| Clone Name | bags8f13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115K11, full insert sequence Length = 1791 Score = 264 bits (133), Expect = 3e-67 Identities = 241/277 (87%) Strand = Plus / Plus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||||||||| |||||||||||||| || | || || |||||||| ||||||||||| Sbjct: 439 cttcagcagactgatcctccatcaattcccatagacgaacttttcccatcaggagatttc 498 Query: 291 cctgagggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaa 350 || ||||| ||||| |||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 499 cccgagggtgaaattcagcaatataaggatgataacttatggagaacaactagtgaggaa 558 Query: 351 aagagggaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaa 410 ||||||||||||||| | |||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 559 aagagggaactggagcggctacaaaagccgatgtacaatgctgttcgccgagcagcagaa 618 Query: 411 gtccatcgacaggtacgaaaatacatgaggagcattataaagcctggaatgctaatgatg 470 || ||| ||||||| || || | |||||||||||| | |||||||||||||||||||| Sbjct: 619 gttcatagacaggtccggaagcatatgaggagcattttgaagcctggaatgctaatgatt 678 Query: 471 gaactatgcgagactttggaaaacatggttcggaaac 507 || ||||| || ||||||||||| |||||| |||||| Sbjct: 679 gatctatgtgaaactttggaaaatatggttaggaaac 715 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 3/58 (5%) Strand = Plus / Plus Query: 111 tcaccaccagcagatgatgatgat---gcacaagtggatggtccatctgaagatggag 165 |||||||||| ||||||||||||| || |||| ||||||||||||| ||||||||| Sbjct: 322 tcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggag 379
>gb|AY105027.1| Zea mays PCO081602 mRNA sequence Length = 1570 Score = 260 bits (131), Expect = 4e-66 Identities = 242/279 (86%) Strand = Plus / Plus Query: 229 cccttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatt 288 ||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||| | Sbjct: 472 cccttcaacagacagatcctccatcaatacctgttgatgagcttttcccctcaggagaat 531 Query: 289 ttcctgagggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaag 348 |||| ||||| |||||||| |||||||||||||| ||| | |||||||||||||| || | Sbjct: 532 ttccagagggcgaaatccaacaatacaaggatgacaatctgtggagaacaactagtgagg 591 Query: 349 aaaagagggaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcag 408 |||||||||| ||||| |||| ||||| || || ||||| |||||||||| ||| |||| Sbjct: 592 aaaagagggacctggaacgactgcaaaagccaatatacaactctgttcgccaagcagcag 651 Query: 409 aagtccatcgacaggtacgaaaatacatgaggagcattataaagcctggaatgctaatga 468 |||| ||| ||||||| || ||||| ||||||||||| ||||| ||||||||| ||||| Sbjct: 652 aagttcatagacaggtgcggaaatatatgaggagcatcataaaacctggaatgttaatgg 711 Query: 469 tggaactatgcgagactttggaaaacatggttcggaaac 507 | || ||||| ||||| |||||||||||||| ||||||| Sbjct: 712 ttgatctatgtgagacattggaaaacatggtccggaaac 750 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 123 gatgatgatgatgcacaagtggatggtccatctgaagatggagcag 168 ||||||||||| ||||||| |||||||||||| |||||||||||| Sbjct: 372 gatgatgatgaagcacaagctgatggtccatctcaagatggagcag 417
>ref|XM_483588.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 224 bits (113), Expect = 2e-55 Identities = 230/269 (85%) Strand = Plus / Plus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||||||||||||||||||||| |||||||| ||||| || ||||| |||||||| ||| Sbjct: 295 cttcagcagacagatcctccatcgatccctgttgatgaactcttcccatcaggagaattt 354 Query: 291 cctgagggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaa 350 |||||||| || ||||| || || ||||||||||| |||||||| |||||||| |||||| Sbjct: 355 cctgagggtgagatccaacactataaggatgataacttatggaggacaactagtgaagaa 414 Query: 351 aagagggaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaa 410 ||| |||||||||| ||| | ||||| || ||||||||| ||||||| || || |||||| Sbjct: 415 aagcgggaactggaaagattgcaaaagccaatgtacaatgctgttcgtcgggcagcagaa 474 Query: 411 gtccatcgacaggtacgaaaatacatgaggagcattataaagcctggaatgctaatgatg 470 || ||| ||||||| || || || ||||| |||||| | ||||| || ||||||||||| Sbjct: 475 gttcatagacaggtccggaagtatatgagaagcattttgaagcccgggatgctaatgatt 534 Query: 471 gaactatgcgagactttggaaaacatggt 499 || ||||| || ||||||||||||||||| Sbjct: 535 gatctatgtgaaactttggaaaacatggt 563 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 98 aggagctcagtcgtcaccaccagcagatgatgatgatgcacaagtggatggtccatctga 157 |||||||| || |||||||||| | |||||||||||||| ||||||| ||| ||| | Sbjct: 138 aggagctccgtactcaccaccagaaaatgatgatgatgcagaagtggactatccgtctca 197 Query: 158 agatggagca 167 |||||||||| Sbjct: 198 agatggagca 207
