| Clone Name | bags8e19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G03, full insert sequence Length = 1153 Score = 581 bits (293), Expect = e-163 Identities = 404/440 (91%), Gaps = 1/440 (0%) Strand = Plus / Plus Query: 4 tcgccgacaagnatcggggccatgctcctctgcgacatggcgcacatcagcgggctggtc 63 ||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct: 57 tcgccgacaagg-tcggggcgctgctcctctgcgacatggcgcacatcagcggcctcgtc 115 Query: 64 gccgcgcaggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacac 123 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| Sbjct: 116 gccgcgcaggaagctgcaaatccttttgagtactgtgatgtggttaccaccaccacgcac 175 Query: 124 aagtccctccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcg 183 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | Sbjct: 176 aagtccctccgaggaccaagagctggcatgatcttctacaggaagggccctaagcctccc 235 Query: 184 aagaagggccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtg 243 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||| Sbjct: 236 aagaagggccagcctgagggtgctgtctatgactacgaggacaagatcaacttcgcagtg 295 Query: 244 ttcccatcgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctg 303 ||||| || || || |||||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct: 296 ttcccgtcactgcaaggtggtcctcacaaccaccagattgcagcccttgctgttgctctg 355 Query: 304 aagcaaactttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtt 363 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 cagcaaaccatgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtc 415 Query: 364 gccgttggaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaac 423 ||| |||| |||||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 416 gccattggcaagtatcttatgagcaagggctacaaaatggtgactgatggaactgagaac 475 Query: 424 caccttgttctatgggatct 443 ||||||||||| |||||||| Sbjct: 476 caccttgttctctgggatct 495
>dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C10, full insert sequence Length = 1811 Score = 581 bits (293), Expect = e-163 Identities = 404/440 (91%), Gaps = 1/440 (0%) Strand = Plus / Plus Query: 4 tcgccgacaagnatcggggccatgctcctctgcgacatggcgcacatcagcgggctggtc 63 ||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct: 691 tcgccgacaagg-tcggggcgctgctcctctgcgacatggcgcacatcagcggcctcgtc 749 Query: 64 gccgcgcaggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacac 123 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| Sbjct: 750 gccgcgcaggaagctgcaaatccttttgagtactgtgatgtggttaccaccaccacgcac 809 Query: 124 aagtccctccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcg 183 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | Sbjct: 810 aagtccctccgaggaccaagagctggcatgatcttctacaggaagggccctaagcctccc 869 Query: 184 aagaagggccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtg 243 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||| Sbjct: 870 aagaagggccagcctgagggtgctgtctatgactacgaggacaagatcaacttcgcagtg 929 Query: 244 ttcccatcgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctg 303 ||||| || || || |||||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct: 930 ttcccgtcactgcaaggtggtcctcacaaccaccagattgcagcccttgctgttgctctg 989 Query: 304 aagcaaactttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtt 363 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 cagcaaaccatgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtc 1049 Query: 364 gccgttggaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaac 423 ||| |||| |||||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 1050 gccattggcaagtatcttatgagcaagggctacaaaatggtgactgatggaactgagaac 1109 Query: 424 caccttgttctatgggatct 443 ||||||||||| |||||||| Sbjct: 1110 caccttgttctctgggatct 1129
>dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N02, full insert sequence Length = 1896 Score = 581 bits (293), Expect = e-163 Identities = 404/440 (91%), Gaps = 1/440 (0%) Strand = Plus / Plus Query: 4 tcgccgacaagnatcggggccatgctcctctgcgacatggcgcacatcagcgggctggtc 63 ||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct: 692 tcgccgacaagg-tcggggcgctgctcctctgcgacatggcgcacatcagcggcctcgtc 750 Query: 64 gccgcgcaggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacac 123 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| Sbjct: 751 gccgcgcaggaagctgcaaatccttttgagtactgtgatgtggttaccaccaccacgcac 810 Query: 124 aagtccctccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcg 183 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | Sbjct: 811 aagtccctccgaggaccaagagctggcatgatcttctacaggaagggccctaagcctccc 870 Query: 184 aagaagggccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtg 243 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||| Sbjct: 871 aagaagggccagcctgagggtgctgtctatgactacgaggacaagatcaacttcgcagtg 930 Query: 244 ttcccatcgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctg 303 ||||| || || || |||||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct: 931 ttcccgtcactgcaaggtggtcctcacaaccaccagattgcagcccttgctgttgctctg 990 Query: 304 aagcaaactttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtt 363 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 cagcaaaccatgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtc 1050 Query: 364 gccgttggaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaac 423 ||| |||| |||||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 1051 gccattggcaagtatcttatgagcaagggctacaaaatggtgactgatggaactgagaac 1110 Query: 424 caccttgttctatgggatct 443 ||||||||||| |||||||| Sbjct: 1111 caccttgttctctgggatct 1130
>dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100I04, full insert sequence Length = 1811 Score = 581 bits (293), Expect = e-163 Identities = 404/440 (91%), Gaps = 1/440 (0%) Strand = Plus / Plus Query: 4 tcgccgacaagnatcggggccatgctcctctgcgacatggcgcacatcagcgggctggtc 63 ||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct: 692 tcgccgacaagg-tcggggcgctgctcctctgcgacatggcgcacatcagcggcctcgtc 750 Query: 64 gccgcgcaggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacac 123 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| Sbjct: 751 gccgcgcaggaagctgcaaatccttttgagtactgtgatgtggttaccaccaccacgcac 810 Query: 124 aagtccctccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcg 183 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | Sbjct: 811 aagtccctccgaggaccaagagctggcatgatcttctacaggaagggccctaagcctccc 870 Query: 184 aagaagggccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtg 243 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||| Sbjct: 871 aagaagggccagcctgagggtgctgtctatgactacgaggacaagatcaacttcgcagtg 930 Query: 244 ttcccatcgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctg 303 ||||| || || || |||||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct: 931 ttcccgtcactgcaaggtggtcctcacaaccaccagattgcagcccttgctgttgctctg 990 Query: 304 aagcaaactttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtt 363 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 cagcaaaccatgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtc 1050 Query: 364 gccgttggaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaac 423 ||| |||| |||||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 1051 gccattggcaagtatcttatgagcaagggctacaaaatggtgactgatggaactgagaac 1110 Query: 424 caccttgttctatgggatct 443 ||||||||||| |||||||| Sbjct: 1111 caccttgttctctgggatct 1130
>gb|AY105338.1| Zea mays PCO102700 mRNA sequence Length = 1951 Score = 525 bits (265), Expect = e-146 Identities = 400/444 (90%), Gaps = 1/444 (0%) Strand = Plus / Plus Query: 4 tcgccgacaagnatcggggccatgctcctctgcgacatggcgcacatcagcgggctggtc 63 ||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| ||| Sbjct: 819 tcgccgacaagg-tcggggccctgctgctctgcgacatggcgcacatcagcgggctcgtc 877 Query: 64 gccgcgcaggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacac 123 ||||||||||||||||||||||||||||| | ||||||||||||||||| || || ||| Sbjct: 878 gccgcgcaggaagctgcaaatccttttgaatattgtgatgtggttaccacaaccacgcac 937 Query: 124 aagtccctccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcg 183 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 938 aagtccctcagagggccaagggctggcatgatcttctacaggaaaggccctaagcccccc 997 Query: 184 aagaagggccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtg 243 |||||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||| ||| Sbjct: 998 aagaagggccagcctgagggtgctgtttatgattacgaagacaagatcaactttgcagtg 1057 Query: 244 ttcccatcgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctg 303 |||||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||||| || Sbjct: 1058 ttcccatctctccaaggtggccctcacaaccaccagattgctgcacttgctgttgctcta 1117 Query: 304 aagcaaactttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtt 363 |||||||| || | ||||| ||||||||||| |||||||| || |||||||| |||||| Sbjct: 1118 cagcaaactatgtcgcctggcttcaaggcctatgcaaagcaagtgaaggccaatgctgtt 1177 Query: 364 gccgttggaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaac 423 || ||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1178 gcaattggaaactatctcatgagcaagggctacaagatggtgactgatggaactgagaac 1237 Query: 424 caccttgttctatgggatctccgc 447 ||||||||||| |||||||||||| Sbjct: 1238 caccttgttctctgggatctccgc 1261
