ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags7p17 |
|---|---|
| Clone Library Name | barley_pub |
>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4| Length = 625 Score = 110 bits (276), Expect = 2e-24 Identities = 52/125 (41%), Positives = 78/125 (62%), Gaps = 5/125 (4%) Frame = +2 Query: 182 SAGFYLPGVAPNDFEKKDHLPVKVNKLTSIKTQLPYSFYSLPFCKPDTIVDSAENLGEVL 361 ++ FY+PGVAP +F + D + +K KLTS +TQLPY +YSLPFC+P I AENLGEVL Sbjct: 4 TSAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQPSKITYKAENLGEVL 63 Query: 362 RGDRIENSPYVFEMRVPQMCQIVCK-----ISVXXXXXXXXXXXXXDEYRVNMILDNLPL 526 RGDRI N+P+ M + C+++C +++ ++Y V++I DNLP+ Sbjct: 64 RGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRLVAERITEDYYVHLIADNLPV 123 Query: 527 VVPIQ 541 ++ Sbjct: 124 ATRLE 128
>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 73.9 bits (180), Expect = 3e-13 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 8/92 (8%) Frame = +2 Query: 182 SAGFYLPGVAPNDF--------EKKDHLPVKVNKLTSIKTQLPYSFYSLPFCKPDTIVDS 337 S GFYLPG+AP +F E K + + VN+L S+++ LPY + + FC+ Sbjct: 33 SGGFYLPGLAPVNFCDEEKKSDECKAEIELFVNRLDSVESVLPYEYTAFDFCQASEGKRP 92 Query: 338 AENLGEVLRGDRIENSPYVFEMRVPQMCQIVC 433 +ENLG+VL G+RIE SPY F + C++VC Sbjct: 93 SENLGQVLFGERIEPSPYKFTFNKEETCKLVC 124
>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor| Length = 662 Score = 73.2 bits (178), Expect = 5e-13 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 7/92 (7%) Frame = +2 Query: 179 PSAGFYLPGVAPNDF-------EKKDHLPVKVNKLTSIKTQLPYSFYSLPFCKPDTIVDS 337 P + FYLPG+AP +F E K + + VN+L S+++ LPY + + FC+ Sbjct: 32 PGSAFYLPGLAPVNFCAEEKSNECKADIELFVNRLDSVESVLPYEYTAFDFCQASEGKRP 91 Query: 338 AENLGEVLRGDRIENSPYVFEMRVPQMCQIVC 433 +ENLG+VL G+RIE SPY F + C++VC Sbjct: 92 SENLGQVLFGERIEPSPYKFTFNKKETCKLVC 123
>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 73.2 bits (178), Expect = 5e-13 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 8/93 (8%) Frame = +2 Query: 179 PSAGFYLPGVAPNDF--------EKKDHLPVKVNKLTSIKTQLPYSFYSLPFCKPDTIVD 334 P + FYLPG+AP +F E K + + VN+L S+++ LPY + + FC+ Sbjct: 32 PGSAFYLPGLAPVNFCTEEKKSNECKAEIELFVNRLDSVESVLPYEYTAFDFCQASEGKR 91 Query: 335 SAENLGEVLRGDRIENSPYVFEMRVPQMCQIVC 433 +ENLG+VL G+RIE SPY F + C++VC Sbjct: 92 PSENLGQVLFGERIEPSPYKFTFNKEETCKLVC 124
>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor| (p76) Length = 663 Score = 71.6 bits (174), Expect = 1e-12 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 8/92 (8%) Frame = +2 Query: 182 SAGFYLPGVAPNDF--------EKKDHLPVKVNKLTSIKTQLPYSFYSLPFCKPDTIVDS 337 S FYLPG+AP +F E K + + VN+L S+++ LPY + + FC+ Sbjct: 33 SGAFYLPGLAPVNFCDEEKKSDECKAEIELFVNRLDSVESVLPYEYTAFDFCQASEGKRP 92 Query: 338 AENLGEVLRGDRIENSPYVFEMRVPQMCQIVC 433 +ENLG+VL G+RIE SPY F + C++VC Sbjct: 93 SENLGQVLFGERIEPSPYKFTFNKKETCKLVC 124
