| Clone Name | bags7p21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1425 Score = 422 bits (213), Expect = e-115 Identities = 424/493 (86%), Gaps = 6/493 (1%) Strand = Plus / Plus Query: 29 caagtgctatggcgacaggttcatcccggacaggtcggcgatggacatggacatggcgca 88 ||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 132 caagtgctacggtgacaggtttattccggacaggtcggcgatggacatggacatggcgca 191 Query: 89 ctacctcctgacggagccgaggaaggacagcaagaacgcggtgacgccgtcgccggccaa 148 |||||| |||||||||||||||||||||| ||||||||| || |||| |||||||| Sbjct: 192 ctacctgctgacggagccgaggaaggacaaggagaacgcgg---cggcgtccccggccaa 248 Query: 149 ggaggcgtaccggaagctgctggcggagaagctgctcaacaaccgcaccaggattctcgc 208 |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| | Sbjct: 249 ggaggcgtaccggaagctgctggccgagaagatcctcaacaaccgcaccaggattctctc 308 Query: 209 tttcaggaacaagccgccggagcctgagaacagcatgctcatggagctccatgctgatgc 268 ||| | ||||||||||| ||||| |||| |||| |||| |||||||| ||||||||| Sbjct: 309 cttccgcaacaagccgccagagcccgaga---gcatcctcacggagctccgtgctgatgc 365 Query: 269 ggcctccatccaggccagaccggtgaagaagcgtcgatacatccctcagtccgcagagag 328 ||| |||||||| |||| |||| |||| |||| |||||||| |||||||| || ||||| Sbjct: 366 ggcttccatccaagccaagccggcgaagcagcgccgatacattcctcagtctgccgagag 425 Query: 329 gactctggatgcgccagacatcgttgacgattactacctcaacctgctggactggggaag 388 |||||||||||| ||||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 426 gactctggatgctccagagcttgttgatgattactacctcaacctactggactggggaag 485 Query: 389 cgccaatgtgctgtccattgcactggggaacacggtatacctctgggacgctgcaagtgg 448 | ||||||||| |||||||| ||||| ||| |||| ||||||||||| || | | | Sbjct: 486 cagcaatgtgctatccattgcgctgggcaactcggtgtacctctgggatgccacgaacag 545 Query: 449 gtctacatccgagcttgttaccattggtgaggacgatggccctgtcactagtgttagctg 508 || || || |||||||||||| | | ||||||| ||||||||||||| || || ||||| Sbjct: 546 ttcaacttctgagcttgttaccgtcgatgaggacaatggccctgtcaccagcgtaagctg 605 Query: 509 ggctcctgatggc 521 ||||||||||||| Sbjct: 606 ggctcctgatggc 618
>dbj|AK103675.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136B14, full insert sequence Length = 2568 Score = 422 bits (213), Expect = e-115 Identities = 424/493 (86%), Gaps = 6/493 (1%) Strand = Plus / Plus Query: 29 caagtgctatggcgacaggttcatcccggacaggtcggcgatggacatggacatggcgca 88 ||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 691 caagtgctacggtgacaggtttattccggacaggtcggcgatggacatggacatggcgca 750 Query: 89 ctacctcctgacggagccgaggaaggacagcaagaacgcggtgacgccgtcgccggccaa 148 |||||| |||||||||||||||||||||| ||||||||| || |||| |||||||| Sbjct: 751 ctacctgctgacggagccgaggaaggacaaggagaacgcgg---cggcgtccccggccaa 807 Query: 149 ggaggcgtaccggaagctgctggcggagaagctgctcaacaaccgcaccaggattctcgc 208 |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| | Sbjct: 808 ggaggcgtaccggaagctgctggccgagaagatcctcaacaaccgcaccaggattctctc 867 Query: 209 tttcaggaacaagccgccggagcctgagaacagcatgctcatggagctccatgctgatgc 268 ||| | ||||||||||| ||||| |||| |||| |||| |||||||| ||||||||| Sbjct: 868 cttccgcaacaagccgccagagcccgaga---gcatcctcacggagctccgtgctgatgc 924 Query: 269 ggcctccatccaggccagaccggtgaagaagcgtcgatacatccctcagtccgcagagag 328 ||| |||||||| |||| |||| |||| |||| |||||||| |||||||| || ||||| Sbjct: 925 ggcttccatccaagccaagccggcgaagcagcgccgatacattcctcagtctgccgagag 984 Query: 329 gactctggatgcgccagacatcgttgacgattactacctcaacctgctggactggggaag 388 |||||||||||| ||||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 985 gactctggatgctccagagcttgttgatgattactacctcaacctactggactggggaag 1044 Query: 389 cgccaatgtgctgtccattgcactggggaacacggtatacctctgggacgctgcaagtgg 448 | ||||||||| |||||||| ||||| ||| |||| ||||||||||| || | | | Sbjct: 1045 cagcaatgtgctatccattgcgctgggcaactcggtgtacctctgggatgccacgaacag 1104 Query: 449 gtctacatccgagcttgttaccattggtgaggacgatggccctgtcactagtgttagctg 508 || || || |||||||||||| | | ||||||| ||||||||||||| || || ||||| Sbjct: 1105 ttcaacttctgagcttgttaccgtcgatgaggacaatggccctgtcaccagcgtaagctg 1164 Query: 509 ggctcctgatggc 521 ||||||||||||| Sbjct: 1165 ggctcctgatggc 1177