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 502 bits (253), Expect = e-139 Identities = 343/373 (91%) Strand = Plus / Plus Query: 71 aggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacacaagtccc 130 |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| Sbjct: 85649 aggaagctgcaaatccttttgagtactgtgatgtggttaccaccaccacgcacaagtccc 85708 Query: 131 tccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagg 190 ||||||||||||| ||||||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 85709 tccgaggaccaagagctggcatgatcttctacaggaagggccctaagcctcccaagaagg 85768 Query: 191 gccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccat 250 ||||||||||||||||||| ||||||||||||||||| |||||||| || |||||||| | Sbjct: 85769 gccagcctgagggtgctgtctatgactacgaggacaagatcaacttcgcagtgttcccgt 85828 Query: 251 cgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaa 310 | || || |||||||||||||||||||| ||||| |||||||| ||||| ||| |||||| Sbjct: 85829 cactgcaaggtggtcctcacaaccaccagattgcagcccttgctgttgctctgcagcaaa 85888 Query: 311 ctttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttg 370 | ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 85889 ccatgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtcgccattg 85948 Query: 371 gaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccaccttg 430 | |||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 85949 gcaagtatcttatgagcaagggctacaaaatggtgactgatggaactgagaaccaccttg 86008 Query: 431 ttctatgggatct 443 |||| |||||||| Sbjct: 86009 ttctctgggatct 86021 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/70 (91%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 4 tcgccgacaagnatcggggccatgctcctctgcgacatggcgcacatcagcgggctggtc 63 ||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct: 84533 tcgccgacaagg-tcggggcgctgctcctctgcgacatggcgcacatcagcggcctcgtc 84591 Query: 64 gccgcgcagg 73 |||||||||| Sbjct: 84592 gccgcgcagg 84601
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 502 bits (253), Expect = e-139 Identities = 343/373 (91%) Strand = Plus / Plus Query: 71 aggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacacaagtccc 130 |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| Sbjct: 14862583 aggaagctgcaaatccttttgagtactgtgatgtggttaccaccaccacgcacaagtccc 14862642 Query: 131 tccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagg 190 ||||||||||||| ||||||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 14862643 tccgaggaccaagagctggcatgatcttctacaggaagggccctaagcctcccaagaagg 14862702 Query: 191 gccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccat 250 ||||||||||||||||||| ||||||||||||||||| |||||||| || |||||||| | Sbjct: 14862703 gccagcctgagggtgctgtctatgactacgaggacaagatcaacttcgcagtgttcccgt 14862762 Query: 251 cgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaa 310 | || || |||||||||||||||||||| ||||| |||||||| ||||| ||| |||||| Sbjct: 14862763 cactgcaaggtggtcctcacaaccaccagattgcagcccttgctgttgctctgcagcaaa 14862822 Query: 311 ctttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttg 370 | ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 14862823 ccatgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtcgccattg 14862882 Query: 371 gaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccaccttg 430 | |||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 14862883 gcaagtatcttatgagcaagggctacaaaatggtgactgatggaactgagaaccaccttg 14862942 Query: 431 ttctatgggatct 443 |||| |||||||| Sbjct: 14862943 ttctctgggatct 14862955 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/70 (91%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 4 tcgccgacaagnatcggggccatgctcctctgcgacatggcgcacatcagcgggctggtc 63 ||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct: 14861467 tcgccgacaagg-tcggggcgctgctcctctgcgacatggcgcacatcagcggcctcgtc 14861525 Query: 64 gccgcgcagg 73 |||||||||| Sbjct: 14861526 gccgcgcagg 14861535
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 502 bits (253), Expect = e-139 Identities = 343/373 (91%) Strand = Plus / Plus Query: 71 aggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacacaagtccc 130 |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| Sbjct: 14942550 aggaagctgcaaatccttttgagtactgtgatgtggttaccaccaccacgcacaagtccc 14942609 Query: 131 tccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagg 190 ||||||||||||| ||||||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 14942610 tccgaggaccaagagctggcatgatcttctacaggaagggccctaagcctcccaagaagg 14942669 Query: 191 gccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccat 250 ||||||||||||||||||| ||||||||||||||||| |||||||| || |||||||| | Sbjct: 14942670 gccagcctgagggtgctgtctatgactacgaggacaagatcaacttcgcagtgttcccgt 14942729 Query: 251 cgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaa 310 | || || |||||||||||||||||||| ||||| |||||||| ||||| ||| |||||| Sbjct: 14942730 cactgcaaggtggtcctcacaaccaccagattgcagcccttgctgttgctctgcagcaaa 14942789 Query: 311 ctttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttg 370 | ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 14942790 ccatgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgtcgccattg 14942849 Query: 371 gaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccaccttg 430 | |||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 14942850 gcaagtatcttatgagcaagggctacaaaatggtgactgatggaactgagaaccaccttg 14942909 Query: 431 ttctatgggatct 443 |||| |||||||| Sbjct: 14942910 ttctctgggatct 14942922 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/70 (91%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 4 tcgccgacaagnatcggggccatgctcctctgcgacatggcgcacatcagcgggctggtc 63 ||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct: 14941434 tcgccgacaagg-tcggggcgctgctcctctgcgacatggcgcacatcagcggcctcgtc 14941492 Query: 64 gccgcgcagg 73 |||||||||| Sbjct: 14941493 gccgcgcagg 14941502
>dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L02, full insert sequence Length = 1944 Score = 274 bits (138), Expect = 2e-70 Identities = 351/422 (83%) Strand = Plus / Plus Query: 22 gccatgctcctctgcgacatggcgcacatcagcgggctggtcgccgcgcaggaagctgca 81 |||||| | |||||||||||||| |||||||| || || || ||||||||||| |||||| Sbjct: 906 gccatgttgctctgcgacatggctcacatcagtggcctagttgccgcgcaggaggctgca 965 Query: 82 aatccttttgagttctgtgatgtggttaccaccacaacacacaagtccctccgaggacca 141 ||||||||| | | | |||||||||||||||||| || |||||| |||||||| ||| Sbjct: 966 aatccttttcaatattctgatgtggttaccaccaccacccacaagagtctccgagggcca 1025 Query: 142 agggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagggccagcctgag 201 || |||| ||||||||||||||||| |||| |||||| | ||||| |||||||||||| Sbjct: 1026 agatctggtatgatcttctacaggaagggcctgaagcctcccaagaaaggccagcctgag 1085 Query: 202 ggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccatcgctccagggt 261 || ||| |||||||||||||||||| |||||||| || ||||| || |||||||| || Sbjct: 1086 ggcgctctgtatgactacgaggacaggatcaacttcgcagtgtttccgtcgctccaaggg 1145 Query: 262 ggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaactttgacacct 321 || ||||||||||||||||||||||| || || |||| ||||||| ||| || ||||| Sbjct: 1146 ggccctcacaaccaccaaattgctgcgctagcggttggtttgaagcagactatgtcacct 1205 Query: 322 ggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctc 381 ||||||||| | || ||||||||||||||||| ||||||||| |||| || || | Sbjct: 1206 ggattcaagtcttatattaagcaggtcaaggccaatgctgttgcccttggtaaccatttg 1265 Query: 382 atgagcaagggctacaagatggtgaccgatggaactgacaaccaccttgttctatgggat 441 ||||| ||||||||||| |||| || || ||||| || ||||| |||||||| |||||| Sbjct: 1266 atgagtaagggctacaaattggttactgacggaacagagaaccatcttgttctctgggat 1325 Query: 442 ct 443 || Sbjct: 1326 ct 1327
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 232 bits (117), Expect = 8e-58 Identities = 309/373 (82%) Strand = Plus / Minus Query: 71 aggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacacaagtccc 130 |||| ||||||||||||||| | | | |||||||||||||||||| || |||||| | Sbjct: 12439011 aggaggctgcaaatccttttcaatattctgatgtggttaccaccaccacccacaagagtc 12438952 Query: 131 tccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagg 190 ||||||| ||||| |||| ||||||||||||||||| |||| |||||| | ||||| | Sbjct: 12438951 tccgagggccaagatctggtatgatcttctacaggaagggcctgaagcctcccaagaaag 12438892 Query: 191 gccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccat 250 ||||||||||||| ||| |||||||||||||||||| |||||||| || ||||| || | Sbjct: 12438891 gccagcctgagggcgctctgtatgactacgaggacaggatcaacttcgcagtgtttccgt 12438832 Query: 251 cgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaa 310 ||||||| || || ||||||||||||||||||||||| || || |||| ||||||| | Sbjct: 12438831 cgctccaagggggccctcacaaccaccaaattgctgcgctagcggttggtttgaagcaga 12438772 Query: 311 ctttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttg 370 || || |||||||||||||| | || ||||||||||||||||| ||||||||| ||| Sbjct: 12438771 ctatgtcacctggattcaagtcttatattaagcaggtcaaggccaatgctgttgcccttg 12438712 Query: 371 gaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccaccttg 430 | || || | ||||| ||||||||||| |||| || || ||||| || ||||| |||| Sbjct: 12438711 gtaaccatttgatgagtaagggctacaaattggttactgacggaacagagaaccatcttg 12438652 Query: 431 ttctatgggatct 443 |||| |||||||| Sbjct: 12438651 ttctctgggatct 12438639 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 22 gccatgctcctctgcgacatggcgcacatcagcgggctggtcgccgcgcagg 73 |||||| | |||||||||||||| |||||||| || || || |||||||||| Sbjct: 12440046 gccatgttgctctgcgacatggctcacatcagtggcctagttgccgcgcagg 12439995
