Clone Information

BLAST Search Result

Clone Name	bags8i06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ASPG2_ARATH (Q8GXG1) Probable L-asparaginase 2 precursor (EC 3.5...	80	2e-17
2	ASPG_LUPLU (Q9ZSD6) L-asparaginase precursor (EC 3.5.1.1) (L-asp...	61	6e-10
3	ASPG_LUPAL (P50288) L-asparaginase precursor (EC 3.5.1.1) (L-asp...	61	6e-10
4	ASPG_LUPAR (P30362) L-asparaginase precursor (EC 3.5.1.1) (L-asp...	59	3e-09
5	ASPG_LUPAN (P30364) L-asparaginase precursor (EC 3.5.1.1) (L-asp...	57	9e-09
6	ASPG1_ARATH (P50287) L-asparaginase 1 precursor (EC 3.5.1.1) (L-...	57	2e-08
7	FTSK_YERPE (Q8ZGC7) DNA translocase ftsK	35	0.050
8	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	35	0.050
9	IF2_PROMM (Q7V5M4) Translation initiation factor IF-2	35	0.050
10	RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif p...	34	0.085
11	ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phyt...	33	0.19
12	MK07_HUMAN (Q13164) Mitogen-activated protein kinase 7 (EC 2.7.1...	33	0.19
13	EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)	33	0.25
14	PODXL_RABIT (Q28645) Podocalyxin-like protein 1 precursor	32	0.32
15	IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2	32	0.32
16	RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif pro...	32	0.32
17	WHRN_HUMAN (Q9P202) Whirlin (Autosomal recessive deafness type 3...	32	0.42
18	Y598_TREPA (O83607) Hypothetical protein TP0598	32	0.42
19	SPHK2_MOUSE (Q9JIA7) Sphingosine kinase 2 (EC 2.7.1.-) (SK 2) (S...	32	0.55
20	MILK2_HUMAN (Q8IY33) MICAL-like protein 2	32	0.55
21	CRSP2_HUMAN (O60244) CRSP complex subunit 2 (Cofactor required f...	31	0.72
22	SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)	31	0.72
23	SIMA_DROME (Q24167) Protein similar	31	0.94
24	ARI1A_HUMAN (O14497) AT-rich interactive domain-containing prote...	31	0.94
25	BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain ...	30	1.2
26	INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)	30	1.2
27	EGR1_POEGU (O73693) Early growth response protein 1 (EGR-1) (Zin...	30	1.6
28	VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Pro...	30	1.6
29	LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alterna...	30	2.1
30	HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engra...	30	2.1
31	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	30	2.1
32	YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2	30	2.1
33	TOXE_COCCA (O74205) Transcription factor TOXE	29	2.7
34	YETS2_MOUSE (Q3TUF7) YEATS domain-containing protein 2	29	2.7
35	NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neur...	29	2.7
36	MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)	29	2.7
37	RBL2_MOUSE (Q64700) Retinoblastoma-like protein 2 (130 kDa retin...	29	2.7
38	IGA4_HAEIN (P45386) Immunoglobulin A1 protease precursor (EC 3.4...	29	2.7
39	ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 prot...	29	3.6
40	RD23D_ARATH (Q84L30) Putative DNA repair protein RAD23-4 (RAD23-...	29	3.6
41	RD23B_MOUSE (P54728) UV excision repair protein RAD23 homolog B ...	29	3.6
42	VID21_ASPFU (Q4WP03) Chromatin modification-related protein vid21	29	3.6
43	OAF_DROME (Q9NLA6) Out at first protein [Contains: Out at first ...	29	3.6
44	LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alterna...	29	3.6
45	WSC2_YEAST (P53832) Cell wall integrity and stress response comp...	29	3.6
46	MB11_ARATH (Q9SAV1) Myrosinase-binding protein-like At1g52030 (MBP)	28	4.6
47	ADRM1_RAT (Q9JMB5) Adhesion-regulating molecule 1 precursor (110...	28	4.6
48	ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (1...	28	4.6
49	SYNPO_RAT (Q9Z327) Synaptopodin	28	4.6
50	SCD6_YEAST (P45978) Protein SCD6	28	4.6
51	SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-rel...	28	4.6
52	SAK1_SCHPO (P48383) Protein sak1	28	4.6
53	ASGX_ECOLI (P37595) Putative L-asparaginase precursor (EC 3.5.1....	28	4.6
54	SMAD5_MOUSE (P97454) Mothers against decapentaplegic homolog 5 (...	28	4.6
55	SMAD5_HUMAN (Q99717) Mothers against decapentaplegic homolog 5 (...	28	4.6
56	NFAC3_HUMAN (Q12968) Nuclear factor of activated T-cells, cytopl...	28	4.6
57	NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)	28	4.6
58	BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain ...	28	4.6
59	POP1_CAEEL (Q10666) Protein pop-1 (Posterior pharynx defect prot...	28	4.6
60	CNGB3_HUMAN (Q9NQW8) Cyclic nucleotide-gated cation channel beta...	28	4.6
61	TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (...	28	6.1
62	SAV1_HUMAN (Q9H4B6) Salvador homolog 1 protein (45 kDa WW domain...	28	6.1
63	RBL2_HUMAN (Q08999) Retinoblastoma-like protein 2 (130 kDa retin...	28	6.1
64	BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)	28	6.1
65	BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)	28	6.1
66	PACC_USTMA (Q6H8R9) pH-response transcription factor pacC/RIM101	28	6.1
67	MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia p...	28	6.1
68	COOF_RHORU (P31894) Iron-sulfur protein	28	6.1
69	AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-al...	28	7.9
70	BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain ...	28	7.9
71	HOW_DROME (O01367) Protein held out wings (KH-domain protein KH9...	28	7.9
72	DP87_DICDI (Q04503) Prespore protein DP87 precursor	28	7.9
73	VGLI_HHV2H (P13291) Glycoprotein I	28	7.9
74	VGLI_HHV23 (P06764) Glycoprotein I	28	7.9
75	CCPA_ACEXY (P37697) Cellulose-complementing protein	28	7.9
76	SEC16_YEAST (P48415) Multidomain vesicle coat protein	28	7.9
77	FTSK_SALTY (Q8ZQD5) DNA translocase ftsK	28	7.9
78	SYP1_YEAST (P25623) Suppressor of yeast profilin deletion	28	7.9
79	FTF1B_DROME (Q05192) Nuclear hormone receptor FTZ-F1 beta (dHR39)	28	7.9

