ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8g05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 Score = 1084 bits (547), Expect = 0.0 Identities = 573/578 (99%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 9 aagggttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttga 68 |||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 1304 aagggttttcat-ctctgatgaattcgatgatcttcttccaaaatacctcagctttttga 1362 Query: 69 tgggtattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaaca 128 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1363 tgggtattgttgactcag-acacattgcccctcaatgtatcccgag-aaatgcttcaaca 1420 Query: 129 acatagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattag 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1421 acatagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattag 1480 Query: 189 gaaacttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaa 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1481 gaaacttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaa 1540 Query: 249 gagtgcaatggaggagaagaagggccagtatgccaagttctggaacgagtttggcaaatc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1541 gagtgcaatggaggagaagaagggccagtatgccaagttctggaacgagtttggcaaatc 1600 Query: 309 agtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgag 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601 agtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgag 1660 Query: 369 attcgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggat 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1661 attcgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggat 1720 Query: 429 gaaatcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaa 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1721 gaaatcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaa 1780 Query: 489 atctccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1781 atctccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccc 1840 Query: 549 cgtggatgagtacctgatgcaatacctcatggactacg 586 |||||||||||||||||||||||||||||||||||||| Sbjct: 1841 cgtggatgagtacctgatgcaatacctcatggactacg 1878
>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full insert sequence Length = 2708 Score = 674 bits (340), Expect = 0.0 Identities = 521/578 (90%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 9 aagggttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttga 68 |||||||||||| ||||| |||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 1349 aagggttttcat-ctctgatgaatttgatgagcttcttccgaagtatctcagctttttga 1407 Query: 69 tgggtattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaaca 128 |||| | || ||||| | |||||||||| ||||||||||| |||| ||||||| ||||| Sbjct: 1408 agggtctcgtcgactc-ggacacattgcctctcaatgtatcacgag-aaatgctccaaca 1465 Query: 129 acatagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattag 188 ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1466 acatagcagcctgaagaccatcaagaagaaactaatccgcaaagctcttgacatgattag 1525 Query: 189 gaaacttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaa 248 |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 1526 aaaacttgctgaggaagatcctgatgagtacagcaacaaagataagacagatgaagaaaa 1585 Query: 249 gagtgcaatggaggagaagaagggccagtatgccaagttctggaacgagtttggcaaatc 308 ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1586 aagtgcaatggaggagaaaaagggccagtatgccaagttctggaatgagtttggaaaatc 1645 Query: 309 agtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgag 368 ||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1646 agtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttgcaaagcttctgag 1705 Query: 369 attcgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggat 428 ||| || ||| ||||||| || |||||||||| ||| ||||||||||| ||||||||||| Sbjct: 1706 atttgaaagtaccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggat 1765 Query: 429 gaaatcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaa 488 ||| ||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||| Sbjct: 1766 gaagccagggcagaaggacatcttttacattaccggaagcagcaaggaacaattagagaa 1825 Query: 489 atctccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccc 548 ||| || ||||||||| ||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 1826 atcaccgttccttgagaggctaaccaaaaagaactacgaggttatctacttcactgaccc 1885 Query: 549 cgtggatgagtacctgatgcaatacctcatggactacg 586 || || |||||| |||||||||||||||||||||||| Sbjct: 1886 tgttgacgagtacttgatgcaatacctcatggactacg 1923
>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full insert sequence Length = 2026 Score = 674 bits (340), Expect = 0.0 Identities = 521/578 (90%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 9 aagggttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttga 68 |||||||||||| ||||| |||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 671 aagggttttcat-ctctgatgaatttgatgagcttcttccgaagtatctcagctttttga 729 Query: 69 tgggtattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaaca 128 |||| | || ||||| | |||||||||| ||||||||||| |||| ||||||| ||||| Sbjct: 730 agggtctcgtcgactc-ggacacattgcctctcaatgtatcacgag-aaatgctccaaca 787 Query: 129 acatagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattag 188 ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 788 acatagcagcctgaagaccatcaagaagaaactaatccgcaaagctcttgacatgattag 847 Query: 189 gaaacttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaa 248 |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 848 aaaacttgctgaggaagatcctgatgagtacagcaacaaagataagacagatgaagaaaa 907 Query: 249 gagtgcaatggaggagaagaagggccagtatgccaagttctggaacgagtttggcaaatc 308 ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 908 aagtgcaatggaggagaaaaagggccagtatgccaagttctggaatgagtttggaaaatc 967 Query: 309 agtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgag 368 ||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 968 agtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttgcaaagcttctgag 1027 Query: 369 attcgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggat 428 ||| || ||| ||||||| || |||||||||| ||| ||||||||||| ||||||||||| Sbjct: 1028 atttgaaagtaccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggat 1087 Query: 429 gaaatcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaa 488 ||| ||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||| Sbjct: 1088 gaagccagggcagaaggacatcttttacattaccggaagcagcaaggaacaattagagaa 1147 Query: 489 atctccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccc 548 ||| || ||||||||| ||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 1148 atcaccgttccttgagaggctaaccaaaaagaactacgaggttatctacttcactgaccc 1207 Query: 549 cgtggatgagtacctgatgcaatacctcatggactacg 586 || || |||||| |||||||||||||||||||||||| Sbjct: 1208 tgttgacgagtacttgatgcaatacctcatggactacg 1245