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 270 bits (136), Expect = 4e-69 Identities = 242/276 (87%), Gaps = 6/276 (2%) Strand = Plus / Plus Query: 42 gacaggttcatcccggacaggtcggcgatggacatggacatggcgcactacctcctgacg 101 |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 30302623 gacaggtttattccggacaggtcggcgatggacatggacatggcgcactacctgctgacg 30302682 Query: 102 gagccgaggaaggacagcaagaacgcggtgacgccgtcgccggccaaggaggcgtaccgg 161 |||||||||||||||| ||||||||| || |||| ||||||||||||||||||||| Sbjct: 30302683 gagccgaggaaggacaaggagaacgcgg---cggcgtccccggccaaggaggcgtaccgg 30302739 Query: 162 aagctgctggcggagaagctgctcaacaaccgcaccaggattctcgctttcaggaacaag 221 ||||||||||| |||||| | |||||||||||||||||||||||| | ||| | |||||| Sbjct: 30302740 aagctgctggccgagaagatcctcaacaaccgcaccaggattctctccttccgcaacaag 30302799 Query: 222 ccgccggagcctgagaacagcatgctcatggagctccatgctgatgcggcctccatccag 281 ||||| ||||| ||| ||||| |||| |||||||| |||||||||||| |||||||| Sbjct: 30302800 ccgccagagcccgag---agcatcctcacggagctccgtgctgatgcggcttccatccaa 30302856 Query: 282 gccagaccggtgaagaagcgtcgatacatccctcag 317 |||| |||| |||| |||| |||||||| |||||| Sbjct: 30302857 gccaagccggcgaagcagcgccgatacattcctcag 30302892 Score = 149 bits (75), Expect = 1e-32 Identities = 174/207 (84%) Strand = Plus / Plus Query: 315 cagtccgcagagaggactctggatgcgccagacatcgttgacgattactacctcaacctg 374 ||||| || ||||||||||||||||| ||||| | ||||| ||||||||||||||||| Sbjct: 30303016 cagtctgccgagaggactctggatgctccagagcttgttgatgattactacctcaaccta 30303075 Query: 375 ctggactggggaagcgccaatgtgctgtccattgcactggggaacacggtatacctctgg 434 ||||||||||||||| ||||||||| |||||||| ||||| ||| |||| ||||||||| Sbjct: 30303076 ctggactggggaagcagcaatgtgctatccattgcgctgggcaactcggtgtacctctgg 30303135 Query: 435 gacgctgcaagtgggtctacatccgagcttgttaccattggtgaggacgatggccctgtc 494 || || | | | || || || |||||||||||| | | ||||||| ||||||||||| Sbjct: 30303136 gatgccacgaacagttcaacttctgagcttgttaccgtcgatgaggacaatggccctgtc 30303195 Query: 495 actagtgttagctgggctcctgatggc 521 || || || |||||||||||||||||| Sbjct: 30303196 accagcgtaagctgggctcctgatggc 30303222
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 270 bits (136), Expect = 4e-69 Identities = 242/276 (87%), Gaps = 6/276 (2%) Strand = Plus / Plus Query: 42 gacaggttcatcccggacaggtcggcgatggacatggacatggcgcactacctcctgacg 101 |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 52519 gacaggtttattccggacaggtcggcgatggacatggacatggcgcactacctgctgacg 52578 Query: 102 gagccgaggaaggacagcaagaacgcggtgacgccgtcgccggccaaggaggcgtaccgg 161 |||||||||||||||| ||||||||| || |||| ||||||||||||||||||||| Sbjct: 52579 gagccgaggaaggacaaggagaacgcgg---cggcgtccccggccaaggaggcgtaccgg 52635 Query: 162 aagctgctggcggagaagctgctcaacaaccgcaccaggattctcgctttcaggaacaag 221 ||||||||||| |||||| | |||||||||||||||||||||||| | ||| | |||||| Sbjct: 52636 aagctgctggccgagaagatcctcaacaaccgcaccaggattctctccttccgcaacaag 52695 Query: 222 ccgccggagcctgagaacagcatgctcatggagctccatgctgatgcggcctccatccag 281 ||||| ||||| ||| ||||| |||| |||||||| |||||||||||| |||||||| Sbjct: 52696 ccgccagagcccgag---agcatcctcacggagctccgtgctgatgcggcttccatccaa 52752 Query: 282 gccagaccggtgaagaagcgtcgatacatccctcag 317 |||| |||| |||| |||| |||||||| |||||| Sbjct: 52753 gccaagccggcgaagcagcgccgatacattcctcag 52788 Score = 149 bits (75), Expect = 1e-32 Identities = 174/207 (84%) Strand = Plus / Plus Query: 315 cagtccgcagagaggactctggatgcgccagacatcgttgacgattactacctcaacctg 374 ||||| || ||||||||||||||||| ||||| | ||||| ||||||||||||||||| Sbjct: 52912 cagtctgccgagaggactctggatgctccagagcttgttgatgattactacctcaaccta 52971 Query: 375 ctggactggggaagcgccaatgtgctgtccattgcactggggaacacggtatacctctgg 434 ||||||||||||||| ||||||||| |||||||| ||||| ||| |||| ||||||||| Sbjct: 52972 ctggactggggaagcagcaatgtgctatccattgcgctgggcaactcggtgtacctctgg 53031 Query: 435 gacgctgcaagtgggtctacatccgagcttgttaccattggtgaggacgatggccctgtc 494 || || | | | || || || |||||||||||| | | ||||||| ||||||||||| Sbjct: 53032 gatgccacgaacagttcaacttctgagcttgttaccgtcgatgaggacaatggccctgtc 53091 Query: 495 actagtgttagctgggctcctgatggc 521 || || || |||||||||||||||||| Sbjct: 53092 accagcgtaagctgggctcctgatggc 53118
>ref|XM_467317.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2262 Score = 184 bits (93), Expect = 2e-43 Identities = 182/211 (86%), Gaps = 3/211 (1%) Strand = Plus / Plus Query: 29 caagtgctatggcgacaggttcatcccggacaggtcggcgatggacatggacatggcgca 88 ||||||||| || || |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 443 caagtgctacggggataggttcataccggacaggtcggcgatggacatggacatggcgca 502 Query: 89 ctacctcctgacggagccgaggaaggacagcaagaacgcggtgacgccgtcgccggccaa 148 |||||| || |||||||| | |||||||| ||||||||| || |||| ||| |||| Sbjct: 503 ctacctgctcacggagcccaagaaggacaaggagaacgcgg---cggcgtccccgtccaa 559 Query: 149 ggaggcgtaccggaagctgctggcggagaagctgctcaacaaccgcaccaggattctcgc 208 ||||| |||||||| |||||| || |||||||||||||||||||| || |||| ||||| Sbjct: 560 ggaggtgtaccggaggctgctcgccgagaagctgctcaacaaccggacacggatcctcgc 619 