ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8h08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 730 Score = 375 bits (189), Expect = e-100 Identities = 314/353 (88%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||| | Sbjct: 163 actgctctgcagcttgtgatgaag-aagtcaagtgctcatg-atgggcttgtgaagggtc 220 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| ||||| || || || |||||||||||||||||| | |||||||||||||||| Sbjct: 221 tccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgagg 280 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | |||||||| ||||||||||| ||| | || ||||| || ||||||||||||||||||| Sbjct: 281 actgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttc 340 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || | || |||||||||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 341 accttgttaccgtgcctagtgctaagactcttggcgagtgggcagggctttgcaagattg 400 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 ||||||||||||||||||| ||||| ||||||||||| || |||||||| |||||||||| Sbjct: 401 actctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgttgtcaaggactatg 460 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 ||||||| || ||||| ||| |||| |||||||| || ||||| ||||||||| Sbjct: 461 gtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcactag 513
>dbj|AK121635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C16, full insert sequence Length = 734 Score = 375 bits (189), Expect = e-100 Identities = 314/353 (88%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||| | Sbjct: 167 actgctctgcagcttgtgatgaag-aagtcaagtgctcatg-atgggcttgtgaagggtc 224 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| ||||| || || || |||||||||||||||||| | |||||||||||||||| Sbjct: 225 tccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgagg 284 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | |||||||| ||||||||||| ||| | || ||||| || ||||||||||||||||||| Sbjct: 285 actgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttc 344 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || | || |||||||||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 345 accttgttaccgtgcctagtgctaagactcttggcgagtgggcagggctttgcaagattg 404 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 ||||||||||||||||||| ||||| ||||||||||| || |||||||| |||||||||| Sbjct: 405 actctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgttgtcaaggactatg 464 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 ||||||| || ||||| ||| |||| |||||||| || ||||| ||||||||| Sbjct: 465 gtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcactag 517
>dbj|AK058680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A01, full insert sequence Length = 730 Score = 375 bits (189), Expect = e-100 Identities = 314/353 (88%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||| | Sbjct: 163 actgctctgcagcttgtgatgaag-aagtcaagtgctcatg-atgggcttgtgaagggtc 220 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| ||||| || || || |||||||||||||||||| | |||||||||||||||| Sbjct: 221 tccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgagg 280 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | |||||||| ||||||||||| ||| | || ||||| || ||||||||||||||||||| Sbjct: 281 actgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttc 340 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || | || |||||||||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 341 accttgttaccgtgcctagtgctaagactcttggcgagtgggcagggctttgcaagattg 400 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 ||||||||||||||||||| ||||| ||||||||||| || |||||||| |||||||||| Sbjct: 401 actctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgttgtcaaggactatg 460 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 ||||||| || ||||| ||| |||| |||||||| || ||||| ||||||||| Sbjct: 461 gtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcactag 513
>gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 Score = 313 bits (158), Expect = 3e-82 Identities = 301/346 (86%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||| |||||||| |||||| |||||||||||||||| |||||||||| ||||| | Sbjct: 180 actgctctacagcttgtcatgaag-aagtcaagtgctcatg-atggccttgtgaaggggc 237 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| ||||| || | ||||||||||||||||||||| | |||||||| ||||||| Sbjct: 238 tccgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgagg 297 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 |||| |||||||||||||| ||||||||||| |||||||| || ||||||||||| |||| Sbjct: 298 attgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttc 357 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || |||| || ||||| ||||| |||||||| || |||||||| |||||||||||||| | Sbjct: 358 acctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcg 417 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 || |||||||||||||||| ||||| || |||||||| || | ||||| |||||||||| Sbjct: 418 acactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatg 477 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtc 346 ||||||| || ||||| ||| ||||||||||| | || |||||||| Sbjct: 478 gtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 523
>ref|XM_477173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 751 Score = 303 bits (153), Expect = 3e-79 Identities = 305/353 (86%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||| ||||||| |||| || || ||||| | Sbjct: 186 actgctctgcagcttgtgatgaag-aagtcaagcgctcatg-atgggctcgtgaaggggc 243 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| || || || || |||||||||||||| |||||| | || ||||||||||||| Sbjct: 244 tccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgagg 303 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | || ||||||||||||||||| ||| | |||||||||||||| ||||||||||| |||| Sbjct: 304 actgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttc 363 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || | || |||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 364 acctcgttaccgtgcctagtgctaaaactcttggcgagtgggcagggctttgcaagattg 423 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 | |||||||||||||| || ||||| || |||||||| || |||||||| ||||||| | Sbjct: 424 attctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgttgtcaaggacttcg 483 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 ||||||| || ||||| || |||| || ||||| || |||||||| |||||| Sbjct: 484 gtgaagagtcagagggcctcaacatagtccaggactatgtcaagtcccactag 536
>dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080B09, full insert sequence Length = 754 Score = 303 bits (153), Expect = 3e-79 Identities = 305/353 (86%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||| ||||||| |||| || || ||||| | Sbjct: 183 actgctctgcagcttgtgatgaag-aagtcaagcgctcatg-atgggctcgtgaaggggc 240 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| || || || || |||||||||||||| |||||| | || ||||||||||||| Sbjct: 241 tccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgagg 300 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | || ||||||||||||||||| ||| | |||||||||||||| ||||||||||| |||| Sbjct: 301 actgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttc 360 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || | || |||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 361 acctcgttaccgtgcctagtgctaaaactcttggcgagtgggcagggctttgcaagattg 420 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 | |||||||||||||| || ||||| || |||||||| || |||||||| ||||||| | Sbjct: 421 attctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgttgtcaaggacttcg 480 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 ||||||| || ||||| || |||| || ||||| || |||||||| |||||| Sbjct: 481 gtgaagagtcagagggcctcaacatagtccaggactatgtcaagtcccactag 533
>dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B10, full insert sequence Length = 751 Score = 303 bits (153), Expect = 3e-79 Identities = 305/353 (86%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||| ||||||| |||| || || ||||| | Sbjct: 186 actgctctgcagcttgtgatgaag-aagtcaagcgctcatg-atgggctcgtgaaggggc 243 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| || || || || |||||||||||||| |||||| | || ||||||||||||| Sbjct: 244 tccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgagg 303 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | || ||||||||||||||||| ||| | |||||||||||||| ||||||||||| |||| Sbjct: 304 actgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttc 363 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || | || |||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 364 acctcgttaccgtgcctagtgctaaaactcttggcgagtgggcagggctttgcaagattg 423 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 | |||||||||||||| || ||||| || |||||||| || |||||||| ||||||| | Sbjct: 424 attctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgttgtcaaggacttcg 483 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 ||||||| || ||||| || |||| || ||||| || |||||||| |||||| Sbjct: 484 gtgaagagtcagagggcctcaacatagtccaggactatgtcaagtcccactag 536
>gb|AY109069.1| Zea mays PCO128954 mRNA sequence Length = 755 Score = 303 bits (153), Expect = 3e-79 Identities = 305/353 (86%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 ||||| |||||||| ||||||||| |||||||||||||||| |||| ||||| ||||| | Sbjct: 201 actgcgctgcagctggtgatgaag-aagtcaagtgctcatg-atggacttgtgaagggtc 258 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 | || || ||||| || || ||||||||||||||||||||| | || || |||||||||| Sbjct: 259 ttcgcgaggctgccaaggccattgagaagcatgctgctcagctttgcgttcttgctgagg 318 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | || |||||||| |||||||| ||||| || ||||| ||||||||||| ||||| |||| Sbjct: 319 actgtgaccagccagattatgtcaagctggtgaaggcgctctgtgctgaacacaatgttc 378 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || | ||||| || ||| ||| || |||||||||||||||||||||||||||||||||| Sbjct: 379 accttgtcactgttcctgctgctaagactcttggcgagtgggctgggctttgcaagattg 438 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 |||| |||||||||||||| ||||| || |||||||| ||||||||||| |||||||| | Sbjct: 439 actccgagggcaaggcaaggaaggttgtaggctgctcctgtgtcgttgtcaaggactacg 498 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 ||||||| || ||||| ||| |||| |||||||| || ||||||||||||||| Sbjct: 499 gtgaagaatctgagggccttaacatagtgcaggagtatgtcaagtcgcactag 551
>gb|AY104036.1| Zea mays PCO068483 mRNA sequence Length = 845 Score = 303 bits (153), Expect = 3e-79 Identities = 305/353 (86%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 ||||| |||||||| || |||||| |||||| ||||||||| |||||||||| ||||| | Sbjct: 231 actgccctgcagctcgtcatgaag-aagtcaggtgctcatg-atggccttgtgaagggtc 288 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 | ||||| ||||| ||||| || ||||||||||| |||||| |||| |||||||| |||| Sbjct: 289 ttcgtgaggctgccaaagccatcgagaagcatgccgctcagctctgcgtgcttgccgagg 348 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | |||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || | Sbjct: 349 actgcgaccagcctgattatgtcaagctggtgaaggctctctgcgctgagcacaatgtcc 408 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || |||| || |||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 409 acctggttactgtgcctagcgccaaaactcttggagagtgggctgggctttgcaagatcg 468 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 |||||||||||||||| || ||||| || |||||||| ||||| ||||| |||||||| | Sbjct: 469 actctgagggcaaggcgaggaaggttgtaggctgctcctgtgttgttgtcaaggactacg 528 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 | ||||| || || || ||| |||| |||||||| |||||||| ||||||||| Sbjct: 529 gcgaagaatctgaaggccttaacatagtgcaggagtacgtcaaatcgcactag 581