>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds Length = 2731 Score = 658 bits (332), Expect = 0.0 Identities = 519/578 (89%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 9 aagggttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttga 68 |||||||| ||| ||||| |||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 1343 aagggtttccat-ctctgatgaatttgatgagcttcttccgaagtatctcagctttttga 1401 Query: 69 tgggtattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaaca 128 |||| | || ||||| | |||||||||| ||||||||||| |||| ||||||| ||||| Sbjct: 1402 agggtctcgtcgactc-ggacacattgcctctcaatgtatcacgag-aaatgctccaaca 1459 Query: 129 acatagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattag 188 |||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1460 acatagtagcctgaagaccatcaagaagaaactaatccgcaaagctcttgacatgattag 1519 Query: 189 gaaacttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaa 248 |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 1520 aaaacttgctgaggaagatcctgatgagtacagcaacaaagataagacagatgaagaaaa 1579 Query: 249 gagtgcaatggaggagaagaagggccagtatgccaagttctggaacgagtttggcaaatc 308 ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1580 aagtgcaatggaggagaaaaagggccagtatgccaagttctggaatgagtttggaaaatc 1639 Query: 309 agtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgag 368 ||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1640 agtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttgcaaagcttctgag 1699 Query: 369 attcgagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggat 428 ||| || ||| ||||||| || |||||||||| ||| ||||||||||| ||||||||||| Sbjct: 1700 atttgaaagtaccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggat 1759 Query: 429 gaaatcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaa 488 ||| ||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||| Sbjct: 1760 gaagccagggcagaaggacatcttttacattaccggaagcagcaaggaacaattagagaa 1819 Query: 489 atctccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccc 548 ||| || ||||||||| ||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 1820 atcaccgttccttgagaggctaaccaaaaagaactacgaggttatctacttcactgaccc 1879 Query: 549 cgtggatgagtacctgatgcaatacctcatggactacg 586 || || |||||| |||||||||||||||||||||||| Sbjct: 1880 tgttgacgagtacttgatgcaatacctcatggactacg 1917
>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence Length = 2511 Score = 575 bits (290), Expect = e-161 Identities = 498/565 (88%), Gaps = 2/565 (0%) Strand = Plus / Plus Query: 22 ctctgntgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttga 81 ||||| |||||| ||||| |||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1117 ctctgatgaatttgatgaccttcttccgaagtatctcagctttttgaggggtattgttga 1176 Query: 82 ctcagnacacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctg 141 ||||| ||||| |||| || ||||| || |||| ||||||| || ||||||| ||||||| Sbjct: 1177 ctcag-acacactgccgctgaatgtgtcacgag-aaatgctccagcaacataacagtctg 1234 Query: 142 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 201 ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1235 aagactatcaagaagaagctgatccgcaaagctcttgacatgattaggaaacttgctgaa 1294 Query: 202 gaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaagagtgcaatggag 261 || || |||||||||||||||||||| || ||||||||||| || || | || |||||| Sbjct: 1295 gaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaaatgagatggag 1354 Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1355 gagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaatcaagctgggt 1414 Query: 322 atcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattcgagagttcc 381 ||||||||||| ||||| ||||||||||| ||||| |||||||| ||||| || ||| || Sbjct: 1415 atcattgaagacgcaactaacaggaaccgccttgcgaagcttcttagatttgaaagtacc 1474 Query: 382 aagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggcag 441 ||||| ||||||||||||| ||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1475 aagtcggatggcaaacttgcctcccttgacgagtacatttcaaggatgaagccagggcag 1534 Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 501 || |||||||||||||| || ||||||||||| || ||||| ||||| ||||| ||||| Sbjct: 1535 aaagacatcttctacctcacgggaagcagcaaagagcagctggagaagtctccgttcctc 1594 Query: 502 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 561 ||| |||||||||||| ||||||||||| |||| |||||||||||| |||| |||||| Sbjct: 1595 gagaggctaaccaagaagaactacgaggtcatcttcttcaccgaccctatggacgagtac 1654 Query: 562 ctgatgcaatacctcatggactacg 586 |||||||| ||||| |||||||||| Sbjct: 1655 ctgatgcagtacctgatggactacg 1679
>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence Length = 1546 Score = 563 bits (284), Expect = e-157 Identities = 504/574 (87%), Gaps = 3/574 (0%) Strand = Plus / Plus Query: 13 gttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttgatggg 72 |||||||| ||||| ||||| |||||||||||||| |||||||| |||||||||| ||| Sbjct: 183 gttttcat-ctctgacgaatttgatgatcttcttcccaagtacctgagctttttgaaggg 241 Query: 73 tattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaacaacat 132 |||||||||||| | |||| ||||||| || || || |||| ||||||||||||||||| Sbjct: 242 tattgttgactc-ggacacgctgcccctgaacgtgtcacgag-aaatgcttcaacaacat 299 Query: 133 agcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaa 192 |||||||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 300 agcagtctcaagaccatcaagaagaagctgatccgcaaagcccttgacatgatcaggaaa 359 Query: 193 cttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaagagt 252 |||||||| || || |||||||||||||||||||| || ||||||||||| || || || Sbjct: 360 cttgctgaagaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaagc 419 Query: 253 gcaatggaggagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtc 312 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || Sbjct: 420 gagatggaggagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaatc 479 Query: 313 aagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattc 372 |||||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| ||||| Sbjct: 480 aagctgggtatcatcgaagacgcgactaacagaaaccgccttgcgaagcttcttagattt 539 Query: 373 gagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaa 432 |||||| ||||||| ||||||||||||| ||||||||| ||||| || ||| ||||||| Sbjct: 540 gagagtaccaagtcggatggcaaacttgcctcccttgacgagtacatctcacggatgaag 599 Query: 433 tcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatct 492 ||||||||||| |||||||||||| | || ||||||||||| || ||||| ||||| ||| Sbjct: 600 tcagggcagaaagacatcttctacatcacgggaagcagcaaagagcagctggagaagtct 659 Query: 493 ccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtg 552 |||||||| ||| |||||||||||| ||||||||||| |||| |||||||||||||||| Sbjct: 660 ccattcctcgagaggctaaccaagaagaactacgaggtcatcttcttcaccgaccccgtg 719 Query: 553 gatgagtacctgatgcaatacctcatggactacg 586 || |||||||||||||| ||||| |||||||||| Sbjct: 720 gacgagtacctgatgcagtacctgatggactacg 753
>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence Length = 1544 Score = 563 bits (284), Expect = e-157 Identities = 504/574 (87%), Gaps = 3/574 (0%) Strand = Plus / Plus Query: 13 gttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttgatggg 72 |||||||| ||||| ||||| |||||||||||||| |||||||| |||||||||| ||| Sbjct: 169 gttttcat-ctctgacgaatttgatgatcttcttcccaagtacctgagctttttgaaggg 227 Query: 73 tattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaacaacat 132 |||||||||||| | |||| ||||||| || || || |||| ||||||||||||||||| Sbjct: 228 tattgttgactc-ggacacgctgcccctgaacgtgtcacgag-aaatgcttcaacaacat 285 Query: 133 agcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaa 192 |||||||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 286 agcagtctcaagaccatcaagaagaagctgatccgcaaagcccttgacatgatcaggaaa 345 Query: 193 cttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaagagt 252 |||||||| || || |||||||||||||||||||| || ||||||||||| || || || Sbjct: 346 cttgctgaagaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaagc 405 Query: 253 gcaatggaggagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtc 312 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || Sbjct: 406 gagatggaggagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaatc 465 Query: 313 aagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattc 372 |||||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| ||||| Sbjct: 466 aagctgggtatcatcgaagacgcgactaacagaaaccgccttgcgaagcttcttagattt 525 Query: 373 gagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaa 432 |||||| ||||||| ||||||||||||| ||||||||| ||||| || ||| ||||||| Sbjct: 526 gagagtaccaagtcggatggcaaacttgcctcccttgacgagtacatctcacggatgaag 585 Query: 433 tcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatct 492 ||||||||||| |||||||||||| | || ||||||||||| || ||||| ||||| ||| Sbjct: 586 tcagggcagaaagacatcttctacatcacgggaagcagcaaagagcagctggagaagtct 645 Query: 493 ccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtg 552 |||||||| ||| |||||||||||| ||||||||||| |||| |||||||||||||||| Sbjct: 646 ccattcctcgagaggctaaccaagaagaactacgaggtcatcttcttcaccgaccccgtg 705 Query: 553 gatgagtacctgatgcaatacctcatggactacg 586 || |||||||||||||| ||||| |||||||||| Sbjct: 706 gacgagtacctgatgcagtacctgatggactacg 739