Query: 209 tttcaggaacaagccgccggagcctgagaac 239 ||| |||||||||| |||||||| |||||| Sbjct: 620 cttccggaacaagccaccggagcccgagaac 650 Score = 123 bits (62), Expect = 6e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 306 tacatccctcagtccgcagagaggactctggatgcgccagacatcgttgacgattactac 365 ||||| || ||||| || ||||||||||||||||| || ||| |||| ||||||||||| Sbjct: 708 tacattccccagtctgccgagaggactctggatgcaccggacctcgtcgacgattactat 767 Query: 366 ctcaacctgctggactggggaagcgccaatgtgctgtccattgcactggggaacacggta 425 |||||||||||||||||||||||| || |||||||||||||| ||||| ||||||| Sbjct: 768 ctcaacctgctggactggggaagcaagaacgtgctgtccattgcgctgggcgacacggtg 827 Query: 426 tacctctgggacgc 439 ||||| |||||||| Sbjct: 828 tacctgtgggacgc 841
>dbj|AK102954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115E13, full insert sequence Length = 2262 Score = 184 bits (93), Expect = 2e-43 Identities = 182/211 (86%), Gaps = 3/211 (1%) Strand = Plus / Plus Query: 29 caagtgctatggcgacaggttcatcccggacaggtcggcgatggacatggacatggcgca 88 ||||||||| || || |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 443 caagtgctacggggataggttcataccggacaggtcggcgatggacatggacatggcgca 502 Query: 89 ctacctcctgacggagccgaggaaggacagcaagaacgcggtgacgccgtcgccggccaa 148 |||||| || |||||||| | |||||||| ||||||||| || |||| ||| |||| Sbjct: 503 ctacctgctcacggagcccaagaaggacaaggagaacgcgg---cggcgtccccgtccaa 559 Query: 149 ggaggcgtaccggaagctgctggcggagaagctgctcaacaaccgcaccaggattctcgc 208 ||||| |||||||| |||||| || |||||||||||||||||||| || |||| ||||| Sbjct: 560 ggaggtgtaccggaggctgctcgccgagaagctgctcaacaaccggacacggatcctcgc 619 Query: 209 tttcaggaacaagccgccggagcctgagaac 239 ||| |||||||||| |||||||| |||||| Sbjct: 620 cttccggaacaagccaccggagcccgagaac 650 Score = 123 bits (62), Expect = 6e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 306 tacatccctcagtccgcagagaggactctggatgcgccagacatcgttgacgattactac 365 ||||| || ||||| || ||||||||||||||||| || ||| |||| ||||||||||| Sbjct: 708 tacattccccagtctgccgagaggactctggatgcaccggacctcgtcgacgattactat 767 Query: 366 ctcaacctgctggactggggaagcgccaatgtgctgtccattgcactggggaacacggta 425 |||||||||||||||||||||||| || |||||||||||||| ||||| ||||||| Sbjct: 768 ctcaacctgctggactggggaagcaagaacgtgctgtccattgcgctgggcgacacggtg 827 Query: 426 tacctctgggacgc 439 ||||| |||||||| Sbjct: 828 tacctgtgggacgc 841
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 176 bits (89), Expect = 5e-41 Identities = 169/195 (86%), Gaps = 3/195 (1%) Strand = Plus / Plus Query: 45 aggttcatcccggacaggtcggcgatggacatggacatggcgcactacctcctgacggag 104 |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 28821950 aggttcataccggacaggtcggcgatggacatggacatggcgcactacctgctcacggag 28822009 Query: 105 ccgaggaaggacagcaagaacgcggtgacgccgtcgccggccaaggaggcgtaccggaag 164 || | |||||||| ||||||||| || |||| ||| ||||||||| |||||||| | Sbjct: 28822010 cccaagaaggacaaggagaacgcgg---cggcgtccccgtccaaggaggtgtaccggagg 28822066 Query: 165 ctgctggcggagaagctgctcaacaaccgcaccaggattctcgctttcaggaacaagccg 224 ||||| || |||||||||||||||||||| || |||| ||||| ||| |||||||||| Sbjct: 28822067 ctgctcgccgagaagctgctcaacaaccggacacggatcctcgccttccggaacaagcca 28822126 Query: 225 ccggagcctgagaac 239 |||||||| |||||| Sbjct: 28822127 ccggagcccgagaac 28822141 Score = 119 bits (60), Expect = 1e-23 Identities = 102/116 (87%) Strand = Plus / Plus Query: 324 gagaggactctggatgcgccagacatcgttgacgattactacctcaacctgctggactgg 383 ||||||||||||||||| || ||| |||| ||||||||||| |||||||||||||||||| Sbjct: 28822305 gagaggactctggatgcaccggacctcgtcgacgattactatctcaacctgctggactgg 28822364 Query: 384 ggaagcgccaatgtgctgtccattgcactggggaacacggtatacctctgggacgc 439 |||||| || |||||||||||||| ||||| ||||||| ||||| |||||||| Sbjct: 28822365 ggaagcaagaacgtgctgtccattgcgctgggcgacacggtgtacctgtgggacgc 28822420
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 176 bits (89), Expect = 5e-41 Identities = 169/195 (86%), Gaps = 3/195 (1%) Strand = Plus / Plus Query: 45 aggttcatcccggacaggtcggcgatggacatggacatggcgcactacctcctgacggag 104 |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 138523 aggttcataccggacaggtcggcgatggacatggacatggcgcactacctgctcacggag 138582 Query: 105 ccgaggaaggacagcaagaacgcggtgacgccgtcgccggccaaggaggcgtaccggaag 164 || | |||||||| ||||||||| || |||| ||| ||||||||| |||||||| | Sbjct: 138583 cccaagaaggacaaggagaacgcgg---cggcgtccccgtccaaggaggtgtaccggagg 138639 Query: 165 ctgctggcggagaagctgctcaacaaccgcaccaggattctcgctttcaggaacaagccg 224 ||||| || |||||||||||||||||||| || |||| ||||| ||| |||||||||| Sbjct: 138640 