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 232 bits (117), Expect = 8e-58 Identities = 309/373 (82%) Strand = Plus / Minus Query: 71 aggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacacaagtccc 130 |||| ||||||||||||||| | | | |||||||||||||||||| || |||||| | Sbjct: 12393381 aggaggctgcaaatccttttcaatattctgatgtggttaccaccaccacccacaagagtc 12393322 Query: 131 tccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagg 190 ||||||| ||||| |||| ||||||||||||||||| |||| |||||| | ||||| | Sbjct: 12393321 tccgagggccaagatctggtatgatcttctacaggaagggcctgaagcctcccaagaaag 12393262 Query: 191 gccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccat 250 ||||||||||||| ||| |||||||||||||||||| |||||||| || ||||| || | Sbjct: 12393261 gccagcctgagggcgctctgtatgactacgaggacaggatcaacttcgcagtgtttccgt 12393202 Query: 251 cgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaa 310 ||||||| || || ||||||||||||||||||||||| || || |||| ||||||| | Sbjct: 12393201 cgctccaagggggccctcacaaccaccaaattgctgcgctagcggttggtttgaagcaga 12393142 Query: 311 ctttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttg 370 || || |||||||||||||| | || ||||||||||||||||| ||||||||| ||| Sbjct: 12393141 ctatgtcacctggattcaagtcttatattaagcaggtcaaggccaatgctgttgcccttg 12393082 Query: 371 gaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccaccttg 430 | || || | ||||| ||||||||||| |||| || || ||||| || ||||| |||| Sbjct: 12393081 gtaaccatttgatgagtaagggctacaaattggttactgacggaacagagaaccatcttg 12393022 Query: 431 ttctatgggatct 443 |||| |||||||| Sbjct: 12393021 ttctctgggatct 12393009 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 22 gccatgctcctctgcgacatggcgcacatcagcgggctggtcgccgcgcagg 73 |||||| | |||||||||||||| |||||||| || || || |||||||||| Sbjct: 12394416 gccatgttgctctgcgacatggctcacatcagtggcctagttgccgcgcagg 12394365
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 232 bits (117), Expect = 8e-58 Identities = 309/373 (82%) Strand = Plus / Minus Query: 71 aggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacacaagtccc 130 |||| ||||||||||||||| | | | |||||||||||||||||| || |||||| | Sbjct: 153376 aggaggctgcaaatccttttcaatattctgatgtggttaccaccaccacccacaagagtc 153317 Query: 131 tccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagg 190 ||||||| ||||| |||| ||||||||||||||||| |||| |||||| | ||||| | Sbjct: 153316 tccgagggccaagatctggtatgatcttctacaggaagggcctgaagcctcccaagaaag 153257 Query: 191 gccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccat 250 ||||||||||||| ||| |||||||||||||||||| |||||||| || ||||| || | Sbjct: 153256 gccagcctgagggcgctctgtatgactacgaggacaggatcaacttcgcagtgtttccgt 153197 Query: 251 cgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaa 310 ||||||| || || ||||||||||||||||||||||| || || |||| ||||||| | Sbjct: 153196 cgctccaagggggccctcacaaccaccaaattgctgcgctagcggttggtttgaagcaga 153137 Query: 311 ctttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttg 370 || || |||||||||||||| | || ||||||||||||||||| ||||||||| ||| Sbjct: 153136 ctatgtcacctggattcaagtcttatattaagcaggtcaaggccaatgctgttgcccttg 153077 Query: 371 gaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccaccttg 430 | || || | ||||| ||||||||||| |||| || || ||||| || ||||| |||| Sbjct: 153076 gtaaccatttgatgagtaagggctacaaattggttactgacggaacagagaaccatcttg 153017 Query: 431 ttctatgggatct 443 |||| |||||||| Sbjct: 153016 ttctctgggatct 153004 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 22 gccatgctcctctgcgacatggcgcacatcagcgggctggtcgccgcgcagg 73 |||||| | |||||||||||||| |||||||| || || || |||||||||| Sbjct: 154411 gccatgttgctctgcgacatggctcacatcagtggcctagttgccgcgcagg 154360
>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132241 Score = 232 bits (117), Expect = 8e-58 Identities = 309/373 (82%) Strand = Plus / Minus Query: 71 aggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacacaagtccc 130 |||| ||||||||||||||| | | | |||||||||||||||||| || |||||| | Sbjct: 40489 aggaggctgcaaatccttttcaatattctgatgtggttaccaccaccacccacaagagtc 40430 Query: 131 tccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagg 190 ||||||| ||||| |||| ||||||||||||||||| |||| |||||| | ||||| | Sbjct: 40429 tccgagggccaagatctggtatgatcttctacaggaagggcctgaagcctcccaagaaag 40370 Query: 191 gccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccat 250 ||||||||||||| ||| |||||||||||||||||| |||||||| || ||||| || | Sbjct: 40369 gccagcctgagggcgctctgtatgactacgaggacaggatcaacttcgcagtgtttccgt 40310 Query: 251 cgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaa 310 ||||||| || || ||||||||||||||||||||||| || || |||| ||||||| | Sbjct: 40309 cgctccaagggggccctcacaaccaccaaattgctgcgctagcggttggtttgaagcaga 40250 Query: 311 ctttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttg 370 || || |||||||||||||| | || ||||||||||||||||| ||||||||| ||| Sbjct: 40249 ctatgtcacctggattcaagtcttatattaagcaggtcaaggccaatgctgttgcccttg 40190 Query: 371 gaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccaccttg 430 | || || | ||||| ||||||||||| |||| || || ||||| || ||||| |||| Sbjct: 40189 gtaaccatttgatgagtaagggctacaaattggttactgacggaacagagaaccatcttg 40130 Query: 431 ttctatgggatct 443 |||| |||||||| Sbjct: 40129 ttctctgggatct 40117 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 22 gccatgctcctctgcgacatggcgcacatcagcgggctggtcgccgcgcagg 73 |||||| | |||||||||||||| |||||||| || || || |||||||||| Sbjct: 41524 gccatgttgctctgcgacatggctcacatcagtggcctagttgccgcgcagg 41473
>ref|NM_117467.2| Arabidopsis thaliana SHM4 (SERINE HYDROXYMETHYLTRANSFERASE 4); glycine hydroxymethyltransferase AT4G13930 (SHM4) mRNA, complete cds Length = 1810 Score = 196 bits (99), Expect = 4e-47 Identities = 330/407 (81%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggtcgccgcgcaggaagctgcaaatccttttgagttc 96 |||||||| |||||||| || || || || || |||||||||||||| || ||||||| | Sbjct: 728 gacatggctcacatcagtggtctcgttgctgctcaggaagctgcaaacccatttgagtac 787 Query: 97 tgtgatgtggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatc 156 ||||| || || || |||||||| |||||| | | || ||||||||||| ||||| Sbjct: 788 tgtgacgttgtgacaaccacaacccacaagagtttgaggggtccaagggctggtatgatt 847 Query: 157 ttctacaggaaaggccctaagcctgcgaagaagggccagcctgagggtgctgtgtatgac 216 ||||||||||| || || || || | |||||||| || || |||||||| || ||||| Sbjct: 848 ttctacaggaagggtccaaaaccaccaaagaagggtcaacccgagggtgcagtctatgat 907 Query: 217 tacgaggacaaaatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 | |||||||||||||||||||| || ||||| |||| || |||||||||||||| ||| Sbjct: 908 tttgaggacaaaatcaactttgctgtattccctgcgcttcaaggtggtcctcacaatcac 967 Query: 277 caaattgctgcccttgcagttgccctgaagcaaactttgacacctggattcaaggcctac 336 || |||| ||| || || ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 968 cagattggtgctctagctgttgcgttgaagcaggctaatactcctgggttcaaggtctac 1027 Query: 337 gcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctcatgagcaagggctac 396 ||||| || || || ||||| ||||||||| ||||||| || || ||||||||||| ||| Sbjct: 1028 gcaaaacaagtgaaagccaatgctgttgcccttggaaactacctaatgagcaagggttac 1087 Query: 397 aagatggtgaccgatggaactgacaaccaccttgttctatgggatct 443 |||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1088 cagattgtgaccaatggaactgagaaccaccttgttctctgggatct 1134
>gb|AY142551.1| Arabidopsis thaliana clone RAFL08-14-N15 (R11225) mRNA sequence Length = 3755 Score = 196 bits (99), Expect = 4e-47 Identities = 330/407 (81%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggtcgccgcgcaggaagctgcaaatccttttgagttc 96 |||||||| |||||||| || || || || || |||||||||||||| || ||||||| | Sbjct: 713 gacatggctcacatcagtggtctcgttgctgctcaggaagctgcaaacccatttgagtac 772 Query: 97 tgtgatgtggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatc 156 ||||| || || || |||||||| |||||| | | || ||||||||||| ||||| Sbjct: 773 tgtgacgttgtgacaaccacaacccacaagagtttgaggggtccaagggctggtatgatt 832 Query: 157 ttctacaggaaaggccctaagcctgcgaagaagggccagcctgagggtgctgtgtatgac 216 ||||||||||| || || || || | |||||||| || || |||||||| || ||||| Sbjct: 833 ttctacaggaagggtccaaaaccaccaaagaagggtcaacccgagggtgcagtctatgat 892 Query: 217 tacgaggacaaaatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 | |||||||||||||||||||| || ||||| |||| || |||||||||||||| ||| Sbjct: 893 tttgaggacaaaatcaactttgctgtattccctgcgcttcaaggtggtcctcacaatcac 952 Query: 277 caaattgctgcccttgcagttgccctgaagcaaactttgacacctggattcaaggcctac 336 || |||| ||| || || ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 953 cagattggtgctctagctgttgcgttgaagcaggctaatactcctgggttcaaggtctac 1012 Query: 337 gcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctcatgagcaagggctac 396 ||||| || || || ||||| ||||||||| ||||||| || || ||||||||||| ||| Sbjct: 1013 gcaaaacaagtgaaagccaatgctgttgcccttggaaactacctaatgagcaagggttac 1072 Query: 397 aagatggtgaccgatggaactgacaaccaccttgttctatgggatct 443 |||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1073 cagattgtgaccaatggaactgagaaccaccttgttctctgggatct 1119
>gb|AY093987.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds Length = 1416 Score = 196 bits (99), Expect = 4e-47 Identities = 330/407 (81%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggtcgccgcgcaggaagctgcaaatccttttgagttc 96 |||||||| |||||||| || || || || || |||||||||||||| || ||||||| | Sbjct: 643 gacatggctcacatcagtggtctcgttgctgctcaggaagctgcaaacccatttgagtac 702 Query: 97 tgtgatgtggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatc 156 ||||| || || || |||||||| |||||| | | || ||||||||||| ||||| Sbjct: 703 tgtgacgttgtgacaaccacaacccacaagagtttgaggggtccaagggctggtatgatt 762 Query: 157 ttctacaggaaaggccctaagcctgcgaagaagggccagcctgagggtgctgtgtatgac 216 ||||||||||| || || || || | |||||||| || || |||||||| || ||||| Sbjct: 763 ttctacaggaagggtccaaaaccaccaaagaagggtcaacccgagggtgcagtctatgat 822 Query: 217 tacgaggacaaaatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 | |||||||||||||||||||| || ||||| |||| || |||||||||||||| ||| Sbjct: 823 tttgaggacaaaatcaactttgctgtattccctgcgcttcaaggtggtcctcacaatcac 882 Query: 277 caaattgctgcccttgcagttgccctgaagcaaactttgacacctggattcaaggcctac 336 || |||| ||| || || ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 883 cagattggtgctctagctgttgcgttgaagcaggctaatactcctgggttcaaggtctac 942 Query: 337 gcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctcatgagcaagggctac 396 ||||| || || || ||||| ||||||||| ||||||| || || ||||||||||| ||| Sbjct: 943 gcaaaacaagtgaaagccaatgctgttgcccttggaaactacctaatgagcaagggttac 1002 Query: 397 aagatggtgaccgatggaactgacaaccaccttgttctatgggatct 443 |||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1003 cagattgtgaccaatggaactgagaaccaccttgttctctgggatct 1049