>gb|AY103537.1| Zea mays PCO098403 mRNA sequence Length = 2806 Score = 563 bits (284), Expect = e-157 Identities = 504/574 (87%), Gaps = 3/574 (0%) Strand = Plus / Plus Query: 13 gttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttgatggg 72 |||||||| ||||| ||||| |||||||||||||| |||||||| |||||||||| ||| Sbjct: 1339 gttttcat-ctctgacgaatttgatgatcttcttcccaagtacctgagctttttgaaggg 1397 Query: 73 tattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaacaacat 132 |||||||||||| | |||| ||||||| || || || |||| ||||||||||||||||| Sbjct: 1398 tattgttgactc-ggacacgctgcccctgaacgtgtcacgag-aaatgcttcaacaacat 1455 Query: 133 agcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaa 192 |||||||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 1456 agcagtctcaagaccatcaagaagaagctgatccgcaaagcccttgacatgatcaggaaa 1515 Query: 193 cttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaagagt 252 |||||||| || || |||||||||||||||||||| || ||||||||||| || || || Sbjct: 1516 cttgctgaagaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaagc 1575 Query: 253 gcaatggaggagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtc 312 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || Sbjct: 1576 gagatggaggagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaatc 1635 Query: 313 aagctgggaatcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattc 372 |||||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| ||||| Sbjct: 1636 aagctgggtatcatcgaagacgcgactaacagaaaccgccttgcgaagcttcttagattt 1695 Query: 373 gagagttccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaa 432 |||||| ||||||| ||||||||||||| ||||||||| ||||| || ||| ||||||| Sbjct: 1696 gagagtaccaagtcggatggcaaacttgcctcccttgacgagtacatctcacggatgaag 1755 Query: 433 tcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatct 492 ||||||||||| |||||||||||| | || ||||||||||| || ||||| ||||| ||| Sbjct: 1756 tcagggcagaaagacatcttctacatcacgggaagcagcaaagagcagctggagaagtct 1815 Query: 493 ccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtg 552 |||||||| ||| |||||||||||| ||||||||||| |||| |||||||||||||||| Sbjct: 1816 ccattcctcgagaggctaaccaagaagaactacgaggtcatcttcttcaccgaccccgtg 1875 Query: 553 gatgagtacctgatgcaatacctcatggactacg 586 || |||||||||||||| ||||| |||||||||| Sbjct: 1876 gacgagtacctgatgcagtacctgatggactacg 1909
>gb|BT016737.1| Zea mays clone Contig570 mRNA sequence Length = 808 Score = 426 bits (215), Expect = e-116 Identities = 360/406 (88%), Gaps = 2/406 (0%) Strand = Plus / Plus Query: 22 ctctgntgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttga 81 ||||| |||||| ||||| |||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 405 ctctgatgaatttgatgaccttcttccgaagtatctcagctttttgaggggtattgttga 464 Query: 82 ctcagnacacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctg 141 ||||| ||||| |||| || ||||| || |||| ||||||| || ||||||| ||||||| Sbjct: 465 ctcag-acacactgccgctgaatgtgtcacgag-aaatgctccagcaacataacagtctg 522 Query: 142 aagaccatcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgag 201 ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 523 aagactatcaagaagaagctgatccgcaaagctcttgacatgattaggaaacttgctgaa 582 Query: 202 gaggatcctgatgagtacagcaacaaagaaaagacagatgatgaaaagagtgcaatggag 261 || || |||||||||||||||||||| || ||||||||||| || || | || |||||| Sbjct: 583 gaagaccctgatgagtacagcaacaaggataagacagatgaagagaaaaatgagatggag 642 Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| Sbjct: 643 gagaagaagggccagtacgccaagttctggaatgagtttggcaaatcaatcaagctgggt 702 Query: 322 atcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattcgagagttcc 381 ||||||||||| ||||| ||||||||||| ||||| |||||||| ||||| || ||| || Sbjct: 703 atcattgaagacgcaactaacaggaaccgccttgcgaagcttcttagatttgaaagtacc 762 Query: 382 aagtcagatggcaaacttgtctcccttgatgagtatatttcaagga 427 ||||| ||||||||||||| ||||||||| ||||| |||||||||| Sbjct: 763 aagtcggatggcaaacttgcctcccttgacgagtacatttcaagga 808
>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full insert sequence Length = 1944 Score = 333 bits (168), Expect = 4e-88 Identities = 261/292 (89%) Strand = Plus / Plus Query: 295 gagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtctt 354 |||||||| |||||||||||| |||| ||||||||||| ||||| ||||||||||||||| Sbjct: 872 gagtttggaaaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtctt 931 Query: 355 gcaaagcttctgagattcgagagttccaagtcagatggcaaacttgtctcccttgatgag 414 ||||||||||||||||| || ||| ||||||| || |||||||||| ||| ||||||||| Sbjct: 932 gcaaagcttctgagatttgaaagtaccaagtcggaaggcaaacttgcctctcttgatgag 991 Query: 415 tatatttcaaggatgaaatcagggcagaaggacatcttctaccttacaggaagcagcaag 474 || |||||||||||||| ||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 992 tacatttcaaggatgaagccagggcagaaggacatcttttacattaccggaagcagcaag 1051 Query: 475 gaacagctagagaaatctccattccttgagcagctaaccaagaaaaactacgaggttatc 534 ||||| |||||||||| || ||||||||| ||||||||| || ||||||||||||||| Sbjct: 1052 gaacaattagagaaatcaccgttccttgagaggctaaccaaaaagaactacgaggttatc 1111 Query: 535 tacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||||||| ||||| || || |||||| |||||||||||||||||||||||| Sbjct: 1112 tacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacg 1163
>dbj|AK063385.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-G08, full insert sequence Length = 1577 Score = 270 bits (136), Expect = 5e-69 Identities = 212/234 (90%), Gaps = 3/234 (1%) Strand = Plus / Plus Query: 9 aagggttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttga 68 |||||||||||| ||||| |||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 1345 aagggttttcat-ctctgatgaatttgatgagcttcttccgaagtatctcagctttttga 1403 Query: 69 tgggtattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaaca 128 |||| | || ||||| | |||||||||| ||||||||||| |||| ||||||| ||||| Sbjct: 1404 agggtctcgtcgactc-ggacacattgcctctcaatgtatcacgag-aaatgctccaaca 1461 Query: 129 acatagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattag 188 ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1462 acatagcagcctgaagaccatcaagaagaaactaatccgcaaagctcttgacatgattag 1521 Query: 189 gaaacttgctgaggaggatcctgatgagtacagcaacaaagaaaagacagatga 242 |||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 1522 aaaacttgctgaggaagatcctgatgagtacagcaacaaagataagacagatga 1575
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 212 bits (107), Expect = 1e-51 Identities = 141/151 (93%), Gaps = 1/151 (0%) Strand = Plus / Minus Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| ||||||||||| |||| ||||||| |||||||||||||| ||||||||| Sbjct: 11433 acacattgcctctcaatgtatcacgag-aaatgctccaacaacatagcagcctgaagacc 11375 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 11374 atcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgaggaagat 11315 Query: 208 cctgatgagtacagcaacaaagaaaagacag 238 ||||||||||||||||||||||| ||||||| Sbjct: 11314 cctgatgagtacagcaacaaagataagacag 11284 Score = 198 bits (100), Expect = 1e-47 Identities = 127/136 (93%) Strand = Plus / Minus Query: 236 cagatgatgaaaagagtgcaatggaggagaagaagggccagtatgccaagttctggaacg 295 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 11210 cagatgaagaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatg 11151 Query: 296 agtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttg 355 ||||||| |||||||||||| |||| ||||||||||| ||||| |||||||||||||||| Sbjct: 11150 agtttggaaaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttg 11091 Query: 356 caaagcttctgagatt 371 |||||||||||||||| Sbjct: 11090 caaagcttctgagatt 11075 Score = 157 bits (79), Expect = 5e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 380 ccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggc 439 ||||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 10984 ccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggc 10925 Query: 440 agaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcc 499 ||||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||| Sbjct: 10924 agaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcc 10865 Query: 500 ttgagcagctaaccaagaaaaactacgaggt 530 ||||| ||||||||| || ||||||||||| Sbjct: 10864 ttgagaggctaaccaaaaagaactacgaggt 10834 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||||||||||||||| ||||| || || |||||| |||||||||||||||||||||||| Sbjct: 10259 aggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacg 10200 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 9 aagggttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttga 68 |||||||||||| ||||| |||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 11592 aagggttttcat-ctctgatgaatttgatgagcttcttccgaagtatctcagctttttga 11534
