ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8g15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190647.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1893 Score = 343 bits (173), Expect = 3e-91 Identities = 401/477 (84%) Strand = Plus / Plus Query: 3 aggagtttctcagttaggcctgacagcggtagctgttggttgccgtgacctggagtacat 62 ||||||||||||| ||||| ||||||| || ||||||||||||||||| |||||||||| Sbjct: 1203 aggagtttctcagctaggcttgacagccgttgctgttggttgccgtgaattggagtacat 1262 Query: 63 agctgcctatgtatctgatatcaccaacggtgctcttgaatctatcgggactttctgcaa 122 ||||||||||||||| ||||||||||| || || || || ||||| |||||||||||||| Sbjct: 1263 agctgcctatgtatcggatatcaccaatggggccctggagtctattgggactttctgcaa 1322 Query: 123 gaatctttatgacttccggcttgtcctgctcgacagacaaaagcaggtaactgatctgcc 182 ||||| || ||||| |||||||| || || |||||| ||| |||||||| |||||||| Sbjct: 1323 aaatctatacgactttcggcttgtgctacttgacagagaaagacaggtaacagatctgcc 1382 Query: 183 actcgacaacggcgttcgagctctgttaaggagctgcaccaagctccggagatttgctct 242 ||| ||||| || || | ||||||||||| | ||||| ||||| ||||| |||||||| Sbjct: 1383 acttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggaggtttgctct 1442 Query: 243 ctacctgagacctggagggctctcggacataggcctcgactacatcgggcagtacagcgg 302 |||||| ||||| |||||||| || || ||||| ||||||||| |||||||| || Sbjct: 1443 ctaccttagaccaggagggctttcagatgatggccttagctacatcggacagtacagtgg 1502 Query: 303 caacatccaatacatgctactgggcaacgtcggtgaatctgaccagggattgatccgctt 362 || ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 1503 aaatatccaatacatgctactgggcaatgttggtgaatctgaccatggattgatccgttt 1562 Query: 363 cgcaatcggatgcaccaacctgcggaagcttgagcttcggagctgctgcttcagcgagca 422 |||| | || ||||||||||| | ||||||||| | | ||||||||||||||||||| Sbjct: 1563 cgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgcttcagcgagcg 1622 Query: 423 agctctttccctcgcggtgctccatatgccgtcgctcaggtacatatgggtgcaagg 479 |||| | |||||||| || || || ||||| || || || ||||||||||||||||| Sbjct: 1623 agctttgtccctcgctgtactgcagatgccctccctgagatacatatgggtgcaagg 1679
>gb|AY168645.1| Oryza sativa (japonica cultivar-group) COI1 mRNA, complete cds Length = 2088 Score = 343 bits (173), Expect = 3e-91 Identities = 401/477 (84%) Strand = Plus / Plus Query: 3 aggagtttctcagttaggcctgacagcggtagctgttggttgccgtgacctggagtacat 62 ||||||||||||| ||||| ||||||| || ||||||||||||||||| |||||||||| Sbjct: 1163 aggagtttctcagctaggcttgacagccgttgctgttggttgccgtgaattggagtacat 1222 Query: 63 agctgcctatgtatctgatatcaccaacggtgctcttgaatctatcgggactttctgcaa 122 ||||||||||||||| ||||||||||| || || || || ||||| |||||||||||||| Sbjct: 1223 agctgcctatgtatcggatatcaccaatggggccctggagtctattgggactttctgcaa 1282 Query: 123 gaatctttatgacttccggcttgtcctgctcgacagacaaaagcaggtaactgatctgcc 182 ||||| || ||||| |||||||| || || |||||| ||| |||||||| |||||||| Sbjct: 1283 aaatctatacgactttcggcttgtgctacttgacagagaaagacaggtaacagatctgcc 1342 Query: 183 actcgacaacggcgttcgagctctgttaaggagctgcaccaagctccggagatttgctct 242 ||| ||||| || || | ||||||||||| | ||||| ||||| ||||| |||||||| Sbjct: 