>gb|AF361589.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds Length = 1712 Score = 196 bits (99), Expect = 4e-47 Identities = 330/407 (81%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggtcgccgcgcaggaagctgcaaatccttttgagttc 96 |||||||| |||||||| || || || || || |||||||||||||| || ||||||| | Sbjct: 706 gacatggctcacatcagtggtctcgttgctgctcaggaagctgcaaacccatttgagtac 765 Query: 97 tgtgatgtggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatc 156 ||||| || || || |||||||| |||||| | | || ||||||||||| ||||| Sbjct: 766 tgtgacgttgtgacaaccacaacccacaagagtttgaggggtccaagggctggtatgatt 825 Query: 157 ttctacaggaaaggccctaagcctgcgaagaagggccagcctgagggtgctgtgtatgac 216 ||||||||||| || || || || | |||||||| || || |||||||| || ||||| Sbjct: 826 ttctacaggaagggtccaaaaccaccaaagaagggtcaacccgagggtgcagtctatgat 885 Query: 217 tacgaggacaaaatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 | |||||||||||||||||||| || ||||| |||| || |||||||||||||| ||| Sbjct: 886 tttgaggacaaaatcaactttgctgtattccctgcgcttcaaggtggtcctcacaatcac 945 Query: 277 caaattgctgcccttgcagttgccctgaagcaaactttgacacctggattcaaggcctac 336 || |||| ||| || || ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 946 cagattggtgctctagctgttgcgttgaagcaggctaatactcctgggttcaaggtctac 1005 Query: 337 gcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctcatgagcaagggctac 396 ||||| || || || ||||| ||||||||| ||||||| || || ||||||||||| ||| Sbjct: 1006 gcaaaacaagtgaaagccaatgctgttgcccttggaaactacctaatgagcaagggttac 1065 Query: 397 aagatggtgaccgatggaactgacaaccaccttgttctatgggatct 443 |||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1066 cagattgtgaccaatggaactgagaaccaccttgttctctgggatct 1112
>gb|AF324991.2|AF324991 Arabidopsis thaliana AT4g13930 (AT4g13930/dl3005c) mRNA, complete cds Length = 1716 Score = 196 bits (99), Expect = 4e-47 Identities = 330/407 (81%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggtcgccgcgcaggaagctgcaaatccttttgagttc 96 |||||||| |||||||| || || || || || |||||||||||||| || ||||||| | Sbjct: 710 gacatggctcacatcagtggtctcgttgctgctcaggaagctgcaaacccatttgagtac 769 Query: 97 tgtgatgtggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatc 156 ||||| || || || |||||||| |||||| | | || ||||||||||| ||||| Sbjct: 770 tgtgacgttgtgacaaccacaacccacaagagtttgaggggtccaagggctggtatgatt 829 Query: 157 ttctacaggaaaggccctaagcctgcgaagaagggccagcctgagggtgctgtgtatgac 216 ||||||||||| || || || || | |||||||| || || |||||||| || ||||| Sbjct: 830 ttctacaggaagggtccaaaaccaccaaagaagggtcaacccgagggtgcagtctatgat 889 Query: 217 tacgaggacaaaatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 | |||||||||||||||||||| || ||||| |||| || |||||||||||||| ||| Sbjct: 890 tttgaggacaaaatcaactttgctgtattccctgcgcttcaaggtggtcctcacaatcac 949 Query: 277 caaattgctgcccttgcagttgccctgaagcaaactttgacacctggattcaaggcctac 336 || |||| ||| || || ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 950 cagattggtgctctagctgttgcgttgaagcaggctaatactcctgggttcaaggtctac 1009 Query: 337 gcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctcatgagcaagggctac 396 ||||| || || || ||||| ||||||||| ||||||| || || ||||||||||| ||| Sbjct: 1010 gcaaaacaagtgaaagccaatgctgttgcccttggaaactacctaatgagcaagggttac 1069 Query: 397 aagatggtgaccgatggaactgacaaccaccttgttctatgggatct 443 |||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1070 cagattgtgaccaatggaactgagaaccaccttgttctctgggatct 1116
>emb|BX827403.1|CNS0A2GP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1624 Score = 196 bits (99), Expect = 4e-47 Identities = 330/407 (81%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggtcgccgcgcaggaagctgcaaatccttttgagttc 96 |||||||| |||||||| || || || || || |||||||||||||| || ||||||| | Sbjct: 701 gacatggctcacatcagtggtctcgttgctgctcaggaagctgcaaacccatttgagtac 760 Query: 97 tgtgatgtggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatc 156 ||||| || || || |||||||| |||||| | | || ||||||||||| ||||| Sbjct: 761 tgtgacgttgtgacaaccacaacccacaagagtttgaggggtccaagggctggtatgatt 820 Query: 157 ttctacaggaaaggccctaagcctgcgaagaagggccagcctgagggtgctgtgtatgac 216 ||||||||||| || || || || | |||||||| || || |||||||| || ||||| Sbjct: 821 ttctacaggaagggtccaaaaccaccaaagaagggtcaacccgagggtgcagtctatgat 880 Query: 217 tacgaggacaaaatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 | |||||||||||||||||||| || ||||| |||| || |||||||||||||| ||| Sbjct: 881 tttgaggacaaaatcaactttgctgtattccctgcgcttcaaggtggtcctcacaatcac 940 Query: 277 caaattgctgcccttgcagttgccctgaagcaaactttgacacctggattcaaggcctac 336 || |||| ||| || || ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 941 cagattggtgctctagctgttgcgttgaagcaggctaatactcctgggttcaaggtctac 1000 Query: 337 gcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctcatgagcaagggctac 396 ||||| || || || ||||| ||||||||| ||||||| || || ||||||||||| ||| Sbjct: 1001 gcaaaacaagtgaaagccaatgctgttgcccttggaaactacctaatgagcaagggttac 1060 Query: 397 aagatggtgaccgatggaactgacaaccaccttgttctatgggatct 443 |||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1061 cagattgtgaccaatggaactgagaaccaccttgttctctgggatct 1107
>gb|AY086929.1| Arabidopsis thaliana clone 29662 mRNA, complete sequence Length = 1723 Score = 188 bits (95), Expect = 1e-44 Identities = 329/407 (80%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggtcgccgcgcaggaagctgcaaatccttttgagttc 96 |||||||| |||||||| || || || || || |||||||||||||| || ||||||| | Sbjct: 722 gacatggctcacatcagtggtctcgttgctgctcaggaagctgcaaacccatttgagtac 781 Query: 97 tgtgatgtggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatc 156 ||||| || || || |||||||| |||||| | | || ||||||||||| ||||| Sbjct: 782 tgtgacgttgtgacaaccacaacccacaagagtttgaggggtccaagggctggtatgatt 841 Query: 157 ttctacaggaaaggccctaagcctgcgaagaagggccagcctgagggtgctgtgtatgac 216 ||||||||||| || || || || | |||||||| || || |||||||| || ||||| Sbjct: 842 ttctacaggaagggtccaaaaccaccaaagaagggtcaacccgagggtgcagtctatgat 901 Query: 217 tacgaggacaaaatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 | |||||||||||||||||||| || ||||| |||| || |||||||||||||| ||| Sbjct: 902 tttgaggacaaaatcaactttgctgtattccctgcgcttcaaggtggtcctcacaatcac 961 Query: 277 caaattgctgcccttgcagttgccctgaagcaaactttgacacctggattcaaggcctac 336 || |||| ||| | || ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 962 cagattggtgctttagctgttgcgttgaagcaggctaatactcctgggttcaaggtctac 1021 Query: 337 gcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctcatgagcaagggctac 396 ||||| || || || ||||| ||||||||| ||||||| || || ||||||||||| ||| Sbjct: 1022 gcaaaacaagtgaaagccaatgctgttgcccttggaaactacctaatgagcaagggttac 1081 Query: 397 aagatggtgaccgatggaactgacaaccaccttgttctatgggatct 443 |||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1082 cagattgtgaccaatggaactgagaaccaccttgttctctgggatct 1128
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 186 bits (94), Expect = 4e-44 Identities = 304/374 (81%) Strand = Plus / Minus Query: 70 caggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacacaagtcc 129 |||||||||||||| || ||||||| |||||| || || || |||||||| |||||| Sbjct: 6829 caggaagctgcaaacccatttgagtactgtgacgttgtgacaaccacaacccacaagagt 6770 Query: 130 ctccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaag 189 | | || ||||||||||| ||||| ||||||||||| || || || || | |||||| Sbjct: 6769 ttgaggggtccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaag 6710 Query: 190 ggccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttccca 249 || || || |||||||| || ||||| | |||||||||||||||||||| || ||||| Sbjct: 6709 ggtcaacccgagggtgcagtctatgattttgaggacaaaatcaactttgctgtattccct 6650 Query: 250 tcgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaa 309 |||| || |||||||||||||| ||||| |||| ||| || || ||||| ||||||| Sbjct: 6649 gcgcttcaaggtggtcctcacaatcaccagattggtgctctagctgttgcgttgaagcag 6590 Query: 310 actttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgtt 369 || || ||||| ||||||| ||||||||| || || || ||||| ||||||||| || Sbjct: 6589 gctaatactcctgggttcaaggtctacgcaaaacaagtgaaagccaatgctgttgccctt 6530 Query: 370 ggaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccacctt 429 ||||| || || ||||||||||| ||| |||| |||||| |||||||||| ||||||||| Sbjct: 6529 ggaaactacctaatgagcaagggttaccagattgtgaccaatggaactgagaaccacctt 6470 Query: 430 gttctatgggatct 443 ||||| |||||||| Sbjct: 6469 gttctctgggatct 6456