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 127 bits (64), Expect = 4e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 327 ttatggagaacaactagcgaagaaaagagggaactggagagactacaaaaaccgatgtac 386 ||||||||||||||||| || |||||||||||||||||| | |||||||| ||||||||| Sbjct: 66405 ttatggagaacaactagtgaggaaaagagggaactggagcggctacaaaagccgatgtac 66464 Query: 387 aattctgttcgccgagctgcagaagtccatcgacaggtac 426 ||| ||||||||||||| |||||||| ||| ||||||||| Sbjct: 66465 aatgctgttcgccgagcagcagaagttcatagacaggtac 66504 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 435 atgaggagcattataaagcctggaatgctaatgatggaactatgcgagactttggaaaac 494 |||||||||||| | |||||||||||||||||||| || ||||| || ||||||||||| Sbjct: 66617 atgaggagcattttgaagcctggaatgctaatgattgatctatgtgaaactttggaaaat 66676 Query: 495 atggttcggaaac 507 |||||| |||||| Sbjct: 66677 atggttaggaaac 66689 Score = 79.8 bits (40), Expect = 8e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||||||||| |||||||||||||| || | || || |||||||| ||||||||||| Sbjct: 66078 cttcagcagactgatcctccatcaattcccatagacgaacttttcccatcaggagatttc 66137 Query: 291 cctgagggagaaatccagcaatacaaggatga 322 || ||||| ||||| |||||||| |||||||| Sbjct: 66138 cccgagggtgaaattcagcaatataaggatga 66169 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 3/58 (5%) Strand = Plus / Plus Query: 111 tcaccaccagcagatgatgatgat---gcacaagtggatggtccatctgaagatggag 165 |||||||||| ||||||||||||| || |||| ||||||||||||| ||||||||| Sbjct: 65753 tcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggag 65810
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 127 bits (64), Expect = 4e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 327 ttatggagaacaactagcgaagaaaagagggaactggagagactacaaaaaccgatgtac 386 ||||||||||||||||| || |||||||||||||||||| | |||||||| ||||||||| Sbjct: 26941438 ttatggagaacaactagtgaggaaaagagggaactggagcggctacaaaagccgatgtac 26941497 Query: 387 aattctgttcgccgagctgcagaagtccatcgacaggtac 426 ||| ||||||||||||| |||||||| ||| ||||||||| Sbjct: 26941498 aatgctgttcgccgagcagcagaagttcatagacaggtac 26941537 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 435 atgaggagcattataaagcctggaatgctaatgatggaactatgcgagactttggaaaac 494 |||||||||||| | |||||||||||||||||||| || ||||| || ||||||||||| Sbjct: 26941650 atgaggagcattttgaagcctggaatgctaatgattgatctatgtgaaactttggaaaat 26941709 Query: 495 atggttcggaaac 507 |||||| |||||| Sbjct: 26941710 atggttaggaaac 26941722 Score = 79.8 bits (40), Expect = 8e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||||||||| |||||||||||||| || | || || |||||||| ||||||||||| Sbjct: 26941111 cttcagcagactgatcctccatcaattcccatagacgaacttttcccatcaggagatttc 26941170 Query: 291 cctgagggagaaatccagcaatacaaggatga 322 || ||||| ||||| |||||||| |||||||| Sbjct: 26941171 cccgagggtgaaattcagcaatataaggatga 26941202 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 3/58 (5%) Strand = Plus / Plus Query: 111 tcaccaccagcagatgatgatgat---gcacaagtggatggtccatctgaagatggag 165 |||||||||| ||||||||||||| || |||| ||||||||||||| ||||||||| Sbjct: 26940786 tcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggag 26940843
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 127 bits (64), Expect = 4e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 327 ttatggagaacaactagcgaagaaaagagggaactggagagactacaaaaaccgatgtac 386 ||||||||||||||||| || |||||||||||||||||| | |||||||| ||||||||| Sbjct: 26869608 ttatggagaacaactagtgaggaaaagagggaactggagcggctacaaaagccgatgtac 26869667 Query: 387 aattctgttcgccgagctgcagaagtccatcgacaggtac 426 ||| ||||||||||||| |||||||| ||| ||||||||| Sbjct: 26869668 aatgctgttcgccgagcagcagaagttcatagacaggtac 26869707 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 435 atgaggagcattataaagcctggaatgctaatgatggaactatgcgagactttggaaaac 494 |||||||||||| | |||||||||||||||||||| || ||||| || ||||||||||| Sbjct: 26869820 atgaggagcattttgaagcctggaatgctaatgattgatctatgtgaaactttggaaaat 26869879 Query: 495 atggttcggaaac 507 |||||| |||||| Sbjct: 26869880 atggttaggaaac 26869892 Score = 79.8 bits (40), Expect = 8e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||||||||| |||||||||||||| || | || || |||||||| ||||||||||| Sbjct: 26869281 cttcagcagactgatcctccatcaattcccatagacgaacttttcccatcaggagatttc 26869340 Query: 291 cctgagggagaaatccagcaatacaaggatga 322 || ||||| ||||| |||||||| |||||||| Sbjct: 26869341 cccgagggtgaaattcagcaatataaggatga 26869372 Score = 56.0 bits (28), Expect = 1e-04 Identities = 51/58 (87%), Gaps = 3/58 (5%) Strand = Plus / Plus Query: 111 tcaccaccagcagatgatgatgat---gcacaagtggatggtccatctgaagatggag 165 |||||||||| ||||||||||||| || |||| ||||||||||||| ||||||||| Sbjct: 26868956 tcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggag 26869013