ctgctcgccgagaagctgctcaacaaccggacacggatcctcgccttccggaacaagcca 138699 Query: 225 ccggagcctgagaac 239 |||||||| |||||| Sbjct: 138700 ccggagcccgagaac 138714 Score = 119 bits (60), Expect = 1e-23 Identities = 102/116 (87%) Strand = Plus / Plus Query: 324 gagaggactctggatgcgccagacatcgttgacgattactacctcaacctgctggactgg 383 ||||||||||||||||| || ||| |||| ||||||||||| |||||||||||||||||| Sbjct: 138878 gagaggactctggatgcaccggacctcgtcgacgattactatctcaacctgctggactgg 138937 Query: 384 ggaagcgccaatgtgctgtccattgcactggggaacacggtatacctctgggacgc 439 |||||| || |||||||||||||| ||||| ||||||| ||||| |||||||| Sbjct: 138938 ggaagcaagaacgtgctgtccattgcgctgggcgacacggtgtacctgtgggacgc 138993
>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_E07 Length = 123613 Score = 176 bits (89), Expect = 5e-41 Identities = 169/195 (86%), Gaps = 3/195 (1%) Strand = Plus / Plus Query: 45 aggttcatcccggacaggtcggcgatggacatggacatggcgcactacctcctgacggag 104 |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 14642 aggttcataccggacaggtcggcgatggacatggacatggcgcactacctgctcacggag 14701 Query: 105 ccgaggaaggacagcaagaacgcggtgacgccgtcgccggccaaggaggcgtaccggaag 164 || | |||||||| ||||||||| || |||| ||| ||||||||| |||||||| | Sbjct: 14702 cccaagaaggacaaggagaacgcgg---cggcgtccccgtccaaggaggtgtaccggagg 14758 Query: 165 ctgctggcggagaagctgctcaacaaccgcaccaggattctcgctttcaggaacaagccg 224 ||||| || |||||||||||||||||||| || |||| ||||| ||| |||||||||| Sbjct: 14759 ctgctcgccgagaagctgctcaacaaccggacacggatcctcgccttccggaacaagcca 14818 Query: 225 ccggagcctgagaac 239 |||||||| |||||| Sbjct: 14819 ccggagcccgagaac 14833 Score = 119 bits (60), Expect = 1e-23 Identities = 102/116 (87%) Strand = Plus / Plus Query: 324 gagaggactctggatgcgccagacatcgttgacgattactacctcaacctgctggactgg 383 ||||||||||||||||| || ||| |||| ||||||||||| |||||||||||||||||| Sbjct: 14997 gagaggactctggatgcaccggacctcgtcgacgattactatctcaacctgctggactgg 15056 Query: 384 ggaagcgccaatgtgctgtccattgcactggggaacacggtatacctctgggacgc 439 |||||| || |||||||||||||| ||||| ||||||| ||||| |||||||| Sbjct: 15057 ggaagcaagaacgtgctgtccattgcgctgggcgacacggtgtacctgtgggacgc 15112
>gb|BT018609.1| Zea mays clone EL01N0450G05.d mRNA sequence Length = 1595 Score = 101 bits (51), Expect = 2e-18 Identities = 132/159 (83%) Strand = Plus / Plus Query: 315 cagtccgcagagaggactctggatgcgccagacatcgttgacgattactacctcaacctg 374 ||||| |||||||||| |||||| || ||||| | |||||||| ||||||||||||||| Sbjct: 73 cagtctgcagagaggattctggacgcaccagagcttgttgacgactactacctcaacctg 132 Query: 375 ctggactggggaagcgccaatgtgctgtccattgcactggggaacacggtatacctctgg 434 || |||||||| ||| ||| ||||| |||||||| ||||| ||||||||||||| ||| Sbjct: 133 cttgactgggggagcaacaacgtgctatccattgctctgggcgacacggtatacctgtgg 192 Query: 435 gacgctgcaagtgggtctacatccgagcttgttaccatt 473 || || | ||||| || || || |||||||| |||||| Sbjct: 193 gatgcctccagtggatccacgtctgagcttgtgaccatt 231
>ref|NM_119481.2| Arabidopsis thaliana CDC20.1; signal transducer AT4G33270 (CDC20.1) mRNA, complete cds Length = 1769 Score = 89.7 bits (45), Expect = 9e-15 Identities = 177/221 (80%) Strand = Plus / Plus Query: 300 cgtcgatacatccctcagtccgcagagaggactctggatgcgccagacatcgttgacgat 359 ||||||||||| |||||| | | |||||||| ||||||| || ||||| ||||||||| Sbjct: 563 cgtcgatacattcctcagacttctgagaggaccttggatgcacctgacattgttgacgat 622 Query: 360 tactacctcaacctgctggactggggaagcgccaatgtgctgtccattgcactggggaac 419 | |||||||||| |||||||||||||||| || ||||| | |||| || ||| || Sbjct: 623 ttctacctcaacttgctggactggggaagtgcaaatgtcttagccatagcgttggaccac 682 Query: 420 acggtatacctctgggacgctgcaagtgggtctacatccgagcttgttaccattggtgag 479 || || ||| | ||||| ||| | | ||| |||||||| |||||||| ||||||| |||| Sbjct: 683 actgtctacttgtgggatgcttccactggttctacatctgagcttgtgaccattgatgag 742 Query: 480 gacgatggccctgtcactagtgttagctgggctcctgatgg 520 || | || |||||||| ||| | | ||||||||||||||| Sbjct: 743 gagaagggacctgtcacaagtatcaactgggctcctgatgg 783
>emb|AJ224078.1|BNAJ4078 Brassica napus mRNA with similarity to p55cdc and fizzy genes Length = 1721 Score = 89.7 bits (45), Expect = 9e-15 Identities = 174/217 (80%) Strand = Plus / Plus Query: 304 gatacatccctcagtccgcagagaggactctggatgcgccagacatcgttgacgattact 363 ||||||| |||||| || | |||||||| ||||||| || |||||||||||||| | || Sbjct: 517 gatacattcctcagacctctgagaggacattggatgcacctgacatcgttgacgacttct 576 Query: 364 acctcaacctgctggactggggaagcgccaatgtgctgtccattgcactggggaacacgg 423 ||||||||||||| |||||||| || || ||||| || ||||||| |||| |||| | Sbjct: 577 acctcaacctgcttgactggggcagtgctaatgtcctagccattgcgttgggacacactg 636 Query: 424 tatacctctgggacgctgcaagtgggtctacatccgagcttgttaccattggtgaggacg 483 | || || ||||| ||| | || ||||| || || |||||||| ||||||| |||||| Sbjct: 637 tttatctgtgggatgcttccagcgggtccacttctgagcttgtcaccattgatgaggaga 696 Query: 484 atggccctgtcactagtgttagctgggctcctgatgg 520 | || |||||||| ||| | | |||||| |||||||| Sbjct: 697 aaggacctgtcacgagtatcaactgggcacctgatgg 733
