ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8f08 |
|---|---|
| Clone Library Name | barley_pub |
>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) Length = 364 Score = 369 bits (947), Expect(2) = e-104 Identities = 169/178 (94%), Positives = 174/178 (97%) Frame = +2 Query: 38 PXASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTP 217 P ASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDPSGKDINALEQHIKNLLSPSTP Sbjct: 81 PKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTP 140 Query: 218 FFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQMVKPRERNSRYV 397 FFFNTLYDPYREGADFVRGYPFSLREGA TAVSHGLWLNIPDYDAPTQ+VKP+ERN RYV Sbjct: 141 FFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQLVKPKERNERYV 200 Query: 398 DAVLTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICD 571 DAV+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICD Sbjct: 201 DAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICD 258 Score = 28.9 bits (63), Expect(2) = e-104 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +3 Query: 3 LYNRNDINRILG 38 LYNRNDINRILG Sbjct: 69 LYNRNDINRILG 80
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 366 bits (939), Expect(2) = e-103 Identities = 166/178 (93%), Positives = 174/178 (97%) Frame = +2 Query: 38 PXASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTP 217 P ASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDPSGKDINALEQHIKNLL PSTP Sbjct: 75 PKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTP 134 Query: 218 FFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQMVKPRERNSRYV 397 FFNTLYDPYREGADFVRGYPFS+REGA TAVSHGLWLNIPDYDAPTQ+VKPRERN+RYV Sbjct: 135 HFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPTQLVKPRERNTRYV 194 Query: 398 DAVLTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICD 571 DAV+TIPKGTLFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMWAGWC+KVICD Sbjct: 195 DAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICD 252 Score = 28.9 bits (63), Expect(2) = e-103 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +3 Query: 3 LYNRNDINRILG 38 LYNRNDINRILG Sbjct: 63 LYNRNDINRILG 74
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 364 bits (934), Expect(2) = e-102 Identities = 165/178 (92%), Positives = 172/178 (96%) Frame = +2 Query: 38 PXASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTP 217 P ASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDPSGKDINALEQHIKNLL PSTP Sbjct: 71 PKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTP 130 Query: 218 FFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQMVKPRERNSRYV 397 FFNTLYDPYR+GADFVRGYPFS+REGAPTAVSHGLWLNIPDYDAPTQ+VKP ERN+RYV Sbjct: 131 HFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLVKPHERNTRYV 190 Query: 398 DAVLTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICD 571 DAV+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICD Sbjct: 191 DAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICD 248 Score = 28.9 bits (63), Expect(2) = e-102 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +3 Query: 3 LYNRNDINRILG 38 LYNRNDINRILG Sbjct: 59 LYNRNDINRILG 70
>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) Length = 364 Score = 360 bits (924), Expect(2) = e-101 Identities = 162/178 (91%), Positives = 173/178 (97%) Frame = +2 Query: 38 PXASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTP 217 P ASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDP+G +INALEQHIKNLLSPSTP Sbjct: 74 PKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTP 133 Query: 218 FFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQMVKPRERNSRYV 397 FFFNTLYDPYREG DFVRGYPFSLREG PTAVSHGLWLNIPDYDAPTQ+VKP ERN+R+V Sbjct: 134 FFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPHERNTRFV 193 Query: 398 DAVLTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICD 571 DAVLTIPKG+LFPMCGMNLAF+R+LIGPAMYFGLMGDGQPIGRYDDMWAGWC+KVICD Sbjct: 194 DAVLTIPKGSLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICD 251 Score = 28.9 bits (63), Expect(2) = e-101 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +3 Query: 3 LYNRNDINRILG 38 LYNRNDINRILG Sbjct: 62 LYNRNDINRILG 73