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 212 bits (107), Expect = 1e-51 Identities = 141/151 (93%), Gaps = 1/151 (0%) Strand = Plus / Minus Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| ||||||||||| |||| ||||||| |||||||||||||| ||||||||| Sbjct: 29930727 acacattgcctctcaatgtatcacgag-aaatgctccaacaacatagcagcctgaagacc 29930669 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 29930668 atcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgaggaagat 29930609 Query: 208 cctgatgagtacagcaacaaagaaaagacag 238 ||||||||||||||||||||||| ||||||| Sbjct: 29930608 cctgatgagtacagcaacaaagataagacag 29930578 Score = 198 bits (100), Expect = 1e-47 Identities = 127/136 (93%) Strand = Plus / Minus Query: 236 cagatgatgaaaagagtgcaatggaggagaagaagggccagtatgccaagttctggaacg 295 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 29930504 cagatgaagaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatg 29930445 Query: 296 agtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttg 355 ||||||| |||||||||||| |||| ||||||||||| ||||| |||||||||||||||| Sbjct: 29930444 agtttggaaaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttg 29930385 Query: 356 caaagcttctgagatt 371 |||||||||||||||| Sbjct: 29930384 caaagcttctgagatt 29930369 Score = 157 bits (79), Expect = 5e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 380 ccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggc 439 ||||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 29930278 ccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggc 29930219 Query: 440 agaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcc 499 ||||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||| Sbjct: 29930218 agaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcc 29930159 Query: 500 ttgagcagctaaccaagaaaaactacgaggt 530 ||||| ||||||||| || ||||||||||| Sbjct: 29930158 ttgagaggctaaccaaaaagaactacgaggt 29930128 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||||||||||||||| ||||| || || |||||| |||||||||||||||||||||||| Sbjct: 29929553 aggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacg 29929494 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 9 aagggttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttga 68 |||||||||||| ||||| |||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 29930886 aagggttttcat-ctctgatgaatttgatgagcttcttccgaagtatctcagctttttga 29930828 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 cattgaagatgcaacaaaca 343 |||||||||||||||||||| Sbjct: 24392858 cattgaagatgcaacaaaca 24392877
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 212 bits (107), Expect = 1e-51 Identities = 141/151 (93%), Gaps = 1/151 (0%) Strand = Plus / Minus Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| ||||||||||| |||| ||||||| |||||||||||||| ||||||||| Sbjct: 6875 acacattgcctctcaatgtatcacgag-aaatgctccaacaacatagcagcctgaagacc 6817 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 6816 atcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgaggaagat 6757 Query: 208 cctgatgagtacagcaacaaagaaaagacag 238 ||||||||||||||||||||||| ||||||| Sbjct: 6756 cctgatgagtacagcaacaaagataagacag 6726 Score = 198 bits (100), Expect = 1e-47 Identities = 127/136 (93%) Strand = Plus / Minus Query: 236 cagatgatgaaaagagtgcaatggaggagaagaagggccagtatgccaagttctggaacg 295 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 6652 cagatgaagaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatg 6593 Query: 296 agtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttg 355 ||||||| |||||||||||| |||| ||||||||||| ||||| |||||||||||||||| Sbjct: 6592 agtttggaaaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttg 6533 Query: 356 caaagcttctgagatt 371 |||||||||||||||| Sbjct: 6532 caaagcttctgagatt 6517 Score = 157 bits (79), Expect = 5e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 380 ccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggc 439 ||||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 6426 ccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggc 6367 Query: 440 agaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcc 499 ||||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||| Sbjct: 6366 agaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcc 6307 Query: 500 ttgagcagctaaccaagaaaaactacgaggt 530 ||||| ||||||||| || ||||||||||| Sbjct: 6306 ttgagaggctaaccaaaaagaactacgaggt 6276 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||||||||||||||| ||||| || || |||||| |||||||||||||||||||||||| Sbjct: 5701 aggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacg 5642 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 9 aagggttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttga 68 |||||||||||| ||||| |||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 7034 aagggttttcat-ctctgatgaatttgatgagcttcttccgaagtatctcagctttttga 6976
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 212 bits (107), Expect = 1e-51 Identities = 141/151 (93%), Gaps = 1/151 (0%) Strand = Plus / Minus Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| ||||||||||| |||| ||||||| |||||||||||||| ||||||||| Sbjct: 126240 acacattgcctctcaatgtatcacgag-aaatgctccaacaacatagcagcctgaagacc 126182 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 126181 atcaagaagaaactaatccgcaaagctcttgacatgattagaaaacttgctgaggaagat 126122 Query: 208 cctgatgagtacagcaacaaagaaaagacag 238 ||||||||||||||||||||||| ||||||| Sbjct: 126121 cctgatgagtacagcaacaaagataagacag 126091 Score = 198 bits (100), Expect = 1e-47 Identities = 127/136 (93%) Strand = Plus / Minus Query: 236 cagatgatgaaaagagtgcaatggaggagaagaagggccagtatgccaagttctggaacg 295 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 126017 cagatgaagaaaaaagtgcaatggaggagaaaaagggccagtatgccaagttctggaatg 125958 Query: 296 agtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacaggaaccgtcttg 355 ||||||| |||||||||||| |||| ||||||||||| ||||| |||||||||||||||| Sbjct: 125957 agtttggaaaatcagtcaagttgggcatcattgaagacgcaactaacaggaaccgtcttg 125898 Query: 356 caaagcttctgagatt 371 |||||||||||||||| Sbjct: 125897 caaagcttctgagatt 125882 Score = 157 bits (79), Expect = 5e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 380 ccaagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggc 439 ||||||| || |||||||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 125791 ccaagtcggaaggcaaacttgcctctcttgatgagtacatttcaaggatgaagccagggc 125732 Query: 440 agaaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcc 499 ||||||||||||| ||| |||| ||||||||||||||||| |||||||||| || |||| Sbjct: 125731 agaaggacatcttttacattaccggaagcagcaaggaacaattagagaaatcaccgttcc 125672 Query: 500 ttgagcagctaaccaagaaaaactacgaggt 530 ||||| ||||||||| || ||||||||||| Sbjct: 125671 ttgagaggctaaccaaaaagaactacgaggt 125641 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||||||||||||||| ||||| || || |||||| |||||||||||||||||||||||| Sbjct: 125066 aggttatctacttcactgaccctgttgacgagtacttgatgcaatacctcatggactacg 125007 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 9 aagggttttcatactctgntgaattcgatgatcttcttccaaagtacctcagctttttga 68 |||||||||||| ||||| |||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 126399 aagggttttcat-ctctgatgaatttgatgagcttcttccgaagtatctcagctttttga 126341