>ASPG2_ARATH (Q8GXG1) Probable L-asparaginase 2 precursor (EC 3.5.1.1)|
           (L-asparagine amidohydrolase 2) [Contains:
           L-asparaginase 2 alpha subunit; L-asparaginase 2 beta
           subunit]
          Length = 325

 Score = 79.7 bits (195), Expect(2) = 2e-17
 Identities = 37/46 (80%), Positives = 38/46 (82%)
 Frame = +3

Query: 48  RXRLDEGFAGLIAVSGTGEVAYGFNCTGMFRGCATEDGFMEVGIWE 185
           + RLDEGFAGLIAVS  GEV  GFN  GMFRGCATEDGFMEV IWE
Sbjct: 280 KHRLDEGFAGLIAVSNKGEVVCGFNSNGMFRGCATEDGFMEVAIWE 325



 Score = 26.6 bits (57), Expect(2) = 2e-17
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 2   EYXGLPLQEAVDFCVK 49
           EY GL LQEAVD+ +K
Sbjct: 265 EYKGLNLQEAVDYVIK 280

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>ASPG_LUPLU (Q9ZSD6) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase) [Contains: L-asparaginase alpha subunit;
           L-asparaginase beta subunit]
          Length = 325

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 27/43 (62%), Positives = 31/43 (72%)
 Frame = +3

Query: 54  RLDEGFAGLIAVSGTGEVAYGFNCTGMFRGCATEDGFMEVGIW 182
           R  +G  GLIAVS  GE+A  FN TGMFR CATEDG+ E+ IW
Sbjct: 280 RTPKGTVGLIAVSAAGEIAMPFNTTGMFRACATEDGYSEIAIW 322

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>ASPG_LUPAL (P50288) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase) [Contains: L-asparaginase alpha subunit;
           L-asparaginase beta subunit]
          Length = 325

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 27/43 (62%), Positives = 31/43 (72%)
 Frame = +3

Query: 54  RLDEGFAGLIAVSGTGEVAYGFNCTGMFRGCATEDGFMEVGIW 182
           R  +G  GLIAVS  GE+A  FN TGMFR CATEDG+ E+ IW
Sbjct: 280 RTPKGTVGLIAVSAAGEIAMPFNTTGMFRACATEDGYSEIAIW 322

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>ASPG_LUPAR (P30362) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase) [Contains: L-asparaginase alpha subunit;
           L-asparaginase beta subunit] (Fragment)
          Length = 306

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 27/43 (62%), Positives = 30/43 (69%)
 Frame = +3

Query: 54  RLDEGFAGLIAVSGTGEVAYGFNCTGMFRGCATEDGFMEVGIW 182
           R  +G  GLIAVS  GE+A  FN TGMFR CATEDG  E+ IW
Sbjct: 261 RTPKGTVGLIAVSAAGEIAMPFNTTGMFRACATEDGNSEIAIW 303

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>ASPG_LUPAN (P30364) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase) [Contains: L-asparaginase alpha subunit;
           L-asparaginase beta subunit]
          Length = 325

 Score = 57.4 bits (137), Expect = 9e-09
 Identities = 26/43 (60%), Positives = 30/43 (69%)
 Frame = +3

Query: 54  RLDEGFAGLIAVSGTGEVAYGFNCTGMFRGCATEDGFMEVGIW 182
           R  +G  GLIAVS  GE+A  FN TGMFR  ATEDG+ E+ IW
Sbjct: 280 RTPKGTVGLIAVSAAGEIAMPFNTTGMFRASATEDGYSEIAIW 322

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>ASPG1_ARATH (P50287) L-asparaginase 1 precursor (EC 3.5.1.1) (L-asparagine|
           amidohydrolase 1) [Contains: L-asparaginase 1 alpha
           subunit; L-asparaginase 1 beta subunit]
          Length = 315

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +3

Query: 66  GFAGLIAVSGTGEVAYGFNCTGMFRGCATEDGFMEVGIW 182
           G  GL+AVS  GEV   FN TGMFR CA+EDG+ E+ IW
Sbjct: 274 GSCGLVAVSANGEVTMPFNTTGMFRACASEDGYSEIAIW 312

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>FTSK_YERPE (Q8ZGC7) DNA translocase ftsK|
          Length = 1305

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = -1

Query: 277 HGXRRMAKCTHTHALSSKFRPATATSPA-RAHSQMPTSMNPSSVAQPLNMPVQLNPYATS 101
           H      + T+  +   +  PA  + P   + S + TS+ P+S+A     PV   P A S
Sbjct: 721 HTQSTYGQSTYGQSTYGQSTPAPVSQPVVTSASAISTSVTPTSIASLNTAPVSAAPVAPS 780

Query: 100 PVPDTAMSPANPSSSRXLDAEVHGLLQR 17
           P P     PA    +  +D+ +H  L R
Sbjct: 781 PQP-----PAFSQPTAAMDSLIHPFLMR 803

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = -1

Query: 217 PATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSS 56
           P+   SPA      P S +P S   P   PV  +P   SP P    SPA P+ S
Sbjct: 291 PSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAPPTPS 344



 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = -1

Query: 217 PATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANP 65
           P +  SPA      P   +PS  A P   PV  +P   SP P +   PA P
Sbjct: 217 PPSPPSPAPPSPPSPAPPSPSPPAPP--SPVPPSPAPPSPAPPSPKPPAPP 265