>EFTU_CHLCV (Q822I4) Elongation factor Tu (EF-Tu)| Length = 393 Score = 32.3 bits (72), Expect = 0.98 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Frame = +2 Query: 395 VDAVLTIPKGTLFPMCGMNLAFDRQLIGP-----AMYFGLMGDGQPIG 523 V V+T+P+GT M G N+ F+ QLI P M F + G+ IG Sbjct: 337 VTGVVTLPEGTEMVMPGDNVEFEVQLISPVALEEGMRFAIREGGRTIG 384
>DDC_CAEEL (P34751) Probable aromatic-L-amino-acid decarboxylase (EC 4.1.1.28)| (AADC) (DOPA decarboxylase) (DDC) Length = 830 Score = 30.8 bits (68), Expect = 2.9 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%) Frame = +2 Query: 242 PYREGADFVRGYPFS---LREGAPTAVSHGLWLNIPDYDAPTQMVKPR----ERNSRYVD 400 P+ GA+F P S L E P HG WL++ A T ++ P R + D Sbjct: 506 PFFVGANFGTSGPCSFDHLHELGPVCREHGTWLHVDAAYAGTALICPEIRGLMRGIDWAD 565 Query: 401 AVLTIPKGTLFPMC 442 + T P + +C Sbjct: 566 SFCTTPSKLIIAVC 579
>HECD1_HUMAN (Q9ULT8) E3 ubiquitin-protein ligase HECTD1 (HECT domain-containing| protein 1) (E3 ligase for inhibin receptor) (EULIR) Length = 2612 Score = 30.8 bits (68), Expect = 2.9 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 11/126 (8%) Frame = +2 Query: 125 DDDCFV-AKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYRE-GADFVRGYP------ 280 D D + A D ++N ++ + LL+ ++ F + + E GAD RG Sbjct: 374 DTDALIDAIDTGAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNRGQRSSSLHY 433 Query: 281 ---FSLREGAPTAVSHGLWLNIPDYDAPTQMVKPRERNSRYVDAVLTIPKGTLFPMCGMN 451 F + A T + HG ++ D D T + K RER V A+L P MC +N Sbjct: 434 AACFGRPQVAKTLLRHGANPDLRDEDGKTPLDKARERGHSEVVAILQSPGDW---MCPVN 490 Query: 452 LAFDRQ 469 D++ Sbjct: 491 KGDDKK 496
>MPRI_HUMAN (P11717) Cation-independent mannose-6-phosphate receptor precursor| (CI Man-6-P receptor) (CI-MPR) (M6PR) (Insulin-like growth factor 2 receptor) (Insulin-like growth factor II receptor) (IGF-II receptor) (M6P/IGF2 receptor) (M6P/IGF2R) (300 kD Length = 2491 Score = 30.8 bits (68), Expect = 2.9 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 14/73 (19%) Frame = -3 Query: 442 THGEQCSLGNSQDGINIPAVPLTR--------------FDHLCGCIIVRDVQPKAMRDSS 305 T GE C++ +SQ G + PLT+ + ++CG + V QP DS Sbjct: 622 TEGENCTVFDSQAGFSFDLSPLTKKNGAYKVETKKYDFYINVCGPVSVSPCQP----DSG 677 Query: 304 GCTLPKAEGVSTN 266 C + K++ + N Sbjct: 678 ACQVAKSDEKTWN 690
>EFTU_CHLMU (Q9PK73) Elongation factor Tu (EF-Tu)| Length = 393 Score = 30.4 bits (67), Expect = 3.7 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = +2 Query: 395 VDAVLTIPKGTLFPMCGMNLAFDRQLIGP-----AMYFGLMGDGQPIG 523 V V+T+P+G M G N+ F+ QLI P M F + G+ IG Sbjct: 337 VTGVVTLPEGVEMVMPGDNVEFEVQLISPVALEEGMRFAIREGGRTIG 384
>DNRI_STRPE (P25047) Regulatory protein dnrI| Length = 272 Score = 30.4 bits (67), Expect = 3.7 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -1 Query: 435 GNNVPLGIVRTASTYLLFLSRGLTICVGAS*SG 337 G P + T TY+L + RG+T+ +GAS +G Sbjct: 51 GTQPPASALTTLQTYILQVRRGITVALGASHNG 83
>EFTU_CHLTR (P26622) Elongation factor Tu (EF-Tu)| Length = 393 Score = 30.0 bits (66), Expect = 4.9 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = +2 Query: 395 VDAVLTIPKGTLFPMCGMNLAFDRQLIGP-----AMYFGLMGDGQPIG 523 V V+T+P+G M G N+ F+ QLI P M F + G+ IG Sbjct: 337 VTGVVTLPEGIEMVMPGDNVEFEVQLISPVALEEGMRFAIREGGRTIG 384
>YW91_CAEEL (Q22712) Hypothetical protein T24A11.1 in chromosome III| Length = 938 Score = 30.0 bits (66), Expect = 4.9 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -3 Query: 367 DHLCGCIIVRDVQPKAMRDSSGCTLPKAEGVSTNKVRA 254 +H G + + PK R SGCT P STN V++ Sbjct: 603 EHYTGAVKPQIFSPKEERPLSGCTTPMNTSTSTNLVKS 640
>EFTU_CHLPN (Q9Z9A7) Elongation factor Tu (EF-Tu)| Length = 393 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = +2 Query: 395 VDAVLTIPKGTLFPMCGMNLAFDRQLIG-----PAMYFGLMGDGQPIG 523 V V+T+P+GT M G N+ D +LIG M F + G+ IG Sbjct: 337 VTGVVTLPEGTEMVMPGDNVELDVELIGTVALEEGMRFAIREGGRTIG 384
>EFTU2_STRRA (P29543) Elongation factor Tu-2 (EF-Tu-2)| Length = 397 Score = 29.3 bits (64), Expect = 8.3 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Frame = +2 Query: 395 VDAVLTIPKGTLFPMCGMNLAFDRQLIGP-----AMYFGLMGDGQPIG 523 V V+T+PKGT M G N A QLI P + F + G+ +G Sbjct: 341 VTGVVTLPKGTEMVMPGDNTAMHVQLIQPIAMEEGLKFAIREGGRTVG 388 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,890,029 Number of Sequences: 219361 Number of extensions: 1943557 Number of successful extensions: 5019 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4863 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5019 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
