| Clone Name | bags8i05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473222.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 377 bits (190), Expect = e-101 Identities = 472/562 (83%), Gaps = 3/562 (0%) Strand = Plus / Plus Query: 2 gcctgtggtcatgnatgcgcacacagcgatgctcctgggnagcggcaaagctgctgcatg 61 ||||| ||||||| ||| |||||| |||||||||||||| ||| |||||| |||| || Sbjct: 361 gcctgcggtcatg-atgtgcacaccgcgatgctcctggg-agctgcaaagttgcttagtg 418 Query: 62 agcgcaaggnatcagcttaagggaacggtgagactcctttttcaacctgctgaggagggt 121 ||||||||| | ||| | ||||| || |||||||| ||||| |||||||| ||||| ||| Sbjct: 419 agcgcaagg-agcagatcaagggcacagtgagacttcttttccaacctgccgaggaaggt 477 Query: 122 ggtgccggtgcatctcatatggtaaaagaaggtgttctagatggtgttgaggctatattc 181 ||||| ||||||||| | ||| ||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 478 ggtgcgggtgcatcttacatgataaaagatggtgttcttgatggcgttgaagctatattc 537 Query: 182 gccatgcatgtcgattgtcagaagccgacaggctcaatagctgctcacgcaggaccaaca 241 | |||||||| || | || || ||| ||||| |||||| ||||| ||||| || ||| Sbjct: 538 gggatgcatgttgactatcggatgccaacaggtgtaatagcagctcatgcagggcctaca 597 Query: 242 catgcagccgtgtgtttctacgtagtgaaaatagaaggtaaaaccgggaaggctgaaaca 301 || || || || ||||| || | || ||||||||||||||||| || ||||||||||| Sbjct: 598 caagctgctgtatgtttttatgaagcaaaaatagaaggtaaaactggaaaggctgaaact 657 Query: 302 ccacacttgaatgtggatcctgttgctgctgcggcatttaccatcctggccctgcaacag 361 |||||||| |||||||||||| ||| |||||| ||||| |||||| ||||||| ||| Sbjct: 658 ccacacttaaatgtggatcctattgttgctgcatcatttgtcatcctatccctgcagcag 717 Query: 362 ctcacctcgagagaagacgaccctcttcacagccaagtgctctctgttacctatattaaa 421 |||| || |||||||| || |||||||||||||| |||||||| ||||||||| | || Sbjct: 718 ctcatttcaagagaagatgatcctcttcacagccaggtgctctcagttacctatgtcaag 777 Query: 422 gctgggaattctactgataccacacctccagttgttgaattcggaggtactttgaggagc 481 | |||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 778 ggtgggaacactattgatgccacacctccagttattgaattcggaggtactttgaggagc 837 Query: 482 cttactactgaaggactttatcgactagagaaaaggcttaaggaggtagtagaagggcag 541 || ||||||||||| || ||||| ||| |||||||| | |||||||| |||||||||||| Sbjct: 838 ctcactactgaaggtctatatcgtctacagaaaagggtcaaggaggtggtagaagggcag 897 Query: 542 gcagctgtgcatagatgcaagg 563 ||||||||||| |||||||||| Sbjct: 898 gcagctgtgcacagatgcaagg 919
>dbj|AK102934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114I03, full insert sequence Length = 1488 Score = 377 bits (190), Expect = e-101 Identities = 472/562 (83%), Gaps = 3/562 (0%) Strand = Plus / Plus Query: 2 gcctgtggtcatgnatgcgcacacagcgatgctcctgggnagcggcaaagctgctgcatg 61 ||||| ||||||| ||| |||||| |||||||||||||| ||| |||||| |||| || Sbjct: 419 gcctgcggtcatg-atgtgcacaccgcgatgctcctggg-agctgcaaagttgcttagtg 476 Query: 62 agcgcaaggnatcagcttaagggaacggtgagactcctttttcaacctgctgaggagggt 121 ||||||||| | ||| | ||||| || |||||||| ||||| |||||||| ||||| ||| Sbjct: 477 agcgcaagg-agcagatcaagggcacagtgagacttcttttccaacctgccgaggaaggt 535 Query: 122 ggtgccggtgcatctcatatggtaaaagaaggtgttctagatggtgttgaggctatattc 181 ||||| ||||||||| | ||| ||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 536 ggtgcgggtgcatcttacatgataaaagatggtgttcttgatggcgttgaagctatattc 595 Query: 182 gccatgcatgtcgattgtcagaagccgacaggctcaatagctgctcacgcaggaccaaca 241 | |||||||| || | || || ||| ||||| |||||| ||||| ||||| || ||| Sbjct: 596 gggatgcatgttgactatcggatgccaacaggtgtaatagcagctcatgcagggcctaca 