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -1

Query: 217 PATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPS 62
           P+    P+ +    P+   PS      + PV  +P   SP P    SPA PS
Sbjct: 155 PSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPS 206

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>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -1

Query: 217 PATATSPARAHSQMPTSMNPSSVAQPLNMPVQ---LNPYATSPVPDTAMSPANP 65
           PA  T PA   +  PTS  P + A+P+N P+    +    T+P P +A  P++P
Sbjct: 127 PAPPTRPANP-TPTPTSSPPKTAARPINAPISRPAIPSRPTAPTPRSANKPSSP 179

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>RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif protein 10)|
           (DXS8237E)
          Length = 929

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 18/77 (23%), Positives = 35/77 (45%)
 Frame = -1

Query: 268 RRMAKCTHTHALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPD 89
           ++ A+ + +   ++  +  T  SPA   S++ +  +PSS   P   P     Y+  PVPD
Sbjct: 508 QQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQESYSQYPVPD 567

Query: 88  TAMSPANPSSSRXLDAE 38
            +    + +S    D +
Sbjct: 568 VSTYQYDETSGYYYDPQ 584

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>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like|
           protein)
          Length = 349

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -1

Query: 217 PATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSS 56
           P  A SP  + +  P +  P S+A     PV  +P  + P P  + SP +PSS+
Sbjct: 181 PGGAHSPKSSSAVSPATSPPGSMAPKSGSPV--SPTTSPPAPPKSTSPVSPSSA 232

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>MK07_HUMAN (Q13164) Mitogen-activated protein kinase 7 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 5) (ERK-5) (ERK4)
           (BMK1 kinase)
          Length = 815

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 22/59 (37%), Positives = 27/59 (45%)
 Frame = -1

Query: 238 ALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPS 62
           AL+S   PA A +P     Q PTS  P  +AQP     Q     + PVP  A  P  P+
Sbjct: 581 ALTSVPAPAPAPTPTPTPVQ-PTSPPPGPLAQPTGPQPQSAGSTSGPVPQPACPPPGPA 638

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>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)|
          Length = 2414

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = -1

Query: 241  HALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANP 65
            ++LS++ R        R  SQ P S +PS   QP   P  ++P  +SP P    + ANP
Sbjct: 2301 NSLSNQVRSPQPVPSPRPQSQPPHS-SPSPRMQPQPSPHHVSPQTSSPHPGLVAAQANP 2358

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>PODXL_RABIT (Q28645) Podocalyxin-like protein 1 precursor|
          Length = 551

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -1

Query: 220 RPATATSPAR-AHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSSRXLD 44
           +PAT T  A  A +Q   S  P S A P +     +P+ +SP P  A+ P+ PS++   D
Sbjct: 228 KPATLTPVASSAETQGMPSPMPPSPASPSS-----SPFPSSPSPSPALQPSGPSAAGTED 282

Query: 43  AEVHG 29
               G
Sbjct: 283 TTGRG 287

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>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -1

Query: 220 RPATATSPARAHSQMPTSMNPSSVAQPLNMPVQL-NPYATSPVPDTAMSPANPSSSR 53
           RPA  ++PA   S  PT   P+  A P +   Q   P A +P P     P  P+  R
Sbjct: 66  RPAAPSAPASTSSSAPTPAAPARQASPASAHQQAPTPGAPTPRPQGGARPGMPTPGR 122

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>RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif protein 10)|
           (S1-1 protein)
          Length = 852

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -1

Query: 211 TATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSSRXLDAE 38
           T  SPA   S++ +  +PSS   P   P     Y+  PVPD +    + +S    D +
Sbjct: 450 TIMSPAVLKSELQSPTHPSSALPPATSPTAPESYSQYPVPDVSTYQYDETSGYYYDPQ 507

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>WHRN_HUMAN (Q9P202) Whirlin (Autosomal recessive deafness type 31 protein)|
          Length = 907

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 14/75 (18%)
 Frame = -1

Query: 193 RAHSQMPTSMNPSSVAQPLNMPVQLNPYA-TSPVPDTA-------------MSPANPSSS 56
           R   Q P+SM PS      + P   +P A T+P P T+             +SPANPSS 
Sbjct: 604 REDLQPPSSM-PSCSGTVFSAPQNRSPPAGTAPTPGTSSAQDLPSSPIYASVSPANPSSK 662

Query: 55  RXLDAEVHGLLQRQP 11
           R LDA +  L+ + P
Sbjct: 663 RPLDAHL-ALVNQHP 676

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>Y598_TREPA (O83607) Hypothetical protein TP0598|
          Length = 605

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 23/80 (28%), Positives = 37/80 (46%)
 Frame = -1

Query: 268 RRMAKCTHTHALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPD 89
           +R AK   T    ++F P+  ++   A S    S N SS + P +   +L P + +P  +
Sbjct: 15  KRAAKDVFTEP--ARFYPSQKSTLESARSDTSESENASS-SVPSHSQQELAPDSAAPARN 71

Query: 88  TAMSPANPSSSRXLDAEVHG 29
           + +SPA P         VHG
Sbjct: 72  SVLSPAPPERREKQGTAVHG 91

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>SPHK2_MOUSE (Q9JIA7) Sphingosine kinase 2 (EC 2.7.1.-) (SK 2) (SPK 2)|
          Length = 617

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -1

Query: 214 ATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANP 65
           A A +PA  HS +  S+  S +  PL  P  ++P +  P+PD +++   P
Sbjct: 369 APAPAPAATHSPLHRSV--SDLPLPLPQPALVSPGSPEPLPDLSLNGGGP 416

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>MILK2_HUMAN (Q8IY33) MICAL-like protein 2|
          Length = 904

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 23/70 (32%), Positives = 26/70 (37%)
 Frame = -1