>emb|BX827882.1|CNS0A3XV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1717 Score = 89.7 bits (45), Expect = 9e-15 Identities = 177/221 (80%) Strand = Plus / Plus Query: 300 cgtcgatacatccctcagtccgcagagaggactctggatgcgccagacatcgttgacgat 359 ||||||||||| |||||| | | |||||||| ||||||| || ||||| ||||||||| Sbjct: 551 cgtcgatacattcctcagacttctgagaggaccttggatgcacctgacattgttgacgat 610 Query: 360 tactacctcaacctgctggactggggaagcgccaatgtgctgtccattgcactggggaac 419 | |||||||||| |||||||||||||||| || ||||| | |||| || ||| || Sbjct: 611 ttctacctcaacttgctggactggggaagtgcaaatgtcttagccatagcgttggaccac 670 Query: 420 acggtatacctctgggacgctgcaagtgggtctacatccgagcttgttaccattggtgag 479 || || ||| | ||||| ||| | | ||| |||||||| |||||||| ||||||| |||| Sbjct: 671 actgtctacttgtgggatgcttccactggttctacatctgagcttgtgaccattgatgag 730 Query: 480 gacgatggccctgtcactagtgttagctgggctcctgatgg 520 || | || |||||||| ||| | | ||||||||||||||| Sbjct: 731 gagaagggacctgtcacaagtatcaactgggctcctgatgg 771
>gb|AF029262.1|AF029262 Arabidopsis thaliana putative cdc20 protein (CDC20.1) mRNA, complete cds Length = 1848 Score = 89.7 bits (45), Expect = 9e-15 Identities = 177/221 (80%) Strand = Plus / Plus Query: 300 cgtcgatacatccctcagtccgcagagaggactctggatgcgccagacatcgttgacgat 359 ||||||||||| |||||| | | |||||||| ||||||| || ||||| ||||||||| Sbjct: 611 cgtcgatacattcctcagacttctgagaggaccttggatgcacctgacattgttgacgat 670 Query: 360 tactacctcaacctgctggactggggaagcgccaatgtgctgtccattgcactggggaac 419 | |||||||||| |||||||||||||||| || ||||| | |||| || ||| || Sbjct: 671 ttctacctcaacttgctggactggggaagtgcaaatgtcttagccatagcgttggaccac 730 Query: 420 acggtatacctctgggacgctgcaagtgggtctacatccgagcttgttaccattggtgag 479 || || ||| | ||||| ||| | | ||| |||||||| |||||||| ||||||| |||| Sbjct: 731 actgtctacttgtgggatgcttccactggttctacatctgagcttgtgaccattgatgag 790 Query: 480 gacgatggccctgtcactagtgttagctgggctcctgatgg 520 || | || |||||||| ||| | | ||||||||||||||| Sbjct: 791 gagaagggacctgtcacaagtatcaactgggctcctgatgg 831
>ref|NM_119480.2| Arabidopsis thaliana CDC20.2; signal transducer AT4G33260 (CDC20.2) mRNA, complete cds Length = 1737 Score = 81.8 bits (41), Expect = 2e-12 Identities = 176/221 (79%) Strand = Plus / Plus Query: 300 cgtcgatacatccctcagtccgcagagaggactctggatgcgccagacatcgttgacgat 359 ||||||||||| |||||| | | ||||| || ||||||| || ||||| ||||||||| Sbjct: 562 cgtcgatacattcctcagacttctgagagaaccttggatgcacctgacattgttgacgat 621 Query: 360 tactacctcaacctgctggactggggaagcgccaatgtgctgtccattgcactggggaac 419 | |||||||||| |||||||||||||||| || ||||| | |||| || ||| || Sbjct: 622 ttctacctcaacttgctggactggggaagtgcaaatgtcttagccatagcgttggaccac 681 Query: 420 acggtatacctctgggacgctgcaagtgggtctacatccgagcttgttaccattggtgag 479 || || ||| | ||||| ||| | | ||| |||||||| |||||||| ||||||| |||| Sbjct: 682 actgtctacttgtgggatgcttccactggttctacatctgagcttgtgaccattgatgag 741 Query: 480 gacgatggccctgtcactagtgttagctgggctcctgatgg 520 || | || |||||||| ||| | | ||||||||||||||| Sbjct: 742 gagaagggacctgtcacaagtatcaactgggctcctgatgg 782
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79 Length = 199536 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Minus Query: 324 gagaggactctggatgcgccagacatcgttgacgattactacctcaacctgctggactgg 383 |||||||| ||||||| || ||||| |||||||||| |||||||||| ||||||||||| Sbjct: 73809 gagaggaccttggatgcacctgacattgttgacgatttctacctcaacttgctggactgg 73750 Query: 384 ggaagcgccaatgtgctgtccattgcactggggaacacggtatacctctgggacgctgca 443 ||||| || ||||| | |||| || ||| |||| || ||| | ||||| ||| | Sbjct: 73749 ggaagtgcaaatgtcttagccatagcgttggaccacactgtctacttgtgggatgcttcc 73690 Query: 444 agtgggtctacatccgagcttgttaccattggtgaggacgatggccctgtcactagtgtt 503 | ||| |||||||| |||||||| ||||||| |||||| | || |||||||| ||| | Sbjct: 73689 actggttctacatctgagcttgtgaccattgatgaggagaagggacctgtcacaagtatc 73630 Query: 504 agctgggctcctgatgg 520 | ||||||||||||||| Sbjct: 73629 aactgggctcctgatgg 73613 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Minus Query: 334 tggatgcgccagacatcgttgacgattactacctcaacctgctggactggggaagcgcca 393 ||||||| || ||||| |||||||||| |||||||||| |||||||||||||||| || | Sbjct: 70475 tggatgcacctgacattgttgacgatttctacctcaacttgctggactggggaagtgcaa 70416 Query: 394 atgtgctgtccattgcactggggaacacggtatacctctgggacgctgcaagtgggtcta 453 |||| | |||| || ||| |||| || ||| | ||||| ||| | | ||| |||| Sbjct: 70415 atgtcttagccatagcgttggaccacactgtctacttgtgggatgcttccactggttcta 70356 Query: 454 catccgagcttgttaccattggtgaggacgatggccctgtcactagtgttagctgggctc 513 |||| |||||||| ||||||| |||||| | || |||||||| ||| | | |||||||| Sbjct: 70355 catctgagcttgtgaccattgatgaggagaagggacctgtcacaagtatcaactgggctc 70296 Query: 514 ctgatgg 520 ||||||| Sbjct: 70295 ctgatgg 70289
