>Y638_HAEIN (P44796) UPF0274 protein HI0638|
          Length = 205

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +3

Query: 243 NRINKRKQQEVRYEGDPRFALPLMYIANLYESLVSDVDARLASLIGS 383
           NRI++ K+QE+ Y  D    L +M  AN+Y  ++S +  ++  ++GS
Sbjct: 106 NRISRLKEQEIHYARDSETMLSIM--ANIYSDIISPLGKKI-HILGS 149

>RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5038

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -3

Query: 602  IIWPLYDHQTIDYNKTDPLFFLYYKFRKLCLCCIRSSQLPPPEATISFLGKLLSQFPVQA 423
            + W ++D  ++ + K DP     Y+    CLC I  + LPP     S+  K   +  V A
Sbjct: 2678 LFWGIFD--SLAHKKYDPEL---YRMAMPCLCAIAGA-LPPDYVDASYSSKAEKKATVDA 2731

Query: 422  AGSFKSYP 399
             G+F   P
Sbjct: 2732 EGNFDPRP 2739

>RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5035

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -3

Query: 602  IIWPLYDHQTIDYNKTDPLFFLYYKFRKLCLCCIRSSQLPPPEATISFLGKLLSQFPVQA 423
            + W ++D  ++ + K DP     Y+    CLC I  + LPP     S+  K   +  V A
Sbjct: 2679 LFWGIFD--SLAHKKYDPEL---YRMAMPCLCAIAGA-LPPDYVDASYSSKAEKKATVDA 2732

Query: 422  AGSFKSYP 399
             G+F   P
Sbjct: 2733 EGNFDPRP 2740

>RGYR_SULSH (P74759) Reverse gyrase [Includes: Helicase (EC 3.6.1.-);|
           Topoisomerase (EC 5.99.1.3)]
          Length = 1166

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +3

Query: 426 LYRKLTQKFPKKGNCSFRRRELATSNATKTKFPELVVQEEKRIRFVVINGLVIIERPNNM 605
           L +K+ + FP   N +F        +  KTK  E   +E  R+ F +  GL+I+E P   
Sbjct: 535 LKKKMQKLFP---NTNFTSLSNINLSEIKTKLEESRKEEGNRVHFNISTGLLIVESPTKA 591

Query: 606 R 608
           +
Sbjct: 592 K 592

>COX10_GIBZE (Q4I5G1) Protoheme IX farnesyltransferase, mitochondrial precursor|
           (EC 2.5.1.-) (Heme O synthase)
          Length = 507

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +1

Query: 118 QKMLYLSKWHGLGSWTSSLTILSVKMLLRWQSPLCMTLSWPAIE*TKESNKR 273
           +++L+ S    +G W  +       +L  WQ P  M LSWP  E  K++  R
Sbjct: 328 RELLFASDGSSIGGWVMA------GLLFAWQFPHFMALSWPIREEYKKAGLR 373

>PEVRA_PIG (Q863Y7) Endogenous retrovirus A receptor precursor|
          Length = 446

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = -3

Query: 617 ILHSHIIWPLYDHQTIDYNKTDPLFFLYYKFRKLCLCCIRS-------SQLPPPEATISF 459
           ++ + ++ PL+ H T+   +   + FL   F     CC  +       S+LPPP     F
Sbjct: 89  VVGTALLAPLWQHLTVMAGQVHSVAFLALTFVLALACCASNVTYLPFLSRLPPPFLRSFF 148

Query: 458 LGKLLS 441
           LG+ LS
Sbjct: 149 LGQGLS 154

>RELA_MYCLE (Q49640) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 787

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 252 NKRKQQEVRYEGDPRFALPLMYIANLYESLVSDVDARLASLIGSREKTMGVALEA 416
           ++R   ++R  GDP    PL  +AN+   L  D+   +A+L+    +  G  LEA
Sbjct: 88  DQRHASQLRRSGDPYITHPLA-VANILAELGMDITTLVAALLHDTVEDTGYTLEA 141

>MCM6_DROME (Q9V461) DNA replication licensing factor Mcm6 (Minichromosome|
           maintenance 6 protein) (DmMCM6)
          Length = 817