1343 acttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggaggtttgctct 1402 Query: 243 ctacctgagacctggagggctctcggacataggcctcgactacatcgggcagtacagcgg 302 |||||| ||||| |||||||| || || ||||| ||||||||| |||||||| || Sbjct: 1403 ctaccttagaccaggagggctttcagatgatggccttagctacatcggacagtacagtgg 1462 Query: 303 caacatccaatacatgctactgggcaacgtcggtgaatctgaccagggattgatccgctt 362 || ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 1463 aaatatccaatacatgctactgggcaatgttggtgaatctgaccatggattgatccgttt 1522 Query: 363 cgcaatcggatgcaccaacctgcggaagcttgagcttcggagctgctgcttcagcgagca 422 |||| | || ||||||||||| | ||||||||| | | ||||||||||||||||||| Sbjct: 1523 cgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgcttcagcgagcg 1582 Query: 423 agctctttccctcgcggtgctccatatgccgtcgctcaggtacatatgggtgcaagg 479 |||| | |||||||| || || || ||||| || || || ||||||||||||||||| Sbjct: 1583 agctttgtccctcgctgtactgcagatgccctccctgagatacatatgggtgcaagg 1639
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 343 bits (173), Expect = 3e-91 Identities = 401/477 (84%) Strand = Plus / Plus Query: 3 aggagtttctcagttaggcctgacagcggtagctgttggttgccgtgacctggagtacat 62 ||||||||||||| ||||| ||||||| || ||||||||||||||||| |||||||||| Sbjct: 36743200 aggagtttctcagctaggcttgacagccgttgctgttggttgccgtgaattggagtacat 36743259 Query: 63 agctgcctatgtatctgatatcaccaacggtgctcttgaatctatcgggactttctgcaa 122 ||||||||||||||| ||||||||||| || || || || ||||| |||||||||||||| Sbjct: 36743260 agctgcctatgtatcggatatcaccaatggggccctggagtctattgggactttctgcaa 36743319 Query: 123 gaatctttatgacttccggcttgtcctgctcgacagacaaaagcaggtaactgatctgcc 182 ||||| || ||||| |||||||| || || |||||| ||| |||||||| |||||||| Sbjct: 36743320 aaatctatacgactttcggcttgtgctacttgacagagaaagacaggtaacagatctgcc 36743379 Query: 183 actcgacaacggcgttcgagctctgttaaggagctgcaccaagctccggagatttgctct 242 ||| ||||| || || | ||||||||||| | ||||| ||||| ||||| |||||||| Sbjct: 36743380 acttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggaggtttgctct 36743439 Query: 243 ctacctgagacctggagggctctcggacataggcctcgactacatcgggcagtacagcgg 302 |||||| ||||| |||||||| || || ||||| ||||||||| |||||||| || Sbjct: 36743440 ctaccttagaccaggagggctttcagatgatggccttagctacatcggacagtacagtgg 36743499 Query: 303 caacatccaatacatgctactgggcaacgtcggtgaatctgaccagggattgatccgctt 362 || ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 36743500 aaatatccaatacatgctactgggcaatgttggtgaatctgaccatggattgatccgttt 36743559 Query: 363 cgcaatcggatgcaccaacctgcggaagcttgagcttcggagctgctgcttcagcgagca 422 |||| | || ||||||||||| | ||||||||| | | ||||||||||||||||||| Sbjct: 36743560 cgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgcttcagcgagcg 36743619 Query: 423 agctctttccctcgcggtgctccatatgccgtcgctcaggtacatatgggtgcaagg 479 |||| | |||||||| || || || ||||| || || || ||||||||||||||||| Sbjct: 36743620 agctttgtccctcgctgtactgcagatgccctccctgagatacatatgggtgcaagg 36743676