655 Query: 242 catgcagccgtgtgtttctacgtagtgaaaatagaaggtaaaaccgggaaggctgaaaca 301 || || || || ||||| || | || ||||||||||||||||| || ||||||||||| Sbjct: 656 caagctgctgtatgtttttatgaagcaaaaatagaaggtaaaactggaaaggctgaaact 715 Query: 302 ccacacttgaatgtggatcctgttgctgctgcggcatttaccatcctggccctgcaacag 361 |||||||| |||||||||||| ||| |||||| ||||| |||||| ||||||| ||| Sbjct: 716 ccacacttaaatgtggatcctattgttgctgcatcatttgtcatcctatccctgcagcag 775 Query: 362 ctcacctcgagagaagacgaccctcttcacagccaagtgctctctgttacctatattaaa 421 |||| || |||||||| || |||||||||||||| |||||||| ||||||||| | || Sbjct: 776 ctcatttcaagagaagatgatcctcttcacagccaggtgctctcagttacctatgtcaag 835 Query: 422 gctgggaattctactgataccacacctccagttgttgaattcggaggtactttgaggagc 481 | |||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 836 ggtgggaacactattgatgccacacctccagttattgaattcggaggtactttgaggagc 895 Query: 482 cttactactgaaggactttatcgactagagaaaaggcttaaggaggtagtagaagggcag 541 || ||||||||||| || ||||| ||| |||||||| | |||||||| |||||||||||| Sbjct: 896 ctcactactgaaggtctatatcgtctacagaaaagggtcaaggaggtggtagaagggcag 955 Query: 542 gcagctgtgcatagatgcaagg 563 ||||||||||| |||||||||| Sbjct: 956 gcagctgtgcacagatgcaagg 977
>dbj|AK061536.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F08, full insert sequence Length = 1464 Score = 377 bits (190), Expect = e-101 Identities = 472/562 (83%), Gaps = 3/562 (0%) Strand = Plus / Plus Query: 2 gcctgtggtcatgnatgcgcacacagcgatgctcctgggnagcggcaaagctgctgcatg 61 ||||| ||||||| ||| |||||| |||||||||||||| ||| |||||| |||| || Sbjct: 395 gcctgcggtcatg-atgtgcacaccgcgatgctcctggg-agctgcaaagttgcttagtg 452 Query: 62 agcgcaaggnatcagcttaagggaacggtgagactcctttttcaacctgctgaggagggt 121 ||||||||| | ||| | ||||| || |||||||| ||||| |||||||| ||||| ||| Sbjct: 453 agcgcaagg-agcagatcaagggcacagtgagacttcttttccaacctgccgaggaaggt 511 Query: 122 ggtgccggtgcatctcatatggtaaaagaaggtgttctagatggtgttgaggctatattc 181 ||||| ||||||||| | ||| ||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 512 ggtgcgggtgcatcttacatgataaaagatggtgttcttgatggcgttgaagctatattc 571 Query: 182 gccatgcatgtcgattgtcagaagccgacaggctcaatagctgctcacgcaggaccaaca 241 | |||||||| || | || || ||| ||||| |||||| ||||| ||||| || ||| Sbjct: 572 gggatgcatgttgactatcggatgccaacaggtgtaatagcagctcatgcagggcctaca 631 Query: 242 catgcagccgtgtgtttctacgtagtgaaaatagaaggtaaaaccgggaaggctgaaaca 301 || || || || ||||| || | || ||||||||||||||||| || ||||||||||| Sbjct: 632 caagctgctgtatgtttttatgaagcaaaaatagaaggtaaaactggaaaggctgaaact 691 Query: 302 ccacacttgaatgtggatcctgttgctgctgcggcatttaccatcctggccctgcaacag 361 |||||||| |||||||||||| ||| |||||| ||||| |||||| ||||||| ||| Sbjct: 692 ccacacttaaatgtggatcctattgttgctgcatcatttgtcatcctatccctgcagcag 751 Query: 362 ctcacctcgagagaagacgaccctcttcacagccaagtgctctctgttacctatattaaa 421 |||| || |||||||| || |||||||||||||| |||||||| ||||||||| | || Sbjct: 752 ctcatttcaagagaagatgatcctcttcacagccaggtgctctcagttacctatgtcaag 811 Query: 422 gctgggaattctactgataccacacctccagttgttgaattcggaggtactttgaggagc 481 | |||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 812 ggtgggaacactattgatgccacacctccagttattgaattcggaggtactttgaggagc 871 Query: 482 cttactactgaaggactttatcgactagagaaaaggcttaaggaggtagtagaagggcag 541 || ||||||||||| || ||||| ||| |||||||| | |||||||| |||||||||||| Sbjct: 872 ctcactactgaaggtctatatcgtctacagaaaagggtcaaggaggtggtagaagggcag 931 Query: 542 gcagctgtgcatagatgcaagg 563 ||||||||||| |||||||||| Sbjct: 932 gcagctgtgcacagatgcaagg 953