>gb|BT018309.1| Zea mays clone EL01T0206H08.c mRNA sequence Length = 608 Score = 295 bits (149), Expect = 7e-77 Identities = 304/353 (86%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 ||||||||||||||||| |||||| ||||| ||||||||| |||||||||| ||||| | Sbjct: 151 actgctctgcagcttgtcatgaag-aagtcgggtgctcatg-atggccttgttaagggtc 208 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 | ||||| ||||| ||||| ||||||||||||||||||||| | || |||||||| |||| Sbjct: 209 ttcgtgaggctgccaaagcaattgagaagcatgctgctcagctttgcgtgcttgcggagg 268 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | || ||||||||||||||||| ||||| || ||||| || || ||||||||||||||| Sbjct: 269 actgtgaccagcctgattatgtcaagctggtgaaggctctttgctctgagcacaacgttc 328 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattg 240 || |||| || |||||||| || |||||||||||||| ||| |||||||||||||||||| Sbjct: 329 acctggttactgtgcctagcgctaaaactcttggcgaatggtctgggctttgcaagattg 388 Query: 241 actctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatg 300 | |||||||||||||| || ||||| ||||| ||||| ||||| || || |||||||||| Sbjct: 389 attctgagggcaaggcgaggaaggttgtgggttgctcctgtgttgtcgtcaaggactatg 448 Query: 301 gtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 | ||||| || ||||| ||| |||| || ||||| ||||||||||| |||||| Sbjct: 449 gcgaagaatctgagggccttaacatagttcaggagtacgtcaagtcacactag 501
>gb|BT017581.1| Zea mays clone EL01N0429E05.c mRNA sequence Length = 747 Score = 283 bits (143), Expect = 3e-73 Identities = 269/311 (86%) Strand = Plus / Plus Query: 43 atggccttgtcaagggactccgtgaagctgcaaaagcgattgagaagcatgctgctcaga 102 |||||||||| ||||| || ||||| ||||| ||||| || ||||||||||| |||||| Sbjct: 178 atggccttgtgaagggtcttcgtgaggctgccaaagccatcgagaagcatgccgctcagc 237 Query: 103 tctgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactct 162 |||| |||||||| ||||| |||||||||||||||||||| ||||| || ||||| |||| Sbjct: 238 tctgcgtgcttgccgaggactgcgaccagcctgattatgtcaagctggtgaaggctctct 297 Query: 163 gtgctgagcacaacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtggg 222 | ||||||||||| || ||| |||| || |||||||| |||||||||||||| ||||||| Sbjct: 298 gcgctgagcacaatgtccacctggttactgtgcctagcgccaaaactcttggagagtggg 357 Query: 223 ctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtg 282 |||||||||||||||| ||||||||||||||||| || ||||| || |||||||| |||| Sbjct: 358 ctgggctttgcaagatcgactctgagggcaaggcgaggaaggttgtaggctgctcctgtg 417 Query: 283 tcgttgtgaaggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtca 342 | ||||| |||||||| || ||||| || || || ||| |||| |||||||| ||||||| Sbjct: 418 ttgttgtcaaggactacggcgaagaatctgaaggccttaacatagtgcaggagtacgtca 477 Query: 343 agtcgcactag 353 | ||||||||| Sbjct: 478 aatcgcactag 488
>gb|BT017926.1| Zea mays clone EL01N0519G01.c mRNA sequence Length = 580 Score = 280 bits (141), Expect = 4e-72 Identities = 296/345 (85%), Gaps = 2/345 (0%) Strand = Plus / Plus Query: 9 gcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggactccgtgaa 68 |||||| ||||||||| |||||||||||||||| | || ||||| ||||| |||||||| Sbjct: 9 gcagctcgtgatgaag-aagtcaagtgctcatg-acggacttgtgaagggtctccgtgag 66 Query: 69 gctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgac 128 ||||| || || || |||||||| || |||||| | || |||||||||||||| || ||| Sbjct: 67 gctgccaaggccatcgagaagcacgccgctcagctttgcgtgcttgctgaggactgtgac 126 Query: 129 cagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtc 188 ||||| ||||| || ||||| || ||||||||||| ||||||||||| |||||| ||||| Sbjct: 127 cagccagattacgtcaagctggtgaaggcactctgcgctgagcacaatgttcacctggtc 186 Query: 189 accgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgag 248 || || ||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 actgttcctgccgctaagactcttggcgagtgggctgggctttgcaagattgactctgag 246 Query: 249 ggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggactatggtgaagat 308 ||||||||||| ||||| || |||||||| || ||||| || |||||||| |||||||| Sbjct: 247 ggcaaggcaaggaaggttgtaggctgctcctgcgtcgtcgtcaaggactacggtgaagaa 306 Query: 309 tcggagggtcttcacatcgtgcaggaatacgtcaagtcgcactag 353 || ||||| ||| |||| |||||||| || ||||||||||||||| Sbjct: 307 tctgagggccttaacatagtgcaggagtatgtcaagtcgcactag 351
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 228 bits (115), Expect = 1e-56 Identities = 198/223 (88%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||| | Sbjct: 2647174 actgctctgcagcttgtgatgaag-aagtcaagtgctcatg-atgggcttgtgaagggtc 2647231 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| ||||| || || || |||||||||||||||||| | |||||||||||||||| Sbjct: 2647232 tccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgagg 2647291 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | |||||||| ||||||||||| ||| | || ||||| || ||||||||||||||||||| Sbjct: 2647292 actgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttc 2647351 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggc 223 || | || |||||||||||||| || ||||||||||||||||| Sbjct: 2647352 accttgttaccgtgcctagtgctaagactcttggcgagtgggc 2647394 Score = 212 bits (107), Expect = 8e-52 Identities = 196/223 (87%), Gaps = 2/223 (0%) Strand = Plus / Minus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||| ||||||| |||| || || ||||| | Sbjct: 7266232 actgctctgcagcttgtgatgaag-aagtcaagcgctcatg-atgggctcgtgaaggggc 7266175 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| || || || || |||||||||||||| |||||| | || ||||||||||||| Sbjct: 7266174 tccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgagg 7266115 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | || ||||||||||||||||| ||| | |||||||||||||| ||||||||||| |||| Sbjct: 7266114 actgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttc 7266055 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggc 223 || | || |||||||||||||| |||||||||||||||||||| Sbjct: 7266054 acctcgttaccgtgcctagtgctaaaactcttggcgagtgggc 7266012 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 227 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 286 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 2648042 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 2648101 Query: 287 tgtgaagg 294 ||| |||| Sbjct: 2648102 tgtcaagg 2648109 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 227 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 286 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 7265747 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 7265688 Query: 287 tgtgaagg 294 ||| |||| Sbjct: 7265687 tgtcaagg 7265680 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 292 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 351 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 2648197 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 2648256 Query: 352 ag 353 || Sbjct: 2648257 ag 2648258