>gb|DQ028826.1| Oryza sativa (japonica cultivar-group) coronatine-insensitive 1 mRNA, complete cds Length = 1893 Score = 343 bits (173), Expect = 3e-91 Identities = 401/477 (84%) Strand = Plus / Plus Query: 3 aggagtttctcagttaggcctgacagcggtagctgttggttgccgtgacctggagtacat 62 ||||||||||||| ||||| ||||||| || ||||||||||||||||| |||||||||| Sbjct: 1203 aggagtttctcagctaggcttgacagccgttgctgttggttgccgtgaattggagtacat 1262 Query: 63 agctgcctatgtatctgatatcaccaacggtgctcttgaatctatcgggactttctgcaa 122 ||||||||||||||| ||||||||||| || || || || ||||| |||||||||||||| Sbjct: 1263 agctgcctatgtatcggatatcaccaatggggccctggagtctattgggactttctgcaa 1322 Query: 123 gaatctttatgacttccggcttgtcctgctcgacagacaaaagcaggtaactgatctgcc 182 ||||| || ||||| |||||||| || || |||||| ||| |||||||| |||||||| Sbjct: 1323 aaatctatacgactttcggcttgtgctacttgacagagaaagacaggtaacagatctgcc 1382 Query: 183 actcgacaacggcgttcgagctctgttaaggagctgcaccaagctccggagatttgctct 242 ||| ||||| || || | ||||||||||| | ||||| ||||| ||||| |||||||| Sbjct: 1383 acttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggaggtttgctct 1442 Query: 243 ctacctgagacctggagggctctcggacataggcctcgactacatcgggcagtacagcgg 302 |||||| ||||| |||||||| || || ||||| ||||||||| |||||||| || Sbjct: 1443 ctaccttagaccaggagggctttcagatgatggccttagctacatcggacagtacagtgg 1502 Query: 303 caacatccaatacatgctactgggcaacgtcggtgaatctgaccagggattgatccgctt 362 || ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 1503 aaatatccaatacatgctactgggcaatgttggtgaatctgaccatggattgatccgttt 1562 Query: 363 cgcaatcggatgcaccaacctgcggaagcttgagcttcggagctgctgcttcagcgagca 422 |||| | || ||||||||||| | ||||||||| | | ||||||||||||||||||| Sbjct: 1563 cgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgcttcagcgagcg 1622 Query: 423 agctctttccctcgcggtgctccatatgccgtcgctcaggtacatatgggtgcaagg 479 |||| | |||||||| || || || ||||| || || || ||||||||||||||||| Sbjct: 1623 agctttgtccctcgctgtactgcagatgccctccctgagatacatatgggtgcaagg 1679
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 343 bits (173), Expect = 3e-91 Identities = 401/477 (84%) Strand = Plus / Plus Query: 3 aggagtttctcagttaggcctgacagcggtagctgttggttgccgtgacctggagtacat 62 ||||||||||||| ||||| ||||||| || ||||||||||||||||| |||||||||| Sbjct: 69515 aggagtttctcagctaggcttgacagccgttgctgttggttgccgtgaattggagtacat 69574 Query: 63 agctgcctatgtatctgatatcaccaacggtgctcttgaatctatcgggactttctgcaa 122 ||||||||||||||| ||||||||||| || || || || ||||| |||||||||||||| Sbjct: 69575 agctgcctatgtatcggatatcaccaatggggccctggagtctattgggactttctgcaa 69634 Query: 123 gaatctttatgacttccggcttgtcctgctcgacagacaaaagcaggtaactgatctgcc 182 ||||| || ||||| |||||||| || || |||||| ||| |||||||| |||||||| Sbjct: 69635 aaatctatacgactttcggcttgtgctacttgacagagaaagacaggtaacagatctgcc 69694 Query: 183 actcgacaacggcgttcgagctctgttaaggagctgcaccaagctccggagatttgctct 242 ||| ||||| || || | ||||||||||| | ||||| ||||| ||||| |||||||| Sbjct: 69695 acttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggaggtttgctct 69754 Query: 243 ctacctgagacctggagggctctcggacataggcctcgactacatcgggcagtacagcgg 302 |||||| ||||| |||||||| || || ||||| ||||||||| |||||||| || Sbjct: 