Query: 238 ALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSS 59
           A  S + PA   SPARA                 ++P   NP ATS       SPA PS 
Sbjct: 282 ARPSAWEPAAGNSPARA-----------------SVPAAPNPAATSATSVHVRSPARPSE 324

Query: 58  SRXLDAEVHG 29
           SR       G
Sbjct: 325 SRLAPTPTEG 334

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>CRSP2_HUMAN (O60244) CRSP complex subunit 2 (Cofactor required for Sp1|
            transcriptional activation subunit 2) (Transcriptional
            coactivator CRSP150) (Vitamin D3 receptor-interacting
            protein complex 150 kDa component) (DRIP150) (Thyroid
            hormone receptor-ass
          Length = 1454

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = -1

Query: 241  HALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQ--LNPYATSPVPDTAMSPAN 68
            H       P T  SP+      P S   S  +    MP     NP   SPVPD + SP  
Sbjct: 1088 HGTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPRA 1147

Query: 67   PSSSRXL 47
             +SS+ +
Sbjct: 1148 GTSSQTM 1154

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>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)|
          Length = 415

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -1

Query: 235 LSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPV--QLNPYATSP-VPDTAMSPANP 65
           LS    PA +  P R  S       P S AQPL+     Q  P A  P  P  A  PA+P
Sbjct: 221 LSGLGPPAGSPLPQRLPSPTSAPQQPVSQAQPLSQAQGRQSRPVAGGPGAPPAARPPASP 280

Query: 64  SSSR 53
           S  R
Sbjct: 281 SPQR 284

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>SIMA_DROME (Q24167) Protein similar|
          Length = 1507

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = -1

Query: 262 MAKCTHTHALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPV---- 95
           M  C     ++S      +T+ +  H Q P+S   SS + P N     N YA SP+    
Sbjct: 690 MGTCLLPEDINSLDSTTCSTTASGQHYQSPSS---SSTSAPSNTSSSNNSYANSPLSPLT 746

Query: 94  PDTAMSPANPS 62
           P++  + +NPS
Sbjct: 747 PNSTATASNPS 757

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>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID|
           domain-containing protein 1A) (SWI/SNF-related,
           matrix-associated, actin-dependent regulator of
           chromatin subfamily F member 1) (SWI-SNF complex protein
           p270) (B120) (SWI-like pr
          Length = 2285

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -1

Query: 193 RAHSQMPTSMNPSSVAQPLNMPVQLNPYA---TSPVPDTAMSPANPSSSR 53
           ++ S M  SMN SS+AQ     +Q NP     +SP P +A+SP  PS  +
Sbjct: 732 QSDSIMHPSMNQSSIAQDRGY-MQRNPQMPQYSSPQPGSALSPRQPSGGQ 780

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>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A|
           (Transcription termination factor I-interacting protein
           5) (TTF-I-interacting protein 5) (Tip5)
          Length = 1850

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
 Frame = -1

Query: 232 SSKF-RPATATSPARAHSQM------PTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSP 74
           SS F RP T  +P +  S        PT+   +S+     +   ++P A+SPVP      
Sbjct: 362 SSNFQRPLTEPAPDQPPSTQLHPAVSPTASPAASLTASAEISPAVSPVASSPVPPEVFVA 421

Query: 73  ANPSSSRXLDA 41
            +P+SS  L A
Sbjct: 422 VSPASSPALPA 432

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>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)|
          Length = 2001

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 23/73 (31%), Positives = 31/73 (42%)
 Frame = -1

Query: 229 SKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSSRX 50
           SK  P T+T+P+RA   M  S N  S ++P+  P   +P       D  M      SS  
Sbjct: 454 SKMSPGTSTNPSRAAGVMSFS-NILSSSEPVPRPRATSPNNPDDDDDVPMKVERADSSEK 512

Query: 49  LDAEVHGLLQRQP 11
           +  E      RQP
Sbjct: 513 VVKEKKERKPRQP 525

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>EGR1_POEGU (O73693) Early growth response protein 1 (EGR-1) (Zinc finger|
           protein ZENK) (Fragment)
          Length = 193

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -1

Query: 226 KFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPAN 68
           K  PA+  SP  A+S   T+  PSS+      PV+     +SP P +  SP +
Sbjct: 84  KAAPASTASPIPAYSSSVTTSYPSSITTTYPSPVR--TAYSSPAPSSYPSPVH 134

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>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC|
           3.4.21.97); Capsid assembly protein; Gene UL80 protein;
           Gene UL80.5 protein; C-terminal peptide]
          Length = 708

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = -1

Query: 217 PATATSPARAHSQMPTSMNPSSVAQPLNMPVQLN---PYATSPVPDTAMSPANPSSS 56
           PA   SP+   ++ P S++PS  A+  +M   L+   P AT+P P   ++ A+P+ S
Sbjct: 308 PALPASPSVLPAESPPSLSPSEPAEAASMSHPLSAAVPAATAP-PGATVAGASPAVS 363

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>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced|
           PDZ-motif protein) (Protein cypher)
          Length = 727

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -1

Query: 217 PATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPA 71
           PA+  SP+   +  PT   PS    P   P     Y  SPVP    SPA
Sbjct: 412 PASTYSPSPGANYSPTPYTPSPA--PAYTPSPAPAYTPSPVPTYTPSPA 458

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>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed|
          Length = 596

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 18/59 (30%), Positives = 25/59 (42%)
 Frame = -1

Query: 244 THALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPAN 68
           T+ LS +F  ATA    + H Q P    P S       P  ++P    P P   + PA+
Sbjct: 132 TNILSDRFGKATAEQQQQPHPQPPAIREPIS-------PGPIHPAVLLPYPQHVLHPAH 183

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>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
 Frame = -1

Query: 229 SKFRPATATSPARAHSQMPTSMNPSSVAQP-------LNMPVQLNPYATSP 98
           S   PAT TS   +  Q+P     ++V +P       L+ PVQ    ATSP
Sbjct: 217 SHLAPATVTSTPASERQLPARQKDTAVRRPIPPADGCLHTPVQAAGLATSP 267