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 228 bits (115), Expect = 1e-56 Identities = 198/223 (88%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||| | Sbjct: 72892 actgctctgcagcttgtgatgaag-aagtcaagtgctcatg-atgggcttgtgaagggtc 72949 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| ||||| || || || |||||||||||||||||| | |||||||||||||||| Sbjct: 72950 tccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgagg 73009 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | |||||||| ||||||||||| ||| | || ||||| || ||||||||||||||||||| Sbjct: 73010 actgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttc 73069 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggc 223 || | || |||||||||||||| || ||||||||||||||||| Sbjct: 73070 accttgttaccgtgcctagtgctaagactcttggcgagtgggc 73112 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 227 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 286 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 73760 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 73819 Query: 287 tgtgaagg 294 ||| |||| Sbjct: 73820 tgtcaagg 73827 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 292 aggactatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtcgcact 351 |||||||||||||||| || ||||| ||| |||| |||||||| || ||||| ||||||| Sbjct: 73915 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaaatcgcact 73974 Query: 352 ag 353 || Sbjct: 73975 ag 73976
>ref|XM_477174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2015 Score = 212 bits (107), Expect = 8e-52 Identities = 196/223 (87%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||| ||||||| |||| || || ||||| | Sbjct: 1115 actgctctgcagcttgtgatgaag-aagtcaagcgctcatg-atgggctcgtgaaggggc 1172 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| || || || || |||||||||||||| |||||| | || ||||||||||||| Sbjct: 1173 tccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgagg 1232 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | || ||||||||||||||||| ||| | |||||||||||||| ||||||||||| |||| Sbjct: 1233 actgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttc 1292 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggc 223 || | || |||||||||||||| |||||||||||||||||||| Sbjct: 1293 acctcgttaccgtgcctagtgctaaaactcttggcgagtgggc 1335 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 227 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 286 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 287 tgtgaagg 294 ||| |||| Sbjct: 1660 tgtcaagg 1667
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 212 bits (107), Expect = 8e-52 Identities = 196/223 (87%), Gaps = 2/223 (0%) Strand = Plus / Minus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||| ||||||| |||| || || ||||| | Sbjct: 106716 actgctctgcagcttgtgatgaag-aagtcaagcgctcatg-atgggctcgtgaaggggc 106659 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| || || || || |||||||||||||| |||||| | || ||||||||||||| Sbjct: 106658 tccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgagg 106599 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | || ||||||||||||||||| ||| | |||||||||||||| ||||||||||| |||| Sbjct: 106598 actgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttc 106539 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggc 223 || | || |||||||||||||| |||||||||||||||||||| Sbjct: 106538 acctcgttaccgtgcctagtgctaaaactcttggcgagtgggc 106496 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 227 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 286 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 106231 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 106172 Query: 287 tgtgaagg 294 ||| |||| Sbjct: 106171 tgtcaagg 106164
>dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K20, full insert sequence Length = 2015 Score = 212 bits (107), Expect = 8e-52 Identities = 196/223 (87%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 1 actgctctgcagcttgtgatgaagnaagtcaagtgctcatgnatggccttgtcaagggac 60 |||||||||||||||||||||||| |||||||| ||||||| |||| || || ||||| | Sbjct: 1115 actgctctgcagcttgtgatgaag-aagtcaagcgctcatg-atgggctcgtgaaggggc 1172 Query: 61 tccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgagg 120 ||||||| || || || || |||||||||||||| |||||| | || ||||||||||||| Sbjct: 1173 tccgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgagg 1232 Query: 121 attgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttc 180 | || ||||||||||||||||| ||| | |||||||||||||| ||||||||||| |||| Sbjct: 1233 actgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttc 1292 Query: 181 acttggtcaccgtgcctagtgccaaaactcttggcgagtgggc 223 || | || |||||||||||||| |||||||||||||||||||| Sbjct: 1293 acctcgttaccgtgcctagtgctaaaactcttggcgagtgggc 1335 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 227 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 286 ||||||||||||||| |||||||||||||| || ||||| || |||||||| || ||||| Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 287 tgtgaagg 294 ||| |||| Sbjct: 1660 tgtcaagg 1667
>emb|BX819283.1|CNS0A9Q1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 123 bits (62), Expect = 6e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 81 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 140 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 220 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 279 Query: 141 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 200 ||||||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 280 gtgaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 339 Query: 201 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 260 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 340 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 399 Query: 261 aaggtggtgggctgctcatgtgtcgt 286 ||||| || || ||||||||| |||| Sbjct: 400 aaggttgttggatgctcatgtctcgt 425
