ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8f20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G03, full insert sequence Length = 1153 Score = 718 bits (362), Expect = 0.0 Identities = 528/582 (90%), Gaps = 1/582 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || |||||||| || || || |||||||||||||||||||| ||||| |||||| Sbjct: 284 aacttcgcagtgttcccgtcactgcaaggtggtcctcacaaccaccagattgcagccctt 343 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 344 gctgttgctctgcagcaaaccatgacacctgg-attcaaggcctacgcaaagcaggtcaa 402 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||||||||| ||| |||| |||||||| ||||||||||||||||| |||||||| || Sbjct: 403 ggccaacgctgtcgccattggcaagtatcttatgagcaagggctacaaaatggtgactga 462 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 463 tggaactgagaaccaccttgttctctgggatcttcgccctcttggcttgactggcaacaa 522 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtga 300 ||| || ||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| Sbjct: 523 ggttgagaagatgtgtgacctttgcagcattacacttaacaagaatgctgtctttggtga 582 Query: 301 cagcagtgcattgtccccgggtggtgtccgcattggtgctcctgctatgacctccagggg 360 ||||||||||||| | || || ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 583 cagcagtgcattggctcctggcggtgtccgcattggtactcctgcgatgacatccagggg 642 Query: 361 tctggttgagaaggacttcgagcagatcgccgagttcctccaccaggcagtgaccatctg 420 ||| || ||||||||||| |||||||||| |||||||||||||||||| ||||||||||| Sbjct: 643 tcttgtcgagaaggactttgagcagatcggcgagttcctccaccaggccgtgaccatctg 702 Query: 421 cctgaacatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaa 480 ||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 703 cctcaacatccagaaggagcacggcaagctcctcaaggacttctccaagggcctggtgaa 762 Query: 481 caacaaggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacat 540 |||||||||||| |||||||||||| | |||||||||||||| ||| |||||| ||||| Sbjct: 763 caacaaggacatcgagaacctcaagctggaggtcgagaagttcgccacctccttcgacat 822 Query: 541 gcccggcttcacgctcgagagcatgaagtacaaggagtagga 582 |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 823 gcccggcttcaccctcgacagcatgaagtacaaggagtagga 864
>dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N02, full insert sequence Length = 1896 Score = 718 bits (362), Expect = 0.0 Identities = 528/582 (90%), Gaps = 1/582 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || |||||||| || || || |||||||||||||||||||| ||||| |||||| Sbjct: 919 aacttcgcagtgttcccgtcactgcaaggtggtcctcacaaccaccagattgcagccctt 978 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 979 gctgttgctctgcagcaaaccatgacacctgg-attcaaggcctacgcaaagcaggtcaa 1037 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||||||||| ||| |||| |||||||| ||||||||||||||||| |||||||| || Sbjct: 1038 ggccaacgctgtcgccattggcaagtatcttatgagcaagggctacaaaatggtgactga 1097 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1098 tggaactgagaaccaccttgttctctgggatcttcgccctcttggcttgactggcaacaa 1157 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtga 300 ||| || ||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| Sbjct: 1158 ggttgagaagatgtgtgacctttgcagcattacacttaacaagaatgctgtctttggtga 1217 Query: 301 cagcagtgcattgtccccgggtggtgtccgcattggtgctcctgctatgacctccagggg 360 ||||||||||||| | || || ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1218 cagcagtgcattggctcctggcggtgtccgcattggtactcctgcgatgacatccagggg 1277 Query: 361 tctggttgagaaggacttcgagcagatcgccgagttcctccaccaggcagtgaccatctg 420 ||| || ||||||||||| |||||||||| |||||||||||||||||| ||||||||||| Sbjct: 1278 tcttgtcgagaaggactttgagcagatcggcgagttcctccaccaggccgtgaccatctg 1337 Query: 421 cctgaacatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaa 480 ||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1338 cctcaacatccagaaggagcacggcaagctcctcaaggacttctccaagggcctggtgaa 1397 Query: 481 caacaaggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacat 540 |||||||||||| |||||||||||| | |||||||||||||| ||| |||||| ||||| Sbjct: 1398 caacaaggacatcgagaacctcaagctggaggtcgagaagttcgccacctccttcgacat 1457 Query: 541 gcccggcttcacgctcgagagcatgaagtacaaggagtagga 582 |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1458 gcccggcttcaccctcgacagcatgaagtacaaggagtagga 1499
>dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100I04, full insert sequence Length = 1811 Score = 718 bits (362), Expect = 0.0 Identities = 528/582 (90%), Gaps = 1/582 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || |||||||| || || || |||||||||||||||||||| ||||| |||||| Sbjct: 919 aacttcgcagtgttcccgtcactgcaaggtggtcctcacaaccaccagattgcagccctt 978 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 979 gctgttgctctgcagcaaaccatgacacctgg-attcaaggcctacgcaaagcaggtcaa 1037 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||||||||| ||| |||| |||||||| ||||||||||||||||| |||||||| || Sbjct: 1038 ggccaacgctgtcgccattggcaagtatcttatgagcaagggctacaaaatggtgactga 1097 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1098 tggaactgagaaccaccttgttctctgggatcttcgccctcttggcttgactggcaacaa 1157 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtga 300 ||| || ||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| Sbjct: 1158 ggttgagaagatgtgtgacctttgcagcattacacttaacaagaatgctgtctttggtga 1217 Query: 301 cagcagtgcattgtccccgggtggtgtccgcattggtgctcctgctatgacctccagggg 360 ||||||||||||| | || || ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1218 cagcagtgcattggctcctggcggtgtccgcattggtactcctgcgatgacatccagggg 1277 Query: 361 tctggttgagaaggacttcgagcagatcgccgagttcctccaccaggcagtgaccatctg 420 ||| || ||||||||||| |||||||||| |||||||||||||||||| ||||||||||| Sbjct: 1278 tcttgtcgagaaggactttgagcagatcggcgagttcctccaccaggccgtgaccatctg 1337 Query: 421 cctgaacatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaa 480 ||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1338 cctcaacatccagaaggagcacggcaagctcctcaaggacttctccaagggcctggtgaa 1397 Query: 481 caacaaggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacat 540 |||||||||||| |||||||||||| | |||||||||||||| ||| |||||| ||||| Sbjct: 1398 caacaaggacatcgagaacctcaagctggaggtcgagaagttcgccacctccttcgacat 1457 Query: 541 gcccggcttcacgctcgagagcatgaagtacaaggagtagga 582 |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1458 gcccggcttcaccctcgacagcatgaagtacaaggagtagga 1499
>dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C10, full insert sequence Length = 1811 Score = 710 bits (358), Expect = 0.0 Identities = 527/582 (90%), Gaps = 1/582 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || |||||||| || || || |||||||||||||||||||| ||||| |||||| Sbjct: 918 aacttcgcagtgttcccgtcactgcaaggtggtcctcacaaccaccagattgcagccctt 977 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 978 gctgttgctctgcagcaaaccatgacacctgg-attcaaggcctacgcaaagcaggtcaa 1036 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||||||||| ||| |||| |||||||| ||||||||||||||||| |||||||| || Sbjct: 1037 ggccaacgctgtcgccattggcaagtatcttatgagcaagggctacaaaatggtgactga 1096 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1097 tggaactgagaaccaccttgttctctgggatcttcgccctcttggcttgactggcaacaa 1156 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtga 300 ||| || ||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| Sbjct: 1157 ggttgagaagatgtgtgacctttgcagcattacacttaacaagaatgctgtctttggtga 1216 Query: 301 cagcagtgcattgtccccgggtggtgtccgcattggtgctcctgctatgacctccagggg 360 ||||||||||||| | || || ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1217 cagcagtgcattggctcctggcggtgtccgcattggtactcctgcgatgacatccagggg 1276 Query: 361 tctggttgagaaggacttcgagcagatcgccgagttcctccaccaggcagtgaccatctg 420 ||| || ||||||||||| |||||||||| |||||||||||||||||| ||||||||||| Sbjct: 1277 tcttgtcgagaaggactttgagcagatcggcgagttcctccaccaggccgtgaccatctg 1336 Query: 421 cctgaacatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaa 480 ||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1337 cctcaacatccagaaggagcacggcaagctcctcaaggacttctccaagggcctggtgaa 1396 Query: 481 caacaaggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacat 540 |||||||||| | |||||||||||| | |||||||||||||| ||| |||||| ||||| Sbjct: 1397 caacaaggacgtcgagaacctcaagctggaggtcgagaagttcgccacctccttcgacat 1456 Query: 541 gcccggcttcacgctcgagagcatgaagtacaaggagtagga 582 |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1457 gcccggcttcaccctcgacagcatgaagtacaaggagtagga 1498
>gb|AY105338.1| Zea mays PCO102700 mRNA sequence Length = 1951 Score = 660 bits (333), Expect = 0.0 Identities = 519/580 (89%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| ||||||||||| ||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 1046 aactttgcagtgttcccatctctccaaggtggccctcacaaccaccagattgctgcactt 1105 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| || |||||||| || | ||||| ||||||||||| |||||||| || || Sbjct: 1106 gctgttgctctacagcaaactatgtcgcctggc-ttcaaggcctatgcaaagcaagtgaa 1164 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1165 ggccaatgctgttgcaattggaaactatctcatgagcaagggctacaagatggtgactga 1224 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1225 tggaactgagaaccaccttgttctctgggatctccgcccccttggcttgactggaaacaa 1284 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtga 300 |||||||||| | ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 1285 ggtcgaaaagctatgtgatctttgccacatcacattgaacaagaatgctgtcttcggtga 1344 Query: 301 cagcagtgcattgtccccgggtggtgtccgcattggtgctcctgctatgacctccagggg 360 ||||||||||||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 1345 cagcagtgcattgtctccgggtggtgtccgcattggcgcgccagcaatgacctcgagggg 1404 Query: 361 tctggttgagaaggacttcgagcagatcgccgagttcctccaccaggcagtgaccatctg 420 ||| | |||||||| ||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1405 tctactggagaaggatttcgagcagattggggagttcctccaccaggcagtgaccatctg 1464 Query: 421 cctgaacatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaa 480 ||||||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||| Sbjct: 1465 cctgaacatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaa 1524 Query: 481 caacaaggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacat 540 |||||||||||| ||||||||||||||| |||| |||||||||||| |||||| ||||| Sbjct: 1525 caacaaggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacat 1584 Query: 541 gcccggcttcacgctcgagagcatgaagtacaaggagtag 580 ||| || |||||||| ||||||||||| |||||||||||| Sbjct: 1585 gcctgggttcacgcttgagagcatgaaatacaaggagtag 1624