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 186 bits (94), Expect = 4e-44 Identities = 304/374 (81%) Strand = Plus / Minus Query: 70 caggaagctgcaaatccttttgagttctgtgatgtggttaccaccacaacacacaagtcc 129 |||||||||||||| || ||||||| |||||| || || || |||||||| |||||| Sbjct: 141044 caggaagctgcaaacccatttgagtactgtgacgttgtgacaaccacaacccacaagagt 140985 Query: 130 ctccgaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaag 189 | | || ||||||||||| ||||| ||||||||||| || || || || | |||||| Sbjct: 140984 ttgaggggtccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaag 140925 Query: 190 ggccagcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttccca 249 || || || |||||||| || ||||| | |||||||||||||||||||| || ||||| Sbjct: 140924 ggtcaacccgagggtgcagtctatgattttgaggacaaaatcaactttgctgtattccct 140865 Query: 250 tcgctccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaa 309 |||| || |||||||||||||| ||||| |||| ||| || || ||||| ||||||| Sbjct: 140864 gcgcttcaaggtggtcctcacaatcaccagattggtgctctagctgttgcgttgaagcag 140805 Query: 310 actttgacacctggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgtt 369 || || ||||| ||||||| ||||||||| || || || ||||| ||||||||| || Sbjct: 140804 gctaatactcctgggttcaaggtctacgcaaaacaagtgaaagccaatgctgttgccctt 140745 Query: 370 ggaaagtatctcatgagcaagggctacaagatggtgaccgatggaactgacaaccacctt 429 ||||| || || ||||||||||| ||| |||| |||||| |||||||||| ||||||||| Sbjct: 140744 ggaaactacctaatgagcaagggttaccagattgtgaccaatggaactgagaaccacctt 140685 Query: 430 gttctatgggatct 443 ||||| |||||||| Sbjct: 140684 gttctctgggatct 140671 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 406 accgatggaactgacaaccaccttgttctatgggatct 443 |||||||||||||| ||||||||| |||| |||||||| Sbjct: 124815 accgatggaactgataaccaccttattctttgggatct 124778 Score = 46.1 bits (23), Expect = 0.097 Identities = 110/139 (79%) Strand = Plus / Minus Query: 134 gaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagggcc 193 |||| ||||||||||| |||||||| || || || || || || || || |||||||||| Sbjct: 125087 gaggtccaagggctggtatgatcttttatagaaagggaccaaaaccagccaagaagggcc 125028 Query: 194 agcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccatcgc 253 | || ||||||| || || || | ||| | |||||||||| |||||| ||||| ||| Sbjct: 125027 aacccgagggtgaagtctacgatttcgacgcaaaaatcaactctgcggtattccctgcgc 124968 Query: 254 tccagggtggtcctcacaa 272 | || ||||||||||||| Sbjct: 124967 ttcaaagtggtcctcacaa 124949
>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds Length = 99431 Score = 135 bits (68), Expect = 1e-28 Identities = 209/256 (81%) Strand = Plus / Plus Query: 142 agggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagggccagcctgag 201 |||||||| ||||||||||||||||| || ||||| || | |||||||||||||||||| Sbjct: 62490 agggctggtatgatcttctacaggaagggacctaaaccacccaagaagggccagcctgag 62549 Query: 202 ggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccatcgctccagggt 261 ||| || || || | |||||||| ||||||||||| || ||||| || || || ||| Sbjct: 62550 aatgcagtttacgattttgaggacaagatcaactttgcagttttcccttcccttcaaggt 62609 Query: 262 ggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaactttgacacct 321 ||||||||||| ||||| |||| ||||||||| |||||| |||| || | || ||||| Sbjct: 62610 ggtcctcacaatcaccagattggtgcccttgctgttgccttgaaacaggccatgtcacct 62669 Query: 322 ggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctc 381 || |||||||| || || ||||| || |||||||| || |||||| ||||||| || | Sbjct: 62670 gggttcaaggcatatgccaagcaagttaaggccaatgcagttgccattggaaattacttg 62729 Query: 382 atgagcaagggctaca 397 ||||||||||| |||| Sbjct: 62730 atgagcaagggataca 62745
>dbj|AB154528.1| Cucumis melo 6F11 mRNA for hypothetical protein, partial cds Length = 963 Score = 99.6 bits (50), Expect = 8e-18 Identities = 239/302 (79%) Strand = Plus / Plus Query: 142 agggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagggccagcctgag 201 ||||| || ||||||||||| ||||| || || ||||| | |||||||| ||||| || Sbjct: 306 agggcaggtatgatcttctataggaagggtccaaagccacctaagaagggtcagcccgaa 365 Query: 202 ggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccatcgctccagggt 261 | |||||| |||||||| || ||||| |||||||| | || ||||| | || ||||| Sbjct: 366 gatgctgtttatgactatgaagacaagatcaacttctctgtcttcccggcccttcagggc 425 Query: 262 ggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagcaaactttgacacct 321 ||||||||||| |||||||||| ||| | || |||||| ||||||| || || | ||| Sbjct: 426 ggtcctcacaatcaccaaattggtgctttagctgttgccttgaagcaggctatgtcccct 485 Query: 322 ggattcaaggcctacgcaaagcaggtcaaggccaacgctgttgccgttggaaagtatctc 381 || ||||||||||| || || || || |||||||| || || ||| | ||||| || || Sbjct: 486 gggttcaaggcctatgctaaacaagttaaggccaatgccgtggccctcggaaattacctg 545 Query: 382 atgagcaagggctacaagatggtgaccgatggaactgacaaccaccttgttctatgggat 441 |||| |||||| |||||| | || || | ||||| || |||||||||||||| |||||| Sbjct: 546 atgaacaagggttacaagcttgttactggaggaaccgagaaccaccttgttctctgggat 605 Query: 442 ct 443 || Sbjct: 606 ct 607
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds Length = 68460 Score = 91.7 bits (46), Expect = 2e-15 Identities = 130/158 (82%) Strand = Plus / Minus Query: 142 agggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagggccagcctgag 201 ||||| || |||||||| ||| |||| || |||||||| | |||||||| ||||| ||| Sbjct: 21738 agggccggtatgatcttttaccggaagggacctaagccacccaagaagggtcagccagag 21679 Query: 202 ggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccatcgctccagggt 261 ||| || ||||| | || ||||||||||||||||| || ||||| || || |||||| Sbjct: 21678 aatgcagtttatgattttgaagacaaaatcaactttgctgttttcccctcccttcagggt 21619 Query: 262 ggtcctcacaaccaccaaattgctgcccttgcagttgc 299 ||||||||||||||||| |||| ||| ||||| ||||| Sbjct: 21618 ggtcctcacaaccaccagattggtgctcttgctgttgc 21581 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 412 ggaactgacaaccaccttgttctatgggatctccgc 447 |||||||| ||||| ||||| |||||||||||||| Sbjct: 21468 ggaactgaaaaccatcttgtgttatgggatctccgc 21433
>ref|XM_779683.1| PREDICTED: Strongylocentrotus purpuratus similar to serine hydroxymethyltransferase 2 (mitochondrial) (LOC579575), mRNA Length = 1847 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 109 accaccacaacacacaagtccctccgaggaccaagggctggcatgatcttctac 162 ||||||||||| |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 860 accaccacaactcacaagaccctccgaggaccaaggtctggaatgatcttctac 913
>dbj|AK109000.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-G10, full insert sequence Length = 2504 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 210 gtatgactacgaggacaaaatcaactttgcggtgttcccatcgctccagggtggtcctca 269 |||||| |||||| ||| ||| ||||||| |||||||||||||| ||||| || || || Sbjct: 917 gtatgattacgagtccaagatcgactttgcagtgttcccatcgctgcagggcggccccca 976 Query: 270 caaccacca 278 ||||||||| Sbjct: 977 caaccacca 985
>ref|XM_846726.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 2 (LOC489536), mRNA Length = 1601 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||||||||| Sbjct: 827 cgacatggcgcacatcagcgggctggt 853
>ref|XM_546655.2| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 1 (LOC489536), mRNA Length = 1601 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||||||||| Sbjct: 827 cgacatggcgcacatcagcgggctggt 853
>ref|XM_859359.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 5 (LOC489536), mRNA Length = 1361 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||||||||| Sbjct: 827 cgacatggcgcacatcagcgggctggt 853
>ref|XM_859338.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 4 (LOC489536), mRNA Length = 1484 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||||||||| Sbjct: 827 cgacatggcgcacatcagcgggctggt 853
>ref|XM_859320.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 3 (LOC489536), mRNA Length = 1559 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||||||||| Sbjct: 785 cgacatggcgcacatcagcgggctggt 811
>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1746 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 100 gatgtggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatcttc 159 ||||| || ||||||||||| |||||||| |||||||||||| | | || |||||| ||| Sbjct: 868 gatgttgtgaccaccacaacccacaagtcactccgaggaccacgtggtgccatgattttc 927 Query: 160 tacaggaaagg 170 | |||||||| Sbjct: 928 tttaggaaagg 938
>emb|AJ427487.1|CVI427487 Chlorobium vibrioforme bchG gene for bacteriochlorophyll synthase, strain NCIB 8327 Length = 462 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 32 tctgcgacatggcgcacatcagcgggc 58 ||||||||||||||||||||||||||| Sbjct: 115 tctgcgacatggcgcacatcagcgggc 89
>ref|NM_117463.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT4G13890 mRNA, complete cds Length = 1592 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 406 accgatggaactgacaaccaccttgttctatgggatct 443 |||||||||||||| ||||||||| |||| |||||||| Sbjct: 1017 accgatggaactgataaccaccttattctttgggatct 1054 Score = 46.1 bits (23), Expect = 0.097 Identities = 110/139 (79%) Strand = Plus / Plus Query: 134 gaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagggcc 193 |||| ||||||||||| |||||||| || || || || || || || || |||||||||| Sbjct: 745 gaggtccaagggctggtatgatcttttatagaaagggaccaaaaccagccaagaagggcc 804 Query: 194 agcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccatcgc 253 | || ||||||| || || || | ||| | |||||||||| |||||| ||||| ||| Sbjct: 805 aacccgagggtgaagtctacgatttcgacgcaaaaatcaactctgcggtattccctgcgc 864 Query: 254 tccagggtggtcctcacaa 272 | || ||||||||||||| Sbjct: 865 ttcaaagtggtcctcacaa 883
>gb|BC038598.1| Homo sapiens serine hydroxymethyltransferase 1 (soluble), transcript variant 1, mRNA (cDNA clone MGC:46169 IMAGE:4523709), complete cds Length = 2411 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 858 gctggcatgatcttctacaggaaagg 883 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 750 gacatggctcacatcagcgggctggt 775
>gb|BC007979.2| Homo sapiens serine hydroxymethyltransferase 1 (soluble), transcript variant 1, mRNA (cDNA clone MGC:15229 IMAGE:3687873), complete cds Length = 2407 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 847 gctggcatgatcttctacaggaaagg 872 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 739 gacatggctcacatcagcgggctggt 764
>ref|XM_386466.1| Gibberella zeae PH-1 chromosome 3 GLYC_NEUCR Serine hydroxymethyltransferase, cytosolic (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) (FG06290.1) partial mRNA Length = 1476 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 255 ccagggtggtcctcacaaccaccaaattgctgcccttgcagttgccctgaagca 308 |||||||||||||||||||||| || ||||||| || |||||||||||||| Sbjct: 909 ccagggtggtcctcacaaccacaccatcactgccctggctgttgccctgaagca 962 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 106 gttaccaccacaacacacaagtccctccg 134 ||||||||||| || |||||||||||||| Sbjct: 760 gttaccaccaccacccacaagtccctccg 788