>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane| protein) (Pheromone alpha-factor transporter) (Acidic 24 kDa late endocytic intermediate component) Length = 667 Score = 66.2 bits (160), Expect = 6e-11 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 20/131 (15%) Frame = +2 Query: 191 FYLPGVAPNDFEKKDHLPVKVNKLT--------------------SIKTQLPYSFYSLPF 310 FYLPGVAP + + D++P+ VN LT + Y + F Sbjct: 23 FYLPGVAPTTYRENDNIPLLVNHLTPSMNYQHKDEDGNNVSGDKENFLYSYDYYYNRFHF 82 Query: 311 CKPDTIVDSAENLGEVLRGDRIENSPYVFEMRVPQMCQIVCKISVXXXXXXXXXXXXXDE 490 C+P+ + E+LG V+ GDRI NSP+ M + C+ +CK + + Sbjct: 83 CQPEKVEKQPESLGSVIFGDRIYNSPFQLNMLQEKECESLCKTVIPGDDAKFINKLIKNG 142 Query: 491 YRVNMILDNLP 523 + N ++D LP Sbjct: 143 FFQNWLIDGLP 153
>YEU3_YEAST (P40071) Hypothetical protein YER113C precursor| Length = 706 Score = 57.4 bits (137), Expect = 3e-08 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Frame = +2 Query: 206 VAPNDFEKKDHLPVKVNKLTSIKTQLPYSFYSLPFCKPDTIVDSA--ENLGEVLRGDRIE 379 + PN + K D L + VNK+ S TQLPY++Y LPF P T+ +L E++RGDR Sbjct: 52 ITPNFYRKGDPLELIVNKVESDLTQLPYAYYDLPFTCPPTMHKKPLHLSLNEIIRGDRKW 111 Query: 380 NSPYVFEMRVPQMCQIVCKISVXXXXXXXXXXXXXDEYRVNMILDN 517 S Y + C+ +C + Y V ++D+ Sbjct: 112 ESDYKLKFGEDNPCETLCARKTTKEGMQTLDKLVREGYVVQWLIDD 157
>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 48.9 bits (115), Expect = 9e-06 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 2/111 (1%) Frame = +2 Query: 200 PGV-APNDFEKKDHLPVKVNKLTSIKT-QLPYSFYSLPFCKPDTIVDSAENLGEVLRGDR 373 PGV ++ D + + VNK+ Q Y +Y LP C P+ I + +LGEVL GDR Sbjct: 28 PGVEGVTHYKAGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKIRHKSLSLGEVLDGDR 87 Query: 374 IENSPYVFEMRVPQMCQIVCKISVXXXXXXXXXXXXXDEYRVNMILDNLPL 526 + S Y R +I+C + + + Y ++D+LP+ Sbjct: 88 MAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPI 138
>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor| (hMP70) Length = 606 Score = 48.9 bits (115), Expect = 9e-06 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 2/111 (1%) Frame = +2 Query: 200 PGV-APNDFEKKDHLPVKVNKLTSIKT-QLPYSFYSLPFCKPDTIVDSAENLGEVLRGDR 373 PGV ++ D + + VNK+ Q Y +Y LP C P+ I + +LGEVL GDR Sbjct: 28 PGVEGVTHYKAGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKIRHKSLSLGEVLDGDR 87 Query: 374 IENSPYVFEMRVPQMCQIVCKISVXXXXXXXXXXXXXDEYRVNMILDNLPL 526 + S Y R +I+C + + + Y ++D+LP+ Sbjct: 88 MAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPI 138
>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 48.1 bits (113), Expect = 2e-05 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 1/103 (0%) Frame = +2 Query: 221 FEKKDHLPVKVNKLTSIKT-QLPYSFYSLPFCKPDTIVDSAENLGEVLRGDRIENSPYVF 397 ++ D + + VNK+ Q Y +Y LP C P+ I + +LGEVL GDR+ S Y Sbjct: 36 YKPGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKIRHKSLSLGEVLDGDRMAESLYEI 95 Query: 398 EMRVPQMCQIVCKISVXXXXXXXXXXXXXDEYRVNMILDNLPL 526 R +I+C + + + Y ++D+LP+ Sbjct: 96 RFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPI 138
