ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8f13 |
|---|---|
| Clone Library Name | barley_pub |
>AMP2A_ARATH (Q9FV49) Methionine aminopeptidase 2A (EC 3.4.11.18) (MetAP 2A)| (MAP 2A) (Peptidase M 2A) Length = 441 Score = 176 bits (446), Expect = 3e-44 Identities = 86/117 (73%), Positives = 94/117 (80%) Frame = +3 Query: 156 EDGAGAPXXXXXXXXXXXXXXXXDSLQQTDPPSIPVDELFPSGDFPEGEIQQYKDDNLWR 335 EDG A SLQQTDPPSIPV ELFPSGDFP+GEIQQY DDNLWR Sbjct: 53 EDGLKAEASTKKKKKKSKSKKKKSSLQQTDPPSIPVLELFPSGDFPQGEIQQYNDDNLWR 112 Query: 336 TTSEEKRELERLQKPMYNSVRRAAEVHRQVRKYMRSIIKPGMLMMELCETLENMVRK 506 TTSEEKRE+ERLQKP+YNS+R+AAEVHRQVRKYMRSI+KPGMLM++LCETLEN VRK Sbjct: 113 TTSEEKREMERLQKPIYNSLRQAAEVHRQVRKYMRSILKPGMLMIDLCETLENTVRK 169
>AMP2B_ARATH (Q56Y85) Methionine aminopeptidase 2B (EC 3.4.11.18) (MetAP 2B)| (MAP 2B) (Peptidase M 2B) Length = 439 Score = 169 bits (429), Expect = 3e-42 Identities = 79/91 (86%), Positives = 87/91 (95%) Frame = +3 Query: 234 QQTDPPSIPVDELFPSGDFPEGEIQQYKDDNLWRTTSEEKRELERLQKPMYNSVRRAAEV 413 QQTDPPSIPV ELFPSG+FPEGEIQ+YKDDNLWRTTSEEKRELER +KP+YNSVRRAAEV Sbjct: 77 QQTDPPSIPVVELFPSGEFPEGEIQEYKDDNLWRTTSEEKRELERFEKPIYNSVRRAAEV 136 Query: 414 HRQVRKYMRSIIKPGMLMMELCETLENMVRK 506 HRQVRKY+RSI+KPGMLM ++CETLEN VRK Sbjct: 137 HRQVRKYVRSIVKPGMLMTDICETLENTVRK 167
>AMPM2_RAT (P38062) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 103 bits (256), Expect = 3e-22 Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 5/95 (5%) Frame = +3 Query: 237 QTDPPSIPVDELFPSGDFPEGEIQQYKDDN-----LWRTTSEEKRELERLQKPMYNSVRR 401 QTDPPS+P+ +L+P+G FP+G+ +Y WRTTSEEK+ L++ + ++N R Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFRE 171 Query: 402 AAEVHRQVRKYMRSIIKPGMLMMELCETLENMVRK 506 AAE HRQVRKY+ S IKPGM M+E+CE LE+ RK Sbjct: 172 AAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRK 206
>AMPM2_MOUSE (O08663) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 103 bits (256), Expect = 3e-22 Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 5/95 (5%) Frame = +3 Query: 237 QTDPPSIPVDELFPSGDFPEGEIQQYKDDN-----LWRTTSEEKRELERLQKPMYNSVRR 401 QTDPPS+P+ +L+P+G FP+G+ +Y WRTTSEEK+ L++ + ++N R Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFRE 171 Query: 402 AAEVHRQVRKYMRSIIKPGMLMMELCETLENMVRK 506 AAE HRQVRKY+ S IKPGM M+E+CE LE+ RK Sbjct: 172 AAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRK 206
>AMPM2_HUMAN (P50579) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 103 bits (256), Expect = 3e-22 Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 5/95 (5%) Frame = +3 Query: 237 QTDPPSIPVDELFPSGDFPEGEIQQYKDDN-----LWRTTSEEKRELERLQKPMYNSVRR 401 QTDPPS+P+ +L+P+G FP+G+ +Y WRTTSEEK+ L++ + ++N R Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFRE 171 Query: 402 AAEVHRQVRKYMRSIIKPGMLMMELCETLENMVRK 506 AAE HRQVRKY+ S IKPGM M+E+CE LE+ RK Sbjct: 172 AAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRK 206
>AMPM2_YEAST (P38174) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) Length = 421 Score = 72.4 bits (176), Expect = 7e-13 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 5/87 (5%) Frame = +3 Query: 261 VDELFPSGDFPEGEIQQYKDD-NLWRTTSEE----KRELERLQKPMYNSVRRAAEVHRQV 425 ++ LFP G +PEG Y D NL RTT EE KR+LER + +N VR+ AE+HR+V Sbjct: 58 IELLFPDGKYPEGAWMDYHQDFNLQRTTVEESRYLKRDLERAEH--WNDVRKGAEIHRRV 115 Query: 426 RKYMRSIIKPGMLMMELCETLENMVRK 506 R+ ++ I PGM +M++ + +EN RK Sbjct: 116 RRAIKDRIVPGMKLMDIADMIENTTRK 142
>AMPM2_ENCHE (Q6XMH6) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 48.5 bits (114), Expect = 1e-05 Identities = 26/83 (31%), Positives = 46/83 (55%) Frame = +3 Query: 255 IPVDELFPSGDFPEGEIQQYKDDNLWRTTSEEKRELERLQKPMYNSVRRAAEVHRQVRKY 434 +P++ L G + +G + K+ + TT + + RRAAE HR+VR Sbjct: 12 LPIEFLPRDGAYRKGRLLDSKNAEVENTTESD----------ILQDARRAAEAHRRVRYK 61 Query: 435 MRSIIKPGMLMMELCETLENMVR 503 ++SIIKPGM ++E+ +++E+ R Sbjct: 62 VQSIIKPGMTLLEIVKSIEDSTR 84