>ref|NM_004169.3| Homo sapiens serine hydroxymethyltransferase 1 (soluble) (SHMT1), transcript variant 1, mRNA Length = 2540 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 980 gctggcatgatcttctacaggaaagg 1005 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 872 gacatggctcacatcagcgggctggt 897
>ref|NM_148918.1| Homo sapiens serine hydroxymethyltransferase 1 (soluble) (SHMT1), transcript variant 2, mRNA Length = 2423 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 980 gctggcatgatcttctacaggaaagg 1005 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 872 gacatggctcacatcagcgggctggt 897
>emb|Y14487.1|HSY14487 Homo sapiens mRNA for cytosolic serine hydroxymethyltransferase, partial, clone pUS1214 Length = 1586 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 1335 gctggcatgatcttctacaggaaagg 1360 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 1227 gacatggctcacatcagcgggctggt 1252
>emb|Y14486.1|HSY14486 Homo sapiens mRNA for cytosolic serine hydroxymethyltransferase, clone pUS1206 Length = 2661 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 1112 gctggcatgatcttctacaggaaagg 1137 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 1004 gacatggctcacatcagcgggctggt 1029
>ref|NM_001015914.2| Xenopus tropicalis serine hydroxymethyltransferase 1 (soluble) (shmt1), mRNA Length = 3118 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||||||||||||||||||||| Sbjct: 714 gacatggcgcacatcagcgggctggt 739
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 406 accgatggaactgacaaccaccttgttctatgggatct 443 |||||||||||||| ||||||||| |||| |||||||| Sbjct: 103723 accgatggaactgataaccaccttattctttgggatct 103686 Score = 46.1 bits (23), Expect = 0.097 Identities = 110/139 (79%) Strand = Plus / Minus Query: 134 gaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcgaagaagggcc 193 |||| ||||||||||| |||||||| || || || || || || || || |||||||||| Sbjct: 103995 gaggtccaagggctggtatgatcttttatagaaagggaccaaaaccagccaagaagggcc 103936 Query: 194 agcctgagggtgctgtgtatgactacgaggacaaaatcaactttgcggtgttcccatcgc 253 | || ||||||| || || || | ||| | |||||||||| |||||| ||||| ||| Sbjct: 103935 aacccgagggtgaagtctacgatttcgacgcaaaaatcaactctgcggtattccctgcgc 103876 Query: 254 tccagggtggtcctcacaa 272 | || ||||||||||||| Sbjct: 103875 ttcaaagtggtcctcacaa 103857
>emb|CR613144.1| full-length cDNA clone CS0DK008YG18 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1637 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 812 gctggcatgatcttctacaggaaagg 837 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 704 gacatggctcacatcagcgggctggt 729
>emb|CR594273.1| full-length cDNA clone CS0DC003YO14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1700 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 956 gctggcatgatcttctacaggaaagg 981 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 848 gacatggctcacatcagcgggctggt 873
>emb|CR592100.1| full-length cDNA clone CS0DC026YC17 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1656 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 889 gctggcatgatcttctacaggaaagg 914 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 781 gacatggctcacatcagcgggctggt 806
>dbj|AK223552.1| Homo sapiens mRNA for serine hydroxymethyltransferase 1 (soluble) isoform 1 variant, clone: FCC126F02 Length = 2486 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 932 gctggcatgatcttctacaggaaagg 957 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 824 gacatggctcacatcagcgggctggt 849
>gb|AC127537.7| Homo sapiens chromosome 17, clone RP1-178F10, complete sequence Length = 131302 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 114306 gctggcatgatcttctacaggaaagg 114281 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 114414 gacatggctcacatcagcgggctggt 114389
>emb|CR926419.2| Xenopus tropicalis finished cDNA, clone TGas107h21 Length = 3118 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||||||||||||||||||||| Sbjct: 714 gacatggcgcacatcagcgggctggt 739
>emb|AL035367.5|HSF10178 Homo sapiens chromosome 17 sequence from PAC RP1-178F10 region D17S842-D17S953 map 17p11.2, complete sequence Length = 132486 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 115492 gctggcatgatcttctacaggaaagg 115467 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 115600 gacatggctcacatcagcgggctggt 115575
>emb|AL353997.3|HS37N07 Homo sapiens chromosome 17 from PAC RPCI-1 37N07 map 17p11.2 region D17S842-D17S953, complete sequence Length = 175103 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 8857 gctggcatgatcttctacaggaaagg 8832 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 8965 gacatggctcacatcagcgggctggt 8940
>gb|BC022874.1| Homo sapiens serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone MGC:24556 IMAGE:4108106), complete cds Length = 1653 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 851 gctggcatgatcttctacaggaaagg 876 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 743 gacatggctcacatcagcgggctggt 768
>gb|L11931.1|HUMSHMTA Human cytosolic serine hydroxymethyltransferase (SHMT) mRNA, complete cds Length = 1669 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 814 gctggcatgatcttctacaggaaagg 839 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 706 gacatggctcacatcagcgggctggt 731
>emb|Y14485.1|HSY14485 Homo sapiens mRNA for cytosolic serine hydroxymethyltransferase, clone pUS1217 Length = 1867 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 967 gctggcatgatcttctacaggaaagg 992 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 859 gacatggctcacatcagcgggctggt 884
>gb|L23928.1|HUMHSH Homo sapiens serine hydroxymethyltransferase mRNA, complete cds Length = 1599 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||||||||||| Sbjct: 802 gctggcatgatcttctacaggaaagg 827 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 694 gacatggctcacatcagcgggctggt 719
>gb|BC004825.1| Mus musculus serine hydroxymethyl transferase 2 (mitochondrial), mRNA (cDNA clone MGC:6459 IMAGE:2615850), complete cds Length = 2085 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1025 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 1073
>ref|NM_028230.2| Mus musculus serine hydroxymethyl transferase 2 (mitochondrial) (Shmt2), mRNA Length = 2280 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1057 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 1105
>gb|AC167719.2| Mus musculus BAC clone RP24-285I8 from chromosome 10, complete sequence Length = 180573 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 135455 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 135407
>gb|AC133190.2| Mus musculus BAC clone RP23-375H9 from chromosome 10, complete sequence Length = 151273 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 52410 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 52362
>dbj|AK162421.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430002B06 product:serine hydroxymethyl transferase 2 (mitochondrial), full insert sequence Length = 2113 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1067 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 1115
>dbj|AK169192.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920089B02 product:serine hydroxymethyl transferase 2 (mitochondrial), full insert sequence Length = 2239 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1000 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 1048
>dbj|AK051207.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130016H13 product:SERINE HYDROXYMETHYLTRANSFERASE (EC 2.1.2.1) (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT), full insert sequence Length = 2280 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1057 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 1105
>dbj|AK012355.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700043D08 product:SERINE HYDROXYMETHYLTRANSFERASE (EC 2.1.2.1) (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT) homolog [Mus musculus], full insert sequence Length = 2054 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1011 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 1059
>dbj|AK037339.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130008G10 product:SERINE HYDROXYMETHYLTRANSFERASE (EC 2.1.2.1) (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT), full insert sequence Length = 2065 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 1020 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 1068
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 32 tctgcgacatggcgcacatcagcgg 56 ||||||||||||||||||||||||| Sbjct: 1517379 tctgcgacatggcgcacatcagcgg 1517355
>gb|AY005137.1| Chlorobium tepidum BchG (bchG), RL28 (rl28), Rnh (rnh), Srm (srm), MesJ (mesJ), Psd (psd), and Sp5E (sp5E) genes, complete cds; MurG (murG) gene, partial cds; and unknown genes Length = 7323 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 32 tctgcgacatggcgcacatcagcgg 56 ||||||||||||||||||||||||| Sbjct: 794 tctgcgacatggcgcacatcagcgg 770
>dbj|AK207979.1| Mus musculus cDNA, clone:Y2G0109L18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026470, based on BLAT search Length = 155 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 66 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 114