>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.1 mRNA, complete cds Length = 2707 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 501 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1750 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1809 Query: 502 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 561 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1810 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1869 Query: 562 ctgatgcaatacctcatggactacg 586 ||||||||||||| ||||| |||| Sbjct: 1870 ttgatgcaatacctgatggattacg 1894 Score = 79.8 bits (40), Expect = 9e-12 Identities = 153/188 (81%), Gaps = 2/188 (1%) Strand = Plus / Plus Query: 28 tgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttgactcagn 87 |||||| ||||| ||||| || ||||| | || || |||| |||| |||||||||| | Sbjct: 1335 tgaatttgatgagcttctgcctaagtatttgagtttcttgaagggtcttgttgactctg- 1393 Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| || |||||||| ||| |||||||||||||||| ||||| | ||||| Sbjct: 1394 acacattgcctctaaatgtatcaagag-aaatgcttcaacaacacagcagcttaaagaca 1452 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 || |||||||| || ||||| ||||| ||||| ||||| | || |||||||| || ||| Sbjct: 1453 attaagaagaagcttatccgaaaggcgcttgatatgatccgcaagcttgctgaagaagat 1512 Query: 208 cctgatga 215 |||||||| Sbjct: 1513 cctgatga 1520 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||| || || | || |||||||||||||||||||| || ||||| || || Sbjct: 1570 gagaagaagggtcaatacacaaaattctggaacgagtttggcaagtctgtcaaactaggt 1629 Query: 322 atcattgaagatgcaacaaacaggaaccg 350 |||||||| ||||| | ||||||||||| Sbjct: 1630 atcattgaggatgctgctaacaggaaccg 1658
>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.2 mRNA, complete cds Length = 2707 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 501 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1750 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1809 Query: 502 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 561 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1810 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1869 Query: 562 ctgatgcaatacctcatggactacg 586 ||||||||||||| ||||| |||| Sbjct: 1870 ttgatgcaatacctgatggattacg 1894 Score = 79.8 bits (40), Expect = 9e-12 Identities = 153/188 (81%), Gaps = 2/188 (1%) Strand = Plus / Plus Query: 28 tgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttgactcagn 87 |||||| ||||| ||||| || ||||| | || || |||| |||| |||||||||| | Sbjct: 1335 tgaatttgatgagcttctgcctaagtatttgagtttcttgaagggtcttgttgactctg- 1393 Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| || |||||||| ||| |||||||||||||||| ||||| | ||||| Sbjct: 1394 acacattgcctctaaatgtatcaagag-aaatgcttcaacaacacagcagcttaaagaca 1452 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 || |||||||| || ||||| ||||| ||||| ||||| | || |||||||| || ||| Sbjct: 1453 attaagaagaagcttatccgaaaggcgcttgatatgatccgcaagcttgctgaagaagat 1512 Query: 208 cctgatga 215 |||||||| Sbjct: 1513 cctgatga 1520 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||| || || | || |||||||||||||||||||| || ||||| || || Sbjct: 1570 gagaagaagggtcaatacacaaaattctggaacgagtttggcaagtctgtcaaactaggt 1629 Query: 322 atcattgaagatgcaacaaacaggaaccg 350 |||||||| ||||| | ||||||||||| Sbjct: 1630 atcattgaggatgctgctaacaggaaccg 1658
>gb|AY072394.1| Arabidopsis thaliana HSP90-like protein (At4g24190) mRNA, complete cds Length = 897 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 501 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 768 Query: 502 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 561 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 769 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 828 Query: 562 ctgatgcaatacctcatggactacg 586 ||||||||||||| ||||| |||| Sbjct: 829 ttgatgcaatacctgatggattacg 853 Score = 79.8 bits (40), Expect = 9e-12 Identities = 153/188 (81%), Gaps = 2/188 (1%) Strand = Plus / Plus Query: 28 tgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttgactcagn 87 |||||| ||||| ||||| || ||||| | || || |||| |||| |||||||||| | Sbjct: 294 tgaatttgatgagcttctgcctaagtatttgagtttcttgaagggtcttgttgactctg- 352 Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| || |||||||| ||| |||||||||||||||| ||||| | ||||| Sbjct: 353 acacattgcctctaaatgtatcaagag-aaatgcttcaacaacacagcagcttaaagaca 411 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 || |||||||| || ||||| ||||| ||||| ||||| | || |||||||| || ||| Sbjct: 412 attaagaagaagcttatccgaaaggcgcttgatatgatccgcaagcttgctgaagaagat 471 Query: 208 cctgatga 215 |||||||| Sbjct: 472 cctgatga 479 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||| || || | || |||||||||||||||||||| || ||||| || || Sbjct: 529 gagaagaagggtcaatacacaaaattctggaacgagtttggcaagtctgtcaaactaggt 588 Query: 322 atcattgaagatgcaacaaacaggaaccg 350 |||||||| ||||| | ||||||||||| Sbjct: 589 atcattgaggatgctgctaacaggaaccg 617
>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds Length = 2702 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 501 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1744 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1803 Query: 502 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 561 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1804 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1863 Query: 562 ctgatgcaatacctcatggactacg 586 ||||||||||||| ||||| |||| Sbjct: 1864 ttgatgcaatacctgatggattacg 1888 Score = 79.8 bits (40), Expect = 9e-12 Identities = 153/188 (81%), Gaps = 2/188 (1%) Strand = Plus / Plus Query: 28 tgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttgactcagn 87 |||||| ||||| ||||| || ||||| | || || |||| |||| |||||||||| | Sbjct: 1329 tgaatttgatgagcttctgcctaagtatttgagtttcttgaagggtcttgttgactctg- 1387 Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| || |||||||| ||| |||||||||||||||| ||||| | ||||| Sbjct: 1388 acacattgcctctaaatgtatcaagag-aaatgcttcaacaacacagcagcttaaagaca 1446 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 || |||||||| || ||||| ||||| ||||| ||||| | || |||||||| || ||| Sbjct: 1447 attaagaagaagcttatccgaaaggcgcttgatatgatccgcaagcttgctgaagaagat 1506 Query: 208 cctgatga 215 |||||||| Sbjct: 1507 cctgatga 1514 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||| || || | || |||||||||||||||||||| || ||||| || || Sbjct: 1564 gagaagaagggtcaatacacaaaattctggaacgagtttggcaagtctgtcaaactaggt 1623 Query: 322 atcattgaagatgcaacaaacaggaaccg 350 |||||||| ||||| | ||||||||||| Sbjct: 1624 atcattgaggatgctgctaacaggaaccg 1652