>dbj|AK103369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126P16, full insert sequence Length = 816 Score = 226 bits (114), Expect = 6e-56 Identities = 342/414 (82%), Gaps = 3/414 (0%) Strand = Plus / Plus Query: 2 gcctgtggtcatgnatgcgcacacagcgatgctcctgggnagcggcaaagctgctgcatg 61 ||||| ||||||| ||| |||||| |||||||||||||| ||| |||||| |||| || Sbjct: 394 gcctgcggtcatg-atgtgcacaccgcgatgctcctggg-agctgcaaagttgcttagtg 451 Query: 62 agcgcaaggnatcagcttaagggaacggtgagactcctttttcaacctgctgaggagggt 121 ||||||||| | ||| | ||||| || |||||||| ||||| |||||||| ||||| ||| Sbjct: 452 agcgcaagg-agcagatcaagggcacagtgagacttcttttccaacctgccgaggaaggt 510 Query: 122 ggtgccggtgcatctcatatggtaaaagaaggtgttctagatggtgttgaggctatattc 181 ||||| ||||||||| | ||| ||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 511 ggtgcgggtgcatcttacatgataaaagatggtgttcttgatggcgttgaagctatattc 570 Query: 182 gccatgcatgtcgattgtcagaagccgacaggctcaatagctgctcacgcaggaccaaca 241 | |||||||| || | || || ||| ||||| |||||| ||||| ||||| || ||| Sbjct: 571 gggatgcatgttgactatcggatgccaacaggtgtaatagcagctcatgcagggcctaca 630 Query: 242 catgcagccgtgtgtttctacgtagtgaaaatagaaggtaaaaccgggaaggctgaaaca 301 || || || || ||||| || | || ||||||||||||||||| || ||||||||||| Sbjct: 631 caagctgctgtatgtttttatgaagcaaaaatagaaggtaaaactggaaaggctgaaact 690 Query: 302 ccacacttgaatgtggatcctgttgctgctgcggcatttaccatcctggccctgcaacag 361 |||||||| |||||||||||| ||| |||||| ||||| |||||| ||||||| ||| Sbjct: 691 ccacacttaaatgtggatcctattgttgctgcatcatttgtcatcctatccctgcagcag 750 Query: 362 ctcacctcgagagaagacgaccctcttcacagccaagtgctctctgttacctat 415 |||| || |||||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 751 ctcatttcaagagaagatgatcctcttcacagccaggtgctctcagttacctat 804
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 184 bits (93), Expect = 2e-43 Identities = 261/317 (82%) Strand = Plus / Plus Query: 80 aagggaacggtgagactcctttttcaacctgctgaggagggtggtgccggtgcatctcat 139 ||||| || |||||||| ||||| |||||||| ||||| |||||||| ||||||||| | Sbjct: 26089297 aagggcacagtgagacttcttttccaacctgccgaggaaggtggtgcgggtgcatcttac 26089356 Query: 140 atggtaaaagaaggtgttctagatggtgttgaggctatattcgccatgcatgtcgattgt 199 ||| ||||||| |||||||| ||||| ||||| |||||||||| |||||||| || | | Sbjct: 26089357 atgataaaagatggtgttcttgatggcgttgaagctatattcgggatgcatgttgactat 26089416 Query: 200 cagaagccgacaggctcaatagctgctcacgcaggaccaacacatgcagccgtgtgtttc 259 | || ||| ||||| |||||| ||||| ||||| || ||||| || || || ||||| Sbjct: 26089417 cggatgccaacaggtgtaatagcagctcatgcagggcctacacaagctgctgtatgtttt 26089476 Query: 260 tacgtagtgaaaatagaaggtaaaaccgggaaggctgaaacaccacacttgaatgtggat 319 || | || ||||||||||||||||| || ||||||||||| |||||||| ||||||||| Sbjct: 26089477 tatgaagcaaaaatagaaggtaaaactggaaaggctgaaactccacacttaaatgtggat 26089536 Query: 320 cctgttgctgctgcggcatttaccatcctggccctgcaacagctcacctcgagagaagac 379 ||| ||| |||||| ||||| |||||| ||||||| ||||||| || |||||||| Sbjct: 26089537 cctattgttgctgcatcatttgtcatcctatccctgcagcagctcatttcaagagaagat 26089596 Query: 380 gaccctcttcacagcca 396 || |||||||||||||| Sbjct: 26089597 gatcctcttcacagcca 26089613 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 398 gtgctctctgttacctatattaaagctgggaattctactgataccacacctccagttgtt 457 |||||||| ||||||||| | || | |||||| ||| |||| |||||||||||||| || Sbjct: 