>gb|AF250964.1|AF250964 Arabidopsis thaliana methionine aminopeptidase-like protein mRNA, complete cds Length = 1525 Score = 103 bits (52), Expect = 6e-19 Identities = 154/188 (81%) Strand = Plus / Plus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||| ||||| |||||||| ||||| ||||| |||||| |||||||| ||||||||| Sbjct: 263 cttcaacagactgatcctccttcaattcctgttcttgagctcttcccttctggagatttt 322 Query: 291 cctgagggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaa 350 ||| | || |||||||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct: 323 cctcaaggtgaaatccaacagtacaatgatgataatttgtggagaacaacatctgaagag 382 Query: 351 aagagggaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaa 410 ||||| || ||||||| || ||||| ||||| || |||||| |||||| ||| || ||| Sbjct: 383 aagagagagatggagaggctgcaaaagccgatatataattctcttcgccaagcagcggaa 442 Query: 411 gtccatcg 418 || ||||| Sbjct: 443 gttcatcg 450
>ref|NM_129981.2| Arabidopsis thaliana MAP2A (METHIONINE AMINOPEPTIDASE 2A); methionyl aminopeptidase AT2G44180 (MAP2A) mRNA, complete cds Length = 1551 Score = 95.6 bits (48), Expect = 1e-16 Identities = 153/188 (81%) Strand = Plus / Plus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||| ||||| |||||||| ||||| ||||| |||||| |||||||| ||||||||| Sbjct: 290 cttcaacagactgatcctccttcaattcctgttcttgagctcttcccttctggagatttt 349 Query: 291 cctgagggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaa 350 ||| | || |||||||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct: 350 cctcaaggtgaaatccaacagtacaatgatgataatttgtggagaacaacatctgaagag 409 Query: 351 aagagggaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaa 410 ||||| || ||||||| || ||||| ||||| || || ||| |||||| ||| || ||| Sbjct: 410 aagagagagatggagaggctgcaaaagccgatatataactctcttcgccaagcagcggaa 469 Query: 411 gtccatcg 418 || ||||| Sbjct: 470 gttcatcg 477
>gb|BT006476.1| Arabidopsis thaliana At2g44180 gene, complete cds Length = 1326 Score = 95.6 bits (48), Expect = 1e-16 Identities = 153/188 (81%) Strand = Plus / Plus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||| ||||| |||||||| ||||| ||||| |||||| |||||||| ||||||||| Sbjct: 232 cttcaacagactgatcctccttcaattcctgttcttgagctcttcccttctggagatttt 291 Query: 291 cctgagggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaa 350 ||| | || |||||||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct: 292 cctcaaggtgaaatccaacagtacaatgatgataatttgtggagaacaacatctgaagag 351 Query: 351 aagagggaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaa 410 ||||| || ||||||| || ||||| ||||| || || ||| |||||| ||| || ||| Sbjct: 352 aagagagagatggagaggctgcaaaagccgatatataactctcttcgccaagcagcggaa 411 Query: 411 gtccatcg 418 || ||||| Sbjct: 412 gttcatcg 419
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||||||||||||||||||||| |||||||| ||||| || ||||| |||||||| ||| Sbjct: 27118948 cttcagcagacagatcctccatcgatccctgttgatgaactcttcccatcaggagaattt 27118889 Query: 291 cctgagggagaaatccagcaatacaaggatga 322 |||||||| || ||||| || || |||||||| Sbjct: 27118888 cctgagggtgagatccaacactataaggatga 27118857 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 435 atgaggagcattataaagcctggaatgctaatgatggaactatgcgagactttggaaaac 494 ||||| |||||| | ||||| || ||||||||||| || ||||| || |||||||||||| Sbjct: 27118459 atgagaagcattttgaagcccgggatgctaatgattgatctatgtgaaactttggaaaac 27118400 Query: 495 atggt 499 ||||| Sbjct: 27118399 atggt 27118395 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 98 aggagctcagtcgtcaccaccagcagatgatgatgatgcacaagtggatggtccatctga 157 |||||||| || |||||||||| | |||||||||||||| ||||||| ||| ||| | Sbjct: 27119283 aggagctccgtactcaccaccagaaaatgatgatgatgcagaagtggactatccgtctca 27119224 Query: 158 agatggagca 167 |||||||||| Sbjct: 27119223 agatggagca 27119214