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>YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2|
          Length = 1422

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/71 (22%), Positives = 33/71 (46%)
 Frame = -1

Query: 268 RRMAKCTHTHALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPD 89
           +++  C+H +   S F+P  ++      SQ+P   +P    QP+ M  ++   +    P 
Sbjct: 415 QKVTFCSHGN---SAFQPIASSCKIVPQSQVPNPESPGKSFQPITMSCKIVSGSPISTPS 471

Query: 88  TAMSPANPSSS 56
            +  P  P+S+
Sbjct: 472 PSPLPRTPTST 482

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>TOXE_COCCA (O74205) Transcription factor TOXE|
          Length = 441

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -1

Query: 220 RPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSSRXLDA 41
           R    + P+ +H   PTS NPS++    +  +  +   TS  P  A    +P      +A
Sbjct: 222 REPCGSCPSSSHGYSPTSGNPSTLLLTPSESLMNSVIVTSDSPLLAADDKSPGDLVISEA 281

Query: 40  EVHG 29
             HG
Sbjct: 282 NTHG 285

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>YETS2_MOUSE (Q3TUF7) YEATS domain-containing protein 2|
          Length = 1407

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/67 (23%), Positives = 30/67 (44%)
 Frame = -1

Query: 256 KCTHTHALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMS 77
           K T +   +S F+P  ++      SQ+P   +P    QP+ M  ++   +    P  +  
Sbjct: 415 KVTFSSHGNSAFQPIASSCKIVPQSQVPNPESPGKSFQPITMSCKIVSGSPISTPSPSPL 474

Query: 76  PANPSSS 56
           P  P+S+
Sbjct: 475 PRTPTST 481

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>NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neurofilament|
           protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1026

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -1

Query: 217 PATATSPARAHSQMPT-SMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSS 59
           P  A SPA+  ++ P  + +P     P+    +    A SPV + A SPA   S
Sbjct: 581 PEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKS 634

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>MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)|
          Length = 1324

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
 Frame = -1

Query: 232 SSKFRPATATSPARAHSQMPTSMNPS------SVAQPLNMPVQLNPYATSPVPDTAMSPA 71
           SS   P+ + SP+ ++ + P S NP+      S + P   P +LNP  +S +P  + SP 
Sbjct: 30  SSSSSPSPSPSPSLSNKKTPKSNNPNPKSPSPSPSPPKKTP-KLNPNPSSNLPARSPSPG 88

Query: 70  NPSSS 56
             + S
Sbjct: 89  PDTPS 93

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>RBL2_MOUSE (Q64700) Retinoblastoma-like protein 2 (130 kDa|
            retinoblastoma-associated protein) (PRB2) (P130) (RBR-2)
          Length = 1135

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/62 (24%), Positives = 31/62 (50%)
 Frame = -1

Query: 220  RPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSSRXLDA 41
            R  + +S +R+H   PT +N    ++  +  ++ N  +T PVP  + +P  P+      +
Sbjct: 932  RRNSGSSESRSHQNSPTELNTDRASRDSSPVMRSN--STLPVPQPSSAPPTPTRLTGASS 989

Query: 40   EV 35
            +V
Sbjct: 990  DV 991

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>IGA4_HAEIN (P45386) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1|
            protease)
          Length = 1849

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -1

Query: 217  PATATSPARAHSQMPTSMNPSSVAQP-LNMPVQLNPYATSPVPDTAMSPANPSS 59
            PA AT  A A  Q  T   P+  AQP +      N   T+P  DTA    NP+S
Sbjct: 1040 PAPATESAIASEQPET--RPAETAQPAMEETNTANSTETAPKSDTATQTENPNS 1091

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>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)|
          Length = 1285

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
 Frame = -1

Query: 175 PTSMNPSSVAQPLNMPVQLNPYA--------TSPVPDTAMSPANPSSSRXLDAEV 35
           P S   SS+    + PV  +P A        + PVP  + +PA+P+S+R L   +
Sbjct: 659 PRSPRQSSIGNSPSGPVLASPQAGIIPAEAVSMPVPAASPTPASPASNRALTPSI 713

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>RD23D_ARATH (Q84L30) Putative DNA repair protein RAD23-4 (RAD23-like protein 4)|
           (AtRAD23-4)
          Length = 378

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -1

Query: 214 ATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMS 77
           +TA++PA + +Q  T   P   A   ++PV  +  AT+  P TA S
Sbjct: 84  STASAPAPSATQPQTVATPQVSAPTASVPVPTSGTATAAAPATAAS 129

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>RD23B_MOUSE (P54728) UV excision repair protein RAD23 homolog B (mHR23B) (XP-C|
           repair-complementing complex 58 kDa protein) (p58)
          Length = 416

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 21/77 (27%), Positives = 31/77 (40%)
 Frame = -1

Query: 244 THALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANP 65
           T AL+    PA+ T  +   S  P     +   +P   P Q  P  TSP P  + +P + 
Sbjct: 114 TPALAPTSTPASTTPASTTASSEPAPAGATQPEKPAEKPAQ-TPVLTSPAPADS-TPGDS 171

Query: 64  SSSRXLDAEVHGLLQRQ 14
           S S   +     L+  Q
Sbjct: 172 SRSNLFEDATSALVTGQ 188

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>VID21_ASPFU (Q4WP03) Chromatin modification-related protein vid21|
          Length = 1467

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = -1

Query: 241  HALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANP 65
            +AL +   P    S  R H Q   +  P     P+N P+  NP A   +P T M P  P
Sbjct: 1137 NALPNGIPPGMGVSQGRPHMQGVPAGGP-----PMNGPIPPNPMAMKMMPQTGM-PQGP 1189

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>OAF_DROME (Q9NLA6) Out at first protein [Contains: Out at first short|
           protein]
          Length = 487