>emb|AJ000226.1|HVJ000226 Hordeum vulgare mRNA for expressed sequence tag Length = 334 Score = 654 bits (330), Expect = 0.0 Identities = 333/334 (99%) Strand = Plus / Plus Query: 242 gtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgac 60 Query: 302 agcagtgcattgtccccgggtggtgtccgcattggtgctcctgctatgacctccaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcagtgcattgtccccgggtggtgtccgcattggtgctcctgctatgacctccaggggt 120 Query: 362 ctggttgagaaggacttcgagcagatcgccgagttcctccaccaggcagtgaccatctgc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctggttgagaaggacttcgagcagatcgccgagttcctccaccaggcagtgaccatctgc 180 Query: 422 ctgaacatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctgaacatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaac 240 Query: 482 aacaaggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatg 541 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 241 aacaaggacattgagaacctcaaggtcgaggttgagaagtttgccctctcctttgacatg 300 Query: 542 cccggcttcacgctcgagagcatgaagtacaagg 575 |||||||||||||||||||||||||||||||||| Sbjct: 301 cccggcttcacgctcgagagcatgaagtacaagg 334
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 333 bits (168), Expect = 4e-88 Identities = 225/244 (92%) Strand = Plus / Plus Query: 339 ctcctgctatgacctccaggggtctggttgagaaggacttcgagcagatcgccgagttcc 398 ||||||| ||||| ||||||||||| || ||||||||||| |||||||||| |||||||| Sbjct: 86507 ctcctgcgatgacatccaggggtcttgtcgagaaggactttgagcagatcggcgagttcc 86566 Query: 399 tccaccaggcagtgaccatctgcctgaacatccagaaggagcacgggaagctgctcaagg 458 |||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 86567 tccaccaggccgtgaccatctgcctcaacatccagaaggagcacggcaagctcctcaagg 86626 Query: 459 acttctccaagggcctggtgaacaacaaggacattgagaacctcaaggtcgaggtcgaga 518 |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| Sbjct: 86627 acttctccaagggcctggtgaacaacaaggacatcgagaacctcaagctggaggtcgaga 86686 Query: 519 agtttgccctctcctttgacatgcccggcttcacgctcgagagcatgaagtacaaggagt 578 |||| ||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 86687 agttcgccacctccttcgacatgcccggcttcaccctcgacagcatgaagtacaaggagt 86746 Query: 579 agga 582 |||| Sbjct: 86747 agga 86750 Score = 274 bits (138), Expect = 3e-70 Identities = 211/234 (90%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || |||||||| || || || |||||||||||||||||||| ||||| |||||| Sbjct: 85810 aacttcgcagtgttcccgtcactgcaaggtggtcctcacaaccaccagattgcagccctt 85869 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 85870 gctgttgctctgcagcaaaccatgacacctgg-attcaaggcctacgcaaagcaggtcaa 85928 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||||||||| ||| |||| |||||||| ||||||||||||||||| |||||||| || Sbjct: 85929 ggccaacgctgtcgccattggcaagtatcttatgagcaagggctacaaaatggtgactga 85988 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactgg 234 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 85989 tggaactgagaaccaccttgttctctgggatcttcgccctcttggcttgactgg 86042 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 236 aacaaggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttc 295 |||||||| || ||||||||||||||||| ||||||||| | ||||||||||||||||| Sbjct: 86137 aacaaggttgagaagatgtgtgacctttgcagcattacacttaacaagaatgctgtcttt 86196 Query: 296 ggtgacagcagtgcattgtccccgggtggtgtccgcattggtg 338 |||||||||||||||||| | || || |||||||||||||||| Sbjct: 86197 ggtgacagcagtgcattggctcctggcggtgtccgcattggtg 86239
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 333 bits (168), Expect = 4e-88 Identities = 225/244 (92%) Strand = Plus / Plus Query: 339 ctcctgctatgacctccaggggtctggttgagaaggacttcgagcagatcgccgagttcc 398 ||||||| ||||| ||||||||||| || ||||||||||| |||||||||| |||||||| Sbjct: 14863441 ctcctgcgatgacatccaggggtcttgtcgagaaggactttgagcagatcggcgagttcc 14863500 Query: 399 tccaccaggcagtgaccatctgcctgaacatccagaaggagcacgggaagctgctcaagg 458 |||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 14863501 tccaccaggccgtgaccatctgcctcaacatccagaaggagcacggcaagctcctcaagg 14863560 Query: 459 acttctccaagggcctggtgaacaacaaggacattgagaacctcaaggtcgaggtcgaga 518 |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| Sbjct: 14863561 acttctccaagggcctggtgaacaacaaggacatcgagaacctcaagctggaggtcgaga 14863620 Query: 519 agtttgccctctcctttgacatgcccggcttcacgctcgagagcatgaagtacaaggagt 578 |||| ||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 14863621 agttcgccacctccttcgacatgcccggcttcaccctcgacagcatgaagtacaaggagt 14863680 Query: 579 agga 582 |||| Sbjct: 14863681 agga 14863684 Score = 274 bits (138), Expect = 3e-70 Identities = 211/234 (90%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || |||||||| || || || |||||||||||||||||||| ||||| |||||| Sbjct: 14862744 aacttcgcagtgttcccgtcactgcaaggtggtcctcacaaccaccagattgcagccctt 14862803 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 14862804 gctgttgctctgcagcaaaccatgacacctgg-attcaaggcctacgcaaagcaggtcaa 14862862 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||||||||| ||| |||| |||||||| ||||||||||||||||| |||||||| || Sbjct: 14862863 ggccaacgctgtcgccattggcaagtatcttatgagcaagggctacaaaatggtgactga 14862922 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactgg 234 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 14862923 tggaactgagaaccaccttgttctctgggatcttcgccctcttggcttgactgg 14862976 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 236 aacaaggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttc 295 |||||||| || ||||||||||||||||| ||||||||| | ||||||||||||||||| Sbjct: 14863071 aacaaggttgagaagatgtgtgacctttgcagcattacacttaacaagaatgctgtcttt 14863130 Query: 296 ggtgacagcagtgcattgtccccgggtggtgtccgcattggtg 338 |||||||||||||||||| | || || |||||||||||||||| Sbjct: 14863131 ggtgacagcagtgcattggctcctggcggtgtccgcattggtg 14863173
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 333 bits (168), Expect = 4e-88 Identities = 225/244 (92%) Strand = Plus / Plus Query: 339 ctcctgctatgacctccaggggtctggttgagaaggacttcgagcagatcgccgagttcc 398 ||||||| ||||| ||||||||||| || ||||||||||| |||||||||| |||||||| Sbjct: 14943408 ctcctgcgatgacatccaggggtcttgtcgagaaggactttgagcagatcggcgagttcc 14943467 Query: 399 tccaccaggcagtgaccatctgcctgaacatccagaaggagcacgggaagctgctcaagg 458 |||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 14943468 tccaccaggccgtgaccatctgcctcaacatccagaaggagcacggcaagctcctcaagg 14943527 Query: 459 acttctccaagggcctggtgaacaacaaggacattgagaacctcaaggtcgaggtcgaga 518 |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| Sbjct: 14943528 acttctccaagggcctggtgaacaacaaggacatcgagaacctcaagctggaggtcgaga 14943587 Query: 519 agtttgccctctcctttgacatgcccggcttcacgctcgagagcatgaagtacaaggagt 578 |||| ||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 14943588 agttcgccacctccttcgacatgcccggcttcaccctcgacagcatgaagtacaaggagt 14943647 Query: 579 agga 582 |||| Sbjct: 14943648 agga 14943651 Score = 274 bits (138), Expect = 3e-70 Identities = 211/234 (90%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || |||||||| || || || |||||||||||||||||||| ||||| |||||| Sbjct: 14942711 aacttcgcagtgttcccgtcactgcaaggtggtcctcacaaccaccagattgcagccctt 14942770 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 14942771 gctgttgctctgcagcaaaccatgacacctgg-attcaaggcctacgcaaagcaggtcaa 14942829 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||||||||| ||| |||| |||||||| ||||||||||||||||| |||||||| || Sbjct: 14942830 ggccaacgctgtcgccattggcaagtatcttatgagcaagggctacaaaatggtgactga 14942889 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactgg 234 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 14942890 tggaactgagaaccaccttgttctctgggatcttcgccctcttggcttgactgg 14942943 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 236 aacaaggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttc 295 |||||||| || ||||||||||||||||| ||||||||| | ||||||||||||||||| Sbjct: 14943038 aacaaggttgagaagatgtgtgacctttgcagcattacacttaacaagaatgctgtcttt 14943097 Query: 296 ggtgacagcagtgcattgtccccgggtggtgtccgcattggtg 338 |||||||||||||||||| | || || |||||||||||||||| Sbjct: 14943098 ggtgacagcagtgcattggctcctggcggtgtccgcattggtg 14943140
>dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L02, full insert sequence Length = 1944 Score = 321 bits (162), Expect = 2e-84 Identities = 436/526 (82%), Gaps = 1/526 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || ||||| || |||||||| || || ||||||||||||||||||||||| || Sbjct: 1116 aacttcgcagtgtttccgtcgctccaagggggccctcacaaccaccaaattgctgcgcta 1175 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || |||| ||||||| ||| || ||||||| ||||||| | || ||||||||||| Sbjct: 1176 gcggttggtttgaagcagactatgtcacctgg-attcaagtcttatattaagcaggtcaa 1234 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||| ||||||||| |||| || || | ||||| ||||||||||| |||| || || Sbjct: 1235 ggccaatgctgttgcccttggtaaccatttgatgagtaagggctacaaattggttactga 1294 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||| || ||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1295 cggaacagagaaccatcttgttctctgggatctgcgccctcttggcttgactggtaacaa 1354 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtga 300 || || ||| | ||||| | || ||||||||| ||||||| ||||||||||| || || Sbjct: 1355 agttgagaaggtctgtgatttgtgcagcattacactgaacaaaaatgctgtctttgggga 1414 Query: 301 cagcagtgcattgtccccgggtggtgtccgcattggtgctcctgctatgacctccagggg 360 ||||||||| |||| || |||||||||||||||||| | ||||| ||||| || ||||| Sbjct: 1415 tagcagtgcaatgtcacctggtggtgtccgcattggtacacctgccatgacatcaagggg 1474 Query: 361 tctggttgagaaggacttcgagcagatcgccgagttcctccaccaggcagtgaccatctg 420 | |||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 1475 tttggtagaggaggactttgtacagatcgccgagttccttcaccaggcagtgaccatctg 1534 Query: 421 cctgaacatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaa 480 | || | | |||||||||| || ||||| |||||| ||||| | ||||||||| ||| Sbjct: 1535 cttggatgttcagaaggagcgtggcaagcttctcaagtacttcaacgagggcctggagaa 1594 Query: 481 caacaaggacattgagaacctcaaggtcgaggtcgagaagtttgcc 526 |||||||||||||||| |||||| || ||||| |||||||||||| Sbjct: 1595 caacaaggacattgaggacctcagggcggaggtggagaagtttgcc 1640