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||||||||||||||||||||| |||||||| ||||| || ||||| |||||||| ||| Sbjct: 19981 cttcagcagacagatcctccatcgatccctgttgatgaactcttcccatcaggagaattt 19922 Query: 291 cctgagggagaaatccagcaatacaaggatga 322 |||||||| || ||||| || || |||||||| Sbjct: 19921 cctgagggtgagatccaacactataaggatga 19890 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 435 atgaggagcattataaagcctggaatgctaatgatggaactatgcgagactttggaaaac 494 ||||| |||||| | ||||| || ||||||||||| || ||||| || |||||||||||| Sbjct: 19492 atgagaagcattttgaagcccgggatgctaatgattgatctatgtgaaactttggaaaac 19433 Query: 495 atggt 499 ||||| Sbjct: 19432 atggt 19428 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 98 aggagctcagtcgtcaccaccagcagatgatgatgatgcacaagtggatggtccatctga 157 |||||||| || |||||||||| | |||||||||||||| ||||||| ||| ||| | Sbjct: 20316 aggagctccgtactcaccaccagaaaatgatgatgatgcagaagtggactatccgtctca 20257 Query: 158 agatggagca 167 |||||||||| Sbjct: 20256 agatggagca 20247
>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1211_G06 Length = 96421 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||||||||||||||||||||| |||||||| ||||| || ||||| |||||||| ||| Sbjct: 90035 cttcagcagacagatcctccatcgatccctgttgatgaactcttcccatcaggagaattt 89976 Query: 291 cctgagggagaaatccagcaatacaaggatga 322 |||||||| || ||||| || || |||||||| Sbjct: 89975 cctgagggtgagatccaacactataaggatga 89944 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 435 atgaggagcattataaagcctggaatgctaatgatggaactatgcgagactttggaaaac 494 ||||| |||||| | ||||| || ||||||||||| || ||||| || |||||||||||| Sbjct: 89546 atgagaagcattttgaagcccgggatgctaatgattgatctatgtgaaactttggaaaac 89487 Query: 495 atggt 499 ||||| Sbjct: 89486 atggt 89482 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 98 aggagctcagtcgtcaccaccagcagatgatgatgatgcacaagtggatggtccatctga 157 |||||||| || |||||||||| | |||||||||||||| ||||||| ||| ||| | Sbjct: 90370 aggagctccgtactcaccaccagaaaatgatgatgatgcagaagtggactatccgtctca 90311 Query: 158 agatggagca 167 |||||||||| Sbjct: 90310 agatggagca 90301
>ref|NM_180394.1| Arabidopsis thaliana MAP2B (METHIONINE AMINOPEPTIDASE 2B); methionyl aminopeptidase AT3G59990 (MAP2B) transcript variant AT3G59990.2 mRNA, complete cds Length = 1686 Score = 89.7 bits (45), Expect = 8e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 237 cagacagatcctccatcaatccctgtggatgagcttttcccttcaggagattttcctgag 296 ||||| ||||| || ||||| ||||| | |||||| ||||| |||||||| |||||||| Sbjct: 396 cagactgatccaccttcaattcctgtcgttgagctcttcccatcaggagagtttcctgaa 455 Query: 297 ggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaaaagagg 356 || |||||||| | || |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 456 ggtgaaatccaagagtataaggatgataatctttggagaacaacatctgaagagaagaga 515 Query: 357 gaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaagtccat 416 || |||||| | | |||| || || || || ||||||||||||||||||||||| ||| Sbjct: 516 gagctggagcgttttgaaaagccaatatataactctgttcgccgagctgcagaagttcat 575 Query: 417 cgacaggtacgaaaata 433 || ||||| || ||||| Sbjct: 576 cgccaggttcgtaaata 592
>ref|NM_001035821.1| Arabidopsis thaliana MAP2B (METHIONINE AMINOPEPTIDASE 2B); methionyl aminopeptidase AT3G59990 (MAP2B) transcript variant AT3G59990.3 mRNA, complete cds Length = 1594 Score = 89.7 bits (45), Expect = 8e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 237 cagacagatcctccatcaatccctgtggatgagcttttcccttcaggagattttcctgag 296 ||||| ||||| || ||||| ||||| | |||||| ||||| |||||||| |||||||| Sbjct: 304 cagactgatccaccttcaattcctgtcgttgagctcttcccatcaggagagtttcctgaa 363 Query: 297 ggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaaaagagg 356 || |||||||| | || |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 364 ggtgaaatccaagagtataaggatgataatctttggagaacaacatctgaagagaagaga 423 Query: 357 gaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaagtccat 416 || |||||| | | |||| || || || || ||||||||||||||||||||||| ||| Sbjct: 424 gagctggagcgttttgaaaagccaatatataactctgttcgccgagctgcagaagttcat 483 Query: 417 cgacaggtacgaaaata 433 || ||||| || ||||| Sbjct: 484 cgccaggttcgtaaata 500
>ref|NM_115862.2| Arabidopsis thaliana MAP2B (METHIONINE AMINOPEPTIDASE 2B); methionyl aminopeptidase AT3G59990 (MAP2B) transcript variant AT3G59990.1 mRNA, complete cds Length = 1620 Score = 89.7 bits (45), Expect = 8e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 237 cagacagatcctccatcaatccctgtggatgagcttttcccttcaggagattttcctgag 296 ||||| ||||| || ||||| ||||| | |||||| ||||| |||||||| |||||||| Sbjct: 330 cagactgatccaccttcaattcctgtcgttgagctcttcccatcaggagagtttcctgaa 389 Query: 297 ggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaaaagagg 356 || |||||||| | || |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 390 ggtgaaatccaagagtataaggatgataatctttggagaacaacatctgaagagaagaga 449 Query: 357 gaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaagtccat 416 || |||||| | | |||| || || || || ||||||||||||||||||||||| ||| Sbjct: 450 gagctggagcgttttgaaaagccaatatataactctgttcgccgagctgcagaagttcat 509 Query: 417 cgacaggtacgaaaata 433 || ||||| || ||||| Sbjct: 510 cgccaggttcgtaaata 526