69755 ctaccttagaccaggagggctttcagatgatggccttagctacatcggacagtacagtgg 69814 Query: 303 caacatccaatacatgctactgggcaacgtcggtgaatctgaccagggattgatccgctt 362 || ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 69815 aaatatccaatacatgctactgggcaatgttggtgaatctgaccatggattgatccgttt 69874 Query: 363 cgcaatcggatgcaccaacctgcggaagcttgagcttcggagctgctgcttcagcgagca 422 |||| | || ||||||||||| | ||||||||| | | ||||||||||||||||||| Sbjct: 69875 cgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgcttcagcgagcg 69934 Query: 423 agctctttccctcgcggtgctccatatgccgtcgctcaggtacatatgggtgcaagg 479 |||| | |||||||| || || || ||||| || || || ||||||||||||||||| Sbjct: 69935 agctttgtccctcgctgtactgcagatgccctccctgagatacatatgggtgcaagg 69991
>dbj|AK121543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032A10, full insert sequence Length = 2163 Score = 343 bits (173), Expect = 3e-91 Identities = 401/477 (84%) Strand = Plus / Plus Query: 3 aggagtttctcagttaggcctgacagcggtagctgttggttgccgtgacctggagtacat 62 ||||||||||||| ||||| ||||||| || ||||||||||||||||| |||||||||| Sbjct: 1179 aggagtttctcagctaggcttgacagccgttgctgttggttgccgtgaattggagtacat 1238 Query: 63 agctgcctatgtatctgatatcaccaacggtgctcttgaatctatcgggactttctgcaa 122 ||||||||||||||| ||||||||||| || || || || ||||| |||||||||||||| Sbjct: 1239 agctgcctatgtatcggatatcaccaatggggccctggagtctattgggactttctgcaa 1298 Query: 123 gaatctttatgacttccggcttgtcctgctcgacagacaaaagcaggtaactgatctgcc 182 ||||| || ||||| |||||||| || || |||||| ||| |||||||| |||||||| Sbjct: 1299 aaatctatacgactttcggcttgtgctacttgacagagaaagacaggtaacagatctgcc 1358 Query: 183 actcgacaacggcgttcgagctctgttaaggagctgcaccaagctccggagatttgctct 242 ||| ||||| || || | ||||||||||| | ||||| ||||| ||||| |||||||| Sbjct: 1359 acttgacaatggtgtctgtgctctgttaagaaattgcacaaagcttcggaggtttgctct 1418 Query: 243 ctacctgagacctggagggctctcggacataggcctcgactacatcgggcagtacagcgg 302 |||||| ||||| |||||||| || || ||||| ||||||||| |||||||| || Sbjct: 1419 ctaccttagaccaggagggctttcagatgatggccttagctacatcggacagtacagtgg 1478 Query: 303 caacatccaatacatgctactgggcaacgtcggtgaatctgaccagggattgatccgctt 362 || ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 1479 aaatatccaatacatgctactgggcaatgttggtgaatctgaccatggattgatccgttt 1538 Query: 363 cgcaatcggatgcaccaacctgcggaagcttgagcttcggagctgctgcttcagcgagca 422 |||| | || ||||||||||| | ||||||||| | | ||||||||||||||||||| Sbjct: 1539 cgcagtgggctgcaccaaccttcagaagcttgaattgagaagctgctgcttcagcgagcg 1598 Query: 423 agctctttccctcgcggtgctccatatgccgtcgctcaggtacatatgggtgcaagg 479 |||| | |||||||| || || || ||||| || || || ||||||||||||||||| Sbjct: 1599 agctttgtccctcgctgtactgcagatgccctccctgagatacatatgggtgcaagg 1655