>gb|AF498509.1| Zea mays cultivar DE811 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 190 bits (96), Expect = 4e-45 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| ||||||| |||||||||||| Sbjct: 375 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcntggtgaacaaca 316 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||||||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 315 aggacattgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 256 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 255 ggttcacgcttgagagcatgaaatacaaggagtag 221
>gb|AF498521.1| Zea mays cultivar C_9 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 375 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 316 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 315 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 256 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 255 ggttcacgcttgagagcatgaaatacaaggagtag 221
>gb|AF498520.1| Zea mays cultivar F_7 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 374 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 315 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 314 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 255 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 254 ggttcacgcttgagagcatgaaatacaaggagtag 220
>gb|AF498519.1| Zea mays cultivar D_9 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 375 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 316 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 315 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 256 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 255 ggttcacgcttgagagcatgaaatacaaggagtag 221
>gb|AF498518.1| Zea mays cultivar D_6 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 375 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 316 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 315 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 256 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 255 ggttcacgcttgagagcatgaaatacaaggagtag 221
>gb|AF498517.1| Zea mays cultivar F_1 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 375 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 316 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 315 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 256 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 255 ggttcacgcttgagagcatgaaatacaaggagtag 221
>gb|AF498516.1| Zea mays cultivar Mo17 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 374 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 315 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 314 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 255 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 254 ggttcacgcttgagagcatgaaatacaaggagtag 220
>gb|AF498515.1| Zea mays cultivar D_7 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 369 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 369 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 310 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 309 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 250 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 249 ggttcacgcttgagagcatgaaatacaaggagtag 215
>gb|AF498514.1| Zea mays cultivar Wf9Ht hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 376 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 317 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 316 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 257 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 256 ggttcacgcttgagagcatgaaatacaaggagtag 222
>gb|AF498510.1| Zea mays cultivar H60 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 369 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 369 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 310 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 309 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 250 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 249 ggttcacgcttgagagcatgaaatacaaggagtag 215
>gb|AF498508.1| Zea mays cultivar 684 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 376 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 317 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 316 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 257 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 256 ggttcacgcttgagagcatgaaatacaaggagtag 222
>gb|AF498507.1| Zea mays cultivar D71-4HT hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 366 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 366 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 307 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 306 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 247 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 246 ggttcacgcttgagagcatgaaatacaaggagtag 212
>gb|AF498506.1| Zea mays cultivar H99 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 371 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 371 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 312 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 311 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 252 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 251 ggttcacgcttgagagcatgaaatacaaggagtag 217
>gb|AF498505.1| Zea mays cultivar CO109 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 371 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 371 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 312 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 311 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 252 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 251 ggttcacgcttgagagcatgaaatacaaggagtag 217
>gb|AF498504.1| Zea mays cultivar I_1 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 375 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 316 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 315 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 256 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 255 ggttcacgcttgagagcatgaaatacaaggagtag 221
>gb|AF498503.1| Zea mays cultivar B73 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 376 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 317 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 316 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 257 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 256 ggttcacgcttgagagcatgaaatacaaggagtag 222
>gb|AF498502.1| Zea mays cultivar F_2 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 376 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 317 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 316 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 257 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 256 ggttcacgcttgagagcatgaaatacaaggagtag 222
>gb|AF498501.1| Zea mays cultivar G_1 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 372 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 372 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 313 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 312 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 253 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 252 ggttcacgcttgagagcatgaaatacaaggagtag 218
>gb|AF498500.1| Zea mays cultivar B_6 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 374 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 315 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 314 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 255 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 254 ggttcacgcttgagagcatgaaatacaaggagtag 220
>gb|AF498499.1| Zea mays cultivar H_4 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 369 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 369 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 310 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 309 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 250 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 249 ggttcacgcttgagagcatgaaatacaaggagtag 215
>gb|AF498498.1| Zea mays cultivar F_4 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 375 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 316 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 315 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 256 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 255 ggttcacgcttgagagcatgaaatacaaggagtag 221
>gb|AF498497.1| Zea mays cultivar F_3 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 376 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 317 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 316 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 257 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 256 ggttcacgcttgagagcatgaaatacaaggagtag 222
>gb|AF498496.1| Zea mays cultivar F_5 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 373 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 373 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 314 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 313 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 254 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 253 ggttcacgcttgagagcatgaaatacaaggagtag 219