>dbj|AK195620.1| Mus musculus cDNA, clone:Y1G0119B08, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026470, based on BLAT search Length = 168 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 67 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 115
>dbj|AK194812.1| Mus musculus cDNA, clone:Y1G0116I06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026470, based on BLAT search Length = 167 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 66 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 114
>gb|BC051396.1| Mus musculus serine hydroxymethyl transferase 2 (mitochondrial), mRNA (cDNA clone MGC:58993 IMAGE:5132676), complete cds Length = 1774 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaaccac 276 ||||||||| || ||||||||||| || |||||||| || ||||||||| Sbjct: 988 aatcaacttcgctgtgttcccatccctacagggtggcccccacaaccac 1036
>gb|BT011432.1| Drosophila melanogaster RH67089 full insert cDNA Length = 2013 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 238 gcggtgttcccatcgctccagggtggtcctcacaac 273 |||||||| ||||| |||||||||||||| |||||| Sbjct: 1299 gcggtgtttccatcactccagggtggtccgcacaac 1334
>ref|XM_853209.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 4 (LOC607458), mRNA Length = 2068 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaacca 275 |||||||||||| ||||||||||| || ||||| || || |||||||| Sbjct: 958 aatcaactttgctgtgttcccatccctgcagggcgggccccacaacca 1005
>ref|XM_844151.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 2 (LOC607458), mRNA Length = 2150 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaacca 275 |||||||||||| ||||||||||| || ||||| || || |||||||| Sbjct: 958 aatcaactttgctgtgttcccatccctgcagggcgggccccacaacca 1005
>gb|AC023720.4| Drosophila melanogaster X BAC RP98-7F15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179205 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 238 gcggtgttcccatcgctccagggtggtcctcacaac 273 |||||||| ||||| |||||||||||||| |||||| Sbjct: 142560 gcggtgtttccatcactccagggtggtccgcacaac 142595
>gb|BC103242.1| Bos taurus serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:128707 IMAGE:7987768), complete cds Length = 2117 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaacca 275 |||||||||||| ||||||||||| || ||||| || || |||||||| Sbjct: 986 aatcaactttgctgtgttcccatccctgcaggggggcccccacaacca 1033
>ref|NM_132050.1| Drosophila melanogaster CG3011-RA (CG3011), mRNA Length = 1998 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 238 gcggtgttcccatcgctccagggtggtcctcacaac 273 |||||||| ||||| |||||||||||||| |||||| Sbjct: 1298 gcggtgtttccatcactccagggtggtccgcacaac 1333
>gb|AE003435.3| Drosophila melanogaster chromosome X, section 19 of 74 of the complete sequence Length = 290042 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 238 gcggtgttcccatcgctccagggtggtcctcacaac 273 |||||||| ||||| |||||||||||||| |||||| Sbjct: 286672 gcggtgtttccatcactccagggtggtccgcacaac 286637
>ref|NM_001034282.1| Bos taurus serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), mRNA Length = 2117 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccagggtggtcctcacaacca 275 |||||||||||| ||||||||||| || ||||| || || |||||||| Sbjct: 986 aatcaactttgctgtgttcccatccctgcaggggggcccccacaacca 1033
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 32 tctgcgacatggcgcacatcagcgggc 58 ||||||||||||||||||| ||||||| Sbjct: 1798508 tctgcgacatggcgcacatgagcgggc 1798482
>emb|CR730030.2|CNS0GQ8K Tetraodon nigroviridis full-length cDNA Length = 1390 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||| ||||| Sbjct: 309 cgacatggcgcacatcagcggcctggt 335
>emb|CR724892.2|CNS0GM9U Tetraodon nigroviridis full-length cDNA Length = 1389 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||| ||||| Sbjct: 308 cgacatggcgcacatcagcggcctggt 334
>emb|CR656348.2|CNS0F5EQ Tetraodon nigroviridis full-length cDNA Length = 1230 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||| ||||| Sbjct: 164 cgacatggcgcacatcagcggcctggt 190
>emb|CR651132.2|CNS0F1DU Tetraodon nigroviridis full-length cDNA Length = 1233 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||| ||||| Sbjct: 164 cgacatggcgcacatcagcggcctggt 190
>emb|CR638523.1|CNS0ERNL Tetraodon nigroviridis full-length cDNA Length = 1265 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||| ||||| Sbjct: 196 cgacatggcgcacatcagcggcctggt 222
>emb|X91902.1|OCSERHMTF O.cuniculus mRNA for serine hydroxymethyltransferase Length = 1862 Score = 46.1 bits (23), Expect = 0.097 Identities = 41/47 (87%) Strand = Plus / Plus Query: 229 atcaactttgcggtgttcccatcgctccagggtggtcctcacaacca 275 |||||||| || |||||||||||||| ||||| || || |||||||| Sbjct: 981 atcaacttcgctgtgttcccatcgctgcaggggggcccccacaacca 1027
>ref|XM_690298.1| PREDICTED: Danio rerio similar to phosphatidylinositol 4-kinase, catalytic, alpha polypeptide isoform 2 (LOC567011), mRNA Length = 957 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggt 62 ||||||||||||||||||||| ||||| Sbjct: 825 cgacatggcgcacatcagcggactggt 851
>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete sequence Length = 138197 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 114 cacaacacacaagtccctccgag 136 ||||||||||||||||||||||| Sbjct: 130385 cacaacacacaagtccctccgag 130363
>ref|XM_511325.1| PREDICTED: Pan troglodytes similar to serine hydroxymethyltransferase 1 (soluble) isoform 1; cytoplasmic serine hydroxymethyltransferase (LOC454490), mRNA Length = 1087 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 851 gacatggctcacatcagcgggctggt 876
>ref|XM_750023.1| Aspergillus fumigatus Af293 cytosolic hydroxymethyltransferase (Afu2g07810) partial mRNA Length = 1614 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 255 ccagggtggtcctcacaaccac 276 |||||||||||||||||||||| Sbjct: 1023 ccagggtggtcctcacaaccac 1044
>emb|CR857151.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1932 (from clone DKFZp469J1932) Length = 2432 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 145 gctggcatgatcttctacaggaaagg 170 |||||||||||||||||| ||||||| Sbjct: 877 gctggcatgatcttctaccggaaagg 902 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggt 62 |||||||| ||||||||||||||||| Sbjct: 769 gacatggctcacatcagcgggctggt 794
>emb|AJ427485.1|CLI427485 Chlorobium limicola bchG gene for bacteriochlorophyll synthase, strain UdG6038 Length = 462 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 tctgcgacatggcgcacatcag 53 |||||||||||||||||||||| Sbjct: 114 tctgcgacatggcgcacatcag 93
>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557 Length = 87695 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 209 tgtatgactacgaggacaaaatcaac 234 |||||||||| ||||||||||||||| Sbjct: 6106 tgtatgactatgaggacaaaatcaac 6131
>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541, complete sequence Length = 110985 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 209 tgtatgactacgaggacaaaatcaac 234 |||||||||| ||||||||||||||| Sbjct: 93709 tgtatgactatgaggacaaaatcaac 93734
>ref|XM_509157.1| PREDICTED: Pan troglodytes serine hydroxymethyltransferase 2 (mitochondrial) (LOC452007), mRNA Length = 1461 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 990 aatcaactttgccgtgttcccatccctacaggg 1022
>gb|BC013677.2| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:9375 IMAGE:3863368), complete cds Length = 1972 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 1012 aatcaactttgccgtgttcccatccctgcaggg 1044
>ref|XM_711623.1| Candida albicans SC5314 hypothetical protein (CaO19_3406), mRNA Length = 1404 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 299 ccctgaagcaaactt-tgacacctggatt 326 ||||||||||||||| ||||||||||||| Sbjct: 215 ccctgaagcaaacttatgacacctggatt 187
>ref|XM_711563.1| Candida albicans SC5314 hypothetical protein (CaO19_10909), mRNA Length = 1404 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 299 ccctgaagcaaactt-tgacacctggatt 326 ||||||||||||||| ||||||||||||| Sbjct: 215 ccctgaagcaaacttatgacacctggatt 187
>ref|XM_388057.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07881.1) partial mRNA Length = 1614 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 aaagtatctcatgagcaaggg 392 ||||||||||||||||||||| Sbjct: 819 aaagtatctcatgagcaaggg 839
>gb|BC025355.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone IMAGE:4905540) Length = 1492 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 535 aatcaactttgccgtgttcccatccctgcaggg 567
>gb|BC042276.1| Xenopus laevis serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone MGC:53442 IMAGE:5571917), complete cds Length = 1738 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 ctggcatgatcttctacaggaaagg 170 ||||||||||||||||| ||||||| Sbjct: 892 ctggcatgatcttctaccggaaagg 916
>gb|BC032584.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:45240 IMAGE:5499481), complete cds Length = 1945 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 991 aatcaactttgccgtgttcccatccctgcaggg 1023
>gb|BC008711.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone IMAGE:3530697), partial cds Length = 2364 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 1158 aatcaactttgccgtgttcccatccctgcaggg 1190
>ref|NM_005412.4| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), mRNA Length = 2113 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 952 aatcaactttgccgtgttcccatccctgcaggg 984
>ref|XM_792981.1| PREDICTED: Strongylocentrotus purpuratus similar to serine hydroxymethyltransferase 1 (soluble) (LOC593509), mRNA Length = 1723 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 82 aatccttttgagttctgtgatgtggttaccaccacaacacacaag 126 ||||||||||||| |||||| | ||||| | ||||||||||||| Sbjct: 835 aatccttttgagtactgtgacatcgttacaagcacaacacacaag 879