>gb|BT000063.1| Arabidopsis thaliana putative protein (At3g59990) mRNA, complete cds Length = 1416 Score = 89.7 bits (45), Expect = 8e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 237 cagacagatcctccatcaatccctgtggatgagcttttcccttcaggagattttcctgag 296 ||||| ||||| || ||||| ||||| | |||||| ||||| |||||||| |||||||| Sbjct: 232 cagactgatccaccttcaattcctgtcgttgagctcttcccatcaggagagtttcctgaa 291 Query: 297 ggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaaaagagg 356 || |||||||| | || |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 292 ggtgaaatccaagagtataaggatgataatctttggagaacaacatctgaagagaagaga 351 Query: 357 gaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaagtccat 416 || |||||| | | |||| || || || || ||||||||||||||||||||||| ||| Sbjct: 352 gagctggagcgttttgaaaagccaatatataactctgttcgccgagctgcagaagttcat 411 Query: 417 cgacaggtacgaaaata 433 || ||||| || ||||| Sbjct: 412 cgccaggttcgtaaata 428
>gb|AY065161.1| Arabidopsis thaliana putative protein (F24G16.26) mRNA, complete cds Length = 1637 Score = 89.7 bits (45), Expect = 8e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 237 cagacagatcctccatcaatccctgtggatgagcttttcccttcaggagattttcctgag 296 ||||| ||||| || ||||| ||||| | |||||| ||||| |||||||| |||||||| Sbjct: 350 cagactgatccaccttcaattcctgtcgttgagctcttcccatcaggagagtttcctgaa 409 Query: 297 ggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaaaagagg 356 || |||||||| | || |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 410 ggtgaaatccaagagtataaggatgataatctttggagaacaacatctgaagagaagaga 469 Query: 357 gaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaagtccat 416 || |||||| | | |||| || || || || ||||||||||||||||||||||| ||| Sbjct: 470 gagctggagcgttttgaaaagccaatatataactctgttcgccgagctgcagaagttcat 529 Query: 417 cgacaggtacgaaaata 433 || ||||| || ||||| Sbjct: 530 cgccaggttcgtaaata 546
>gb|AF300880.1|AF300880 Arabidopsis thaliana putative methionine aminopeptidase 2 mRNA, complete cds Length = 1686 Score = 89.7 bits (45), Expect = 8e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 237 cagacagatcctccatcaatccctgtggatgagcttttcccttcaggagattttcctgag 296 ||||| ||||| || ||||| ||||| | |||||| ||||| |||||||| |||||||| Sbjct: 396 cagactgatccaccttcaattcctgtcgttgagctcttcccatcaggagagtttcctgaa 455 Query: 297 ggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaaaagagg 356 || |||||||| | || |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 456 ggtgaaatccaagagtataaggatgataatctttggagaacaacatctgaagagaagaga 515 Query: 357 gaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaagtccat 416 || |||||| | | |||| || || || || ||||||||||||||||||||||| ||| Sbjct: 516 gagctggagcgttttgaaaagccaatatataactctgttcgccgagctgcagaagttcat 575 Query: 417 cgacaggtacgaaaata 433 || ||||| || ||||| Sbjct: 576 cgccaggttcgtaaata 592
>gb|AY084710.1| Arabidopsis thaliana clone 115696 mRNA, complete sequence Length = 1615 Score = 89.7 bits (45), Expect = 8e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 237 cagacagatcctccatcaatccctgtggatgagcttttcccttcaggagattttcctgag 296 ||||| ||||| || ||||| ||||| | |||||| ||||| |||||||| |||||||| Sbjct: 330 cagactgatccaccttcaattcctgtcgttgagctcttcccatcaggagagtttcctgaa 389 Query: 297 ggagaaatccagcaatacaaggatgataatttatggagaacaactagcgaagaaaagagg 356 || |||||||| | || |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 390 ggtgaaatccaagagtataaggatgataatctttggagaacaacatctgaagagaagaga 449 Query: 357 gaactggagagactacaaaaaccgatgtacaattctgttcgccgagctgcagaagtccat 416 || |||||| | | |||| || || || || ||||||||||||||||||||||| ||| Sbjct: 450 gagctggagcgttttgaaaagccaatatataactctgttcgccgagctgcagaagttcat 509 Query: 417 cgacaggtacgaaaata 433 || ||||| || ||||| Sbjct: 510 cgccaggttcgtaaata 526