>ref|NM_179850.1| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.3 mRNA, complete cds Length = 694 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 81 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 140 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 239 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 298 Query: 141 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 200 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 299 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 358 Query: 201 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 260 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 359 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 418 Query: 261 aaggtggtgggctgctcatgtgtcgt 286 ||||| || || ||||||||| |||| Sbjct: 419 aaggttgttggatgctcatgtctcgt 444
>ref|NM_128766.4| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.1 mRNA, complete cds Length = 759 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 81 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 140 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 141 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 200 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 201 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 260 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 261 aaggtggtgggctgctcatgtgtcgt 286 ||||| || || ||||||||| |||| Sbjct: 457 aaggttgttggatgctcatgtctcgt 482
>ref|NM_179849.2| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.2 mRNA, complete cds Length = 723 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 81 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 140 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 141 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 200 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 201 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 260 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 261 aaggtggtgggctgctcatgtgtcgt 286 ||||| || || ||||||||| |||| Sbjct: 421 aaggttgttggatgctcatgtctcgt 446
>gb|AY133636.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 435 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 81 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 140 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 163 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 222 Query: 141 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 200 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 223 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 282 Query: 201 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 260 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 283 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 342 Query: 261 aaggtggtgggctgctcatgtgtcgt 286 ||||| || || ||||||||| |||| Sbjct: 343 aaggttgttggatgctcatgtctcgt 368
>gb|AY050324.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 696 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 81 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 140 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 141 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 200 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 201 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 260 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 261 aaggtggtgggctgctcatgtgtcgt 286 ||||| || || ||||||||| |||| Sbjct: 421 aaggttgttggatgctcatgtctcgt 446
>gb|AY085161.1| Arabidopsis thaliana clone 13453 mRNA, complete sequence Length = 732 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 81 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 140 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 141 gtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttggtcaccgtgcctagt 200 || |||||||| || || || || ||||| |||| | | | ||| | || || || ||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 201 gccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaaga 260 |||||||| || ||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 261 aaggtggtgggctgctcatgtgtcgt 286 ||||| || || ||||||||| |||| Sbjct: 457 aaggttgttggatgctcatgtctcgt 482
>ref|NM_101461.3| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.1 mRNA, complete cds Length = 861 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 114 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 173 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 174 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 233 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 234 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 293 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 294 gact 297 |||| Sbjct: 559 gact 562
>ref|NM_179342.1| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.2 mRNA, complete cds Length = 758 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 114 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 173 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 174 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 233 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 234 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 293 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 294 gact 297 |||| Sbjct: 456 gact 459
>gb|AY054130.1| Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 435 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 114 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 173 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 196 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 255 Query: 174 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 233 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 256 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 315 Query: 234 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 293 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 316 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 375 Query: 294 gact 297 |||| Sbjct: 376 gact 379