>gb|AY109565.1| Zea mays CL896_1 mRNA sequence Length = 2190 Score = 305 bits (154), Expect = 7e-80 Identities = 394/474 (83%) Strand = Plus / Plus Query: 3 aggagtttctcagttaggcctgacagcggtagctgttggttgccgtgacctggagtacat 62 |||||| |||||| |||| ||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 1270 aggagtctctcagataggtttgacagccgtagccgttggctgccgcgaactagagtacat 1329 Query: 63 agctgcctatgtatctgatatcaccaacggtgctcttgaatctatcgggactttctgcaa 122 |||||||||||||||||||||||| || || || || ||||| || || ||||||||||| Sbjct: 1330 agctgcctatgtatctgatatcacaaatggggcgctggaatccattggcactttctgcaa 1389 Query: 123 gaatctttatgacttccggcttgtcctgctcgacagacaaaagcaggtaactgatctgcc 182 |||||| ||||| ||||||||||| || || |||| ||| ||| || |||| || ||||| Sbjct: 1390 gaatctatatgatttccggcttgttctacttgacaaacagaagaagataacagacctgcc 1449 Query: 183 actcgacaacggcgttcgagctctgttaaggagctgcaccaagctccggagatttgctct 242 ||| ||||||||||| || || || | |||| |||| ||| || ||||| ||||| | Sbjct: 1450 acttgacaacggcgtccgtgccctactgaggaactgcgtcaaacttcggaggtttgcctt 1509 Query: 243 ctacctgagacctggagggctctcggacataggcctcgactacatcgggcagtacagcgg 302 |||||||||||| |||||||| || ||| ||||||||| ||||| || | ||||| || Sbjct: 1510 ctacctgagaccgggagggctttcagacgtaggcctcggttacattggactatacagtgg 1569 Query: 303 caacatccaatacatgctactgggcaacgtcggtgaatctgaccagggattgatccgctt 362 ||||||||||||||||| || |||||||| |||||||||||| | |||||||||| || Sbjct: 1570 gaacatccaatacatgctgctcggcaacgttggtgaatctgacaacggattgatccagtt 1629 Query: 363 cgcaatcggatgcaccaacctgcggaagcttgagcttcggagctgctgcttcagcgagca 422 |||| ||||||||||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 1630 tgcaacgggatgcaccaacctgcggaagctcgagctgaggggctgctgcttcagcgagcg 1689 Query: 423 agctctttccctcgcggtgctccatatgccgtcgctcaggtacatatgggtgca 476 |||||| | | || |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 1690 agctctggcagtggccgtgctccagatgccctcgctgaggtacatatgggtgca 1743
>gb|BT019152.1| Zea mays clone Contig815.F mRNA sequence Length = 1411 Score = 242 bits (122), Expect = 9e-61 Identities = 386/474 (81%) Strand = Plus / Plus Query: 3 aggagtttctcagttaggcctgacagcggtagctgttggttgccgtgacctggagtacat 62 |||||| |||||| ||||||||||||| |||||||| || ||||| || ||||||||||| Sbjct: 398 aggagtctctcagataggcctgacagccgtagctgtcggctgccgggaactggagtacat 457 Query: 63 agctgcctatgtatctgatatcaccaacggtgctcttgaatctatcgggactttctgcaa 122 ||| || || ||||| || ||||| ||||| || || || || ||||| || |||||||| Sbjct: 458 agcggcatacgtatccgacatcacaaacggggcgctggagtccatcggcaccttctgcaa 517 Query: 123 gaatctttatgacttccggcttgtcctgctcgacagacaaaagcaggtaactgatctgcc 182 ||| | || ||||||||||| ||||| ||||||| || || | |||| |||||||| Sbjct: 518 gaacatgtacgacttccggctcgtcctactcgacaagcagaacaaaataacggatctgcc 577 Query: 183 actcgacaacggcgttcgagctctgttaaggagctgcaccaagctccggagatttgctct 242 || |||||||| || |||||||| | |||||||| |||||||| ||| | || || | Sbjct: 578 gctggacaacggtgtccgagctctactgaggagctgtaccaagcttcggcggttcgcctt 637 Query: 243 ctacctgagacctggagggctctcggacataggcctcgactacatcgggcagtacagcgg 302 ||||||||||| |||||||||||||| |||||||| |||| |||| ||||||||||| Sbjct: 638 gtacctgagaccgggagggctctcggatgcaggcctcggctacgtcggacagtacagcgg 697 Query: 303 caacatccaatacatgctactgggcaacgtcggtgaatctgaccagggattgatccgctt 362 |||||||| |||||||| || ||||||||||| ||||| ||| | || ||||||| || Sbjct: 698 gaacatccagtacatgctgctcggcaacgtcggcgaatcggacaacgggctgatccggtt 757 Query: 363 cgcaatcggatgcaccaacctgcggaagcttgagcttcggagctgctgcttcagcgagca 422 ||| || || ||| |||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 758 cgcgatggggtgcgccaacctgcggaagctggagctgaggggctgctgcttcagcgagcg 817 Query: 423 agctctttccctcgcggtgctccatatgccgtcgctcaggtacatatgggtgca 476 || || | | || |||||||| ||||| ||||| |||||| |||||||||| Sbjct: 818 ggccctggcggtggccgtgctccagatgccctcgctgaggtacgtatgggtgca 871