>dbj|AK108972.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-E02, full insert sequence Length = 1199 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 372 caaaaaccgatgtacaattctgttcgccgagctgcagaagtccatcgacaggtacgaaaa 431 ||||| || ||||||||| ||||||| || || |||||||| ||| ||||||| || || Sbjct: 727 caaaagccaatgtacaatgctgttcgtcgggcagcagaagttcatagacaggtccggaag 786 Query: 432 tacatgaggagcattataaagcctggaatgctaatgatggaactatgcgagactttggaa 491 || ||||| |||||| | ||||| || ||||||||||| || ||||| || ||||||||| Sbjct: 787 tatatgagaagcattttgaagcccgggatgctaatgattgatctatgtgaaactttggaa 846 Query: 492 aacatggt 499 |||||||| Sbjct: 847 aacatggt 854
>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07, complete sequence Length = 109741 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 231 cttcagcagacagatcctccatcaatccctgtggatgagcttttcccttcaggagatttt 290 ||||| ||||| |||||||| ||||| ||||| |||||| |||||||| ||||||||| Sbjct: 101511 cttcaacagactgatcctccttcaattcctgttcttgagctcttcccttctggagatttt 101452 Query: 291 cctgagggagaaatccagcaatacaaggatga 322 ||| | || |||||||| || ||||| ||||| Sbjct: 101451 cctcaaggtgaaatccaacagtacaatgatga 101420
>emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F24G16 Length = 100906 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 390 tctgttcgccgagctgcagaagtccatcgacaggt 424 ||||||||||||||||||||||| ||||| ||||| Sbjct: 90440 tctgttcgccgagctgcagaagttcatcgccaggt 90406
>gb|AC182701.2| Populus trichocarpa clone Pop1-74K8, complete sequence Length = 93140 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 270 cttttcccttcaggagattttcctgagggagaaatccagcaatacaa 316 ||||||||||| || || |||||||| || ||||||||||||||||| Sbjct: 8249 cttttcccttctggggagtttcctgaaggtgaaatccagcaatacaa 8295
>emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 in linkage group 3, complete sequence Length = 194437 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 acaaacgatattctgaaaaatg 67 |||||||||||||||||||||| Sbjct: 33430 acaaacgatattctgaaaaatg 33451
>gb|AC007018.7| Arabidopsis thaliana chromosome 2 clone F5G3 map RNS1, complete sequence Length = 124326 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 114 ccaccagcagatgatgatgatg 135 |||||||||||||||||||||| Sbjct: 3147 ccaccagcagatgatgatgatg 3126
>gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, complete sequence Length = 197585 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aaaagagggaactggagagact 370 |||||||||||||||||||||| Sbjct: 153051 aaaagagggaactggagagact 153072
>gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, complete sequence Length = 228741 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aaaagagggaactggagagact 370 |||||||||||||||||||||| Sbjct: 145953 aaaagagggaactggagagact 145974
>gb|BC109126.1| Homo sapiens chromosome 10 open reading frame 80, mRNA (cDNA clone MGC:126475 IMAGE:40036085), complete cds Length = 3222 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gagggagaaatccagcaatacaaggatga 322 ||||||||||||||| | ||||||||||| Sbjct: 1340 gagggagaaatccagaactacaaggatga 1368
>ref|XM_508023.1| PREDICTED: Pan troglodytes LOC450722 (LOC450722), mRNA Length = 854 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gagggagaaatccagcaatacaaggatga 322 ||||||||||||||| | ||||||||||| Sbjct: 506 gagggagaaatccagaactacaaggatga 534
>ref|NM_001008723.1| Homo sapiens chromosome 10 open reading frame 80 (C10orf80), mRNA Length = 3313 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gagggagaaatccagcaatacaaggatga 322 ||||||||||||||| | ||||||||||| Sbjct: 1386 gagggagaaatccagaactacaaggatga 1414
>gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome 7, complete sequence Length = 153366 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 gaaaagagggaactggagaga 368 ||||||||||||||||||||| Sbjct: 13944 gaaaagagggaactggagaga 13964
>gb|AC002452.1| Homo sapiens BAC clone GS1-310A5 from 7, complete sequence Length = 177112 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 gaaaagagggaactggagaga 368 ||||||||||||||||||||| Sbjct: 131968 gaaaagagggaactggagaga 131988
>ref|XM_387331.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07155.1) partial mRNA Length = 2034 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 gggggcattgcatgttgggca 35 ||||||||||||||||||||| Sbjct: 1239 gggggcattgcatgttgggca 1219
>emb|AL162742.9| Human DNA sequence from clone RP11-127L20 on chromosome 10 Contains the gene for a novel glutathione-S-transferase gene(LOC119391), a novel gene (KIAA1754), the 5'end of a novel gene (FLJ35908), two novel genes and two CpG islands, complete sequence Length = 178428 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gagggagaaatccagcaatacaaggatga 322 ||||||||||||||| | ||||||||||| Sbjct: 106571 gagggagaaatccagaactacaaggatga 106599