26090635 gtgctctcagttacctatgtcaagggtgggaacactattgatgccacacctccagttatt 26090694 Query: 458 gaattcggaggtactttgaggagccttactactgaaggactttatcgactagagaaaagg 517 |||||||||||||||||||||||||| ||||||||||| || ||||| ||| |||||||| Sbjct: 26090695 gaattcggaggtactttgaggagcctcactactgaaggtctatatcgtctacagaaaagg 26090754 Query: 518 cttaaggaggt 528 | |||||||| Sbjct: 26090755 gtcaaggaggt 26090765 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 525 aggtagtagaagggcaggcagctgtgcatagatgcaagg 563 |||| ||||||||||||||||||||||| |||||||||| Sbjct: 26091170 aggtggtagaagggcaggcagctgtgcacagatgcaagg 26091208 Score = 42.1 bits (21), Expect = 1.9 Identities = 59/69 (85%), Gaps = 2/69 (2%) Strand = Plus / Plus Query: 2 gcctgtggtcatgnatgcgcacacagcgatgctcctgggnagcggcaaagctgctgcatg 61 ||||| ||||||| ||| |||||| |||||||||||||| ||| |||||| |||| || Sbjct: 26088854 gcctgcggtcatg-atgtgcacaccgcgatgctcctggg-agctgcaaagttgcttagtg 26088911 Query: 62 agcgcaagg 70 ||||||||| Sbjct: 26088912 agcgcaagg 26088920
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 184 bits (93), Expect = 2e-43 Identities = 261/317 (82%) Strand = Plus / Plus Query: 80 aagggaacggtgagactcctttttcaacctgctgaggagggtggtgccggtgcatctcat 139 ||||| || |||||||| ||||| |||||||| ||||| |||||||| ||||||||| | Sbjct: 123624 aagggcacagtgagacttcttttccaacctgccgaggaaggtggtgcgggtgcatcttac 123683 Query: 140 atggtaaaagaaggtgttctagatggtgttgaggctatattcgccatgcatgtcgattgt 199 ||| ||||||| |||||||| ||||| ||||| |||||||||| |||||||| || | | Sbjct: 123684 atgataaaagatggtgttcttgatggcgttgaagctatattcgggatgcatgttgactat 123743 Query: 200 cagaagccgacaggctcaatagctgctcacgcaggaccaacacatgcagccgtgtgtttc 259 | || ||| ||||| |||||| ||||| ||||| || ||||| || || || ||||| Sbjct: 123744 cggatgccaacaggtgtaatagcagctcatgcagggcctacacaagctgctgtatgtttt 123803 Query: 260 tacgtagtgaaaatagaaggtaaaaccgggaaggctgaaacaccacacttgaatgtggat 319 || | || ||||||||||||||||| || ||||||||||| |||||||| ||||||||| Sbjct: 123804 tatgaagcaaaaatagaaggtaaaactggaaaggctgaaactccacacttaaatgtggat 123863 Query: 320 cctgttgctgctgcggcatttaccatcctggccctgcaacagctcacctcgagagaagac 379 ||| ||| |||||| ||||| |||||| ||||||| ||||||| || |||||||| Sbjct: 123864 cctattgttgctgcatcatttgtcatcctatccctgcagcagctcatttcaagagaagat 123923 Query: 380 gaccctcttcacagcca 396 || |||||||||||||| Sbjct: 123924 gatcctcttcacagcca 123940 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 398 gtgctctctgttacctatattaaagctgggaattctactgataccacacctccagttgtt 457 |||||||| ||||||||| | || | |||||| ||| |||| |||||||||||||| || Sbjct: 124962 gtgctctcagttacctatgtcaagggtgggaacactattgatgccacacctccagttatt 125021 Query: 458 gaattcggaggtactttgaggagccttactactgaaggactttatcgactagagaaaagg 517 |||||||||||||||||||||||||| ||||||||||| || ||||| ||| |||||||| Sbjct: 125022 gaattcggaggtactttgaggagcctcactactgaaggtctatatcgtctacagaaaagg 125081 Query: 518 cttaaggaggt 528 | |||||||| Sbjct: 125082 gtcaaggaggt 125092 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 525 aggtagtagaagggcaggcagctgtgcatagatgcaagg 563 |||| ||||||||||||||||||||||| |||||||||| Sbjct: 125497 aggtggtagaagggcaggcagctgtgcacagatgcaagg 125535 Score = 42.1 bits (21), Expect = 1.9 Identities = 59/69 (85%), Gaps = 2/69 (2%) Strand = Plus / Plus Query: 2 gcctgtggtcatgnatgcgcacacagcgatgctcctgggnagcggcaaagctgctgcatg 61 ||||| ||||||| ||| |||||| |||||||||||||| ||| |||||| |||| || Sbjct: 123181 gcctgcggtcatg-atgtgcacaccgcgatgctcctggg-agctgcaaagttgcttagtg 123238 Query: 62 agcgcaagg 70 ||||||||| Sbjct: 123239 agcgcaagg 123247