>gb|AF380626.1|AF380626 Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 692 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 114 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 173 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 276 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 335 Query: 174 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 233 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 336 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 395 Query: 234 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 293 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 396 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 455 Query: 294 gact 297 |||| Sbjct: 456 gact 459
>emb|BX815848.1|CNS0ABMM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 114 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 173 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 252 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 311 Query: 174 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 233 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 312 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 371 Query: 234 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 293 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 372 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 431 Query: 294 gact 297 |||| Sbjct: 432 gact 435
>emb|BX818653.1|CNS0AB7K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 687 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 114 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 173 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 241 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 300 Query: 174 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 233 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 301 gaagtcaggttgctaacagtaccaagtgccaagacccttggcgaatgggctggtctctgc 360 Query: 234 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 293 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 361 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 420 Query: 294 gact 297 |||| Sbjct: 421 gact 424
>gb|AY084613.1| Arabidopsis thaliana clone 11328 mRNA, complete sequence Length = 782 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 114 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcac 173 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 379 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctgatcac 438 Query: 174 aacgttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgc 233 | || ||| | || || || |||||||| || |||||||| |||||||| || ||| Sbjct: 439 gaagtcaggttgctaacagttccaagtgccaagacccttggcgaatgggctggtctctgc 498 Query: 234 aagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaag 293 |||||||| |||||||| || || || ||||| || || ||||||||| | ||||| ||| Sbjct: 499 aagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaag 558 Query: 294 gact 297 |||| Sbjct: 559 gact 562
>emb|BX813855.1|CNS0AEMV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 635 Score = 93.7 bits (47), Expect = 5e-16 Identities = 140/171 (81%) Strand = Plus / Plus Query: 127 accagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaacgttcacttgg 186 |||||||||||||||| |||||||| ||||| ||||||||||| ||| | || ||| Sbjct: 268 accagcctgattatgtcaagcttgtgaaggctctctgtgctgatcacgaagtcaggttgc 327 Query: 187 tcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctg 246 | || || || |||||||| || |||||||| |||||||| || ||||||||||| |||| Sbjct: 328 taacagttccaagtgccaagacccttggcgaatgggctggtctctgcaagattgattctg 387 Query: 247 agggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggact 297 |||| || || || ||||| || || ||||||||| | ||||| ||||||| Sbjct: 388 agggtaatgccaggaaggttgttggatgctcatgtcttgttgtcaaggact 438
>gb|AF154659.1| Nicotiana tabacum clone PR50 mRNA sequence Length = 708 Score = 91.7 bits (46), Expect = 2e-15 Identities = 229/290 (78%) Strand = Plus / Minus Query: 57 ggactccgtgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgct 116 ||||||| ||||| ||| || | |||||||||||||||||| ||| | |||||||| || Sbjct: 503 ggactccatgaaggtgctaaggtgattgagaagcatgctgcgcagctttgtgtgctagca 444 Query: 117 gaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctgagcacaac 176 ||||| ||||||||||| || ||||| ||||| ||||| || || |||||||| ||||| Sbjct: 443 gaggactgcgaccagccagactatgtcaagctggtcaaagctctttgtgctgatcacaat 384 Query: 177 gttcacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctgggctttgcaag 236 || ||| | || || || | ||| |||||||||||||| |||||||| | ||||| Sbjct: 383 gtcagtttgattacagttcccaatgcaaaaactcttggcgaatgggctggtttatgcaaa 324 Query: 237 attgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaaggac 296 ||||| ||||| || || ||||| || || || || || ||||| || |||||||| Sbjct: 323 attgattctgaagggaaagcaaggaaagttgttggttgtggctgtgttgtcgtgaaggat 264 Query: 297 tatggtgaagattcggagggtcttcacatcgtgcaggaatacgtcaagtc 346 ||||| ||||| | |||||||| || ||||| ||||| ||||| ||||| Sbjct: 263 tatggggaagagactgagggtctccatatcgtccaggagtacgtgaagtc 214
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 65 tgaagctgcaaaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattg 124 ||||| |||||||| |||||||||||||||||| ||| | ||||| || ||||| ||||| Sbjct: 44266 tgaaggtgcaaaagtgattgagaagcatgctgcacagctttgtgttctagctgaagattg 44207 Query: 125 cgaccagcctgattatgt 142 ||||| ||||||||||| Sbjct: 44206 tgaccaacctgattatgt 44189
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 75 aaagcgattgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcct 134 |||| ||| |||||||||||||| ||| ||||||| |||||||||||||| ||||| ||| Sbjct: 54505 aaagtgatcgagaagcatgctgcacagctctgtgttcttgctgaggattgtgaccaacct 54446 Query: 135 gatta 139 ||||| Sbjct: 54445 gatta 54441