>emb|AL035701.13|HS8B1 Human DNA sequence from clone RP1-8B1 on chromosome 6p11.2-21.1 Contains the ENPP5 gene for ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative function), the ENPP4 gene for ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function) (NPP4, KIAA0879) and a novel gene, complete sequence Length = 126956 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 gctcagtcgtcaccaccagca 122 ||||||||||||||||||||| Sbjct: 4391 gctcagtcgtcaccaccagca 4371
>gb|BC036225.1| Homo sapiens chromosome 10 open reading frame 80, mRNA (cDNA clone MGC:39717 IMAGE:5272786), complete cds Length = 3329 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gagggagaaatccagcaatacaaggatga 322 ||||||||||||||| | ||||||||||| Sbjct: 1388 gagggagaaatccagaactacaaggatga 1416
>dbj|D50659.1| Homo sapiens ACTGP9 pseudogene, gamma-actin mRNA-corresponding region Length = 2659 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gctcagtcgtcaccaccagca 122 ||||||||||||||||||||| Sbjct: 184 gctcagtcgtcaccaccagca 204
>dbj|AK093227.1| Homo sapiens cDNA FLJ35908 fis, clone TESTI2009935 Length = 1773 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gagggagaaatccagcaatacaaggatga 322 ||||||||||||||| | ||||||||||| Sbjct: 1374 gagggagaaatccagaactacaaggatga 1402
>gb|AC018522.7| Homo sapiens chromosome 18, clone RP11-7N19, complete sequence Length = 169578 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 aatccagcaatacaaggatgataat 326 ||||||| ||||||||||||||||| Sbjct: 66753 aatccagaaatacaaggatgataat 66777
>gb|AC109315.3| Homo sapiens chromosome 18, clone RP11-267C16, complete sequence Length = 157966 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 302 aatccagcaatacaaggatgataat 326 ||||||| ||||||||||||||||| Sbjct: 47158 aatccagaaatacaaggatgataat 47134
>gb|AC154911.4| Mus musculus BAC clone RP23-25I3 from chromosome 7, complete sequence Length = 228885 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 gaaaagagggaactggagaga 368 ||||||||||||||||||||| Sbjct: 119357 gaaaagagggaactggagaga 119377
>ref|NG_001069.1| Homo sapiens actin, gamma pseudogene 9 (ACTGP9) on chromosome 6 Length = 2659 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gctcagtcgtcaccaccagca 122 ||||||||||||||||||||| Sbjct: 184 gctcagtcgtcaccaccagca 204
>gb|AF350318.1| Amaranthus tricolor copia-like retrotransposon C10, partial sequence Length = 1284 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 atgatgatgcacaagtggatg 147 ||||||||||||||||||||| Sbjct: 907 atgatgatgcacaagtggatg 927
>emb|BX641120.1|HSM807029 Homo sapiens mRNA; cDNA DKFZp686L1435 (from clone DKFZp686L1435) Length = 3357 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gagggagaaatccagcaatacaaggatga 322 ||||||||||||||| | ||||||||||| Sbjct: 1387 gagggagaaatccagaactacaaggatga 1415
>gb|AC115718.14| Mus musculus chromosome 8, clone RP23-247P3, complete sequence Length = 232751 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 gaagaaaagagggaactggagaga 368 ||||||| |||||||||||||||| Sbjct: 58182 gaagaaatgagggaactggagaga 58159
>gb|AC121275.20| Mus musculus chromosome 8, clone RP24-234C3, complete sequence Length = 158075 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 gaagaaaagagggaactggagaga 368 ||||||| |||||||||||||||| Sbjct: 44843 gaagaaatgagggaactggagaga 44866
>ref|XM_705513.1| Candida albicans SC5314 putative U3 snoRNP protein Utp30 (CaO19.154), mRNA Length = 1086 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 caccaccagcagatgatgatgatg 135 |||||||| ||||||||||||||| Sbjct: 110 caccaccaccagatgatgatgatg 133
>ref|XM_705499.1| Candida albicans SC5314 putative U3 snoRNP protein Utp30 (CaO19.7793), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 caccaccagcagatgatgatgatg 135 |||||||| ||||||||||||||| Sbjct: 110 caccaccaccagatgatgatgatg 133
>gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome 7, complete sequence Length = 223362 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tttcctgagggagaaatcca 307 |||||||||||||||||||| Sbjct: 60123 tttcctgagggagaaatcca 60142