>emb|AJ744953.1| Populus alba x Populus tremula mRNA for putative auxin-amidohydrolase precursor (Ill3 gene) Length = 1508 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 76 gcttaagggaacggtgagactcctttttcaacctgctgaggagggtggtgccggtgcatc 135 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 574 gcttaagggaacggtgagacttcttttccaacctgctgaggagggtggtgctggtgcatc 633 Query: 136 tcatatggtaaaagaaggtg 155 |||||| ||||||| |||| Sbjct: 634 acatatgataaaagatggtg 653
>emb|AJ744952.1| Populus euphratica mRNA for putative auxin-amidohydrolase precursor (Ill3 gene) Length = 1462 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 76 gcttaagggaacggtgagactcctttttcaacctgctgaggagggtggtgccggtgcatc 135 ||||||||||||||||||||| ||||| |||||||||||||| || ||||| |||||||| Sbjct: 538 gcttaagggaacggtgagacttcttttccaacctgctgaggaaggaggtgctggtgcatc 597 Query: 136 tcatatggtaaaaga 150 |||||| ||||||| Sbjct: 598 acatatgataaaaga 612
>dbj|AB013387.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18G13 Length = 31309 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 81 agggaacggtgagactcctttttcaacctgctgaggagggtggtgccggtgcatctcata 140 ||||||| ||||| || ||||||||||| || || || |||||||| ||||| | ||||| Sbjct: 658 agggaacagtgaggcttctttttcaaccagcagaagaaggtggtgcaggtgcttttcata 717 Query: 141 tggtaaaagaaggtg 155 || |||||||||||| Sbjct: 718 tgataaaagaaggtg 732
>gb|AF081066.1|AF081066 Arabidopsis thaliana IAA-amino acid hydrolase homolog ILL3 (ILL3) gene, complete cds Length = 2169 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 81 agggaacggtgagactcctttttcaacctgctgaggagggtggtgccggtgcatctcata 140 ||||||| ||||| || ||||||||||| || || || |||||||| ||||| | ||||| Sbjct: 823 agggaacagtgaggcttctttttcaaccagcagaagaaggtggtgcaggtgcttttcata 882 Query: 141 tggtaaaagaaggtg 155 || |||||||||||| Sbjct: 883 tgataaaagaaggtg 897
>ref|NM_124794.2| Arabidopsis thaliana ILL3; metallopeptidase AT5G54140 (ILL3) mRNA, complete cds Length = 1514 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 83 ggaacggtgagactcctttttcaacctgctgaggagggtggtgccggtgcatctcatatg 142 ||||| ||||| || ||||||||||| || || || |||||||| ||||| | ||||||| Sbjct: 454 ggaacagtgaggcttctttttcaaccagcagaagaaggtggtgcaggtgcttttcatatg 513 Query: 143 gtaaaagaaggtg 155 |||||||||||| Sbjct: 514 ataaaagaaggtg 526
>gb|AC119415.13| Medicago truncatula clone mth2-27n2, complete sequence Length = 139330 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 80 aagggaacggtgagactcctttttcaacctgctgaggaggg 120 |||||||| |||||||| ||||| ||||||||||||||||| Sbjct: 66846 aagggaactgtgagacttcttttccaacctgctgaggaggg 66806 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 80 aagggaacggtgagactcctttttcaacctgctgag 115 |||||||| |||||||| ||||| |||||||||||| Sbjct: 71903 aagggaactgtgagacttcttttccaacctgctgag 71868 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 84 gaacggtgagactcctttttcaacctgctgag 115 |||| |||||||| ||||| |||||||||||| Sbjct: 71764 gaactgtgagacttcttttccaacctgctgag 71733
