>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                 
Query: 137   tgttttgcagactactagagttaggttcgtctttgatgatgatgccctggtt 188
             |||||||||||||||||||||  | || ||||| |||||||| |||||||||
Sbjct: 70156 tgttttgcagactactagagtacgatttgtcttcgatgatgaggccctggtt 70105

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                    
Query: 137      tgttttgcagactactagagttaggttcgtctttgatgatgatgccctggtt 188
                |||||||||||||||||||||  | || ||||| |||||||| |||||||||
Sbjct: 19366807 tgttttgcagactactagagtacgatttgtcttcgatgatgaggccctggtt 19366756

>gb|AC123068.4| Mus musculus BAC clone RP23-21P10 from 1, complete sequence
          Length = 221464

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 85    ttcttaggtatgatttatttct 106
             ||||||||||||||||||||||
Sbjct: 45561 ttcttaggtatgatttatttct 45540

>gb|AC140321.3| Mus musculus BAC clone RP23-402K6 from 1, complete sequence
          Length = 215225

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 85     ttcttaggtatgatttatttct 106
              ||||||||||||||||||||||
Sbjct: 204573 ttcttaggtatgatttatttct 204552

>emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, complete sequence
          Length = 185618

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 94    atgatttatttctatgttcatgctgaaac 122
             |||||||||||||||| |||||| |||||
Sbjct: 86004 atgatttatttctatgatcatgcagaaac 86032

>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7,
              complete sequence
          Length = 170614

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 232    ttcaaactacttatgtaaata 252
              |||||||||||||||||||||
Sbjct: 129363 ttcaaactacttatgtaaata 129343

>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
          Length = 366120

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 261  aactggctgcttaattatatt 281
            |||||||||||||||||||||
Sbjct: 6410 aactggctgcttaattatatt 6430

>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 261  aactggctgcttaattatatt 281
            |||||||||||||||||||||
Sbjct: 9083 aactggctgcttaattatatt 9103

>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete
             sequence
          Length = 157397

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   ctgcttaattatatttaagc 286
             ||||||||||||||||||||
Sbjct: 67675 ctgcttaattatatttaagc 67694

>gb|AC101852.7| Mus musculus chromosome 1, clone RP23-279P3, complete sequence
          Length = 185975

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   tatttcaaactacttatgta 248
             ||||||||||||||||||||
Sbjct: 33637 tatttcaaactacttatgta 33618

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 267      ctgcttaattatatttaagc 286
                ||||||||||||||||||||
Sbjct: 22600471 ctgcttaattatatttaagc 22600452

>emb|AL136125.5| Human DNA sequence from clone RP1-304B14 on chromosome 6 Contains the
             3' end of the C6orf33 gene for chromosome 6 open reading
             frame 33 (LMPB1 FLJ32521), a novel FLJ10466 containing
             gene, a novel gene and a CpG island, complete sequence
          Length = 83714

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ctgtcagcatttgcttatca 20
             ||||||||||||||||||||
Sbjct: 58549 ctgtcagcatttgcttatca 58568

>gb|AC158962.4| Mus musculus chromosome 1, clone RP23-443N21, complete sequence
          Length = 180337

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    tatttcaaactacttatgta 248
              ||||||||||||||||||||
Sbjct: 126148 tatttcaaactacttatgta 126167

>emb|BX890550.10| Zebrafish DNA sequence from clone DKEYP-110B6 in linkage group 13,
              complete sequence
          Length = 174313

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    tttcaaactacttatgtaaa 250
              ||||||||||||||||||||
Sbjct: 110709 tttcaaactacttatgtaaa 110690

>emb|CR377210.7| Zebrafish DNA sequence from clone CH211-195C22 in linkage group 5,
             complete sequence
          Length = 170134

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   tttcaaactacttatgtaaa 250
             ||||||||||||||||||||
Sbjct: 21595 tttcaaactacttatgtaaa 21614

>emb|BX571845.5| Zebrafish DNA sequence from clone DKEY-18P12 in linkage group 9, complete
              sequence
          Length = 131458

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    tttcaaactacttatgtaaa 250
              ||||||||||||||||||||
Sbjct: 117927 tttcaaactacttatgtaaa 117946

>emb|BX324190.13| Zebrafish DNA sequence from clone CH211-220I18 in linkage group 23,
              complete sequence
          Length = 217060

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    tatgtaaatatcttccaaaa 262
              ||||||||||||||||||||
Sbjct: 174163 tatgtaaatatcttccaaaa 174182

