ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7p23 |
|---|---|
| Clone Library Name | barley_pub |
>MRP1_ARATH (Q9C8G9) Multidrug resistance-associated protein 1 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 1) (ATP-energized glutathione S-conjugate pump 1) Length = 1622 Score = 150 bits (378), Expect = 3e-36 Identities = 77/162 (47%), Positives = 103/162 (63%), Gaps = 2/162 (1%) Frame = +1 Query: 4 ARGDGAFSXMVQSTGPSNAEYLKSLVLGNGEER-LRKEESKLQDIQRKWAASNRWXXXXX 180 + G+ +FS MVQSTG +NAEYL+S+ L N R ++S+ + QRKW AS+RW Sbjct: 1460 SNGESSFSKMVQSTGTANAEYLRSITLENKRTREANGDDSQPLEGQRKWQASSRWAAAAQ 1519 Query: 181 XXXXXXXXXXXXXXXXXEVAEGNSILRKTKDAVITLQSVLEGKHNTEIEESLTEYQVPPD 360 E+ + NSIL+KTKDAV+TL+SVLEGKH+ EIE+SL + + + Sbjct: 1520 FALAVSLTSSHNDLQSLEIEDDNSILKKTKDAVVTLRSVLEGKHDKEIEDSLNQSDISRE 1579 Query: 361 RWWSSLYKVIEGLATMSKLGRNRRQ-PGYSFENHGSIDWDQI 483 RWW SLYK++EGLA MS+L RNR Q P Y+ E S DWD + Sbjct: 1580 RWWPSLYKMVEGLAVMSRLARNRMQHPDYNLEGK-SFDWDNV 1620
>MRP2_ARATH (Q42093) Multidrug resistance-associated protein 2 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 2) (ATP-energized glutathione S-conjugate pump 2) Length = 1623 Score = 141 bits (356), Expect = 1e-33 Identities = 75/156 (48%), Positives = 102/156 (65%), Gaps = 1/156 (0%) Frame = +1 Query: 19 AFSXMVQSTGPSNAEYLKSLVLGNGEERLRKEESKLQDIQRKWAASNRWXXXXXXXXXXX 198 +FS MVQSTG +NAEYL+SLVL N +R + + LQ QRKW AS+RW Sbjct: 1470 SFSKMVQSTGAANAEYLRSLVLDN--KRAKDDSHHLQG-QRKWLASSRWAAAAQFALAAS 1526 Query: 199 XXXXXXXXXXXEVAEGNSILRKTKDAVITLQSVLEGKHNTEIEESLTEYQVPPDRWWSSL 378 E+ + +SIL++T DAV+TL+SVLEGKH+ EI ESL E+ + + W SSL Sbjct: 1527 LTSSHNDLQSLEIEDDSSILKRTNDAVVTLRSVLEGKHDKEIAESLEEHNISREGWLSSL 1586 Query: 379 YKVIEGLATMSKLGRNR-RQPGYSFENHGSIDWDQI 483 Y+++EGLA MS+L RNR +QP Y+FE + + DWD + Sbjct: 1587 YRMVEGLAVMSRLARNRMQQPDYNFEGN-TFDWDNV 1621
>MRP13_ARATH (Q9C8H0) Multidrug resistance-associated protein 13 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 13) (ATP-energized glutathione S-conjugate pump 13) Length = 1495 Score = 33.9 bits (76), Expect = 0.31 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +1 Query: 4 ARGDGAFSXMVQSTGPSNAEYLKSLVLGNGE 96 +R AF MV STGP+NA+YL +LV E Sbjct: 1458 SRDTSAFFRMVHSTGPANAQYLSNLVFERRE 1488
>MRP12_ARATH (Q9C8H1) Multidrug resistance-associated protein 12 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 12) (ATP-energized glutathione S-conjugate pump 12) Length = 1495 Score = 33.1 bits (74), Expect = 0.53 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Frame = +1 Query: 4 ARGDGAFSXMVQSTGPSNAEYLKSLVL---GNG 93 +R AF MV STGP N +YL +LV GNG Sbjct: 1458 SRDTSAFFKMVHSTGPENGQYLSNLVFERRGNG 1490
>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1813 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = -1 Query: 511 ALQCQCSTPKFDPSQ*TRGFQNCNQVADGCDPVCSSWRGLR*LCKVTTTTYQVEPDTQ 338 + C C T F PS + + ++ D DPVC +WR C+ + +Y+ D Q Sbjct: 1230 SFSCLCETASFQPSPDSGECLDIDECEDREDPVCGAWR-----CENSPGSYRCILDCQ 1282
>SYR1_BACHD (Q9K6C1) Arginyl-tRNA synthetase 1 (EC 6.1.1.19) (Arginine--tRNA| ligase 1) (ArgRS 1) Length = 556 Score = 30.8 bits (68), Expect = 2.6 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 8/76 (10%) Frame = +1 Query: 319 EIEESLTEYQVPPDRWWS--SLY---KVIEGLATMSKLGRNRRQPG---YSFENHGSIDW 474 +I+ L E++VP D W+S SLY KV + L + + G+ Q G + +G D Sbjct: 245 KIKSDLEEFRVPFDNWYSETSLYTTGKVEKTLNVLKEKGKTYEQDGALWFRSTEYGD-DK 303 Query: 475 DQI*VLNTGIAMLLNP 522 D++ V N G L P Sbjct: 304 DRVLVKNDGSYTYLTP 319
>VPS16_MOUSE (Q920Q4) Vacuolar protein sorting 16 (mVPS16)| Length = 839 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +1 Query: 283 TLQSVLEGKHNTEIEESLTEYQVPPDR-WWSSLYKV--IEGLATMSKLGRNRRQP-GY 444 T+ +++ G HN E+ ++++P R WW L + +E + K ++++ P GY Sbjct: 699 TVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGY 756
>VPS16_HUMAN (Q9H269) Vacuolar protein sorting 16 (hVPS16)| Length = 839 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +1 Query: 283 TLQSVLEGKHNTEIEESLTEYQVPPDR-WWSSLYKV--IEGLATMSKLGRNRRQP-GY 444 T+ +++ G HN E+ ++++P R WW L + +E + K ++++ P GY Sbjct: 699 TVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGY 756
>HCAD_ECOLI (P77650) 3-phenylpropionate dioxygenase ferredoxin--NAD(+)| reductase component (EC 1.18.1.3) (Digoxigenin system ferredoxin--NAD(+) reductase component) Length = 400 Score = 28.9 bits (63), Expect = 10.0 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +1 Query: 322 IEESLTEYQVPPDRWWSSLYKVIEGLATMSKLGRNRRQPGYSFENHGSIDWDQI*VLNTG 501 +E+S QV P WW + T+ LGR+ R+ N S WDQ+ + TG Sbjct: 53 LEDSPQLQQVLPANWWQENNVHLHSGVTIKTLGRDTRE--LVLTNGESWHWDQL-FIATG 109 Query: 502 IA 507 A Sbjct: 110 AA 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,747,740 Number of Sequences: 219361 Number of extensions: 1571359 Number of successful extensions: 3830 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3722 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3827 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