>gb|AY109490.1| Zea mays CL920_1 mRNA sequence Length = 2298 Score = 168 bits (85), Expect = 1e-38 Identities = 352/443 (79%) Strand = Plus / Plus Query: 40 ggttgccgtgacctggagtacatagctgcctatgtatctgatatcaccaacggtgctctt 99 ||||||||||| ||||| || |||||||||||||| |||||||| ||||| || || | Sbjct: 1351 ggttgccgtgagctggaatatatagctgcctatgtgtctgatataaccaatggggccttg 1410 Query: 100 gaatctatcgggactttctgcaagaatctttatgacttccggcttgtcctgctcgacaga 159 |||||||||||||| |||||| || || |||||||||||||| || || || ||| Sbjct: 1411 gaatctatcgggacattctgcnnnnnnctatacgacttccggcttgttctacttgataga 1470 Query: 160 caaaagcaggtaactgatctgccactcgacaacggcgttcgagctctgttaaggagctgc 219 || || | |||| || ||||||| ||||| || || |||||| |||| ||| ||||| Sbjct: 1471 gaagagaggataacagacttgccactggacaatggtgtccgagctttgttgaggggctgc 1530 Query: 220 accaagctccggagatttgctctctacctgagacctggagggctctcggacataggcctc 279 |||||||| ||||| |||||||| ||| ||||||| ||||||||||| || ||| ||| Sbjct: 1531 accaagcttcggaggtttgctctgtacttgagaccaggagggctctcagatgcaggtctc 1590 Query: 280 gactacatcgggcagtacagcggcaacatccaatacatgctactgggcaacgtcggtgaa 339 | |||||| || |||| |||||| |||||||| |||||||| || || || || || ||| Sbjct: 1591 ggctacattggacagtgcagcggaaacatccagtacatgcttctcggtaatgttggggaa 1650 Query: 340 tctgaccagggattgatccgcttcgcaatcggatgcaccaacctgcggaagcttgagctt 399 |||| | ||||||||| |||||||| | || ||| |||||||| |||||||| || Sbjct: 1651 actgatgatggattgatcagcttcgcattgggttgcgtaaacctgcgaaagcttgaactc 1710 Query: 400 cggagctgctgcttcagcgagcaagctctttccctcgcggtgctccatatgccgtcgctc 459 |||| |||||||||||||||| ||| || |||| || | || |||||||| || || Sbjct: 1711 aggagttgctgcttcagcgagcgagcactggcccttgcaatactacatatgccttccctg 1770 Query: 460 aggtacatatgggtgcaaggcta 482 |||||| ||||||| || ||||| Sbjct: 1771 aggtacgtatgggttcagggcta 1793
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 111 bits (56), Expect = 2e-21 Identities = 227/284 (79%) Strand = Plus / Plus Query: 43 tgccgtgacctggagtacatagctgcctatgtatctgatatcaccaacggtgctcttgaa 102 |||||||| ||||| ||||||||||||||||| ||||||||||| || || || || || Sbjct: 36842 tgccgtgaactggaatacatagctgcctatgtgtctgatatcacaaatggggccctggag 36901 Query: 103 tctatcgggactttctgcaagaatctttatgacttccggcttgtcctgctcgacagacaa 162 ||||| |||||||||||||| ||||||| |||||||| |||||||| ||||| ||| || Sbjct: 36902 tctattgggactttctgcaaaaatctttgcgacttccgtcttgtcctactcgatagagaa 36961 Query: 163 aagcaggtaactgatctgccactcgacaacggcgttcgagctctgttaaggagctgcacc 222 || | |||| ||| |||| | ||||| || || || || ||| | ||| ||||||| Sbjct: 36962 gagaggataacagatttgcccttagacaatggtgtccgtgcactgctgaggggctgcacg 