ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPT2B_MOUSE (Q9DBP0) Sodium-dependent phosphate transport protei... 29 3.9
2NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein ... 29 3.9
3NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protei... 28 8.6
4NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protei... 28 8.6

>NPT2B_MOUSE (Q9DBP0) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 697

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 177 SLTNAKPLQIGSRVFLVPXXAGFIVTKPGNPLKARFR-SLCMFFF 46
           S+  A PL +GS +          +  PGN L++  + +LC FFF
Sbjct: 450 SIERAYPLTLGSNIGTTTTAILAALASPGNTLRSSLQIALCHFFF 494



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>NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34 me
          Length = 695

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 177 SLTNAKPLQIGSRVFLVPXXAGFIVTKPGNPLKARFR-SLCMFFF 46
           S+  A PL +GS +          +  PGN L++  + +LC FFF
Sbjct: 450 SIERAYPLTLGSNIGTTTTAILAALASPGNTLRSSLQIALCHFFF 494



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>NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 690

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 177 SLTNAKPLQIGSRVFLVPXXAGFIVTKPGNPLKARFR-SLCMFFF 46
           ++  A PL +GS +          +  PGN L++  + +LC FFF
Sbjct: 450 TIERAYPLTLGSNIGTTTTAILAALASPGNALRSSLQIALCHFFF 494



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>NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 689

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 177 SLTNAKPLQIGSRVFLVPXXAGFIVTKPGNPLKARFR-SLCMFFF 46
           ++  A PL +GS +          +  PGN L++  + +LC FFF
Sbjct: 449 TIERAYPLTLGSNIGTTTTAILAALASPGNALRSSLQIALCHFFF 493


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,563,989
Number of Sequences: 219361
Number of extensions: 455217
Number of successful extensions: 1195
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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