>emb|CT030471.1| Xenopus tropicalis finished cDNA, clone TGas056c05 Length = 5736 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 actacaaaaaccgatgtaca 387 |||||||||||||||||||| Sbjct: 4638 actacaaaaaccgatgtaca 4619
>emb|AL772143.31| Zebrafish DNA sequence from clone CH211-158B22 in linkage group 20, complete sequence Length = 73696 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cagcagatgatgatgatgca 137 |||||||||||||||||||| Sbjct: 58816 cagcagatgatgatgatgca 58835
>gb|AC124173.2| Mus musculus BAC clone RP23-173I4 from 13, complete sequence Length = 207960 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cttttcccttcaggagattt 289 |||||||||||||||||||| Sbjct: 32644 cttttcccttcaggagattt 32625
>emb|AL137141.10| Human DNA sequence from clone RP11-139H14 on chromosome 13 Contains the 5' end of the CPB2 gene for carboxypeptidase B2 (plasma, carboxypeptidase U), 2 novel genes, the LCP1 gene for lymphocyte cytosolic protein 1 (L-plastin) and a CpG Island, complete sequence Length = 180680 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 agattttcctgagggagaaa 303 |||||||||||||||||||| Sbjct: 99292 agattttcctgagggagaaa 99273
>gb|AC104482.2| Sus scrofa clone RP44-423C21, complete sequence Length = 164846 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 aactatgcgagactttggaaaaca 495 |||||||| ||||||||||||||| Sbjct: 50222 aactatgccagactttggaaaaca 50199
>emb|X92421.1|XLRNAP54H X.laevis mRNA for RNA helicase p54 Length = 2491 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 catgaggagcattataaagcctgg 457 |||||| ||||||||||||||||| Sbjct: 383 catgagcagcattataaagcctgg 406
>gb|AC110597.7| Homo sapiens chromosome 18, clone CTD-2541J13, complete sequence Length = 180310 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 gactttggaaaacatggttc 501 |||||||||||||||||||| Sbjct: 153551 gactttggaaaacatggttc 153532
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tgttcgccgagctgcagaag 411 |||||||||||||||||||| Sbjct: 2825892 tgttcgccgagctgcagaag 2825911
>gb|AC009806.9| Homo sapiens chromosome 11, clone RP11-51B23, complete sequence Length = 175223 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gactcccttcagcagacaga 244 |||||||||||||||||||| Sbjct: 89940 gactcccttcagcagacaga 89959
>gb|AC022662.6| Homo sapiens chromosome 18, clone RP11-29O13, complete sequence Length = 144192 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 gactttggaaaacatggttc 501 |||||||||||||||||||| Sbjct: 83926 gactttggaaaacatggttc 83945
>dbj|AB179173.1| Macaca fascicularis testis cDNA clone: QtsA-14113, similar to human lymphocyte cytosolic protein 1 (L-plastin) (LCP1), mRNA, RefSeq: NM_002298.2 Length = 3322 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 agattttcctgagggagaaa 303 |||||||||||||||||||| Sbjct: 316 agattttcctgagggagaaa 297
>gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, region 51B-51C, BAC clone BACR03K23, complete sequence Length = 160346 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 caccaccagcagatgatgatgatg 135 |||||||||||||||| ||||||| Sbjct: 145815 caccaccagcagatgaggatgatg 145792
>gb|AC154537.3| Mus musculus BAC clone RP23-451F20 from chromosome 13, complete sequence Length = 181229 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cttttcccttcaggagattt 289 |||||||||||||||||||| Sbjct: 133759 cttttcccttcaggagattt 133740
>gb|AC084537.1|CBRG26I17 Caenorhabditis briggsae cosmid G26I17, complete sequence Length = 19144 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cagcagatgatgatgatgca 137 |||||||||||||||||||| Sbjct: 11069 cagcagatgatgatgatgca 11050
>emb|BX005044.9| Zebrafish DNA sequence from clone DKEY-7L6 in linkage group 2, complete sequence Length = 174623 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 attttcctgagggagaaatccagc 309 |||||||||||||||||| ||||| Sbjct: 34258 attttcctgagggagaaagccagc 34235
>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete sequence Length = 266851 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 caccaccagcagatgatgatgatg 135 |||||||||||||||| ||||||| Sbjct: 238158 caccaccagcagatgaggatgatg 238135 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,450,279 Number of Sequences: 3902068 Number of extensions: 4450279 Number of successful extensions: 92279 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92065 Number of HSP's gapped (non-prelim): 214 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)