>AMPM2_ENCIN (Q6XMH7) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 45.4 bits (106), Expect = 9e-05 Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Frame = +3 Query: 249 PSIPVDELFPSGD-FPEGEIQQYKDDNLWRTTSEEKRELERLQKPMYNSVRRAAEVHRQV 425 P +P+ E P GD + +G++ K + + TT + + RRAAE HR+ Sbjct: 10 PKLPI-EFLPKGDCYKKGKLFGPKGEEIENTTDCD----------LLQDARRAAEAHRRA 58 Query: 426 RKYMRSIIKPGMLMMELCETLENMVR 503 R ++SII+PG+ ++E+ ++E+ R Sbjct: 59 RYKVQSIIRPGITLLEIVRSIEDSTR 84
>AMPM2_ENCCU (Q8SR45) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/83 (24%), Positives = 44/83 (53%) Frame = +3 Query: 255 IPVDELFPSGDFPEGEIQQYKDDNLWRTTSEEKRELERLQKPMYNSVRRAAEVHRQVRKY 434 +P++ L G + +G++ ++ + T + + RRAAE HR+ R Sbjct: 12 LPIEFLPKDGVYGKGKLFDSRNMEIENFTESD----------ILQDARRAAEAHRRARYR 61 Query: 435 MRSIIKPGMLMMELCETLENMVR 503 ++SI++PG+ ++E+ ++E+ R Sbjct: 62 VQSIVRPGITLLEIVRSIEDSTR 84
>NINAC_DROME (P10676) Neither inactivation nor afterpotential protein C (EC| 2.7.11.1) Length = 1501 Score = 31.6 bits (70), Expect = 1.3 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = +3 Query: 246 PPSIPVDELFPSGDFPEGEIQQYKD-DNLWRTTSEEKRELERLQK 377 PP +P +L D PEG +++Y++ +N+ R ++LE ++K Sbjct: 552 PPEVPPSKLKYRRDDPEGNVERYREFENILRDIDFNHKQLETVRK 596
>AMPM_METJA (Q58725) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 294 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/41 (29%), Positives = 25/41 (60%) Frame = +3 Query: 384 YNSVRRAAEVHRQVRKYMRSIIKPGMLMMELCETLENMVRK 506 Y + A ++ +VR+ +I PG+ ++E+ E +EN +R+ Sbjct: 6 YEKIIEAGKIASKVREEAVKLIXPGVKLLEVAEFVENRIRE 46
>AMPM_PYRKO (Q5JGD1) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +3 Query: 399 RAAEVHRQVRKYMRSIIKPGMLMMELCETLENMV 500 +A E+ RQV+K + +IKPG + ++ E +E + Sbjct: 9 KAGEIARQVKKEVVDLIKPGAKLYDIAEFVERRI 42
>CDPK1_PLAFK (P62343) Calcium-dependent protein kinase 1 (EC 2.7.11.1) (PfCPK)| (PfCDPK1) Length = 523 Score = 29.3 bits (64), Expect = 6.4 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = +3 Query: 312 YKDDNLWRTTSEEKRELERLQKPM-YNSVRRAAEV--HRQVRKYMRSIIKPGMLMMELCE 482 Y D N W+ SEE +EL +L YN A E + ++KY +I K LC Sbjct: 284 YFDFNDWKNISEEAKELIKLMLTYDYNKRITAKEALNSKWIKKYANNINKSD--QKTLCG 341 Query: 483 TLENM 497 L NM Sbjct: 342 ALSNM 346
>CDPK1_PLAF7 (P62344) Calcium-dependent protein kinase 1 (EC 2.7.11.1)| Length = 523 Score = 29.3 bits (64), Expect = 6.4 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = +3 Query: 312 YKDDNLWRTTSEEKRELERLQKPM-YNSVRRAAEV--HRQVRKYMRSIIKPGMLMMELCE 482 Y D N W+ SEE +EL +L YN A E + ++KY +I K LC Sbjct: 284 YFDFNDWKNISEEAKELIKLMLTYDYNKRITAKEALNSKWIKKYANNINKSD--QKTLCG 341 Query: 483 TLENM 497 L NM Sbjct: 342 ALSNM 346
>YMS4_MAIZE (P10580) Hypothetical 29 kDa protein in mitochondrial S-1 DNA (URF| 4) Length = 256 Score = 29.3 bits (64), Expect = 6.4 Identities = 11/36 (30%), Positives = 21/36 (58%) Frame = +1 Query: 325 IYGEQLAKKRGNWRDYKNRCTILFAELQKSIDRYEN 432 IY ++ +G W Y L++ LQ+++++YEN Sbjct: 13 IYRADFSEYKGLWSLYNRATDNLYSHLQRALEKYEN 48
>Y038_BORBU (O51067) Hypothetical protein BB0038| Length = 505 Score = 28.9 bits (63), Expect = 8.3 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = +3 Query: 306 QQYKDDNLWRTTSEEKRELERLQKPMYNSVRRAAE 410 +Q + NL+R S+E ++E + KP YN++ +A+ Sbjct: 307 RQSSEINLFRKNSQEVAKIEYISKPAYNTLNVSAK 341 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,562,461 Number of Sequences: 219361 Number of extensions: 911667 Number of successful extensions: 2911 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2839 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2906 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