37021 Query: 223 aagctccggagatttgctctctacctgagacctggagggctctcggacataggcctcgac 282 || || ||||| |||||||| ||| ||||||| || || || || || | |||||| | | Sbjct: 37022 aaacttcggaggtttgctctatacttgagaccagggggactttcagatacaggccttggc 37081 Query: 283 tacatcgggcagtacagcggcaacatccaatacatgctactggg 326 || || || |||||||| || | |||||||||||||| ||||| Sbjct: 37082 tatattggacagtacagtggaattatccaatacatgcttctggg 37125 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 379 aacctgcggaagcttgagcttcggagctgctgcttcagcgagcaagct 426 |||||||||||||||||||| |||| || |||||||| ||||||||| Sbjct: 37178 aacctgcggaagcttgagctaaggagttgttgcttcagtgagcaagct 37225
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 2e-21 Identities = 227/284 (79%) Strand = Plus / Plus Query: 43 tgccgtgacctggagtacatagctgcctatgtatctgatatcaccaacggtgctcttgaa 102 |||||||| ||||| ||||||||||||||||| ||||||||||| || || || || || Sbjct: 21917628 tgccgtgaactggaatacatagctgcctatgtgtctgatatcacaaatggggccctggag 21917687 Query: 103 tctatcgggactttctgcaagaatctttatgacttccggcttgtcctgctcgacagacaa 162 ||||| |||||||||||||| ||||||| |||||||| |||||||| ||||| ||| || Sbjct: 21917688 tctattgggactttctgcaaaaatctttgcgacttccgtcttgtcctactcgatagagaa 21917747 Query: 163 aagcaggtaactgatctgccactcgacaacggcgttcgagctctgttaaggagctgcacc 222 || | |||| ||| |||| | ||||| || || || || ||| | ||| ||||||| Sbjct: 21917748 gagaggataacagatttgcccttagacaatggtgtccgtgcactgctgaggggctgcacg 21917807 Query: 223 aagctccggagatttgctctctacctgagacctggagggctctcggacataggcctcgac 282 || || ||||| |||||||| ||| ||||||| || || || || || | |||||| | | Sbjct: 21917808 aaacttcggaggtttgctctatacttgagaccagggggactttcagatacaggccttggc 21917867 Query: 283 tacatcgggcagtacagcggcaacatccaatacatgctactggg 326 || || || |||||||| || | |||||||||||||| ||||| Sbjct: 21917868 tatattggacagtacagtggaattatccaatacatgcttctggg 21917911 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 379 aacctgcggaagcttgagcttcggagctgctgcttcagcgagcaagct 426 |||||||||||||||||||| |||| || |||||||| ||||||||| Sbjct: 21917964 aacctgcggaagcttgagctaaggagttgttgcttcagtgagcaagct 21918011
>dbj|AK101514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F05, full insert sequence Length = 2305 Score = 111 bits (56), Expect = 2e-21 Identities = 227/284 (79%) Strand = Plus / Plus Query: 43 tgccgtgacctggagtacatagctgcctatgtatctgatatcaccaacggtgctcttgaa 102 |||||||| ||||| ||||||||||||||||| ||||||||||| || || || || || Sbjct: 1358 tgccgtgaactggaatacatagctgcctatgtgtctgatatcacaaatggggccctggag 1417 Query: 103 tctatcgggactttctgcaagaatctttatgacttccggcttgtcctgctcgacagacaa 162 ||||| |||||||||||||| ||||||| |||||||| |||||||| ||||| ||| || Sbjct: 1418 tctattgggactttctgcaaaaatctttgcgacttccgtcttgtcctactcgatagagaa 1477 Query: 163 aagcaggtaactgatctgccactcgacaacggcgttcgagctctgttaaggagctgcacc 222 || | |||| ||| |||| | ||||| || || || || ||| | ||| ||||||| Sbjct: 1478 gagaggataacagatttgcccttagacaatggtgtccgtgcactgctgaggggctgcacg 1537 Query: 223 aagctccggagatttgctctctacctgagacctggagggctctcggacataggcctcgac 