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 241 HALSSKFRPATATSPARAHSQM-PTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANP 65
           H   S+ +P+      + HSQ+ PTS + SS + P             P P T+ SP + 
Sbjct: 427 HQSQSQHKPSRQQKQHQHHSQVAPTSHHQSSSSTP-------------PTPSTSSSPPSS 473

Query: 64  SSSRXLDA 41
           SSS    A
Sbjct: 474 SSSSSSSA 481

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>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced|
           PDZ-motif protein) (Protein cypher) (Protein oracle)
          Length = 723

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -1

Query: 217 PATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPA 71
           PA++ SP+   +  PT   PS    P   P     Y  SP P  + SPA
Sbjct: 408 PASSYSPSPGANYSPTPYTPSPA--PAYTPSPAPTYTPSPAPTYSPSPA 454

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>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = -1

Query: 244 THALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANP 65
           TH+ SS    +T TS +   +   +S + SS +         +  +TS  P T  S  + 
Sbjct: 162 THSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSA 221

Query: 64  SSS 56
           SSS
Sbjct: 222 SSS 224

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>MB11_ARATH (Q9SAV1) Myrosinase-binding protein-like At1g52030 (MBP)|
          Length = 642

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = -1

Query: 238 ALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSS 59
           AL + F P  A +PA A +  P    P+    P + PV       +P P  A +PA P+ 
Sbjct: 284 ALGAHFAPLPAPTPAPAPAPAPAPA-PAPSPAPASAPVP------APAPTPAPAPAPPNK 336

Query: 58  SRXL 47
              L
Sbjct: 337 VEAL 340

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>ADRM1_RAT (Q9JMB5) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110)
          Length = 407

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = -1

Query: 214 ATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSSRXLD 44
           A+ATSP+ A    P+S N +S A     P+QL+   +  +  T   PA P  S+ +D
Sbjct: 237 ASATSPSPA----PSSGNGTSTAASPTQPIQLSDLQS--ILATMNVPAGPGGSQQVD 287

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>ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110) (ARM-1)
          Length = 407

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = -1

Query: 214 ATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSSRXLD 44
           A+ATSP+ A    P+S N +S A     P+QL+   +  +  T   PA P  S+ +D
Sbjct: 237 ASATSPSPA----PSSGNGTSTAASPTQPIQLSDLQS--ILATMNVPAGPGGSQQVD 287

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>SYNPO_RAT (Q9Z327) Synaptopodin|
          Length = 931

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 16/82 (19%)
 Frame = -1

Query: 259  AKCTHTHALSSKFRPATATSPARAHS-----QMPTSMNPSSVAQP---------LNMPVQ 122
            ++ T + A S    P  A SPA+  S      +P +  P S A P          N PVQ
Sbjct: 817  SRATSSRASSRTVSPRAA-SPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYNAPVQ 875

Query: 121  --LNPYATSPVPDTAMSPANPS 62
              L P A SP   + +SP +PS
Sbjct: 876  DSLQPTAVSPTYSSDISPVSPS 897

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>SCD6_YEAST (P45978) Protein SCD6|
          Length = 349

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = -1

Query: 232 SSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYA--TSPVPDTAMSPANPSS 59
           +S+F P  A SP +A +Q     NP       N+P  +  Y   T    +TA +  N  S
Sbjct: 95  ASQFPPQQAQSPPQAQAQAHVQTNPQVPKPESNVPAAVAGYGVYTPTSTETATASMNDKS 154

Query: 58  S 56
           +
Sbjct: 155 T 155

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>SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-related protein B)|
          Length = 1268

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 217 PATATSPARAHSQMPTSMNPSSVAQPLNMPVQ 122
           P  A++PA A +  P    PS +A+PL M +Q
Sbjct: 433 PDPASAPAPASAPAPVVPQPSKMAKPLAMAIQ 464

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>SAK1_SCHPO (P48383) Protein sak1|
          Length = 766

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 199 PARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTA 83
           P  +HS +P+   P SV+QP      +  +++S VP T+
Sbjct: 287 PQLSHSSVPSPAPPRSVSQPTYFSQPMPQFSSSFVPGTS 325

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>ASGX_ECOLI (P37595) Putative L-asparaginase precursor (EC 3.5.1.1)|
           (L-asparagine amidohydrolase)
          Length = 321

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 66  GFAGLIAVSGTGEVAYGFNCTGMFR 140
           G  GLIA+   G VA  FN  GM+R
Sbjct: 273 GSGGLIAIDHEGNVALPFNTEGMYR 297

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>SMAD5_MOUSE (P97454) Mothers against decapentaplegic homolog 5 (SMAD 5)|
           (Mothers against DPP homolog 5) (Smad5) (mSmad5)
           (Dwarfin-C) (Dwf-C)
          Length = 465

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -1

Query: 241 HALSSKFRPATATSPARAHSQMPTSMN-PSSVAQPLNMPVQLNPYAT-SPVPDTAMSPAN 68
           H+L  +FR  +   P      MP +   P S  QP N P  L+P +   P P ++  P +
Sbjct: 151 HSLLVQFRNLSHNEP-----HMPQNATFPDSFHQPNNAPFPLSPNSPYPPSPASSTYPNS 205

Query: 67  PSSS 56
           P+SS
Sbjct: 206 PASS 209

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>SMAD5_HUMAN (Q99717) Mothers against decapentaplegic homolog 5 (SMAD 5)|
           (Mothers against DPP homolog 5) (Smad5) (hSmad5) (JV5-1)
          Length = 465

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -1

Query: 241 HALSSKFRPATATSPARAHSQMPTSMN-PSSVAQPLNMPVQLNPYAT-SPVPDTAMSPAN 68
           H+L  +FR  +   P      MP +   P S  QP N P  L+P +   P P ++  P +
Sbjct: 151 HSLLVQFRNLSHNEP-----HMPQNATFPDSFHQPNNTPFPLSPNSPYPPSPASSTYPNS 205