>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds Length = 2472 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 501 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1696 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1755 Query: 502 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 561 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1756 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1815 Query: 562 ctgatgcaatacctcatggactacg 586 ||||||||||||| ||||| |||| Sbjct: 1816 ttgatgcaatacctgatggattacg 1840 Score = 79.8 bits (40), Expect = 9e-12 Identities = 153/188 (81%), Gaps = 2/188 (1%) Strand = Plus / Plus Query: 28 tgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttgactcagn 87 |||||| ||||| ||||| || ||||| | || || |||| |||| |||||||||| | Sbjct: 1281 tgaatttgatgagcttctgcctaagtatttgagtttcttgaagggtcttgttgactctg- 1339 Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| || |||||||| ||| |||||||||||||||| ||||| | ||||| Sbjct: 1340 acacattgcctctaaatgtatcaagag-aaatgcttcaacaacacagcagcttaaagaca 1398 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 || |||||||| || ||||| ||||| ||||| ||||| | || |||||||| || ||| Sbjct: 1399 attaagaagaagcttatccgaaaggcgcttgatatgatccgcaagcttgctgaagaagat 1458 Query: 208 cctgatga 215 |||||||| Sbjct: 1459 cctgatga 1466 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||| || || | || |||||||||||||||||||| || ||||| || || Sbjct: 1516 gagaagaagggtcaatacacaaaattctggaacgagtttggcaagtctgtcaaactaggt 1575 Query: 322 atcattgaagatgcaacaaacaggaaccg 350 |||||||| ||||| | ||||||||||| Sbjct: 1576 atcattgaggatgctgctaacaggaaccg 1604
>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds Length = 2674 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 501 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1736 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcctg 1795 Query: 502 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 561 ||| ||| | |||||| ||| ||||| |||| |||||| ||||| || ||||| ||| Sbjct: 1796 gagaggctcatcaagaagggctatgaggtcatcttcttcacagacccagttgatgaatac 1855 Query: 562 ctgatgcaatacctcatggactacg 586 ||||||||||||| ||||| |||| Sbjct: 1856 ttgatgcaatacctgatggattacg 1880 Score = 79.8 bits (40), Expect = 9e-12 Identities = 153/188 (81%), Gaps = 2/188 (1%) Strand = Plus / Plus Query: 28 tgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttgactcagn 87 |||||| ||||| ||||| || ||||| | || || |||| |||| |||||||||| | Sbjct: 1321 tgaatttgatgagcttctgcctaagtatttgagtttcttgaagggtcttgttgactctg- 1379 Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 |||||||||| || |||||||| ||| |||||||||||||||| ||||| | ||||| Sbjct: 1380 acacattgcctctaaatgtatcaagag-aaatgcttcaacaacacagcagcttaaagaca 1438 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 || |||||||| || ||||| ||||| ||||| ||||| | || |||||||| || ||| Sbjct: 1439 attaagaagaagcttatccgaaaggcgcttgatatgatccgcaagcttgctgaagaagat 1498 Query: 208 cctgatga 215 |||||||| Sbjct: 1499 cctgatga 1506 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||| || || | || |||||||||||||||||||| || ||||| || || Sbjct: 1556 gagaagaagggtcaatacacaaaattctggaacgagtttggcaagtctgtcaaactaggt 1615 Query: 322 atcattgaagatgcaacaaacaggaaccg 350 |||||||| ||||| | ||||||||||| Sbjct: 1616 atcattgaggatgctgctaacaggaaccg 1644
>gb|L14594.1|CTRHSP90A Catharanthus roseus heat shock protein 90 mRNA, complete cds Length = 2670 Score = 109 bits (55), Expect = 1e-20 Identities = 256/323 (79%) Strand = Plus / Plus Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||| |||||||| || |||||||| || |||||||| ||| | || ||||| Sbjct: 1533 gagaagaagggtcagtatgcgaaattctggaatgaatttggcaagtcaattaaactgggt 1592 Query: 322 atcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattcgagagttcc 381 |||||||| ||||| | || || ||||| | ||||| ||||| | || |||||| | Sbjct: 1593 atcattgaggatgctgctaatagaaaccgcttggcaaaacttctccggtttgagagtaca 1652 Query: 382 aagtcagatggcaaacttgtctcccttgatgagtatatttcaaggatgaaatcagggcag 441 || ||||| || || ||| || || ||| | ||||| ||||| ||||| ||||| ||| Sbjct: 1653 aaatcagaggggaagcttacttcactagatcaatatatctcaagaatgaagtcaggacag 1712 Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcctt 501 || || ||||| ||| |||| |||| ||||| ||||| | ||||||||||| ||||| Sbjct: 1713 aaagatatcttttacattaccggaacaagcaaagaacaattggagaaatctcctttcctc 1772 Query: 502 gagcagctaaccaagaaaaactacgaggttatctacttcaccgaccccgtggatgagtac 561 ||| ||| || |||||||| || ||||||||| |||||| ||||| || ||||||||| Sbjct: 1773 gagaggcttacaaagaaaaattatgaggttatcctcttcacagacccagtcgatgagtac 1832 Query: 562 ctgatgcaatacctcatggacta 584 ||||||||||| || |||||||| Sbjct: 1833 ctgatgcaatatctaatggacta 1855 Score = 42.1 bits (21), Expect = 2.0 Identities = 94/116 (81%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 22 ctctgntgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttga 81 ||||| |||||| ||||| ||| | ||||| || |||| |||||||| |||| ||||||| Sbjct: 1292 ctctgatgaatttgatgaacttttgccaaaatatctcaactttttgaagggtcttgttga 1351 Query: 82 ctcagnacacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcag 137 || | | || ||||| || |||||||| ||| ||||||| || ||||||||||| Sbjct: 1352 ttctg-ataccttgccacttaatgtatcgagag-aaatgctccagcaacatagcag 1405
>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds Length = 2947 Score = 101 bits (51), Expect = 3e-18 Identities = 157/190 (82%), Gaps = 2/190 (1%) Strand = Plus / Plus Query: 28 tgaattcgatgatcttcttccaaagtacctcagctttttgatgggtattgttgactcagn 87 |||||| || || ||||| || |||||| | ||||||||||||||| | |||||||| | Sbjct: 1290 tgaatttgacgaacttctccccaagtacttgagctttttgatgggtctcgttgactc-gg 1348 Query: 88 acacattgcccctcaatgtatcccgagnaaatgcttcaacaacatagcagtctgaagacc 147 | ||| | || || |||||||| ||| | ||||||||||| |||||||| |||||||| Sbjct: 1349 atacacttccactgaatgtatcaagag-agatgcttcaacagcatagcagcctgaagaca 1407 Query: 148 atcaagaagaaactgatccgcaaggctcttgacatgattaggaaacttgctgaggaggat 207 || ||||||||| |||| || || |||||||| |||||||| ||| ||||||| || ||| Sbjct: 1408 attaagaagaaattgatacgtaaagctcttgatatgattagaaaaattgctgatgaagat 1467 Query: 208 cctgatgagt 217 |||||||||| Sbjct: 1468 cctgatgagt 1477 Score = 99.6 bits (50), Expect = 1e-17 Identities = 131/158 (82%) Strand = Plus / Plus Query: 427 atgaaatcagggcagaaggacatcttctaccttacaggaagcagcaaggaacagctagag 486 |||||| | |||||||||||||| |||||| | || |||| |||||| || ||||||||| Sbjct: 1681 atgaaacctgggcagaaggacattttctacttaactggaaccagcaaagagcagctagag 1740 Query: 487 aaatctccattccttgagcagctaaccaagaaaaactacgaggttatctacttcaccgac 546 |||||||||||||||||| ||| | ||||| |||| ||||| || | |||||| ||| Sbjct: 1741 aaatctccattccttgaggggcttaagaagaaggactatgaggtcattttcttcactgac 1800 Query: 547 cccgtggatgagtacctgatgcaatacctcatggacta 584 || || |||||||| ||||||||||| | |||||||| Sbjct: 1801 ccagttgatgagtatttgatgcaatacttgatggacta 1838
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 500 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 77251 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 77193 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 286 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 345 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 77491 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 77432 Query: 346 aaccg 350 ||||| Sbjct: 77431 aaccg 77427 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Minus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 77089 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 77030
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 500 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3889 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 3831 Score = 75.8 bits (38), Expect = 1e-10 Identities = 121/146 (82%), Gaps = 2/146 (1%) Strand = Plus / Minus Query: 70 gggtattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaacaa 129 |||| |||||||||| | |||||||||| || |||||||| ||| |||||||||||||| Sbjct: 4466 gggtcttgttgactctg-acacattgcctctaaatgtatcaagag-aaatgcttcaacaa 4409 Query: 130 catagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattagg 189 || ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | Sbjct: 4408 cacagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgc 4349 Query: 190 aaacttgctgaggaggatcctgatga 215 || |||||||| || ||||||||||| Sbjct: 4348 aagcttgctgaagaagatcctgatga 4323 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 286 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 345 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 4129 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 4070 Query: 346 aaccg 350 ||||| Sbjct: 4069 aaccg 4065 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Minus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 3727 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 3668