>gb|AF498495.1| Zea mays cultivar H_5 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 374 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 315 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 314 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 255 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 254 ggttcacgcttgagagcatgaaatacaaggagtag 220
>gb|AF498492.1| Zea mays cultivar 647 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 366 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 366 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcctggtgaacaaca 307 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 306 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 247 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 246 ggttcacgcttgagagcatgaaatacaaggagtag 212
>gb|AF498511.1| Zea mays cultivar B84 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 182 bits (92), Expect = 9e-43 Identities = 139/155 (89%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||||||||| |||| ||||| |||||||||||| ||||||| |||||||||||| Sbjct: 376 acatccagaaggagtacggcaagctcctcaaggacttcaacaagggcntggtgaacaaca 317 Query: 486 aggacattgagaacctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccg 545 ||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||||| | Sbjct: 316 aggacatcgagaacctcaaggtccaggtggagaagtttgccgactccttcgacatgcctg 257 Query: 546 gcttcacgctcgagagcatgaagtacaaggagtag 580 | |||||||| ||||||||||| |||||||||||| Sbjct: 256 ggttcacgcttgagagcatgaaatacaaggagtag 222
>ref|NM_117467.2| Arabidopsis thaliana SHM4 (SERINE HYDROXYMETHYLTRANSFERASE 4); glycine hydroxymethyltransferase AT4G13930 (SHM4) mRNA, complete cds Length = 1810 Score = 170 bits (86), Expect = 3e-39 Identities = 236/285 (82%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| |||| || |||||||||||||| ||||| |||| ||| || Sbjct: 923 aactttgctgtattccctgcgcttcaaggtggtcctcacaatcaccagattggtgctcta 982 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||||||| || || ||||| ||||||| ||||||||| || || || Sbjct: 983 gctgttgcgttgaagcaggctaatactcctggg-ttcaaggtctacgcaaaacaagtgaa 1041 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 ||||| ||||||||| ||||||| || || ||||||||||| ||| |||| |||||| | Sbjct: 1042 agccaatgctgttgcccttggaaactacctaatgagcaagggttaccagattgtgaccaa 1101 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1102 tggaactgagaaccaccttgttctctgggatcttcgccctcttggattgaccggaaacaa 1161 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaa 285 ||| || ||| | || || || || |||||||||||||||||||| Sbjct: 1162 ggttgagaagctctgcgatctgtgcagcattacattgaacaagaa 1206
>gb|AY142551.1| Arabidopsis thaliana clone RAFL08-14-N15 (R11225) mRNA sequence Length = 3755 Score = 170 bits (86), Expect = 3e-39 Identities = 236/285 (82%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| |||| || |||||||||||||| ||||| |||| ||| || Sbjct: 908 aactttgctgtattccctgcgcttcaaggtggtcctcacaatcaccagattggtgctcta 967 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||||||| || || ||||| ||||||| ||||||||| || || || Sbjct: 968 gctgttgcgttgaagcaggctaatactcctggg-ttcaaggtctacgcaaaacaagtgaa 1026 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 ||||| ||||||||| ||||||| || || ||||||||||| ||| |||| |||||| | Sbjct: 1027 agccaatgctgttgcccttggaaactacctaatgagcaagggttaccagattgtgaccaa 1086 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1087 tggaactgagaaccaccttgttctctgggatcttcgccctcttggattgaccggaaacaa 1146 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaa 285 ||| || ||| | || || || || |||||||||||||||||||| Sbjct: 1147 ggttgagaagctctgcgatctgtgcagcattacattgaacaagaa 1191
>gb|AY093987.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds Length = 1416 Score = 170 bits (86), Expect = 3e-39 Identities = 236/285 (82%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| |||| || |||||||||||||| ||||| |||| ||| || Sbjct: 838 aactttgctgtattccctgcgcttcaaggtggtcctcacaatcaccagattggtgctcta 897 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||||||| || || ||||| ||||||| ||||||||| || || || Sbjct: 898 gctgttgcgttgaagcaggctaatactcctggg-ttcaaggtctacgcaaaacaagtgaa 956 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 ||||| ||||||||| ||||||| || || ||||||||||| ||| |||| |||||| | Sbjct: 957 agccaatgctgttgcccttggaaactacctaatgagcaagggttaccagattgtgaccaa 1016 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1017 tggaactgagaaccaccttgttctctgggatcttcgccctcttggattgaccggaaacaa 1076 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaa 285 ||| || ||| | || || || || |||||||||||||||||||| Sbjct: 1077 ggttgagaagctctgcgatctgtgcagcattacattgaacaagaa 1121
>gb|AF361589.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds Length = 1712 Score = 170 bits (86), Expect = 3e-39 Identities = 236/285 (82%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| |||| || |||||||||||||| ||||| |||| ||| || Sbjct: 901 aactttgctgtattccctgcgcttcaaggtggtcctcacaatcaccagattggtgctcta 960 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||||||| || || ||||| ||||||| ||||||||| || || || Sbjct: 961 gctgttgcgttgaagcaggctaatactcctggg-ttcaaggtctacgcaaaacaagtgaa 1019 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 ||||| ||||||||| ||||||| || || ||||||||||| ||| |||| |||||| | Sbjct: 1020 agccaatgctgttgcccttggaaactacctaatgagcaagggttaccagattgtgaccaa 1079 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1080 tggaactgagaaccaccttgttctctgggatcttcgccctcttggattgaccggaaacaa 1139 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaa 285 ||| || ||| | || || || || |||||||||||||||||||| Sbjct: 1140 ggttgagaagctctgcgatctgtgcagcattacattgaacaagaa 1184
>gb|AF324991.2|AF324991 Arabidopsis thaliana AT4g13930 (AT4g13930/dl3005c) mRNA, complete cds Length = 1716 Score = 170 bits (86), Expect = 3e-39 Identities = 236/285 (82%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| |||| || |||||||||||||| ||||| |||| ||| || Sbjct: 905 aactttgctgtattccctgcgcttcaaggtggtcctcacaatcaccagattggtgctcta 964 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||||||| || || ||||| ||||||| ||||||||| || || || Sbjct: 965 gctgttgcgttgaagcaggctaatactcctggg-ttcaaggtctacgcaaaacaagtgaa 1023 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 ||||| ||||||||| ||||||| || || ||||||||||| ||| |||| |||||| | Sbjct: 1024 agccaatgctgttgcccttggaaactacctaatgagcaagggttaccagattgtgaccaa 1083 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1084 tggaactgagaaccaccttgttctctgggatcttcgccctcttggattgaccggaaacaa 1143 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaa 285 ||| || ||| | || || || || |||||||||||||||||||| Sbjct: 1144 ggttgagaagctctgcgatctgtgcagcattacattgaacaagaa 1188
>emb|BX827403.1|CNS0A2GP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1624 Score = 170 bits (86), Expect = 3e-39 Identities = 236/285 (82%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| |||| || |||||||||||||| ||||| |||| ||| || Sbjct: 896 aactttgctgtattccctgcgcttcaaggtggtcctcacaatcaccagattggtgctcta 955 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||||||| || || ||||| ||||||| ||||||||| || || || Sbjct: 956 gctgttgcgttgaagcaggctaatactcctggg-ttcaaggtctacgcaaaacaagtgaa 1014 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 ||||| ||||||||| ||||||| || || ||||||||||| ||| |||| |||||| | Sbjct: 1015 agccaatgctgttgcccttggaaactacctaatgagcaagggttaccagattgtgaccaa 1074 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactggaaacaa 240 ||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1075 tggaactgagaaccaccttgttctctgggatcttcgccctcttggattgaccggaaacaa 1134 Query: 241 ggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaa 285 ||| || ||| | || || || || |||||||||||||||||||| Sbjct: 1135 ggttgagaagctctgcgatctgtgcagcattacattgaacaagaa 1179
>gb|AY106587.1| Zea mays PCO066539 mRNA sequence Length = 603 Score = 167 bits (84), Expect = 5e-38 Identities = 195/232 (84%) Strand = Plus / Plus Query: 320 ggtggtgtccgcattggtgctcctgctatgacctccaggggtctggttgagaaggacttc 379 |||||||| ||||||||| | |||||||||||||| |||||| ||||||||||||||||| Sbjct: 15 ggtggtgtgcgcattggtacacctgctatgacctcaaggggtttggttgagaaggacttc 74 Query: 380 gagcagatcgccgagttcctccaccaggcagtgaccatctgcctgaacatccagaaggag 439 | |||||| ||||||| ||| |||| || |||||||||||| ||| ||||||| |||| Sbjct: 75 gtgcagattgccgagtaccttcaccgagctgtgaccatctgcttgagcatccaggcggag 134 Query: 440 cacgggaagctgctcaaggacttctccaagggcctggtgaacaacaaggacattgagaac 499 || || ||| | |||||||||||| |||||| ||||| | ||||||||||| |||||| Sbjct: 135 catggcaagattctcaaggacttcaagaagggcttggtgcaaaacaaggacatagagaac 194 Query: 500 ctcaaggtcgaggtcgagaagtttgccctctcctttgacatgcccggcttca 551 || | || |||||||||||||| ||| || ||||||||||| ||||||| Sbjct: 195 ctgagggcggaggtcgagaagttcgccacttcatttgacatgcctggcttca 246
>gb|DQ175859.1| Hordeum vulgare clone DsC31 Ds insertion site flanking region genomic sequence Length = 659 Score = 165 bits (83), Expect = 2e-37 Identities = 122/135 (90%) Strand = Plus / Minus Query: 335 ggtgctcctgctatgacctccaggggtctggttgagaaggacttcgagcagatcgccgag 394 |||||||| || ||||| || ||||||||||| ||||| || ||||||||||| |||||| Sbjct: 645 ggtgctccagcaatgacttcaaggggtctggtcgagaaagatttcgagcagattgccgag 586 Query: 395 ttcctccaccaggcagtgaccatctgcctgaacatccagaaggagcacgggaagctgctc 454 |||||||||||||| ||||| |||||| |||| ||||||||||||||||| ||||||||| Sbjct: 585 ttcctccaccaggctgtgacgatctgcttgaaaatccagaaggagcacggcaagctgctc 526 Query: 455 aaggacttctccaag 469 ||||||||||||||| Sbjct: 525 aaggacttctccaag 511
>gb|AY086929.1| Arabidopsis thaliana clone 29662 mRNA, complete sequence Length = 1723 Score = 165 bits (83), Expect = 2e-37 Identities = 164/191 (85%) Strand = Plus / Plus Query: 95 ttcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctcatg 154 ||||||| ||||||||| || || || ||||| ||||||||| ||||||| || || ||| Sbjct: 1010 ttcaaggtctacgcaaaacaagtgaaagccaatgctgttgcccttggaaactacctaatg 1069 Query: 155 agcaagggctacaagatggtgaccgatggaactgacaaccaccttgttctatgggatctc 214 |||||||| ||| |||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1070 agcaagggttaccagattgtgaccaatggaactgagaaccaccttgttctctgggatctt 1129 Query: 215 cgccctcttggcttgactggaaacaaggtcgaaaagatgtgtgacctttgtagcattaca 274 ||||||||||| ||||| ||||||||||| || ||| | || || || || ||||||||| Sbjct: 1130 cgccctcttggattgaccggaaacaaggttgagaagctctgcgatctgtgcagcattaca 1189 Query: 275 ttgaacaagaa 285 ||||||||||| Sbjct: 1190 ttgaacaagaa 1200