>gb|AC126789.20| Medicago truncatula clone mth2-36n23, complete sequence Length = 126875 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 80 aagggaacggtgagactcctttttcaacctgctgaggaggg 120 |||||||| |||||||| ||||| ||||||||||||||||| Sbjct: 21006 aagggaactgtgagacttcttttccaacctgctgaggaggg 20966 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 80 aagggaacggtgagactcctttttcaacctgctgag 115 |||||||| |||||||| ||||| |||||||||||| Sbjct: 26063 aagggaactgtgagacttcttttccaacctgctgag 26028 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 84 gaacggtgagactcctttttcaacctgctgag 115 |||| |||||||| ||||| |||||||||||| Sbjct: 25924 gaactgtgagacttcttttccaacctgctgag 25893
>dbj|AP006123.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT41E18, TM0207, complete sequence Length = 115290 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 80 aagggaacggtgagactcctttttcaacctgctgaggaggg 120 |||||||| |||||||| |||||||||| ||||||||||| Sbjct: 51902 aagggaactgtgagacttatttttcaaccagctgaggaggg 51862
>ref|XM_322213.1| Neurospora crassa OR74A predicted protein (NCU00128.1) partial mRNA Length = 3045 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 tggatcctgttgctgctgcgg 335 ||||||||||||||||||||| Sbjct: 2904 tggatcctgttgctgctgcgg 2884
>ref|XM_951088.1| Neurospora crassa OR74A hypothetical protein (NCU00128.1) partial mRNA Length = 3045 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 tggatcctgttgctgctgcgg 335 ||||||||||||||||||||| Sbjct: 2904 tggatcctgttgctgctgcgg 2884
>gb|AC150401.3| Branchiostoma floridae clone CH302-30M10, complete sequence Length = 138773 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 agatggtgttgaggctatat 179 |||||||||||||||||||| Sbjct: 40550 agatggtgttgaggctatat 40531
>ref|XM_958922.1| Neurospora crassa OR74A hypothetical protein (NCU02059.1) partial mRNA Length = 1518 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 tgaggagggtggtgccggtg 131 |||||||||||||||||||| Sbjct: 1033 tgaggagggtggtgccggtg 1014
>ref|XM_329248.1| Neurospora crassa OR74A hypothetical protein (NCU02059.1) partial mRNA Length = 1518 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 tgaggagggtggtgccggtg 131 |||||||||||||||||||| Sbjct: 1033 tgaggagggtggtgccggtg 1014
>gb|BT013883.1| Lycopersicon esculentum clone 132864F, mRNA sequence Length = 1514 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 524 gaggtagtagaagggcaggcagctgtgcatag 555 |||||| | ||||| ||||||||||||||||| Sbjct: 972 gaggtaattgaaggacaggcagctgtgcatag 1003
>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence Length = 247655 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 tgaatgtggatcctgttgct 328 |||||||||||||||||||| Sbjct: 43889 tgaatgtggatcctgttgct 43908
>gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome 19, complete sequence Length = 246177 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 tgaatgtggatcctgttgct 328 |||||||||||||||||||| Sbjct: 104096 tgaatgtggatcctgttgct 104115
>ref|XM_799227.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053413293.9) partial mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tgctgaggagggtggtgccg 128 |||||||||||||||||||| Sbjct: 618 tgctgaggagggtggtgccg 637
>gb|AC122856.3| Mus musculus BAC clone RP23-121N19 from 3, complete sequence Length = 187311 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 aaaagaaggtgttctagatg 164 |||||||||||||||||||| Sbjct: 140958 aaaagaaggtgttctagatg 140939
>gb|AC099535.2| Homo sapiens chromosome 3 clone RP11-2G22, complete sequence Length = 181720 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 tctctgttacctatattaaa 421 |||||||||||||||||||| Sbjct: 120867 tctctgttacctatattaaa 120848