>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor| Length = 589 Score = 48.1 bits (113), Expect = 2e-05 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 1/103 (0%) Frame = +2 Query: 221 FEKKDHLPVKVNKLTSIKT-QLPYSFYSLPFCKPDTIVDSAENLGEVLRGDRIENSPYVF 397 ++ D + + VNK+ Q Y +Y LP C P+ I + +LGEVL GDR+ S Y Sbjct: 36 YKPGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEKIRHKSLSLGEVLDGDRMAESLYEI 95 Query: 398 EMRVPQMCQIVCKISVXXXXXXXXXXXXXDEYRVNMILDNLPL 526 R +I+C + + + Y ++D+LP+ Sbjct: 96 RFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPI 138
>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor| (SM-11044-binding protein) (EP70-P-iso) Length = 589 Score = 38.1 bits (87), Expect = 0.017 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%) Frame = +2 Query: 278 QLPYSFYSLPFC--KPDTIVDSAENLGEVLRGDRIENSPYVFEMRVPQMCQIVCKISVXX 451 Q Y ++SLPFC +I E LGE L+G +E S + + M C+I + Sbjct: 55 QETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPATYCEIDLDK 114 Query: 452 XXXXXXXXXXXDEYRVNMILDNLPL 526 + Y M +D+LP+ Sbjct: 115 EKRDAFVYAIKNHYWYQMYIDDLPI 139
>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor| Length = 587 Score = 37.7 bits (86), Expect = 0.022 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%) Frame = +2 Query: 278 QLPYSFYSLPFC--KPDTIVDSAENLGEVLRGDRIENSPYVFEMRVPQMCQIVCKISVXX 451 Q Y ++SLPFC +I E LGE L+G +E S + + M C+I + Sbjct: 53 QETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPGTYCEIDLDK 112 Query: 452 XXXXXXXXXXXDEYRVNMILDNLPL 526 + Y M +D+LP+ Sbjct: 113 EKRDAFVYAIKNHYWYQMYIDDLPI 137
>RGA2_SCHPO (Q10164) Probable Rho-type GTPase-activating protein 2| Length = 1275 Score = 31.2 bits (69), Expect = 2.0 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -2 Query: 265 SQFIDFHREMVFLFEVVGRDAGEVESGGRDNEEAECGEDNEQ 140 ++ I FH E FLFE + ++ E+E + +E ED E+ Sbjct: 30 AEIIYFHAETTFLFEKIMKEGNELEKYSKIELNSEIWEDEEE 71
>SIA8F_MOUSE (Q8K4T1) Alpha-2,8-sialyltransferase 8F (EC 2.4.99.-) (ST8Sia VI)| Length = 398 Score = 30.0 bits (66), Expect = 4.5 Identities = 17/65 (26%), Positives = 28/65 (43%) Frame = +2 Query: 218 DFEKKDHLPVKVNKLTSIKTQLPYSFYSLPFCKPDTIVDSAENLGEVLRGDRIENSPYVF 397 + E K H+P++ N P+ Y C +V + L + L G I+ S +VF Sbjct: 155 EVESKKHIPIRENIFHMFPVSQPFVDYPYNQC---AVVGNGGILNKSLCGAEIDKSDFVF 211 Query: 398 EMRVP 412 +P Sbjct: 212 RCNLP 216
>CAP_SCHPO (P36621) Adenylyl cyclase-associated protein (CAP)| Length = 551 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = -3 Query: 459 PSFSPTEILQTI*HI*GTLISNTYGEFSMRSPRRTSPRFSALSTIVSGL 313 P E+L+ + I L++ T ++R RT+P F+ LST++SG+ Sbjct: 158 PDMDSPELLEFLKPIQSELLTIT----NIRDEHRTAPEFNQLSTVMSGI 202
>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 474 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +1 Query: 7 LVASCNGKAHSPLVTLTGPSARANRERTTASVPHDDIAAGNGGGS 141 +V + G AH+ LV L + + R +SV H DI GGS Sbjct: 196 MVVAGTGVAHAELVDLVSKAFVPSSTRAPSSVTHSDIETAYVGGS 240 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,459,011 Number of Sequences: 219361 Number of extensions: 1391991 Number of successful extensions: 4622 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 4473 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4614 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