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +3

Query: 324 NLYESLVSDVDARLASLIGSREKTMGVALEAAGGLYRKLTQKFPKKGN 467
           NLY++L+S +     S+ G+ E   G+ L+  GG+ +  T+K   +G+
Sbjct: 337 NLYQNLISSL---FPSIYGNDEVKRGILLQQFGGVAKTTTEKTSLRGD 381

>SEC17_NEUCR (Q9P6A5) Probable vesicular-fusion protein sec17 homolog|
          Length = 292

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
 Frame = +3

Query: 279 YEGDPRFALPLMYIANLYESLVSDVDARLASLIGSREKTMGVALEAAGGLYRKLTQK--F 452
           YE D   AL     AN     V+D+ A       + EK   VA  + G    + + K  F
Sbjct: 148 YENDGAVAL-----ANKLWLKVADLSALAGDFFAAIEKFEKVAEASLGNNLMRYSVKEYF 202

Query: 453 PKKGNCSFRRRELATSNATKTKFPELVVQEEKRIRFVVINGLVIIERPNNMRM 611
            K G CS   +++ T+    TK+ E       +  + ++  L+     NN+ M
Sbjct: 203 LKAGLCSLATKDMVTAQRNITKYAEKDPSFTGQREYQLLVDLLEAASNNNLEM 255

>ATPE_LACAC (Q9RGY0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1|
           sector epsilon subunit)
          Length = 146

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 42  VSXVDDEHSALENSSRPPSHINILTPKDVVPIEMARSRFLDIIIDH 179
           V  +D E S L N      HI ILTP  +  +++ RSR +   IDH
Sbjct: 29  VRAIDGERSILYN------HIPILTPLAISEVKVKRSREMGSRIDH 68

>E311_ADE05 (P17590) Early E3A 10.5 kDa glycoprotein|
          Length = 93

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 55  MTNTRLLRTAAGLLVILIS*HQKMLYLSKWHGLGSWTSSLTILSVKMLLRW 207
           MTNT     A GL     +  Q   +++ W  LG W  S+ ++ V +++ W
Sbjct: 1   MTNTTNAAAATGLTSTTNT-PQVSAFVNNWDNLGMWWFSIALMFVCLIIMW 50

>ATPG_PHOLL (Q7NA93) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 287

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 2/129 (1%)
 Frame = +3

Query: 93  PSHINILTPKDVV--PIEMARSRFLDIIIDHFIGQNAIEVAEPSLYDSILASNRINKRKQ 266
           PS   ++ P +++    +  R   L ++ + FI   + E     L       +   K+K 
Sbjct: 144 PSLSELIGPVNIMLRAYDEGRLDKLYVVTNKFINTMSQEPTITQLLPLPAGDDETLKKKS 203

Query: 267 QEVRYEGDPRFALPLMYIANLYESLVSDVDARLASLIGSREKTMGVALEAAGGLYRKLTQ 446
            +  YE DP+  L ++    +   +   V   LAS   +R   M  A +  G L ++L  
Sbjct: 204 WDYLYEPDPKALLDILLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQL 263

Query: 447 KFPKKGNCS 473
            + K    S
Sbjct: 264 VYNKARQAS 272

>SYM_COXBU (Q83B24) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 546

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 150 SRFLDIIIDHFIGQNAIEVAEPSLYDSILASNRINKRKQQEVRYEGDPRFALPLMYIANL 329
           SR    I  +F G+ A E+ EP LY+S L + +      + + Y    R  + L   AN 
Sbjct: 394 SRCAGFITKNFGGKLANELPEPDLYESFLQTEQTITDYYESLNYSKAVRVIMSLADRANQ 453

Query: 330 Y 332
           Y
Sbjct: 454 Y 454

>PTP69_DROME (P16620) Tyrosine-protein phosphatase 69D precursor (EC 3.1.3.48)|
           (Protein-tyrosine-phosphate phosphohydrolase) (DPTP)
          Length = 1462

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 501 NATKTKFPELVVQEEKRIRFVVINGL 578
           NA K ++P++   ++ R++  VINGL
Sbjct: 917 NACKNRYPDIKAYDQTRVKLAVINGL 942


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,068,561
Number of Sequences: 219361
Number of extensions: 1773650
Number of successful extensions: 4791
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4789
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)