>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project) Length = 96475 Score = 81.8 bits (41), Expect = 2e-12 Identities = 158/197 (80%) Strand = Plus / Minus Query: 324 gagaggactctggatgcgccagacatcgttgacgattactacctcaacctgctggactgg 383 |||||||| ||||||| || ||||| |||||||||| |||||||||| ||||||||||| Sbjct: 9030 gagaggaccttggatgcacctgacattgttgacgatttctacctcaacttgctggactgg 8971 Query: 384 ggaagcgccaatgtgctgtccattgcactggggaacacggtatacctctgggacgctgca 443 ||||| || ||||| | |||| || ||| |||| || ||| | ||||| ||| | Sbjct: 8970 ggaagtgcaaatgtcttagccatagcgttggaccacactgtctacttgtgggatgcttcc 8911 Query: 444 agtgggtctacatccgagcttgttaccattggtgaggacgatggccctgtcactagtgtt 503 | ||| |||||||| |||||||| ||||||| |||||| | || |||||||| ||| | Sbjct: 8910 actggttctacatctgagcttgtgaccattgatgaggagaagggacctgtcacaagtatc 8851 Query: 504 agctgggctcctgatgg 520 | ||||||||||||||| Sbjct: 8850 aactgggctcctgatgg 8834 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Minus Query: 334 tggatgcgccagacatcgttgacgattactacctcaacctgctggactggggaagcgcca 393 ||||||| || ||||| |||||||||| |||||||||| |||||||||||||||| || | Sbjct: 5696 tggatgcacctgacattgttgacgatttctacctcaacttgctggactggggaagtgcaa 5637 Query: 394 atgtgctgtccattgcactggggaacacggtatacctctgggacgctgcaagtgggtcta 453 |||| | |||| || ||| |||| || ||| | ||||| ||| | | ||| |||| Sbjct: 5636 atgtcttagccatagcgttggaccacactgtctacttgtgggatgcttccactggttcta 5577 Query: 454 catccgagcttgttaccattggtgaggacgatggccctgtcactagtgttagctgggctc 513 |||| |||||||| ||||||| |||||| | || |||||||| ||| | | |||||||| Sbjct: 5576 catctgagcttgtgaccattgatgaggagaagggacctgtcacaagtatcaactgggctc 5517 Query: 514 ctgatgg 520 ||||||| Sbjct: 5516 ctgatgg 5510
>gb|AF029263.1|AF029263 Arabidopsis thaliana putative cdc20 protein (CDC20.2) mRNA, complete cds Length = 1790 Score = 81.8 bits (41), Expect = 2e-12 Identities = 176/221 (79%) Strand = Plus / Plus Query: 300 cgtcgatacatccctcagtccgcagagaggactctggatgcgccagacatcgttgacgat 359 ||||||||||| |||||| | | ||||| || ||||||| || ||||| ||||||||| Sbjct: 610 cgtcgatacattcctcagacttctgagagaaccttggatgcacctgacattgttgacgat 669 Query: 360 tactacctcaacctgctggactggggaagcgccaatgtgctgtccattgcactggggaac 419 | |||||||||| |||||||||||||||| || ||||| | |||| || ||| || Sbjct: 670 ttctacctcaacttgctggactggggaagtgcaaatgtcttagccatagcgttggaccac 729 Query: 420 acggtatacctctgggacgctgcaagtgggtctacatccgagcttgttaccattggtgag 479 || || ||| | ||||| ||| | | ||| |||||||| |||||||| ||||||| |||| Sbjct: 730 actgtctacttgtgggatgcttccactggttctacatctgagcttgtgaccattgatgag 789 Query: 480 gacgatggccctgtcactagtgttagctgggctcctgatgg 520 || | || |||||||| ||| | | ||||||||||||||| Sbjct: 790 gagaagggacctgtcacaagtatcaactgggctcctgatgg 830
>dbj|AP007293.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34C12, TM0361, complete sequence Length = 108947 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 495 actagtgttagctgggctcctgatggc 521 |||||||||| |||||||||||||||| Sbjct: 71476 actagtgttaactgggctcctgatggc 71502
>ref|XM_501395.1| Yarrowia lipolytica CLIB122, YALI0C03377g predicted mRNA Length = 1653 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 354 gacgattactacctcaacctgctggactgg 383 |||||||| ||||||||||| ||||||||| Sbjct: 727 gacgattattacctcaacctcctggactgg 756
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 165 ctgctggcggagaagctgctca 186 |||||||||||||||||||||| Sbjct: 2015082 ctgctggcggagaagctgctca 2015061
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 354 gacgattactacctcaacctgctggactgg 383 |||||||| ||||||||||| ||||||||| Sbjct: 443441 gacgattattacctcaacctcctggactgg 443412
>gb|AE007285.1| Sinorhizobium meliloti 1021 plasmid pSymA section 91 of 121 of the complete plasmid sequence Length = 10931 Score = 42.1 bits (21), Expect = 1.8 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 59 caggtcggcgatggacatggacatggcgcacta 91 |||||||||||||| ||| |||||||||||||| Sbjct: 10728 caggtcggcgatggccat-gacatggcgcacta 10697