>dbj|AB154528.1| Cucumis melo 6F11 mRNA for hypothetical protein, partial cds Length = 963 Score = 141 bits (71), Expect = 3e-30 Identities = 413/526 (78%), Gaps = 1/526 (0%) Strand = Plus / Plus Query: 25 cagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaactttg 84 ||||| ||||||||||| |||||||||| ||| | || |||||| ||||||| || || Sbjct: 420 cagggcggtcctcacaatcaccaaattggtgctttagctgttgccttgaagcaggctatg 479 Query: 85 acacctggnattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttggaaa 144 | ||||| ||||||||||| || || || || |||||||| || || ||| | ||||| Sbjct: 480 tcccctggg-ttcaaggcctatgctaaacaagttaaggccaatgccgtggccctcggaaa 538 Query: 145 gtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccaccttgttct 204 || || |||| |||||| |||||| | || || | ||||| || |||||||||||||| Sbjct: 539 ttacctgatgaacaagggttacaagcttgttactggaggaaccgagaaccaccttgttct 598 Query: 205 atgggatctccgccctcttggcttgactggaaacaaggtcgaaaagatgtgtgacctttg 264 |||||||| || ||| | || |||||||| |||||||| || ||| |||| ||| | || Sbjct: 599 ctgggatcttcgtcctttgggattgactggcaacaaggttgagaagctgtgcgacttgtg 658 Query: 265 tagcattacattgaacaagaatgctgtcttcggtgacagcagtgcattgtccccgggtgg 324 | ||| || | ||||| || || || || |||||||||||||||||| | || || || Sbjct: 659 caacatcaccgtaaacaaaaacgcagtgtttggtgacagcagtgcattgactcccggagg 718 Query: 325 tgtccgcattggtgctcctgctatgacctccaggggtctggttgagaaggacttcgagca 384 |||| | || ||||| ||||| ||||| || || ||| |||| ||||| |||||||| || Sbjct: 719 tgtcagaatcggtgcacctgccatgacttcaagaggtttggtagagaaagacttcgaaca 778 Query: 385 gatcgccgagttcctccaccaggcagtgaccatctgcctgaacatccagaaggagcacgg 444 |||||| |||||||| |||| || || |||||| | |||||||||||||||| | || Sbjct: 779 gatcgcggagttcctgcaccgtgctgtaaccatcaccttgaacatccagaaggaatatgg 838 Query: 445 gaagctgctcaaggacttctccaagggcctggtgaacaacaaggacattgagaacctcaa 504 |||||| | ||||||||| |||||| || || ||||||||||| || || | ||||| Sbjct: 839 aaagctgttgaaggacttcaacaagggtcttgtaaacaacaaggaaatcgaagagctcaa 898 Query: 505 ggtcgaggtcgagaagtttgccctctcctttgacatgcccggcttc 550 || || |||||||| ||| || ||| || |||||||| |||||| Sbjct: 899 ggctgatgtcgagaaattttccggctctttcgacatgccaggcttc 944
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Minus Query: 341 cctgctatgacctccaggggtctggttgagaaggacttcgagcagatcgccgagttcctc 400 ||||| ||||| || |||||| |||| ||| ||||||| | ||||||||||||||||| Sbjct: 12437571 cctgccatgacatcaaggggtttggtagaggaggactttgtacagatcgccgagttcctt 12437512 Query: 401 caccaggcagtgaccatctgcctgaacatccagaaggagcacgggaagctgctcaaggac 460 ||||||||||||||||||||| || | | |||||||||| || ||||| |||||| || Sbjct: 12437511 caccaggcagtgaccatctgcttggatgttcagaaggagcgtggcaagcttctcaagtac 12437452 Query: 461 ttctccaagggcctggtgaacaacaaggacattgagaacctcaaggtcgaggtcgagaag 520 ||| | ||||||||| ||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 12437451 ttcaacgagggcctggagaacaacaaggacattgaggacctcagggcggaggtggagaag 12437392 Query: 521 tttgcc 526 |||||| Sbjct: 12437391 tttgcc 12437386 Score = 131 bits (66), Expect = 3e-27 Identities = 193/234 (82%), Gaps = 1/234 (0%) Strand = Plus / Minus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || ||||| || |||||||| || || ||||||||||||||||||||||| || Sbjct: 12438850 aacttcgcagtgtttccgtcgctccaagggggccctcacaaccaccaaattgctgcgcta 12438791 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || |||| ||||||| ||| || ||||||| ||||||| | || ||||||||||| Sbjct: 12438790 gcggttggtttgaagcagactatgtcacctgg-attcaagtcttatattaagcaggtcaa 12438732 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||| ||||||||| |||| || || | ||||| ||||||||||| |||| || || Sbjct: 12438731 ggccaatgctgttgcccttggtaaccatttgatgagtaagggctacaaattggttactga 12438672 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactgg 234 ||||| || ||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 12438671 cggaacagagaaccatcttgttctctgggatctgcgccctcttggcttgactgg 12438618 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 266 agcattacattgaacaagaatgctgtcttcggtgacagcagtgcattgtccccgggtggt 325 ||||||||| ||||||| ||||||||||| || || ||||||||| |||| || |||||| Sbjct: 12438505 agcattacactgaacaaaaatgctgtctttggggatagcagtgcaatgtcacctggtggt 12438446 Query: 326 gtccgcattggt 337 |||||||||||| Sbjct: 12438445 gtccgcattggt 12438434
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Minus Query: 341 cctgctatgacctccaggggtctggttgagaaggacttcgagcagatcgccgagttcctc 400 ||||| ||||| || |||||| |||| ||| ||||||| | ||||||||||||||||| Sbjct: 12391941 cctgccatgacatcaaggggtttggtagaggaggactttgtacagatcgccgagttcctt 12391882 Query: 401 caccaggcagtgaccatctgcctgaacatccagaaggagcacgggaagctgctcaaggac 460 ||||||||||||||||||||| || | | |||||||||| || ||||| |||||| || Sbjct: 12391881 caccaggcagtgaccatctgcttggatgttcagaaggagcgtggcaagcttctcaagtac 12391822 Query: 461 ttctccaagggcctggtgaacaacaaggacattgagaacctcaaggtcgaggtcgagaag 520 ||| | ||||||||| ||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 12391821 ttcaacgagggcctggagaacaacaaggacattgaggacctcagggcggaggtggagaag 12391762 Query: 521 tttgcc 526 |||||| Sbjct: 12391761 tttgcc 12391756 Score = 131 bits (66), Expect = 3e-27 Identities = 193/234 (82%), Gaps = 1/234 (0%) Strand = Plus / Minus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || ||||| || |||||||| || || ||||||||||||||||||||||| || Sbjct: 12393220 aacttcgcagtgtttccgtcgctccaagggggccctcacaaccaccaaattgctgcgcta 12393161 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || |||| ||||||| ||| || ||||||| ||||||| | || ||||||||||| Sbjct: 12393160 gcggttggtttgaagcagactatgtcacctgg-attcaagtcttatattaagcaggtcaa 12393102 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||| ||||||||| |||| || || | ||||| ||||||||||| |||| || || Sbjct: 12393101 ggccaatgctgttgcccttggtaaccatttgatgagtaagggctacaaattggttactga 12393042 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactgg 234 ||||| || ||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 12393041 cggaacagagaaccatcttgttctctgggatctgcgccctcttggcttgactgg 12392988 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 266 agcattacattgaacaagaatgctgtcttcggtgacagcagtgcattgtccccgggtggt 325 ||||||||| ||||||| ||||||||||| || || ||||||||| |||| || |||||| Sbjct: 12392875 agcattacactgaacaaaaatgctgtctttggggatagcagtgcaatgtcacctggtggt 12392816 Query: 326 gtccgcattggt 337 |||||||||||| Sbjct: 12392815 gtccgcattggt 12392804
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Minus Query: 341 cctgctatgacctccaggggtctggttgagaaggacttcgagcagatcgccgagttcctc 400 ||||| ||||| || |||||| |||| ||| ||||||| | ||||||||||||||||| Sbjct: 151936 cctgccatgacatcaaggggtttggtagaggaggactttgtacagatcgccgagttcctt 151877 Query: 401 caccaggcagtgaccatctgcctgaacatccagaaggagcacgggaagctgctcaaggac 460 ||||||||||||||||||||| || | | |||||||||| || ||||| |||||| || Sbjct: 151876 caccaggcagtgaccatctgcttggatgttcagaaggagcgtggcaagcttctcaagtac 151817 Query: 461 ttctccaagggcctggtgaacaacaaggacattgagaacctcaaggtcgaggtcgagaag 520 ||| | ||||||||| ||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 151816 ttcaacgagggcctggagaacaacaaggacattgaggacctcagggcggaggtggagaag 151757 Query: 521 tttgcc 526 |||||| Sbjct: 151756 tttgcc 151751 Score = 131 bits (66), Expect = 3e-27 Identities = 193/234 (82%), Gaps = 1/234 (0%) Strand = Plus / Minus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || ||||| || |||||||| || || ||||||||||||||||||||||| || Sbjct: 153215 aacttcgcagtgtttccgtcgctccaagggggccctcacaaccaccaaattgctgcgcta 153156 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || |||| ||||||| ||| || ||||||| ||||||| | || ||||||||||| Sbjct: 153155 gcggttggtttgaagcagactatgtcacctgg-attcaagtcttatattaagcaggtcaa 153097 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||| ||||||||| |||| || || | ||||| ||||||||||| |||| || || Sbjct: 153096 ggccaatgctgttgcccttggtaaccatttgatgagtaagggctacaaattggttactga 153037 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactgg 234 ||||| || ||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 153036 cggaacagagaaccatcttgttctctgggatctgcgccctcttggcttgactgg 152983 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 266 agcattacattgaacaagaatgctgtcttcggtgacagcagtgcattgtccccgggtggt 325 ||||||||| ||||||| ||||||||||| || || ||||||||| |||| || |||||| Sbjct: 152870 agcattacactgaacaaaaatgctgtctttggggatagcagtgcaatgtcacctggtggt 152811 Query: 326 gtccgcattggt 337 |||||||||||| Sbjct: 152810 gtccgcattggt 152799
>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132241 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Minus Query: 341 cctgctatgacctccaggggtctggttgagaaggacttcgagcagatcgccgagttcctc 400 ||||| ||||| || |||||| |||| ||| ||||||| | ||||||||||||||||| Sbjct: 39049 cctgccatgacatcaaggggtttggtagaggaggactttgtacagatcgccgagttcctt 38990 Query: 401 caccaggcagtgaccatctgcctgaacatccagaaggagcacgggaagctgctcaaggac 460 ||||||||||||||||||||| || | | |||||||||| || ||||| |||||| || Sbjct: 38989 caccaggcagtgaccatctgcttggatgttcagaaggagcgtggcaagcttctcaagtac 38930 Query: 461 ttctccaagggcctggtgaacaacaaggacattgagaacctcaaggtcgaggtcgagaag 520 ||| | ||||||||| ||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 38929 ttcaacgagggcctggagaacaacaaggacattgaggacctcagggcggaggtggagaag 38870 Query: 521 tttgcc 526 |||||| Sbjct: 38869 tttgcc 38864 Score = 131 bits (66), Expect = 3e-27 Identities = 193/234 (82%), Gaps = 1/234 (0%) Strand = Plus / Minus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 ||||| || ||||| || |||||||| || || ||||||||||||||||||||||| || Sbjct: 40328 aacttcgcagtgtttccgtcgctccaagggggccctcacaaccaccaaattgctgcgcta 40269 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || |||| ||||||| ||| || ||||||| ||||||| | || ||||||||||| Sbjct: 40268 gcggttggtttgaagcagactatgtcacctgg-attcaagtcttatattaagcaggtcaa 40210 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||| ||||||||| |||| || || | ||||| ||||||||||| |||| || || Sbjct: 40209 ggccaatgctgttgcccttggtaaccatttgatgagtaagggctacaaattggttactga 40150 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactgg 234 ||||| || ||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 40149 cggaacagagaaccatcttgttctctgggatctgcgccctcttggcttgactgg 40096 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 266 agcattacattgaacaagaatgctgtcttcggtgacagcagtgcattgtccccgggtggt 325 ||||||||| ||||||| ||||||||||| || || ||||||||| |||| || |||||| Sbjct: 39983 agcattacactgaacaaaaatgctgtctttggggatagcagtgcaatgtcacctggtggt 39924 Query: 326 gtccgcattggt 337 |||||||||||| Sbjct: 39923 gtccgcattggt 39912