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 500 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 20546 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 20488 Score = 75.8 bits (38), Expect = 1e-10 Identities = 121/146 (82%), Gaps = 2/146 (1%) Strand = Plus / Minus Query: 70 gggtattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaacaa 129 |||| |||||||||| | |||||||||| || |||||||| ||| |||||||||||||| Sbjct: 21123 gggtcttgttgactctg-acacattgcctctaaatgtatcaagag-aaatgcttcaacaa 21066 Query: 130 catagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattagg 189 || ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | Sbjct: 21065 cacagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgc 21006 Query: 190 aaacttgctgaggaggatcctgatga 215 || |||||||| || ||||||||||| Sbjct: 21005 aagcttgctgaagaagatcctgatga 20980 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 286 ttctggaacgagtttggcaaatcagtcaagctgggaatcattgaagatgcaacaaacagg 345 |||||||||||||||||||| || ||||| || || |||||||| ||||| | |||||| Sbjct: 20786 ttctggaacgagtttggcaagtctgtcaaactaggtatcattgaggatgctgctaacagg 20727 Query: 346 aaccg 350 ||||| Sbjct: 20726 aaccg 20722 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Minus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 20384 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 20325
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 500 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 375 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||| || || | || |||||||||||||||||||| || ||||| || || Sbjct: 53 gagaagaagggtcaatacacaaaattctggaacgagtttggcaagtctgtcaaactaggt 112 Query: 322 atcattgaagatgcaacaaacaggaaccg 350 |||||||| ||||| | ||||||||||| Sbjct: 113 atcattgaggatgctgctaacaggaaccg 141 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 479 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 538
>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds Length = 6679 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 442 aaggacatcttctaccttacaggaagcagcaaggaacagctagagaaatctccattcct 500 |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4602 aaggacatattttacatcacaggaagcagcaaggaacagctagagaaatctccattcct 4660 Score = 75.8 bits (38), Expect = 1e-10 Identities = 121/146 (82%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 70 gggtattgttgactcagnacacattgcccctcaatgtatcccgagnaaatgcttcaacaa 129 |||| |||||||||| | |||||||||| || |||||||| ||| |||||||||||||| Sbjct: 4025 gggtcttgttgactctg-acacattgcctctaaatgtatcaagag-aaatgcttcaacaa 4082 Query: 130 catagcagtctgaagaccatcaagaagaaactgatccgcaaggctcttgacatgattagg 189 || ||||| | ||||| || |||||||| || ||||| ||||| ||||| ||||| | Sbjct: 4083 cacagcagcttaaagacaattaagaagaagcttatccgaaaggcgcttgatatgatccgc 4142 Query: 190 aaacttgctgaggaggatcctgatga 215 || |||||||| || ||||||||||| Sbjct: 4143 aagcttgctgaagaagatcctgatga 4168 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 gagaagaagggccagtatgccaagttctggaacgagtttggcaaatcagtcaagctggga 321 ||||||||||| || || | || |||||||||||||||||||| || ||||| || || Sbjct: 4338 gagaagaagggtcaatacacaaaattctggaacgagtttggcaagtctgtcaaactaggt 4397 Query: 322 atcattgaagatgcaacaaacaggaaccg 350 |||||||| ||||| | ||||||||||| Sbjct: 4398 atcattgaggatgctgctaacaggaaccg 4426 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatggactacg 586 |||| |||| |||||| ||||| || ||||| ||| ||||||||||||| ||||| |||| Sbjct: 4764 aggtcatcttcttcacagacccagttgatgaatacttgatgcaatacctgatggattacg 4823
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 56.0 bits (28), Expect = 1e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 102 aatgtatcccgagnaaatgcttcaacaacatagcagtctgaagaccatcaagaagaaact 161 |||||||| |||| |||||||||||||||| || ||||||||||| || || |||||||| Sbjct: 78978 aatgtatcacgag-aaatgcttcaacaacacagtagtctgaagacaataaaaaagaaact 79036 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 527 aggttatctacttcaccgaccccgtggatgagtacctgatgcaatacctcatgga 581 ||||||| | |||||| ||||| || ||||| ||| ||||||||||||| ||||| Sbjct: 79741 aggttattttcttcactgacccagttgatgaatacttgatgcaatacctgatgga 79795 Score = 40.1 bits (20), Expect = 8.0 Identities = 80/100 (80%) Strand = Plus / Plus Query: 406 cttgatgagtatatttcaaggatgaaatcagggcagaaggacatcttctaccttacagga 465 |||||| |||| || || || |||||| | || |||||||| ||||| ||| | || ||| Sbjct: 79518 cttgatcagtacatatctagaatgaaagctggacagaaggatatcttttacataactgga 79577 Query: 466 agcagcaaggaacagctagagaaatctccattccttgagc 505 | |||||| ||||| || || || || ||||||||||||| Sbjct: 79578 accagcaaagaacaactggaaaattcaccattccttgagc 79617 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 ccaagttctggaacgagtttggcaaatc 308 ||||||||||||| |||||||| ||||| Sbjct: 79297 ccaagttctggaatgagtttggaaaatc 79324
>gb|AF239931.1|AF239931 Euphorbia esula putative heat-shock protein 90 mRNA, partial cds Length = 1207 Score = 56.0 bits (28), Expect = 1e-04 Identities = 108/132 (81%), Gaps = 2/132 (1%) Strand = Plus / Plus Query: 322 atcattgaagatgcaacaaacaggaaccgtcttgcaaagcttctgagattcgagagttcc 381 ||||||||||| ||||| ||||| ||||| | ||||| ||||| ||||| ||||| || Sbjct: 87 atcattgaagacgcaactaacagaaaccgcttagcaaaacttctcagatttgagagctca 146 Query: 382 aagtcagatggcaaacttgtc-tcccttgatgagtatatttcaaggatgaaatcagggca 440 ||||| ||||| ||| ||| | || |||||| |||| || ||||| |||||||| ||||| Sbjct: 147 aagtccgatggtaaa-ttgacttcacttgatcagtacatctcaagaatgaaatctgggca 205 Query: 441 gaaggacatctt 452 ||||| ||||| Sbjct: 206 aaaggatatctt 217 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 537 cttcaccgaccccgtggatgagtacctgatgcaata 572 ||||||||| || || ||||| |||||||||||||| Sbjct: 302 cttcaccgatccagttgatgaatacctgatgcaata 337
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 275 agtatgccaagttctggaacgagtttgg 302 ||||||||||||||||||| |||||||| Sbjct: 1057346 agtatgccaagttctggaaagagtttgg 1057373 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 275 agtatgccaagttctggaacgagtttgg 302 ||||||||||||||||||| |||||||| Sbjct: 914314 agtatgccaagttctggaaagagtttgg 914341
>gb|AY769465.1| Stylonychia lemnae macronuclear development protein 53 (mdp53) mRNA, partial sequence Length = 529 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 436 gggcagaaggacatcttctaccttacagga 465 |||||||||||||||||||| |||||||| Sbjct: 431 gggcagaaggacatcttctatattacagga 460
>ref|XM_420430.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC422465), mRNA Length = 4608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 gaggagaagaagggccagtat 279 ||||||||||||||||||||| Sbjct: 4222 gaggagaagaagggccagtat 4242
>gb|AY236713.1| Goniomonas sp. ATCC 50108 heat shock protein 90 (Hsp90) gene, partial cds Length = 1661 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 525 cgaggttatctacttcaccgaccccgtggatgagtac 561 ||||||||||||| | ||||||||| | ||||||||| Sbjct: 1350 cgaggttatctacatgaccgaccccatcgatgagtac 1386
>gb|AC102613.7| Mus musculus chromosome 1, clone RP23-418C16, complete sequence Length = 201275 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 ttaggaaacttgctgaggaggatcc 209 |||||||||||||| |||||||||| Sbjct: 58469 ttaggaaacttgctcaggaggatcc 58493
>ref|XM_766368.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_190_49812_70631) partial mRNA Length = 20820 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 cttgctgaggaggatcctgat 213 ||||||||||||||||||||| Sbjct: 1177 cttgctgaggaggatcctgat 1197
>emb|AL354852.12| Human DNA sequence from clone RP11-115N13 on chromosome 13, complete sequence Length = 165882 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 tacagcaacaaagaaaagaca 237 ||||||||||||||||||||| Sbjct: 138416 tacagcaacaaagaaaagaca 138436