Query: 67  PSSS 56
           P+SS
Sbjct: 206 PASS 209

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>NFAC3_HUMAN (Q12968) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)|
            (NFATc3) (T cell transcription factor NFAT4) (NF-AT4)
            (NFATx)
          Length = 1075

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -1

Query: 214  ATATSPARAH--SQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSS 59
            AT  SPA +H  +  P S  PS   QP+      +  A+SP P T M     S+
Sbjct: 923  ATTASPAASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSGQHST 976

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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -1

Query: 202 SPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSSRXL 47
           SP+ + S  P S +PS  + P+  P + +P + SP P  + SP +PS S  L
Sbjct: 164 SPSPSPSPSP-SPSPSPRSTPIPHPRKRSPASPSPSPSLSKSP-SPSESPSL 213

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>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5) (hWALp3)
          Length = 1878

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
 Frame = -1

Query: 211  TATSPARAHSQ----MPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSSRXLD 44
            TA+SPARA  +     P SM P  +  P+       P A         +PA P     L 
Sbjct: 1154 TASSPARARGRPRKTKPGSMQPRHLKSPVRGQDSEQPQAQLQPEAQLHAPAQPQPQLQLQ 1213

Query: 43   AEVH-GLLQRQ 14
             + H G L+++
Sbjct: 1214 LQSHKGFLEQE 1224

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>POP1_CAEEL (Q10666) Protein pop-1 (Posterior pharynx defect protein 1)|
          Length = 438

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
 Frame = -1

Query: 235 LSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYAT---SP---VPDTAMSP 74
           L S F      SP+        S   S+ A P+ MP+ +NPYA    SP    P  AMSP
Sbjct: 60  LKSAFPKVEPMSPSFPGLMSHFSPGYSAAALPMFMPLFMNPYAAALRSPSLMFPMGAMSP 119

Query: 73  ANP 65
             P
Sbjct: 120 TFP 122

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>CNGB3_HUMAN (Q9NQW8) Cyclic nucleotide-gated cation channel beta 3 (CNG channel|
           beta 3) (Cyclic nucleotide-gated channel beta 3) (Cone
           photoreceptor cGMP-gated channel beta subunit) (Cyclic
           nucleotide-gated cation channel modulatory subunit)
          Length = 809

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
 Frame = -1

Query: 238 ALSSKFRPATATSP----------ARAHSQMPTSMNPSSVAQPLN-MPVQ--LNPYATSP 98
           +L +K  P T+  P            +   + T+ +P + A+P   +P Q  ++P    P
Sbjct: 52  SLKTKSTPVTSEEPHTNIQDKLSKKNSSGDLTTNPDPQNAAEPTGTVPEQKEMDPGKEGP 111

Query: 97  VPDTAMSPANPSSSRXLDAEVHGLLQR 17
                  PA P  +   DA++H L++R
Sbjct: 112 NSPQNKPPAAPVINEYADAQLHNLVKR 138

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>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)|
           (Tripartite motif protein 33)
          Length = 1142

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -3

Query: 224 VQASHSDIACARSLPDADLHESVLGGAASEHAGAVEP 114
           V A+ S  A A S+P A +  +V GGAAS  A A  P
Sbjct: 67  VAAASSSSAPAASVPAASVGSAVPGGAASTPAPAAAP 103

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>SAV1_HUMAN (Q9H4B6) Salvador homolog 1 protein (45 kDa WW domain protein)|
           (hWW45)
          Length = 383

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = -1

Query: 247 HTHALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPD 89
           HT+   +++R   A S  R     P +  P    +  ++ V  NPY T+ +PD
Sbjct: 255 HTNK-KAQYRHPCAPSVPRYDQPPPVTYQPQQTERNQSLLVPANPYHTAEIPD 306

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>RBL2_HUMAN (Q08999) Retinoblastoma-like protein 2 (130 kDa|
            retinoblastoma-associated protein) (PRB2) (P130) (RBR-2)
          Length = 1139

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -1

Query: 220  RPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPS 62
            R  + +S +R+H   PT +N    ++  + PV +   +T PVP  + +P  P+
Sbjct: 938  RRNSGSSDSRSHQNSPTELNKDRTSRD-SSPV-MRSSSTLPVPQPSSAPPTPT 988

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>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
 Frame = -1

Query: 280  PHGXRRMAKCTHTHALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPV----QLNP 113
            P G     +      LS+         P+RA+S   +S  P S + P   P     ++ P
Sbjct: 1438 PSGLAAAGRAAREKPLSASDGEGGTPQPSRAYSYFASSSPPLSPSSPSESPTFSPGKMGP 1497

Query: 112  YATSPVPDTAMSPANPS 62
             AT+       SPA  S
Sbjct: 1498 RATAEFSTQTPSPAPAS 1514

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>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)|
          Length = 1425

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
 Frame = -1

Query: 217  PATATSPARAHS------QMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSSS 56
            P T  SPA   S        PT+  P+SV  P ++P    PY   P P  + +P +   S
Sbjct: 952  PLTMASPAMLGSVESGGPPPPTASQPASVNIPGSLP-SSTPYPMPPEPTLSQNPLSIMMS 1010

Query: 55   R 53
            R
Sbjct: 1011 R 1011

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>PACC_USTMA (Q6H8R9) pH-response transcription factor pacC/RIM101|
          Length = 791

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = -1

Query: 244 THALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANP 65
           TH  ++  R A A  P+RAHS  P ++    V QP    V+ +  A + VP  A   A  
Sbjct: 464 THNTNAAGR-AIAQLPSRAHSHFPDALLSHQVHQPAYDSVRFSRGA-AVVPQLAPMDAGG 521

Query: 64  SSSRXLDA 41
            S R ++A
Sbjct: 522 HSYRRVEA 529

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>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
 Frame = -1