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 135 bits (68), Expect = 2e-28 Identities = 191/231 (82%), Gaps = 1/231 (0%) Strand = Plus / Minus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| |||| || |||||||||||||| ||||| |||| ||| || Sbjct: 6667 aactttgctgtattccctgcgcttcaaggtggtcctcacaatcaccagattggtgctcta 6608 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||||||| || || ||||| ||||||| ||||||||| || || || Sbjct: 6607 gctgttgcgttgaagcaggctaatactcctggg-ttcaaggtctacgcaaaacaagtgaa 6549 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 ||||| ||||||||| ||||||| || || ||||||||||| ||| |||| |||||| | Sbjct: 6548 agccaatgctgttgcccttggaaactacctaatgagcaagggttaccagattgtgaccaa 6489 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgac 231 ||||||||| |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 6488 tggaactgagaaccaccttgttctctgggatcttcgccctcttggattgac 6438 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 233 ggaaacaaggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaa 285 ||||||||||| || ||| | || || || || |||||||||||||||||||| Sbjct: 6345 ggaaacaaggttgagaagctctgcgatctgtgcagcattacattgaacaagaa 6293
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 135 bits (68), Expect = 2e-28 Identities = 191/231 (82%), Gaps = 1/231 (0%) Strand = Plus / Minus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| |||| || |||||||||||||| ||||| |||| ||| || Sbjct: 140882 aactttgctgtattccctgcgcttcaaggtggtcctcacaatcaccagattggtgctcta 140823 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || ||||| ||||||| || || ||||| ||||||| ||||||||| || || || Sbjct: 140822 gctgttgcgttgaagcaggctaatactcctggg-ttcaaggtctacgcaaaacaagtgaa 140764 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 ||||| ||||||||| ||||||| || || ||||||||||| ||| |||| |||||| | Sbjct: 140763 agccaatgctgttgcccttggaaactacctaatgagcaagggttaccagattgtgaccaa 140704 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgac 231 ||||||||| |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 140703 tggaactgagaaccaccttgttctctgggatcttcgccctcttggattgac 140653 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 176 accgatggaactgacaaccaccttgttctatgggatctccgccctcttggcttgac 231 |||||||||||||| ||||||||| |||| |||||||| ||||||||||| ||||| Sbjct: 124815 accgatggaactgataaccaccttattctttgggatcttcgccctcttggattgac 124760 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 233 ggaaacaaggtcgaaaagatgtgtgacctttgtagcattacattgaacaagaa 285 ||||||||||| || ||| | || || || || |||||||||||||||||||| Sbjct: 140560 ggaaacaaggttgagaagctctgcgatctgtgcagcattacattgaacaagaa 140508 Score = 40.1 bits (20), Expect = 8.2 Identities = 53/64 (82%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||| || || |||| ||| || | ||||||||| |||||| |||||||||||| Sbjct: 124405 acatccaggagcagtacggtaaggtgatgaaggacttcaacaagggtttggtgaacaaca 124346 Query: 486 agga 489 |||| Sbjct: 124345 agga 124342
>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds Length = 99431 Score = 93.7 bits (47), Expect = 6e-16 Identities = 188/234 (80%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| || || || |||||||||||||| ||||| |||| ||||||| Sbjct: 62580 aactttgcagttttcccttcccttcaaggtggtcctcacaatcaccagattggtgccctt 62639 Query: 61 gcagttgccctgaagcaaactttgacacctggnattcaaggcctacgcaaagcaggtcaa 120 || |||||| |||| || | || ||||||| |||||||| || || ||||| || || Sbjct: 62640 gctgttgccttgaaacaggccatgtcacctggg-ttcaaggcatatgccaagcaagttaa 62698 Query: 121 ggccaacgctgttgccgttggaaagtatctcatgagcaagggctacaagatggtgaccga 180 |||||| || |||||| ||||||| || | ||||||||||| |||| | || || | Sbjct: 62699 ggccaatgcagttgccattggaaattacttgatgagcaagggatacagtcttgtcactgg 62758 Query: 181 tggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactgg 234 ||||||||| ||||| ||||| | |||||||| ||||||||||| |||||||| Sbjct: 62759 tggaactgagaaccatcttgtgttgtgggatcttcgccctcttggattgactgg 62812
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds Length = 68460 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 335 ggtgctcctgctatgacctccaggggtctggttgagaaggacttcgagcagatcgccgag 394 ||||| || |||||||| ||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 20975 ggtgccccagctatgacttccaggggtttggttgagaaggacttcgagcagattgcagag 20916 Query: 395 ttcctccacc 404 ||||| |||| Sbjct: 20915 ttccttcacc 20906 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 182 ggaactgacaaccaccttgttctatgggatctccgccctcttggcttgac 231 |||||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 21468 ggaactgaaaaccatcttgtgttatgggatctccgccctcttggcttgac 21419 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccaccaaattgctgccctt 60 |||||||| || ||||| || || ||||||||||||||||||||||| |||| ||| ||| Sbjct: 21648 aactttgctgttttcccctcccttcagggtggtcctcacaaccaccagattggtgctctt 21589 Query: 61 gcagttgc 68 || ||||| Sbjct: 21588 gctgttgc 21581 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 254 tgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgc 309 |||||||| |||| |||||| |||||||||||||||| || ||||| |||||||| Sbjct: 21311 tgtgacctctgtaacattactgtgaacaagaatgctgtttttggtgatagcagtgc 21256
>ref|NM_117463.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT4G13890 mRNA, complete cds Length = 1592 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 176 accgatggaactgacaaccaccttgttctatgggatctccgccctcttggcttgactgga 235 |||||||||||||| ||||||||| |||| |||||||| ||||||||||| ||||| || Sbjct: 1017 accgatggaactgataaccaccttattctttgggatcttcgccctcttggattgaccggt 1076 Query: 236 aacaaggt 243 |||||||| Sbjct: 1077 aacaaggt 1084 Score = 40.1 bits (20), Expect = 8.2 Identities = 53/64 (82%) Strand = Plus / Plus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||| || || |||| ||| || | ||||||||| |||||| |||||||||||| Sbjct: 1267 acatccaggagcagtacggtaaggtgatgaaggacttcaacaagggtttggtgaacaaca 1326 Query: 486 agga 489 |||| Sbjct: 1327 agga 1330
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 176 accgatggaactgacaaccaccttgttctatgggatctccgccctcttggcttgac 231 |||||||||||||| ||||||||| |||| |||||||| ||||||||||| ||||| Sbjct: 103723 accgatggaactgataaccaccttattctttgggatcttcgccctcttggattgac 103668 Score = 40.1 bits (20), Expect = 8.2 Identities = 53/64 (82%) Strand = Plus / Minus Query: 426 acatccagaaggagcacgggaagctgctcaaggacttctccaagggcctggtgaacaaca 485 |||||||| || || |||| ||| || | ||||||||| |||||| |||||||||||| Sbjct: 103313 acatccaggagcagtacggtaaggtgatgaaggacttcaacaagggtttggtgaacaaca 103254 Query: 486 agga 489 |||| Sbjct: 103253 agga 103250
>gb|AF498512.1| Zea mays cultivar H98 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 259 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 531 cctttgacatgcccggcttcacgctcgagagcatgaagtacaaggagtag 580 |||| |||||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 259 ccttcgacatgcctgggttcacgcttgagagcatgaaatacaaggagtag 210
>gb|AF498513.1| Zea mays cultivar C123 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 256 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 536 gacatgcccggcttcacgctcgagagcatgaagtacaaggagtag 580 |||||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 254 gacatgcctgggttcacgcttgagagcatgaaatacaaggagtag 210
>ref|XM_386466.1| Gibberella zeae PH-1 chromosome 3 GLYC_NEUCR Serine hydroxymethyltransferase, cytosolic (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) (FG06290.1) partial mRNA Length = 1476 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 24 ccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagca 77 |||||||||||||||||||||| || ||||||| || |||||||||||||| Sbjct: 909 ccagggtggtcctcacaaccacaccatcactgccctggctgttgccctgaagca 962
>dbj|AK109000.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-G10, full insert sequence Length = 2504 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2 actttgcggtgttcccatcgctccagggtggtcctcacaaccacca 47 ||||||| |||||||||||||| ||||| || || ||||||||||| Sbjct: 940 actttgcagtgttcccatcgctgcagggcggcccccacaaccacca 985
>gb|BC108318.1| Homo sapiens ligase I, DNA, ATP-dependent, mRNA (cDNA clone MGC:117397 IMAGE:6141535), complete cds Length = 3421 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 2524 aaggacatcgagcagatcgccgagttcct 2552
>ref|XM_524321.1| PREDICTED: Pan troglodytes DNA ligase I (LOC468936), mRNA Length = 4041 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 3049 aaggacgtcgagcagatcgccgagttcct 3077
>gb|AF527418.1| Homo sapiens ligase I, DNA, ATP-dependent (LIG1) gene, complete cds Length = 56408 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 47992 aaggacatcgagcagatcgccgagttcct 48020
>emb|CR619348.1| full-length cDNA clone CS0DJ001YC06 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1500 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 756 aaggacatcgagcagatcgccgagttcct 784
>emb|CR599472.1| full-length cDNA clone CS0DJ009YF03 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1637 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 826 aaggacatcgagcagatcgccgagttcct 854
>gb|AC010458.6| Homo sapiens chromosome 19 clone CTD-2265M8, complete sequence Length = 105788 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 7615 aaggacatcgagcagatcgccgagttcct 7643