>ref|NM_145309.1| Homo sapiens leucine rich repeat containing 51 (LRRC51), mRNA Length = 2130 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 acggagccgaggaaggacagc 119 ||||||||||||||||||||| Sbjct: 556 acggagccgaggaaggacagc 536
>emb|CR702456.2|CNS0G4YS Tetraodon nigroviridis full-length cDNA Length = 1311 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 gacatggcgcactacctcctg 98 ||||||||||||||||||||| Sbjct: 318 gacatggcgcactacctcctg 338
>emb|CR699920.2|CNS0G30C Tetraodon nigroviridis full-length cDNA Length = 1328 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 gacatggcgcactacctcctg 98 ||||||||||||||||||||| Sbjct: 318 gacatggcgcactacctcctg 338
>gb|BC012855.1| Homo sapiens leucine rich repeat containing 51, mRNA (cDNA clone MGC:9830 IMAGE:3863323), complete cds Length = 2130 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 acggagccgaggaaggacagc 119 ||||||||||||||||||||| Sbjct: 556 acggagccgaggaaggacagc 536
>gb|AF289588.1|AF289588 Homo sapiens clone pp7517 unknown mRNA Length = 2712 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 acggagccgaggaaggacagc 119 ||||||||||||||||||||| Sbjct: 66 acggagccgaggaaggacagc 46
>emb|BX005368.11| Zebrafish DNA sequence from clone CH211-64C10 in linkage group 6, complete sequence Length = 187621 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gatggacatggacatggcgca 88 ||||||||||||||||||||| Sbjct: 114528 gatggacatggacatggcgca 114508
>gb|AC007749.3| Homo sapiens BAC clone RP11-574O16 from 2, complete sequence Length = 193644 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 ccaatgtgctgtccattgcac 411 ||||||||||||||||||||| Sbjct: 125173 ccaatgtgctgtccattgcac 125153
>emb|BX088591.11| Zebrafish DNA sequence from clone CH211-205N20, complete sequence Length = 181336 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gatggacatggacatggcgca 88 ||||||||||||||||||||| Sbjct: 18049 gatggacatggacatggcgca 18069
>gb|AF160760.1|F15P11 Arabidopsis thaliana BAC F15P11 Length = 23143 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 192 cgcaccaggattctcgctttcaggaacaa 220 |||||| |||||||||||||||| ||||| Sbjct: 10512 cgcacccggattctcgctttcagaaacaa 10484
>dbj|AP002490.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-849H4, complete sequence Length = 191986 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 acggagccgaggaaggacagc 119 ||||||||||||||||||||| Sbjct: 184279 acggagccgaggaaggacagc 184259
>dbj|AP000812.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-807H22, complete sequence Length = 120528 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 acggagccgaggaaggacagc 119 ||||||||||||||||||||| Sbjct: 1935 acggagccgaggaaggacagc 1915
>gb|AC171105.1| Drosophila melanogaster clone CH223-40I08, complete sequence Length = 53089 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 atggacatggacatggcgca 88 |||||||||||||||||||| Sbjct: 10648 atggacatggacatggcgca 10667
>gb|AC172160.3| Pan troglodytes chromosome X clone PTB-96F20 map human otholog p11.4, complete sequence Length = 203345 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gccgtcgccggccaaggagg 153 |||||||||||||||||||| Sbjct: 8860 gccgtcgccggccaaggagg 8879
>gb|BC059125.1| Rattus norvegicus farensyl diphosphate synthase, mRNA (cDNA clone MGC:72758 IMAGE:6919326), complete cds Length = 1229 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tactacctcaacctgctgga 379 |||||||||||||||||||| Sbjct: 539 tactacctcaacctgctgga 558
>ref|NM_001039590.1| Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 3, mRNA Length = 12401 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gccgtcgccggccaaggagg 153 |||||||||||||||||||| Sbjct: 222 gccgtcgccggccaaggagg 241
>ref|NM_001039591.1| Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 4, mRNA Length = 12353 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gccgtcgccggccaaggagg 153 |||||||||||||||||||| Sbjct: 222 gccgtcgccggccaaggagg 241
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 cagcatgctcatggagctccatgctgat 266 |||||||||||||||||| || |||||| Sbjct: 4833639 cagcatgctcatggagctgcaagctgat 4833612
>ref|XM_747749.1| Aspergillus fumigatus Af293 cell division cycle protein 20 CDC20 (Afu1g14730) partial mRNA Length = 1860 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 352 ttgacgattactacctcaacctgctggactgg 383 |||| |||||||| ||||| |||||||||||| Sbjct: 908 ttgatgattactatctcaatctgctggactgg 939