>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence Length = 93881 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 105 tgtgtgcttgctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgt 164 ||||| ||||| || ||||| ||||||||||| ||||| || ||||||||||| || ||| Sbjct: 18467 tgtgttcttgcagaagattgtgaccagcctgactatgttaaacttgtcaaggctctttgt 18408 Query: 165 gctgagcacaa 175 ||||||||||| Sbjct: 18407 gctgagcacaa 18397
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 227 gctttgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgt 286 ||||||||||||||| ||||||||||| ||||| ||||| || || ||||||||| |||| Sbjct: 49936 gctttgcaagattgattctgagggcaatgcaaggaaggttgttggatgctcatgtctcgt 49995 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 81 attgagaagcatgctgctcagatctgtgtgcttgctgaggattgcgaccagcctgattat 140 |||||||||| | ||||||| ||||||| || ||||| |||||| |||| ||||||||| Sbjct: 49702 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 49761 Query: 141 gtgaagcttgt 151 || |||||||| Sbjct: 49762 gtcaagcttgt 49772
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 114 gctgaggattgcgaccagcctgattatgtgaagcttgtcaaggcactctgtgctga 169 ||||| || ||| |||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 7536 gctgaagactgcaaccagcctgattatgtcaagcttgtgaaggctctctgtgctga 7591 Score = 40.1 bits (20), Expect = 6.9 Identities = 53/64 (82%) Strand = Plus / Plus Query: 231 tgcaagattgactctgagggcaaggcaagaaaggtggtgggctgctcatgtgtcgttgtg 290 ||||||||||| |||||||| || || || ||||| || || ||||||||| | ||||| Sbjct: 7774 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 7833 Query: 291 aagg 294 |||| Sbjct: 7834 aagg 7837
>gb|BT012865.1| Lycopersicon esculentum clone 113957F, mRNA sequence Length = 749 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 195 cctagtgccaaaactcttggcgagtgggctgggctttgcaagattgactctgagggcaa 253 |||| |||||| || ||||| || |||||||| || ||||||||||||||||| ||||| Sbjct: 337 cctaatgccaagacacttggtgaatgggctggtctgtgcaagattgactctgaaggcaa 395
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 252 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 294 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 32277172 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 32277214 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 180 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 227 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 32276897 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 32276944
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 252 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 294 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 10939 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 10981 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 180 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 227 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 10664 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 10711
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 252 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 294 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 128844 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 128886 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 180 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 227 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 128569 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 128616
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 252 aaggcaagaaaggtggtgggctgctcatgtgtcgttgtgaagg 294 ||||| ||| ||||||| ||||||||||||||||| ||||||| Sbjct: 32367682 aaggctagagaggtggtcggctgctcatgtgtcgtcgtgaagg 32367724 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 180 cacttggtcaccgtgcctagtgccaaaactcttggcgagtgggctggg 227 ||||||||||| || |||||| | | |||||||||||| ||||||||| Sbjct: 32367407 cacttggtcactgttcctagtacaagaactcttggcgaatgggctggg 32367454
>gb|AY245452.1| Dermacentor variabilis 40S ribosomal protein S12 mRNA, complete cds Length = 607 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 210 cttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtg 269 |||||||||||||| || || |||||||| ||| || |||||||| || || ||||| Sbjct: 319 cttggcgagtgggccggcctctgcaagatcgacaaggaaggcaaggcgaggaaagtggtc 378 Query: 270 ggctgctcatgtgtcgttgtgaaggacta 298 |||||| |||||||| ||||||||||| Sbjct: 379 ggctgcagttgtgtcgtggtgaaggacta 407
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 238 ttgactctgagggcaaggcaagaaagg 264 |||||||||||| |||||||||||||| Sbjct: 166816 ttgactctgaggccaaggcaagaaagg 166842
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 238 ttgactctgagggcaaggcaagaaagg 264 |||||||||||| |||||||||||||| Sbjct: 149471 ttgactctgaggccaaggcaagaaagg 149497
>dbj|AK147335.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1014L18 product:Very KIND protein (Fragment), full insert sequence Length = 7300 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ttgactctgagggcaaggcaag 259 |||||||||||||||||||||| Sbjct: 2626 ttgactctgagggcaaggcaag 2605
>dbj|AK147693.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1108L06 product:Very KIND protein (Fragment), full insert sequence Length = 6954 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ttgactctgagggcaaggcaag 259 |||||||||||||||||||||| Sbjct: 2279 ttgactctgagggcaaggcaag 2258
>dbj|AK147672.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1106C24 product:Very KIND protein (Fragment), full insert sequence Length = 7026 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ttgactctgagggcaaggcaag 259 |||||||||||||||||||||| Sbjct: 2352 ttgactctgagggcaaggcaag 2331
>dbj|AK046817.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830014K08 product:Very KIND protein (Fragment) homolog [Mus musculus], full insert sequence Length = 3667 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ttgactctgagggcaaggcaag 259 |||||||||||||||||||||| Sbjct: 2362 ttgactctgagggcaaggcaag 2341