Query: 205  TSPARAHSQMPTSMNPSSVAQPLNMP------VQLNPYATSPVPDTAMSPANPSS 59
            TSPAR  S      N +S   PLN P       QL+    +P P T +S ANP +
Sbjct: 3320 TSPARMPSLPGWQSNSASAHLPLNPPRIQPPIAQLSLKTCTPAPGT-VSSANPQN 3373

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>COOF_RHORU (P31894) Iron-sulfur protein|
          Length = 190

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
 Frame = +1

Query: 103 RWHTGSTAPACSEAAPPRT------DSWRSASGSERAQAMS 207
           R  TG TAPAC EA P +       D++R A    RA+ ++
Sbjct: 140 RASTGKTAPACVEACPTKAIRMVDLDAYRIALREARAREIA 180

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>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase) (Isozyme 1B)
          Length = 348

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 106 WHTGSTAPACSEAAPPRTDSWRSASGSERAQAMSLW 213
           W TGS   A   A P R+ S   AS +   +A+ LW
Sbjct: 240 WSTGSIVSAAPTAMPRRSTSPPRASSTSPWRAIELW 275

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>BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain 2B (hWALp4)|
          Length = 1972

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -1

Query: 244  THALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPV 95
            THA  S     T  S   + S  PT   P+ +      PV LNP+A SP+
Sbjct: 1378 THADMSTASLVTPQSQPPSKSPSPT---PAPLGSSAQNPVGLNPFALSPL 1424

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>HOW_DROME (O01367) Protein held out wings (KH-domain protein KH93F) (Putative|
           RNA-binding protein) (Protein muscle-specific) (Protein
           wings held out) (Protein struthio) (Quaking-related 93F)
          Length = 405

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -1

Query: 148 AQPLNMPVQLNPYATSPVPDTAMSPANPSSSRXLDAEVHGLL 23
           A PL  P+ LNP  T P    ++  A  + +   D   HG++
Sbjct: 303 AAPLGAPLILNPRMTVPTTAASILSAQAAPTAAFDQTGHGMI 344

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>DP87_DICDI (Q04503) Prespore protein DP87 precursor|
          Length = 555

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 23/66 (34%), Positives = 31/66 (46%)
 Frame = -1

Query: 238 ALSSKFRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSS 59
           A SS    A ++SP+ + +    S  PSS A   + P      A+S  P +A S A PSS
Sbjct: 478 AASSADSSAASSSPSSSAASSAASSEPSSSAASSSAPSS----ASSSAPSSASSSA-PSS 532

Query: 58  SRXLDA 41
           S    A
Sbjct: 533 SASSSA 538

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>VGLI_HHV2H (P13291) Glycoprotein I|
          Length = 372

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +1

Query: 112 TGSTAPACSEAAPPRTDSWRSASGSERAQAMSLWLA*TLKIVRVCVCIWPSCXC 273
           TG+ APA  E APP  +S RSAS S     ++  +   +    +      SC C
Sbjct: 229 TGTPAPASGEIAPP--NSTRSASESRHRLTVAQVIQIAIPASIIAFVFLGSCIC 280

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>VGLI_HHV23 (P06764) Glycoprotein I|
          Length = 372

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +1

Query: 112 TGSTAPACSEAAPPRTDSWRSASGSERAQAMSLWLA*TLKIVRVCVCIWPSCXC 273
           TG+ APA  E APP  +S RSAS S     ++  +   +    +      SC C
Sbjct: 229 TGTPAPASGERAPP--NSTRSASESRHRLTVAQVIQIAIPASIIAFVFLGSCIC 280

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>CCPA_ACEXY (P37697) Cellulose-complementing protein|
          Length = 353

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 175 PTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSP 74
           P +  P + A P   PVQ  P   +PVP   + P
Sbjct: 108 PVTYEPPAAAVPAEPPVQEAPVQAAPVPPAPVPP 141

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>SEC16_YEAST (P48415) Multidomain vesicle coat protein|
          Length = 2195

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -1

Query: 172  TSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSS 59
            TS+ P++      +P++ +P  T P P+ + SP++P S
Sbjct: 2110 TSVIPNNPITGEPLPIKTSPSPTGPNPNNSPSPSSPIS 2147

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>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK|
          Length = 1351

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = -1

Query: 199 PARAHSQMPTSMNPSSVAQPLNMPVQL--NPYATSPVPDTAMS-PANP 65
           P   H   P        A+P +MP  +   P AT P PDT  + PA P
Sbjct: 431 PEPTHQPTPVYQPEPIAAEPSHMPPPVIEQPVATEPEPDTEETRPARP 478

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>SYP1_YEAST (P25623) Suppressor of yeast profilin deletion|
          Length = 870

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/55 (25%), Positives = 21/55 (38%)
 Frame = -1

Query: 223 FRPATATSPARAHSQMPTSMNPSSVAQPLNMPVQLNPYATSPVPDTAMSPANPSS 59
           F P+         S  PT+  P S   P  +P+ ++     P   T   P  P+S
Sbjct: 442 FTPSEVPPSTPQQSSPPTAKEPDSSNLPKTVPISISQPPLQPQSKTKPLPVEPAS 496

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>FTF1B_DROME (Q05192) Nuclear hormone receptor FTZ-F1 beta (dHR39)|
          Length = 808

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = -1

Query: 274 GXRRMAKCTHTHALSSKFRPATATSPARAHSQMPTSMNPSSVA---QPLNMPVQLNPYAT 104
           G R   +C++T        P +  SP  +  Q   +   ++VA   QP     QLN +  
Sbjct: 453 GGRSTYQCSYT-------LPNSMLSPLLSPDQAAAAAAAAAVASQQQPHQRLHQLNGFGG 505

Query: 103 SPVPDTAMSPANPS 62
            P+P +   PA+PS
Sbjct: 506 VPIPCSTSLPASPS 519


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,643,782
Number of Sequences: 219361
Number of extensions: 586497
Number of successful extensions: 3066
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 2821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3046
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result