>emb|AL391259.15| Human DNA sequence from clone RP11-469E19 on chromosome Xp11.4-21.2 Contains a chloride intracellular channel 4 (CLIC4) pseudogene the 5' end of the USP9X gene for X chromosome ubiquitin specific protease 9 (Drosophila fat facets related) and a CpG island, complete sequence Length = 163520 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gccgtcgccggccaaggagg 153 |||||||||||||||||||| Sbjct: 74946 gccgtcgccggccaaggagg 74965
>gb|AY321335.1| Rattus norvegicus Ac2-125 mRNA, complete cds Length = 2646 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tactacctcaacctgctgga 379 |||||||||||||||||||| Sbjct: 655 tactacctcaacctgctgga 674
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cggtgacgccgtcgccggcc 146 |||||||||||||||||||| Sbjct: 209002 cggtgacgccgtcgccggcc 209021
>emb|AL031024.1|DMC196F3 Drosophila melanogaster cosmid clone 196F3 Length = 35835 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atggacatggacatggcgca 88 |||||||||||||||||||| Sbjct: 24102 atggacatggacatggcgca 24083
>gb|AF435023.1| Aedes aegypti ETS transcription factor E74A (E74A) mRNA, complete cds Length = 5139 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tgctggcggagaagctgctc 185 |||||||||||||||||||| Sbjct: 732 tgctggcggagaagctgctc 751
>gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177096 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atggacatggacatggcgca 88 |||||||||||||||||||| Sbjct: 7203 atggacatggacatggcgca 7184
>gb|AY973541.1|AY973542S2 Hyaloperonospora parasitica isolate Emoy2 clone BAC 12I13, SP6 end Length = 57064 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gacgccgtcgccggccaagg 150 |||||||||||||||||||| Sbjct: 33750 gacgccgtcgccggccaagg 33731
>ref|XM_228802.3| PREDICTED: Rattus norvegicus similar to testis-specific farnesyl pyrophosphate synthetase (LOC317394), mRNA Length = 951 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tactacctcaacctgctgga 379 |||||||||||||||||||| Sbjct: 491 tactacctcaacctgctgga 510
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 aaggaggcgtaccggaagct 166 |||||||||||||||||||| Sbjct: 4212838 aaggaggcgtaccggaagct 4212857
>ref|XM_574968.1| PREDICTED: Rattus norvegicus similar to testis-specific farnesyl pyrophosphate synthetase (LOC361973), mRNA Length = 1122 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tactacctcaacctgctgga 379 |||||||||||||||||||| Sbjct: 471 tactacctcaacctgctgga 490
>gb|AC006121.1|AC006121 Homo sapiens chromosome X, clone hCIT.200_L_4, complete sequence Length = 183461 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gccgtcgccggccaaggagg 153 |||||||||||||||||||| Sbjct: 148569 gccgtcgccggccaaggagg 148550
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggttcatcccggacaggtcg 65 |||||||||||||||||||| Sbjct: 4625439 ggttcatcccggacaggtcg 4625420
>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete sequence Length = 304204 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atggacatggacatggcgca 88 |||||||||||||||||||| Sbjct: 69513 atggacatggacatggcgca 69494
>ref|NM_031840.1| Rattus norvegicus farensyl diphosphate synthase (Fdps), mRNA Length = 1271 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tactacctcaacctgctgga 379 |||||||||||||||||||| Sbjct: 611 tactacctcaacctgctgga 630
>gb|M89945.1|RATFARDIPH Rat farnesyl diphosphate synthase gene, exons 1-8 Length = 1898 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tactacctcaacctgctgga 379 |||||||||||||||||||| Sbjct: 1224 tactacctcaacctgctgga 1243
>gb|M34477.1|RATFAPS Rat testis-specific farnesyl pyrophosphate synthetase mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tactacctcaacctgctgga 379 |||||||||||||||||||| Sbjct: 611 tactacctcaacctgctgga 630
>gb|M17300.1|RATCR39 Rat cholesterol-regulated 39kd protein mRNA, complete cds Length = 1143 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tactacctcaacctgctgga 379 |||||||||||||||||||| Sbjct: 481 tactacctcaacctgctgga 500 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,353,140 Number of Sequences: 3902068 Number of extensions: 3353140 Number of successful extensions: 62980 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 62473 Number of HSP's gapped (non-prelim): 492 length of query: 526 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 503 effective length of database: 17,143,297,704 effective search space: 8623078745112 effective search space used: 8623078745112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)