>gb|AC011466.6| Homo sapiens chromosome 19 clone CTC-453G23, complete sequence Length = 167272 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 40809 aaggacatcgagcagatcgccgagttcct 40781
>gb|BC110622.1| Homo sapiens ligase I, DNA, ATP-dependent, mRNA (cDNA clone MGC:130025 IMAGE:40035687), complete cds Length = 3965 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 2173 aaggacatcgagcagatcgccgagttcct 2201
>ref|NM_000234.1| Homo sapiens ligase I, DNA, ATP-dependent (LIG1), mRNA Length = 3083 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 2224 aaggacatcgagcagatcgccgagttcct 2252
>dbj|AB208791.1| Homo sapiens mRNA for DNA ligase I variant protein Length = 4102 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 2244 aaggacatcgagcagatcgccgagttcct 2272
>gb|M36067.1|HUMLIGAA Human DNA ligase I mRNA, complete cds Length = 3083 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 aaggacttcgagcagatcgccgagttcct 399 |||||| |||||||||||||||||||||| Sbjct: 2224 aaggacatcgagcagatcgccgagttcct 2252
>gb|BT011432.1| Drosophila melanogaster RH67089 full insert cDNA Length = 2013 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 7 gcggtgttcccatcgctccagggtggtcctcacaac 42 |||||||| ||||| |||||||||||||| |||||| Sbjct: 1299 gcggtgtttccatcactccagggtggtccgcacaac 1334
>gb|AC023720.4| Drosophila melanogaster X BAC RP98-7F15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179205 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 7 gcggtgttcccatcgctccagggtggtcctcacaac 42 |||||||| ||||| |||||||||||||| |||||| Sbjct: 142560 gcggtgtttccatcactccagggtggtccgcacaac 142595
>ref|NM_132050.1| Drosophila melanogaster CG3011-RA (CG3011), mRNA Length = 1998 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 7 gcggtgttcccatcgctccagggtggtcctcacaac 42 |||||||| ||||| |||||||||||||| |||||| Sbjct: 1298 gcggtgtttccatcactccagggtggtccgcacaac 1333
>gb|AE003435.3| Drosophila melanogaster chromosome X, section 19 of 74 of the complete sequence Length = 290042 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 7 gcggtgttcccatcgctccagggtggtcctcacaac 42 |||||||| ||||| |||||||||||||| |||||| Sbjct: 286672 gcggtgtttccatcactccagggtggtccgcacaac 286637
>ref|XM_779683.1| PREDICTED: Strongylocentrotus purpuratus similar to serine hydroxymethyltransferase 2 (mitochondrial) (LOC579575), mRNA Length = 1847 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 332 attggtgctcctgctatgacctc 354 ||||||||||||||||||||||| Sbjct: 1313 attggtgctcctgctatgacctc 1335
>gb|AY670581.1| Pinus taeda isolate 27 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670580.1| Pinus taeda isolate 29 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670579.1| Pinus taeda isolate 1 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670578.1| Pinus taeda isolate 17 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670577.1| Pinus taeda isolate 8 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670576.1| Pinus taeda isolate 28 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670575.1| Pinus taeda isolate 19 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670574.1| Pinus taeda isolate 3 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670573.1| Pinus taeda isolate 2 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670572.1| Pinus taeda isolate 10 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670571.1| Pinus taeda isolate 30 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670570.1| Pinus taeda isolate 13 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670569.1| Pinus taeda isolate 25 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670568.1| Pinus taeda isolate 7 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670567.1| Pinus taeda isolate 11 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670566.1| Pinus taeda isolate 24 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670565.1| Pinus taeda isolate 12 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670564.1| Pinus taeda isolate 20 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670563.1| Pinus taeda isolate 15 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670562.1| Pinus taeda isolate 5 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670561.1| Pinus taeda isolate 31 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670560.1| Pinus taeda isolate 21 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670559.1| Pinus taeda isolate 18 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670557.1| Pinus taeda isolate 22 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670556.1| Pinus taeda isolate 14 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670555.1| Pinus taeda isolate 23 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670554.1| Pinus taeda isolate 9 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670553.1| Pinus taeda isolate 26 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670552.1| Pinus taeda isolate 4 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670551.1| Pinus taeda isolate 6 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>gb|AY670550.1| Pinus taeda isolate 16 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgtccgcattggt 337 ||||||| |||||||| || |||||| Sbjct: 293 tgtcccctggtggtgttcgtattggt 318
>ref|XM_750023.1| Aspergillus fumigatus Af293 cytosolic hydroxymethyltransferase (Afu2g07810) partial mRNA Length = 1614 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 ccagggtggtcctcacaaccac 45 |||||||||||||||||||||| Sbjct: 1023 ccagggtggtcctcacaaccac 1044
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 cttcgagcagatcgccgagttc 397 |||||||||||||||||||||| Sbjct: 3440555 cttcgagcagatcgccgagttc 3440576
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 cttcgagcagatcgccgagttc 397 |||||||||||||||||||||| Sbjct: 2659668 cttcgagcagatcgccgagttc 2659689
>gb|BC004825.1| Mus musculus serine hydroxymethyl transferase 2 (mitochondrial), mRNA (cDNA clone MGC:6459 IMAGE:2615850), complete cds Length = 2085 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1029 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 1073
>ref|NM_028230.2| Mus musculus serine hydroxymethyl transferase 2 (mitochondrial) (Shmt2), mRNA Length = 2280 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1061 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 1105
>gb|AC167719.2| Mus musculus BAC clone RP24-285I8 from chromosome 10, complete sequence Length = 180573 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 135451 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 135407
>ref|XM_388057.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07881.1) partial mRNA Length = 1614 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 aaagtatctcatgagcaaggg 162 ||||||||||||||||||||| Sbjct: 819 aaagtatctcatgagcaaggg 839
>gb|AC133190.2| Mus musculus BAC clone RP23-375H9 from chromosome 10, complete sequence Length = 151273 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 52406 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 52362
>ref|NM_137344.2| Drosophila melanogaster CG30456-RA (CG30456), mRNA Length = 2386 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 tcgagcagatcgccgagttcc 398 ||||||||||||||||||||| Sbjct: 1041 tcgagcagatcgccgagttcc 1061
>dbj|AK162421.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430002B06 product:serine hydroxymethyl transferase 2 (mitochondrial), full insert sequence Length = 2113 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1071 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 1115
>gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53F-54A, BAC clone BACR32P08, complete sequence Length = 163072 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 tcgagcagatcgccgagttcc 398 ||||||||||||||||||||| Sbjct: 113447 tcgagcagatcgccgagttcc 113467
>dbj|AK169192.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920089B02 product:serine hydroxymethyl transferase 2 (mitochondrial), full insert sequence Length = 2239 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1004 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 1048
>dbj|AK051207.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130016H13 product:SERINE HYDROXYMETHYLTRANSFERASE (EC 2.1.2.1) (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT), full insert sequence Length = 2280 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1061 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 1105
>dbj|AK012355.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700043D08 product:SERINE HYDROXYMETHYLTRANSFERASE (EC 2.1.2.1) (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT) homolog [Mus musculus], full insert sequence Length = 2054 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1015 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 1059
>dbj|AK037339.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130008G10 product:SERINE HYDROXYMETHYLTRANSFERASE (EC 2.1.2.1) (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT), full insert sequence Length = 2065 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1024 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 1068
>gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, region 53D-54A, BAC clone BACR11M15, complete sequence Length = 170994 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 tcgagcagatcgccgagttcc 398 ||||||||||||||||||||| Sbjct: 37614 tcgagcagatcgccgagttcc 37634
>dbj|AK207979.1| Mus musculus cDNA, clone:Y2G0109L18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026470, based on BLAT search Length = 155 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 70 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 114
>dbj|AK195620.1| Mus musculus cDNA, clone:Y1G0119B08, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026470, based on BLAT search Length = 168 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 71 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 115