>gb|AC008629.7| Homo sapiens chromosome 5 clone CTB-161M19, complete sequence
          Length = 151881

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    atactgataaatcagagaaa 66
             ||||||||||||||||||||
Sbjct: 29511 atactgataaatcagagaaa 29492

>emb|BX571979.8| Zebrafish DNA sequence from clone DKEYP-51C11 in linkage group 13,
              complete sequence
          Length = 165275

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    ttcaaactacttatgtaaat 251
              ||||||||||||||||||||
Sbjct: 146863 ttcaaactacttatgtaaat 146882

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 267      ctgcttaattatatttaagc 286
                ||||||||||||||||||||
Sbjct: 22593500 ctgcttaattatatttaagc 22593481

>ref|XM_395814.2| PREDICTED: Apis mellifera similar to polyubiquitin (LOC412353),
          mRNA
          Length = 2330

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 43 aatgatactgataaatcagagaaa 66
          ||||||||||||||||| ||||||
Sbjct: 33 aatgatactgataaatccgagaaa 10

>ref|XM_395993.2| PREDICTED: Apis mellifera similar to ribosomal Protein, Large
          subunit, ubiquitin (94.0 kD) (ubq-1) (LOC412353), mRNA
          Length = 1402

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 43 aatgatactgataaatcagagaaa 66
          ||||||||||||||||| ||||||
Sbjct: 33 aatgatactgataaatccgagaaa 10

>gb|AC096651.1| Homo sapiens BAC clone RP11-16J15 from 4, complete sequence
          Length = 158661

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ggcaatgatactgataaatc 59
             ||||||||||||||||||||
Sbjct: 53341 ggcaatgatactgataaatc 53360

>gb|AC095040.3| Homo sapiens BAC clone RP11-18M17 from 4, complete sequence
          Length = 90171

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    atttatttctatgttcatgc 116
             ||||||||||||||||||||
Sbjct: 31594 atttatttctatgttcatgc 31575

>gb|AC177808.2| Pan troglodytes BAC clone CH251-703A9 from chromosome unknown, complete
              sequence
          Length = 207792

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     atttatttctatgttcatgc 116
              ||||||||||||||||||||
Sbjct: 106521 atttatttctatgttcatgc 106502

>emb|BX679670.2| Zebrafish DNA sequence from clone CH211-286D16 in linkage group 5,
              complete sequence
          Length = 150298

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    tttcaaactacttatgtaaa 250
              ||||||||||||||||||||
Sbjct: 100321 tttcaaactacttatgtaaa 100340

>emb|BX957260.10| Zebrafish DNA sequence from clone DKEY-1N7 in linkage group 19, complete
              sequence
          Length = 188873

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    tttcaaactacttatgtaaa 250
              ||||||||||||||||||||
Sbjct: 153663 tttcaaactacttatgtaaa 153682

>emb|BX649384.6| Zebrafish DNA sequence from clone CH211-199G17 in linkage group 19,
              complete sequence
          Length = 190998

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    ttcaaactacttatgtaaat 251
              ||||||||||||||||||||
Sbjct: 115066 ttcaaactacttatgtaaat 115085

>emb|AL935333.9| Zebrafish DNA sequence from clone CH211-198I18 in linkage group 5,
              complete sequence
          Length = 199019

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    ttcaaactacttatgtaaat 251
              ||||||||||||||||||||
Sbjct: 100008 ttcaaactacttatgtaaat 100027

>gb|AC147444.4| Gallus gallus BAC clone CH261-16A3 from chromosome unknown, complete
              sequence
          Length = 242861

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    ttcactttgttttgcagact 149
              ||||||||||||||||||||
Sbjct: 110222 ttcactttgttttgcagact 110241

>emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 in linkage group 3,
             complete sequence
          Length = 159132

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   tttcaaactacttatgtaaa 250
             ||||||||||||||||||||
Sbjct: 23095 tttcaaactacttatgtaaa 23114

>gb|AC165414.9| Mus musculus chromosome 8, clone RP23-424A21, complete sequence
          Length = 192707

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                             
Query: 84    tttcttaggtatgatttatttctatgttcatg 115
             |||||||||||| |||||||| ||||||||||
Sbjct: 28665 tttcttaggtattatttattt-tatgttcatg 28695


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,874,181
Number of Sequences: 3902068
Number of extensions: 3874181
Number of successful extensions: 77484
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 77357
Number of HSP's gapped (non-prelim): 128
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)