>gb|AC104574.4| Homo sapiens chromosome 15, clone RP11-259A24, complete sequence Length = 152130 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 agagaaaaggcttaaggagg 527 |||||||||||||||||||| Sbjct: 147498 agagaaaaggcttaaggagg 147517
>gb|AC021542.8| Homo sapiens chromosome 15, clone RP11-507B12, complete sequence Length = 80114 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 agagaaaaggcttaaggagg 527 |||||||||||||||||||| Sbjct: 23647 agagaaaaggcttaaggagg 23628
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 atcctgttgctgctgcggca 337 |||||||||||||||||||| Sbjct: 2911396 atcctgttgctgctgcggca 2911415
>gb|BC083608.1| Rattus norvegicus BCL2-associated athanogene 4, mRNA (cDNA clone MGC:94364 IMAGE:7133487), complete cds Length = 2266 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 ttaccatcctggccctgcaacagc 362 ||||| |||||||||||||||||| Sbjct: 730 ttaccctcctggccctgcaacagc 753
>gb|AC087378.6| Homo sapiens chromosome 11, clone RP11-375L11, complete sequence Length = 166379 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 accatcctggccctgcaaca 360 |||||||||||||||||||| Sbjct: 111226 accatcctggccctgcaaca 111207
>gb|AC104947.3| Homo sapiens chromosome 11, clone RP11-1029L14, complete sequence Length = 186823 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 accatcctggccctgcaaca 360 |||||||||||||||||||| Sbjct: 10698 accatcctggccctgcaaca 10717
>gb|AC090333.5| Homo sapiens chromosome 18, clone RP11-843P6, complete sequence Length = 165344 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 tagtgaaaatagaaggtaaa 283 |||||||||||||||||||| Sbjct: 117393 tagtgaaaatagaaggtaaa 117374
>gb|AC103870.3| Homo sapiens chromosome 11, clone RP11-702L21, complete sequence Length = 182598 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 accatcctggccctgcaaca 360 |||||||||||||||||||| Sbjct: 163184 accatcctggccctgcaaca 163203
>gb|AC009854.9| Homo sapiens chromosome 18, clone RP11-333A13, complete sequence Length = 207293 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tagtgaaaatagaaggtaaa 283 |||||||||||||||||||| Sbjct: 1174 tagtgaaaatagaaggtaaa 1193
>ref|NM_001025130.1| Rattus norvegicus BCL2-associated athanogene 4 (Bag4), mRNA Length = 2266 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 ttaccatcctggccctgcaacagc 362 ||||| |||||||||||||||||| Sbjct: 730 ttaccctcctggccctgcaacagc 753
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ctttttcaacctgctgagga 117 |||||||||||||||||||| Sbjct: 1243731 ctttttcaacctgctgagga 1243712
>gb|AC137675.2| Homo sapiens chromosome 3 clone RP11-358O21, complete sequence Length = 163004 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 tctctgttacctatattaaa 421 |||||||||||||||||||| Sbjct: 40376 tctctgttacctatattaaa 40357
>emb|CR962128.2| Medicago truncatula chromosome 5 clone mth2-2o11, COMPLETE SEQUENCE Length = 136557 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tgcatctcatatggtaaaag 149 |||||||||||||||||||| Sbjct: 102597 tgcatctcatatggtaaaag 102578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,495,926 Number of Sequences: 3902068 Number of extensions: 4495926 Number of successful extensions: 76221 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76048 Number of HSP's gapped (non-prelim): 169 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)