>dbj|AK194812.1| Mus musculus cDNA, clone:Y1G0116I06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026470, based on BLAT search Length = 167 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 70 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 114
>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete sequence Length = 260337 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 tcgagcagatcgccgagttcc 398 ||||||||||||||||||||| Sbjct: 100739 tcgagcagatcgccgagttcc 100759
>gb|BC051396.1| Mus musculus serine hydroxymethyl transferase 2 (mitochondrial), mRNA (cDNA clone MGC:58993 IMAGE:5132676), complete cds Length = 1774 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaaccac 45 ||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 992 aacttcgctgtgttcccatccctacagggtggcccccacaaccac 1036
>ref|XM_510545.1| PREDICTED: Pan troglodytes similar to transmembrane channel-like 3 (LOC453589), mRNA Length = 4479 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ggcagtgaccatctgcctga 425 |||||||||||||||||||| Sbjct: 1932 ggcagtgaccatctgcctga 1951
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 acctcaaggtcgaggtcgag 517 |||||||||||||||||||| Sbjct: 43727 acctcaaggtcgaggtcgag 43746
>gb|AY670558.1| Pinus taeda isolate 32 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 8.2 Identities = 62/76 (81%) Strand = Plus / Plus Query: 252 tgtgtgacctttgtagcattacattgaacaagaatgctgtcttcggtgacagcagtgcat 311 |||||||||| |||| || ||| | ||||||||||| || | |||||||| ||||| Sbjct: 233 tgtgtgacctgtgtaatataacaatcaacaagaatgcagtttatggtgacagtagtgctc 292 Query: 312 tgtccccgggtggtgt 327 ||||||| |||||||| Sbjct: 293 tgtcccctggtggtgt 308
>gb|AC145554.2| Mus musculus BAC clone RP23-217E22 from chromosome 18, complete sequence Length = 214489 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agttgccctgaagcaaactt 82 |||||||||||||||||||| Sbjct: 42340 agttgccctgaagcaaactt 42359
>ref|XM_455485.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F08921g predicted mRNA Length = 1410 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 320 ggtggtgtccgcattggtgctcctgctatgac 351 ||||||||||| || |||||||| |||||||| Sbjct: 1168 ggtggtgtccgtatcggtgctccagctatgac 1199
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 caacaaggacattgagaacc 500 |||||||||||||||||||| Sbjct: 235805 caacaaggacattgagaacc 235786
>gb|AC132366.4| Mus musculus BAC clone RP23-461N12 from chromosome 7, complete sequence Length = 183964 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 atgaagtacaaggagtagga 582 |||||||||||||||||||| Sbjct: 29756 atgaagtacaaggagtagga 29775
>ref|XM_853209.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 4 (LOC607458), mRNA Length = 2068 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaacca 44 |||||||| ||||||||||| || ||||| || || |||||||| Sbjct: 962 aactttgctgtgttcccatccctgcagggcgggccccacaacca 1005
>ref|XM_844151.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 2 (LOC607458), mRNA Length = 2150 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaacca 44 |||||||| ||||||||||| || ||||| || || |||||||| Sbjct: 962 aactttgctgtgttcccatccctgcagggcgggccccacaacca 1005
>gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosome 18, complete sequence Length = 211919 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agttgccctgaagcaaactt 82 |||||||||||||||||||| Sbjct: 69582 agttgccctgaagcaaactt 69563
>ref|XM_774258.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_165_11606_4440) partial mRNA Length = 7167 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 atccagaaggagcacgggaagctg 451 ||||||||| |||||||||||||| Sbjct: 1753 atccagaagcagcacgggaagctg 1776
>gb|DQ450540.1| Trypanosoma pestanai alpha tubulin and beta tubulin genes, partial cds Length = 1087 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 aaacaaggtcgaaaagatgtgtga 258 ||||||||||||||||||| |||| Sbjct: 674 aaacaaggtcgaaaagatgcgtga 697
>ref|XM_545878.2| PREDICTED: Canis familiaris similar to transmembrane channel-like gene family 3 (LOC488760), mRNA Length = 3399 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ggcagtgaccatctgcctga 425 |||||||||||||||||||| Sbjct: 936 ggcagtgaccatctgcctga 955
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 agcagatcgccgagttcctc 400 |||||||||||||||||||| Sbjct: 3072618 agcagatcgccgagttcctc 3072599
>gb|AY236490.1| Homo sapiens transmembrane channel-like protein 3 (TMC3) mRNA, complete cds Length = 2442 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ggcagtgaccatctgcctga 425 |||||||||||||||||||| Sbjct: 1014 ggcagtgaccatctgcctga 1033
>emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chromosome 9q31.1-32 Contains part of a novel gene, the OGN gene for osteoglycin (osteoinductive factor, mimecan), the OMD gene for osteomodulin, the ASPN gene for asporin (LRR class 1) and the 3' end of the ECM2 gene for extracellular matrix protein 2 (female organ and adipocyte specific), complete sequence Length = 152341 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 ttcctccaccaggcagtgaccatc 418 ||||||| |||||||||||||||| Sbjct: 61951 ttcctcccccaggcagtgaccatc 61928
>gb|AY263163.1| Homo sapiens TMC3 protein (TMC3) mRNA, complete cds Length = 4746 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ggcagtgaccatctgcctga 425 |||||||||||||||||||| Sbjct: 975 ggcagtgaccatctgcctga 994
>emb|X91902.1|OCSERHMTF O.cuniculus mRNA for serine hydroxymethyltransferase Length = 1862 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaacca 44 ||||| || |||||||||||||| ||||| || || |||||||| Sbjct: 984 aacttcgctgtgttcccatcgctgcaggggggcccccacaacca 1027
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 320 ggtggtgtccgcattggtgctcctgctatgac 351 ||||||||||| || |||||||| |||||||| Sbjct: 829243 ggtggtgtccgtatcggtgctccagctatgac 829212
>emb|BX640632.1|HSM806678 Homo sapiens mRNA; cDNA DKFZp686L09244 (from clone DKFZp686L09244) Length = 11482 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ggcagtgaccatctgcctga 425 |||||||||||||||||||| Sbjct: 1072 ggcagtgaccatctgcctga 1091
>gb|BC103242.1| Bos taurus serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:128707 IMAGE:7987768), complete cds Length = 2117 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaacca 44 |||||||| ||||||||||| || ||||| || || |||||||| Sbjct: 990 aactttgctgtgttcccatccctgcaggggggcccccacaacca 1033
>gb|AC103858.2| Homo sapiens chromosome 15, clone RP11-761I4, complete sequence Length = 194996 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ggcagtgaccatctgcctga 425 |||||||||||||||||||| Sbjct: 167510 ggcagtgaccatctgcctga 167491
>gb|AC109809.3| Homo sapiens chromosome 15, clone CTD-2240J17, complete sequence Length = 116491 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ggcagtgaccatctgcctga 425 |||||||||||||||||||| Sbjct: 76568 ggcagtgaccatctgcctga 76587
>ref|XM_937643.1| PREDICTED: Homo sapiens transmembrane channel-like 3 (TMC3), mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ggcagtgaccatctgcctga 425 |||||||||||||||||||| Sbjct: 936 ggcagtgaccatctgcctga 955
>ref|XM_930010.1| PREDICTED: Homo sapiens transmembrane channel-like 3 (TMC3), mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ggcagtgaccatctgcctga 425 |||||||||||||||||||| Sbjct: 936 ggcagtgaccatctgcctga 955
>gb|DQ274179.2| Solanum tuberosum patatin-rich BAC 14K07, complete sequence Length = 154382 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ctcttggcttgactggaaac 238 |||||||||||||||||||| Sbjct: 108128 ctcttggcttgactggaaac 108147
>dbj|BS000094.1| Pan troglodytes chromosome 22 clone:PTB-240N13, map 22, complete sequences Length = 155513 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ttacattgaacaagaatgct 289 |||||||||||||||||||| Sbjct: 59447 ttacattgaacaagaatgct 59428
>dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, section 34/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ttacattgaacaagaatgct 289 |||||||||||||||||||| Sbjct: 8371 ttacattgaacaagaatgct 8352
>dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-132H24, complete sequence Length = 136804 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ttacattgaacaagaatgct 289 |||||||||||||||||||| Sbjct: 30488 ttacattgaacaagaatgct 30469
>dbj|AB009589.1| Homo sapiens gene for Osteomodulin, complete cds Length = 12414 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 ttcctccaccaggcagtgaccatc 418 ||||||| |||||||||||||||| Sbjct: 7475 ttcctcccccaggcagtgaccatc 7498
>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence Length = 207333 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 atgaagtacaaggagtagga 582 |||||||||||||||||||| Sbjct: 200617 atgaagtacaaggagtagga 200636
>ref|NM_001034282.1| Bos taurus serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), mRNA Length = 2117 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 1 aactttgcggtgttcccatcgctccagggtggtcctcacaacca 44 |||||||| ||||||||||| || ||||| || || |||||||| Sbjct: 990 aactttgctgtgttcccatccctgcaggggggcccccacaacca 1033
>dbj|AP000461.1| Homo sapiens genomic DNA, chromosome 21q21.2, clone:f15D6, complete sequence Length = 22325 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ttacattgaacaagaatgct 289 |||||||||||||||||||| Sbjct: 19090 ttacattgaacaagaatgct 19109 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,753,690 Number of Sequences: 3902068 Number of extensions: 4753690 Number of successful extensions: 89654 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89085 Number of HSP's gapped (non-prelim): 551 length of query: 604 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 581 effective length of database: 17,143,297,704 effective search space: 9960255966024 effective search space used: 9960255966024 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