282 || || ||||| |||||||| ||| ||||||| || || || || || | |||||| | | Sbjct: 1538 aaacttcggaggtttgctctatacttgagaccagggggactttcagatacaggccttggc 1597 Query: 283 tacatcgggcagtacagcggcaacatccaatacatgctactggg 326 || || || |||||||| || | |||||||||||||| ||||| Sbjct: 1598 tatattggacagtacagtggaattatccaatacatgcttctggg 1641 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 379 aacctgcggaagcttgagcttcggagctgctgcttcagcgagcaagct 426 |||||||||||||||||||| |||| || |||||||| ||||||||| Sbjct: 1694 aacctgcggaagcttgagctaaggagttgttgcttcagtgagcaagct 1741
>gb|AY111944.1| Zea mays CL896_2 mRNA sequence Length = 579 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 353 tgatccgcttcgcaatcggatgcaccaacctgcggaagcttgagcttcggagctgctgct 412 ||||||| ||||| || || ||| |||||||||||||||| ||||| || ||||||||| Sbjct: 17 tgatccggttcgcgatggggtgcgccaacctgcggaagctggagctgaggggctgctgct 76 Query: 413 tcagcgagcaagctctttccctcgcggtgctccatatgccgtcgctcaggtacatatggg 472 ||||||||| || || | | || |||||||| ||||| ||||| |||||| |||||| Sbjct: 77 tcagcgagcgggccctggcggtggccgtgctccagatgccctcgctgaggtacgtatggg 136 Query: 473 tgca 476 |||| Sbjct: 137 tgca 140
>ref|XM_523172.1| PREDICTED: Pan troglodytes LOC467777 (LOC467777), mRNA Length = 2781 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 aggagctgcaccaagctccg 230 |||||||||||||||||||| Sbjct: 1048 aggagctgcaccaagctccg 1067
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gttcgagctctgttaaggag 215 |||||||||||||||||||| Sbjct: 458299 gttcgagctctgttaaggag 458318
>ref|XM_567829.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK01550) partial mRNA Length = 1303 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gttcgagctctgttaaggag 215 |||||||||||||||||||| Sbjct: 508 gttcgagctctgttaaggag 489
>gb|DQ378878.1| Cyprinus carpio clone LiC-12 microsatellite sequence Length = 310 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 agcgagcaagctctttccct 434 |||||||||||||||||||| Sbjct: 29 agcgagcaagctctttccct 10
>gb|AC154444.2| Mus musculus BAC clone RP24-179H6 from chromosome 13, complete sequence Length = 150924 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gacagacaaaagcaggtaac 173 |||||||||||||||||||| Sbjct: 32332 gacagacaaaagcaggtaac 32351
>gb|AC138553.3| Ornithorhynchus anatinus clone OA_Bb-524H4, complete sequence Length = 144677 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 cgagcaagctctttccctcg 436 |||||||||||||||||||| Sbjct: 24876 cgagcaagctctttccctcg 24857 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,886,726 Number of Sequences: 3902068 Number of extensions: 2886726 Number of successful extensions: 48197 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48128 Number of HSP's gapped (non-prelim): 60 length of query: 488 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 466 effective length of database: 17,147,199,772 effective search space: 7990595093752 effective search space used: 7990595093752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
