| Clone Name | bags7p20 |
|---|---|
| Clone Library Name | barley_pub |
>VTNC_PIG (P48819) Vitronectin precursor (Serum spreading factor) (S-protein)| Length = 459 Score = 32.7 bits (73), Expect = 0.93 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +3 Query: 57 GRDACLGQKWHPQSNSTWQPWWLQRKDGQG 146 GR QK H QS STW PW+ + G G Sbjct: 365 GRGHSRSQKSHRQSRSTWLPWFSSEETGPG 394
>ADA2A_PIG (P18871) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) Length = 450 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +2 Query: 365 RRRPAA-GPLKPKTPAQTRRQSRADSTAWKGSRKRIRFQSFTLCLPLALGTWSCC 526 RR P A GP P T A R A ++ W+G + R + FT L + +G + C Sbjct: 334 RRGPGAPGPGAPATGAGEERGGVAKASRWRGRQNREK--RFTFVLAVVIGVFVVC 386
>LYXK_ECOLI (P37677) L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.53) (EC| 2.7.1.-) (L-xylulokinase) (3-dehydro-L-gulonate kinase) Length = 498 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +3 Query: 12 DLGGAXXYLGYFSTAGRDACLGQKWHPQSNSTWQPWWLQRKDGQGWACC 158 D GG+ G + GR+A G + P + QP W +R + W CC Sbjct: 9 DCGGSWLKAGLYDREGREA--GVQRLPLCALSPQPGWAERDMAELWQCC 55
>NIA_USTMA (Q05531) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 908 Score = 30.0 bits (66), Expect = 6.0 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 6/36 (16%) Frame = +1 Query: 55 RGEMLAWGKNGTRSQTRHGN------PGGSSGRMVK 144 +G ++AWG NG HG PG SGRMVK Sbjct: 208 KGMLIAWGLNGEDLSPDHGYPLRLVVPGQISGRMVK 243
>CDT1_HUMAN (Q9H211) DNA replication factor Cdt1 (Double parked homolog) (DUP)| Length = 546 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 5/44 (11%) Frame = +2 Query: 356 YTSRRRPAAGPLKP-----KTPAQTRRQSRADSTAWKGSRKRIR 472 + +RRRP + P +TP+ R RA ++A GSRKR R Sbjct: 9 FFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRAR 52
>LASS6_MOUSE (Q8C172) LAG1 longevity assurance homolog 6| Length = 384 Score = 30.0 bits (66), Expect = 6.0 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +2 Query: 131 EGWSRVGVLPSWWIISVMLM 190 E W VG PSWW+ +++L+ Sbjct: 290 ESWEIVGPYPSWWVFNLLLL 309
>LASS6_HUMAN (Q6ZMG9) LAG1 longevity assurance homolog 6| Length = 384 Score = 30.0 bits (66), Expect = 6.0 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +2 Query: 131 EGWSRVGVLPSWWIISVMLM 190 E W VG PSWW+ +++L+ Sbjct: 290 ESWEIVGPYPSWWVFNLLLL 309
>DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 467 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +2 Query: 380 AGPLKPKTPAQTRRQSRADSTAWKGSRKRIRFQSFTLCLPLALGTWSCC 526 A L P+TP QTRR+ RA T + R+ LP+ +G + C Sbjct: 366 AAALPPQTPPQTRRRRRAKITGRERKAMRV--------LPVVVGAFLLC 406
>FECR_ECOLI (P23485) Protein fecR| Length = 317 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 75 GQKWHPQSNSTWQPWWLQRKDGQGWACCQV 164 G++ PQ + WQ W+ Q +D Q WA QV Sbjct: 25 GERVSPQQEARWQQWYEQDQDNQ-WAWQQV 53
>VGLG_HRSV7 (P27026) Major surface glycoprotein G (Attachment glycoprotein G)| Length = 297 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = -2 Query: 207 ELSIKFISITEMIHQLGNTPTLDHPSAGATRVAMSSLTAGAIFAPGKHLSPQWRSSQDXX 28 +L I F +++E Q TP L PSA +T + + T + P + Q+ Sbjct: 96 QLGISFSNLSETTSQPATTPALTTPSAESTPQSTTVKTKNTTTTQIQPSKPTTKQHQNKP 155 Query: 27 WHLPNHH 7 + PN+H Sbjct: 156 PNKPNNH 162 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,092,855 Number of Sequences: 219361 Number of extensions: 1927245 Number of successful extensions: 5806 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5555 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5806 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)