>ref|NM_177261.3| Mus musculus kinase non-catalytic C-lobe domain (KIND) containing 1 (Kndc1), mRNA Length = 7175 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ttgactctgagggcaaggcaag 259 |||||||||||||||||||||| Sbjct: 2483 ttgactctgagggcaaggcaag 2462
>gb|AC107822.18| Mus musculus chromosome 7, clone RP23-182C11, complete sequence Length = 220443 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ttgactctgagggcaaggcaag 259 |||||||||||||||||||||| Sbjct: 125647 ttgactctgagggcaaggcaag 125626
>emb|AJ580324.2|MMU580324 Mus musculus mRNA for Very KIND protein (VKIND gene) Length = 5229 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 ttgactctgagggcaaggcaag 259 |||||||||||||||||||||| Sbjct: 2134 ttgactctgagggcaaggcaag 2113
>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194006 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 tgcaaaagcgattgagaagca 91 ||||||||||||||||||||| Sbjct: 81627 tgcaaaagcgattgagaagca 81607
>gb|AC093371.6| Genomic sequence for Mus musculus, clone RP23-36P10, complete sequence Length = 177872 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 caaggcaagaaaggtggtggg 271 ||||||||||||||||||||| Sbjct: 146770 caaggcaagaaaggtggtggg 146790
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 tgcaaaagcgattgagaagca 91 ||||||||||||||||||||| Sbjct: 150268 tgcaaaagcgattgagaagca 150288
>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence Length = 184094 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gtgggctgggctttgcaaga 237 |||||||||||||||||||| Sbjct: 28659 gtgggctgggctttgcaaga 28678
>gb|AC093819.4| Homo sapiens BAC clone RP11-368D18 from 4, complete sequence Length = 168474 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcatgtctgaaacctgttag 432 |||||||||||||||||||| Sbjct: 126950 tcatgtctgaaacctgttag 126931
>gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome 1, complete sequence Length = 170885 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gactctgagggcaaggcaagaaag 263 ||||||||||| |||||||||||| Sbjct: 129232 gactctgaggggaaggcaagaaag 129255
>gb|AC124383.3| Mus musculus BAC clone RP24-411E14 from chromosome 18, complete sequence Length = 175177 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 gagggcaaggcaagaaaggt 265 |||||||||||||||||||| Sbjct: 16688 gagggcaaggcaagaaaggt 16707
>gb|AC024859.1| Caenorhabditis elegans cosmid Y71H2AM, complete sequence Length = 143786 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tatggtgaagattcggaggg 316 |||||||||||||||||||| Sbjct: 21060 tatggtgaagattcggaggg 21079
>emb|AL080314.29|HSDJ60O19 Human DNA sequence from clone RP1-60O19 on chromosome 6q16.2-21 Contains two novel genes (including FLJ22314), complete sequence Length = 161355 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cctagtgccaaaactcttgg 214 |||||||||||||||||||| Sbjct: 73353 cctagtgccaaaactcttgg 73372
>gb|AC165083.2| Mus musculus BAC clone RP23-411I6 from chromosome 18, complete sequence Length = 208109 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 gagggcaaggcaagaaaggt 265 |||||||||||||||||||| Sbjct: 156537 gagggcaaggcaagaaaggt 156556
>gb|AC126751.2| Homo sapiens chromosome 5 clone CTD-2224K20, complete sequence Length = 120658 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 tgaaacctgttagcctatgaacat 443 ||||| |||||||||||||||||| Sbjct: 55332 tgaaaactgttagcctatgaacat 55355
>gb|AC113402.2| Homo sapiens chromosome 5 clone RP11-454P21, complete sequence Length = 90271 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 tgaaacctgttagcctatgaacat 443 ||||| |||||||||||||||||| Sbjct: 64523 tgaaaactgttagcctatgaacat 64546
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcttgctgaggattgcgacc 129 |||||||||||||||||||| Sbjct: 756170 gcttgctgaggattgcgacc 756151
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 gtgcaggaatacgtcaagtcgcac 350 |||||||| ||||||||||||||| Sbjct: 3718687 gtgcaggactacgtcaagtcgcac 3718664
>ref|NM_065204.2| Caenorhabditis elegans Y71H2AM.10 (Y71H2AM.10) mRNA, complete cds Length = 2739 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tatggtgaagattcggaggg 316 |||||||||||||||||||| Sbjct: 963 tatggtgaagattcggaggg 944
>ref|XM_233076.2| PREDICTED: Rattus norvegicus similar to ribosomal protein S12 (LOC313283), mRNA Length = 424 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 aggcactctgtgctgagcac 173 |||||||||||||||||||| Sbjct: 208 aggcactctgtgctgagcac 227
>emb|BX248325.7| Zebrafish DNA sequence from clone CH211-233I11 in linkage group 9, complete sequence Length = 157207 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 gttttgttgaatcagagtttcgtt 478 |||||| ||||||||||||||||| Sbjct: 93499 gttttgatgaatcagagtttcgtt 93522
>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence Length = 218935 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gactctgagggcaaggcaagaaag 263 ||||||||||| |||||||||||| Sbjct: 35225 gactctgaggggaaggcaagaaag 35248
>gb|U94500.1|TNU94500 Tilapia nilotica ribosomal protein S12 mRNA, complete cds Length = 468 Score = 40.1 bits (20), Expect = 6.9 Identities = 74/92 (80%) Strand = Plus / Plus Query: 210 cttggcgagtgggctgggctttgcaagattgactctgagggcaaggcaagaaaggtggtg 269 ||||| ||||||| ||| || |||||||| ||| |||||| || || | ||||||||| Sbjct: 288 cttggtgagtgggttggtctgtgcaagatcgaccgtgagggtaaaccacgcaaggtggtg 347 Query: 270 ggctgctcatgtgtcgttgtgaaggactatgg 301 |||||| || |||||||| ||||| ||||| Sbjct: 348 ggctgcagctgcgtcgttgttaaggattatgg 379 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,694,181 Number of Sequences: 3902068 Number of extensions: 3694181 Number of successful extensions: 62814 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62575 Number of HSP's gapped (non-prelim): 217 length of query: 512 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 489 effective length of database: 17,143,297,704 effective search space: 8383072577256 effective search space used: 8383072577256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
