ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8e24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN670_HUMAN (Q9BS34) Zinc finger protein 670 32 1.7
2CEL_BOVIN (P30122) Bile-salt-activated lipase precursor (EC 3.1.... 30 3.9
3TS1R1_RAT (Q9Z0R8) Taste receptor type 1 member 1 precursor (G-p... 30 6.6
4TS1R1_MOUSE (Q99PG6) Taste receptor type 1 member 1 precursor (G... 30 6.6
5PCX_DROME (P18490) Protein pecanex 30 6.6

>ZN670_HUMAN (Q9BS34) Zinc finger protein 670|
          Length = 389

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
 Frame = -1

Query: 500 GEPVSCHSAQHRSWSPGFRIEHHFKHQNL*LDSLFLCRHKKTNLLHGEQ-GKFRMQLTCR 324
           G+   CHSA HR         H   H     + LF C      L H +Q GK  + LT  
Sbjct: 109 GKVFICHSALHR---------HILSHIG---NKLFECEECPEKLYHCKQCGKAFISLTSV 156

Query: 323 SSWKMTVLSS--LKNPQGDKPHAMKTLMKMVPSTYHPEQS 210
               +T  S+   K P  +KP    ++ +M  STY  E++
Sbjct: 157 DRHMVTHTSNGPYKGPVYEKPFDFPSVFQMPQSTYTGEKT 196



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>CEL_BOVIN (P30122) Bile-salt-activated lipase precursor (EC 3.1.1.3) (EC|
           3.1.1.13) (BAL) (Bile-salt-stimulated lipase) (BSSL)
           (Carboxyl ester lipase) (Sterol esterase) (Cholesterol
           esterase) (Pancreatic lysophospholipase) (Fragment)
          Length = 597

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -1

Query: 518 TRWRRTGEPVSCHSAQHRSWSPGFRIEHHFKHQNL*LDSLFLCRHKKTNLL 366
           T + RTG+P + HS    +W P    + ++   N  +DS  +  H +TN L
Sbjct: 487 TNFARTGDPNTGHSTVPANWDPYTLEDDNYLEINKQMDSNSMKLHLRTNYL 537



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>TS1R1_RAT (Q9Z0R8) Taste receptor type 1 member 1 precursor (G-protein|
           coupled receptor 70)
          Length = 840

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 143 TIWNLWS-NAGGGSFVKISRQTFLLLLLXWMEERCPHPKAHVATRKHQ 3
           T +  W+ N G G FV +S    LL+ L W+    P P     TR++Q
Sbjct: 667 TFYRTWAQNHGAGLFVIVSSTVHLLICLTWLVMWTPRP-----TREYQ 709



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>TS1R1_MOUSE (Q99PG6) Taste receptor type 1 member 1 precursor (G-protein|
           coupled receptor 70)
          Length = 842

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 143 TIWNLWS-NAGGGSFVKISRQTFLLLLLXWMEERCPHPKAHVATRKHQ 3
           T ++ W+ N G G FV +S    L L L W+    P P     TR++Q
Sbjct: 669 TFYHTWAQNHGAGIFVIVSSTVHLFLCLTWLAMWTPRP-----TREYQ 711



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>PCX_DROME (P18490) Protein pecanex|
          Length = 3433

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 169  FRSTY*QGRPFGICGQMQEEAASSKYQDRHFCCCCYXGWRSAALIPKLMS 20
            FR TY        C Q + EA +   +D   CCCC  G      +P+L+S
Sbjct: 2198 FRGTY--------CQQREVEAITEDVEDNDGCCCCDPGH-----LPQLLS 2234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,032,588
Number of Sequences: 219361
Number of extensions: 1758098
Number of successful extensions: 4057
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4057
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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