ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags7p13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATG26_LEPMC (Q8NJS1) Sterol 3-beta-glucosyltransferase (EC 2.4.1... 32 1.6
2Y1582_METJA (Q58977) Putative deoxyribonuclease MJ1582 (EC 3.1.2... 31 2.1
3CI094_HUMAN (Q496M8) Protein C9orf94 precursor 31 2.7
4IDUA_MOUSE (P48441) Alpha-L-iduronidase precursor (EC 3.2.1.76) 30 6.0
5CBRC_DICD3 (Q47086) Achromobactin transport system permease prot... 29 7.8

>ATG26_LEPMC (Q8NJS1) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26) (UDP-glycosyltransferase
           51)
          Length = 1456

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/40 (30%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
 Frame = +1

Query: 295 LQKKLQHHSKLFL---HLCIQTLKPTQESQVLFPMQATEN 405
           LQ+ L ++ K+++   + C ++L PT +++++ PM+  EN
Sbjct: 796 LQRVLPNYGKIYISGRYFCFRSLMPTSKTKIILPMKDIEN 835



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>Y1582_METJA (Q58977) Putative deoxyribonuclease MJ1582 (EC 3.1.21.-)|
          Length = 249

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 274 HIISRNVLQKKLQHHSKLFLHLCIQTLKPTQESQVLFPMQATENSP 411
           H+IS + L    +HH KL   L ++ L    +S  L P++ T+N P
Sbjct: 167 HLISISTLVCFSEHHKKLVESLDLEYLTTETDSPYLSPIKGTKNEP 212



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>CI094_HUMAN (Q496M8) Protein C9orf94 precursor|
          Length = 467

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -2

Query: 453 EACQALPLXQPSQ-AWTVLCGLHWEQYL*FLCRLQCLN 343
           E C ALP    +Q  W+  C +HW   L  LC   C N
Sbjct: 352 EQCSALPRPVSTQNCWSEACSVHWRVSLWTLCTATCGN 389



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>IDUA_MOUSE (P48441) Alpha-L-iduronidase precursor (EC 3.2.1.76)|
          Length = 634

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 286 RNVLQKKLQHHSKLFLHLCIQTLKPTQESQVLFPMQATENSPSLGWLXQRKSLTC 450
           R  L +KL   S L +H+C + LKP  +   L  +  T     L W  +R    C
Sbjct: 513 RLTLHRKLPVPSLLLVHVCTRPLKPPGQVSRLRALPLTHGQLILVWSDERVGSKC 567



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>CBRC_DICD3 (Q47086) Achromobactin transport system permease protein cbrC|
          Length = 349

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 306 ATTSFKVIPPPVHSDTEAYTGITGTVPNAGHREQSKLG 419
           A T+F ++  P+ +   AY  +TG+V  A  RE  +LG
Sbjct: 180 AATTFMLVFSPLTTTLSAYVWLTGSVYGASWRETRELG 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,929,515
Number of Sequences: 219361
Number of extensions: 1543067
Number of successful extensions: 3745
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3743
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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