>gb|AC162861.2| Mus musculus chromosome 1, clone RP23-236B21, complete sequence Length = 151717 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ttaggaaacttgctgaggaggatcc 209 |||||||||||||| |||||||||| Sbjct: 51911 ttaggaaacttgctcaggaggatcc 51887
>gb|AC121333.5| Homo sapiens 3 BAC RP11-691G17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142378 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 agcaacaaagaaaagacagat 240 ||||||||||||||||||||| Sbjct: 30761 agcaacaaagaaaagacagat 30741
>gb|AC022031.8| Homo sapiens chromosome 18, clone RP11-397A16, complete sequence Length = 202566 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 acaaagaaaagacagatgatgaaaa 248 |||||||||| |||||||||||||| Sbjct: 166888 acaaagaaaaaacagatgatgaaaa 166912
>gb|CP000207.1| Drosophila melanogaster genomic scaffold 211000022280721 Length = 230078 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 tcgagagttccaagtcagatg 391 ||||||||||||||||||||| Sbjct: 79929 tcgagagttccaagtcagatg 79949
>gb|AC139130.10| Mus musculus chromosome 15, clone RP23-210B16, complete sequence Length = 198154 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 agctgggaatcattgaagat 333 |||||||||||||||||||| Sbjct: 61690 agctgggaatcattgaagat 61671
>gb|AC005610.1| Homo sapiens chromosome 5, PAC clone 502L6 (LBNL H156), complete sequence Length = 223408 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 acagcaacaaagaaaagaca 237 |||||||||||||||||||| Sbjct: 219807 acagcaacaaagaaaagaca 219788
>gb|AC158554.6| Mus musculus chromosome 15, clone RP23-353O17, complete sequence Length = 192019 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ggcaaacttgtctcccttga 410 |||||||||||||||||||| Sbjct: 117426 ggcaaacttgtctcccttga 117407
>gb|AC118414.9| Rattus norvegicus 3 BAC CH230-223K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 217330 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gatgggtattgttgactcag 86 |||||||||||||||||||| Sbjct: 66892 gatgggtattgttgactcag 66873
>ref|XM_750819.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g15770) partial mRNA Length = 1305 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 gaattcgatgatcttcttcc 48 |||||||||||||||||||| Sbjct: 760 gaattcgatgatcttcttcc 779
>gb|AF297464.1| Modoc virus NS3 protein gene, partial cds Length = 1071 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 agaaaaactacgaggttatc 534 |||||||||||||||||||| Sbjct: 644 agaaaaactacgaggttatc 663
>ref|XM_799049.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053507411.10) partial mRNA Length = 2787 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtacagcaacaaagaaaaga 235 |||||||||||||||||||| Sbjct: 1845 gtacagcaacaaagaaaaga 1864
>ref|XM_799314.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053508697.10) partial mRNA Length = 2787 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtacagcaacaaagaaaaga 235 |||||||||||||||||||| Sbjct: 1845 gtacagcaacaaagaaaaga 1864
>gb|AC112158.4| Mus musculus BAC clone RP24-116K14 from chromosome 15, complete sequence Length = 175171 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 gggcagaaggacatcttctacctt 459 ||||||||| |||||||||||||| Sbjct: 138007 gggcagaagaacatcttctacctt 138030
>gb|AC117644.6| Mus musculus chromosome 7, clone RP23-238L7, complete sequence Length = 217015 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 acagcaacaaagaaaagaca 237 |||||||||||||||||||| Sbjct: 68242 acagcaacaaagaaaagaca 68223
>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence Length = 202932 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gatgagtacagcaacaaaga 230 |||||||||||||||||||| Sbjct: 78400 gatgagtacagcaacaaaga 78419
>emb|AL592490.8| Human DNA sequence from clone RP11-432J3 on chromosome 13 Contains the 5' end of the PCDH20 gene for protocadherin 20 and a novel gene, complete sequence Length = 59272 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 tgtctcccttgatgagtatatttc 422 ||||||||||||||| |||||||| Sbjct: 28996 tgtctcccttgatgactatatttc 29019
>emb|AL031651.33|HS1054A22 Human DNA sequence from clone RP5-1054A22 on chromosome 20q11.22-12 Contains the TGM2 gene for transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase), the gene for a novel protein (KIAA1755), part of a novel gene and a CpG island, complete sequence Length = 166942 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tatttcaaggatgaaatcag 436 |||||||||||||||||||| Sbjct: 128162 tatttcaaggatgaaatcag 128181
>ref|XM_790892.1| PREDICTED: Strongylocentrotus purpuratus similar to Lysosomal alpha-mannosidase precursor (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) (LOC591324), mRNA Length = 3045 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 agacagatgatgaaaagagt 252 |||||||||||||||||||| Sbjct: 2269 agacagatgatgaaaagagt 2288
>emb|AJ242984.1|MVI242984 Modoc virus genomic RNA for polyprotein gene Length = 10600 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 agaaaaactacgaggttatc 534 |||||||||||||||||||| Sbjct: 5322 agaaaaactacgaggttatc 5341
>emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chromosome 11 Contains the 3' end of a novel gene, complete sequence Length = 203827 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcttgacatgattaggaaa 192 |||||||||||||||||||| Sbjct: 90661 ctcttgacatgattaggaaa 90680
>gb|AC060226.39| Homo sapiens 12 BAC RP11-101P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132604 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 acaggaagcagcaaggaaca 479 |||||||||||||||||||| Sbjct: 68182 acaggaagcagcaaggaaca 68201
>gb|AC161756.3| Mus musculus BAC clone RP24-106J5 from chromosome 16, complete sequence Length = 219500 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 cttacaggaagcagcaaggaacag 480 ||||||||||||||||||| |||| Sbjct: 7660 cttacaggaagcagcaaggcacag 7683
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 cttgctgaggaggatcctgatgag 216 ||||||||||||||| |||||||| Sbjct: 22776885 cttgctgaggaggatgctgatgag 22776862
>gb|AC140379.3| Mus musculus BAC clone RP24-215M3 from chromosome 10, complete sequence Length = 141034 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gatgagtacagcaacaaaga 230 |||||||||||||||||||| Sbjct: 140019 gatgagtacagcaacaaaga 140038
>dbj|AP004615.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0414C05 Length = 123105 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 cattgaagatgcaacaaaca 343 |||||||||||||||||||| Sbjct: 117488 cattgaagatgcaacaaaca 117507
>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012B02 Length = 149807 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 cattgaagatgcaacaaaca 343 |||||||||||||||||||| Sbjct: 4331 cattgaagatgcaacaaaca 4350
>gb|AC155307.2| Mus musculus BAC clone RP24-147F17 from 15, complete sequence Length = 190527 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 gggcagaaggacatcttctacctt 459 ||||||||| |||||||||||||| Sbjct: 91737 gggcagaagaacatcttctacctt 91714
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 cttgctgaggaggatcctgatgag 216 ||||||||||||||| |||||||| Sbjct: 22705076 cttgctgaggaggatgctgatgag 22705053
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131603 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 cttgctgaggaggatcctgatgag 216 ||||||||||||||| |||||||| Sbjct: 88735 cttgctgaggaggatgctgatgag 88712
>emb|AL929570.7| Mouse DNA sequence from clone RP23-74G9 on chromosome 2, complete sequence Length = 230193 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gatgagtatatttcaaggat 428 |||||||||||||||||||| Sbjct: 30302 gatgagtatatttcaaggat 30283 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,223,492 Number of Sequences: 3902068 Number of extensions: 6223492 Number of successful extensions: 132866 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 132515 Number of HSP's gapped (non-prelim): 331 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
