca 282
|||||||||||| |||||||| ||||| |||||||||
Sbjct: 1999 gatttcctatgtacgactgggtgggtggaagaacatca 2036
>emb|BX004889.8 | Zebrafish DNA sequence from clone DKEY-65P15 in linkage group 25,
complete sequence
Length = 253422
Score = 40.1 bits (20), Expect = 8.6
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Plus
Query: 489 gctacttttgagtagatatttacaacag 516
|||||||||||||| |||||||||||||
Sbjct: 63529 gctacttttgagta-atatttacaacag 63555
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,302,653
Number of Sequences: 3902068
Number of extensions: 5302653
Number of successful extensions: 108497
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 108274
Number of HSP's gapped (non-prelim): 205
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)