>emb|BX647711.1|HSM807857 Homo sapiens mRNA; cDNA DKFZp686P09201 (from clone DKFZp686P09201) Length = 2066 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 1069 aatcaactttgccgtgttcccatccctgcaggg 1101
>emb|AL033391.1|CAC20C1 C.albicans cosmid Ca20C1 Length = 37968 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 299 ccctgaagcaaactt-tgacacctggatt 326 ||||||||||||||| ||||||||||||| Sbjct: 17550 ccctgaagcaaacttatgacacctggatt 17522
>emb|AJ438779.1|EGO438779 Eremothecium gossypii SHM2 gene for serine hydroxypmethyltransferase Length = 2360 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggtcgccgc 68 |||||||||||||||| |||||||||||||| Sbjct: 1011 cgacatggcgcacatctcggggctggtcgccgc 1043
>gb|BT008088.1| Synthetic construct Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) mRNA, partial cds Length = 1515 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 942 aatcaactttgccgtgttcccatccctgcaggg 974
>gb|BT006866.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) mRNA, complete cds Length = 1515 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 942 aatcaactttgccgtgttcccatccctgcaggg 974
>gb|BC044211.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:49833 IMAGE:5521082), complete cds Length = 1942 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 988 aatcaactttgccgtgttcccatccctgcaggg 1020
>emb|CR857364.1| Pongo pygmaeus mRNA; cDNA DKFZp469E1432 (from clone DKFZp469E1432) Length = 1963 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 1011 aatcaactttgccgtgttcccatccctgcaggg 1043
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 aaatccttttgagttctgtgatgtg 105 |||| |||||||||||||||||||| Sbjct: 3194461 aaatacttttgagttctgtgatgtg 3194437
>emb|CR613033.1| full-length cDNA clone CS0DA011YK08 of Neuroblastoma of Homo sapiens (human) Length = 2152 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 1214 aatcaactttgccgtgttcccatccctgcaggg 1246
>dbj|AK055053.1| Homo sapiens cDNA FLJ30491 fis, clone BRAWH2000177, moderately similar to SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL PRECURSOR (EC 2.1.2.1) Length = 3412 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 2134 aatcaactttgccgtgttcccatcccttcaggg 2166
>gb|AF416720.1|AF416720 Mycobacterium parafortuitum undecaprenyl diphosphate synthase gene, complete cds Length = 1779 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cagcgggctggtcgccgcgca 71 ||||||||||||||||||||| Sbjct: 1662 cagcgggctggtcgccgcgca 1642
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 36 cgacatggcgcacatcagcgggctggtcgccgc 68 |||||||||||||||| |||||||||||||| Sbjct: 727623 cgacatggcgcacatctcggggctggtcgccgc 727591
>gb|U23143.1|HSU23143 Human mitochondrial serine hydroxymethyltransferase gene, nuclear encoded mitochondrion protein, complete cds Length = 3869 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 2625 aatcaactttgccgtgttcccatccctgcaggg 2657
>dbj|AK223555.1| Homo sapiens mRNA for serine hydroxymethyltransferase 2 (mitochondrial) variant, clone: FCC127B09 Length = 1964 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 1010 aatcaactttgccgtgttcccatccctgcaggg 1042
>gb|AC137834.9| Homo sapiens 12 BAC RP11-123K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109523 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 59145 aatcaactttgccgtgttcccatccctgcaggg 59113
>gb|BC091501.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone IMAGE:30378499), partial cds Length = 2103 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 872 aatcaactttgccgtgttcccatccctgcaggg 904
>gb|AY892794.1| Synthetic construct Homo sapiens clone FLH024514.01L mitochondrial serine hydroxymethyltransferase 2 (SHMT2) mRNA, partial cds Length = 1515 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 942 aatcaactttgccgtgttcccatccctgcaggg 974
>gb|AY890325.1| Synthetic construct Homo sapiens clone FLH024518.01X serine hydroxymethyltransferase 2 (SHMT2) mRNA, complete cds Length = 1515 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 942 aatcaactttgccgtgttcccatccctgcaggg 974
>gb|AY890324.1| Synthetic construct Homo sapiens clone FLH024517.01X serine hydroxymethyltransferase 2 (SHMT2) mRNA, complete cds Length = 1515 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 942 aatcaactttgccgtgttcccatccctgcaggg 974
>emb|BX648847.1|HSM808998 Homo sapiens mRNA; cDNA DKFZp686P05153 (from clone DKFZp686P05153) Length = 1506 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 550 aatcaactttgccgtgttcccatccctgcaggg 582
>emb|AJ427491.1|PCL427491 Pelodictyon clathratiforme bchG gene for bacteriochlorophyll synthase, isolate Lake Coromina Length = 439 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 tctgcgacatggcgcacatcagcgg 56 ||||||||||||||||||| ||||| Sbjct: 118 tctgcgacatggcgcacatgagcgg 94
>emb|AJ427490.1|PLU427490 Pelodictyon luteolum bchG gene for bacteriochlorophyll synthase, strain DSM273 Length = 466 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 tctgcgacatggcgcacatcagcgg 56 ||||||||||||||||||| ||||| Sbjct: 117 tctgcgacatggcgcacatgagcgg 93
>emb|AJ427486.1|CLI427486 Chlorobium limicola bchG gene for bacteriochlorophyll synthase, strain LL1402 Length = 461 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 tctgcgacatggcgcacatcagcgg 56 ||||||||||||||||||| ||||| Sbjct: 114 tctgcgacatggcgcacatgagcgg 90
>ref|NM_208970.1| Eremothecium gossypii ACR215Cp (ACR215C), mRNA Length = 1410 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 36 cgacatggcgcacatcagcgggctggtcgccgc 68 |||||||||||||||| |||||||||||||| Sbjct: 654 cgacatggcgcacatctcggggctggtcgccgc 686
>gb|BC011911.2| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:20325 IMAGE:4139001), complete cds Length = 2113 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 952 aatcaactttgccgtgttcccatccctgcaggg 984
>gb|BC008066.2| Homo sapiens cDNA clone IMAGE:3010445, containing frame-shift errors Length = 1922 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 966 aatcaactttgccgtgttcccatccctgcaggg 998
>gb|L11932.1|HUMSHMTB Human nuclear-encoded mitochondrial serine hydroxymethyltransferase (SHMT) mRNA, 3' end Length = 1792 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 228 aatcaactttgcggtgttcccatcgctccaggg 260 |||||||||||| ||||||||||| || ||||| Sbjct: 853 aatcaactttgccgtgttcccatcccttcaggg 885
>gb|AC153985.4| Mus musculus 6 BAC RP24-507D15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 148264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctgtgatgtggttaccacca 115 |||||||||||||||||||| Sbjct: 121575 ctgtgatgtggttaccacca 121594
>ref|NM_001009469.1| Ovis aries cytosolic serine hydroxymethyltransferase (SHMT), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcatgatcttctacaggaa 167 |||||||||||||||||||| Sbjct: 819 ggcatgatcttctacaggaa 838
>gb|AC145554.2| Mus musculus BAC clone RP23-217E22 from chromosome 18, complete sequence Length = 214489 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 agttgccctgaagcaaactt 313 |||||||||||||||||||| Sbjct: 42340 agttgccctgaagcaaactt 42359
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggtcgccgc 68 |||||||||||||| ||||||||||||||| Sbjct: 907377 gacatggcgcacattgccgggctggtcgccgc 907408
>gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosome 18, complete sequence Length = 211919 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 agttgccctgaagcaaactt 313 |||||||||||||||||||| Sbjct: 69582 agttgccctgaagcaaactt 69563
>emb|X80024.1|OASERHMT O.aries mRNA for serine hydroxymethyltransferase Length = 1482 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcatgatcttctacaggaa 167 |||||||||||||||||||| Sbjct: 819 ggcatgatcttctacaggaa 838
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 96 ctgtgatgtggttaccaccacaacacacaagtccct 131 |||||||||||| |||||||| || |||||| |||| Sbjct: 259437 ctgtgatgtggtcaccaccaccacccacaagaccct 259472
>gb|AE011704.1| Xanthomonas axonopodis pv. citri str. 306, section 82 of 469 of the complete genome Length = 11626 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 37 gacatggcgcacatcagcgggctggtcgccgc 68 ||||||||||||||| ||| ||||||||||| Sbjct: 5535 gacatggcgcacatcgccggcctggtcgccgc 5566
>gb|BC112563.1| Bos taurus serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone MGC:137164 IMAGE:8024838), complete cds Length = 2370 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcatgatcttctacaggaa 167 |||||||||||||||||||| Sbjct: 918 ggcatgatcttctacaggaa 937
>gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complete sequence Length = 176075 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tttgagttctgtgatgtggt 107 |||||||||||||||||||| Sbjct: 43576 tttgagttctgtgatgtggt 43557
>ref|NM_001015553.1| Bos taurus serine hydroxymethyltransferase 1 (soluble) (SHMT1), mRNA Length = 2547 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcatgatcttctacaggaa 167 |||||||||||||||||||| Sbjct: 932 ggcatgatcttctacaggaa 951
>dbj|AB116547.1| Streptomyces sp. J-13-3 chiA gene for chitinase, complete cds Length = 1289 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cagcgggctggtcgccgcgc 70 |||||||||||||||||||| Sbjct: 699 cagcgggctggtcgccgcgc 718
>gb|AC153828.8| Mus musculus 6 BAC RP23-119D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218838 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctgtgatgtggttaccacca 115 |||||||||||||||||||| Sbjct: 12871 ctgtgatgtggttaccacca 12890
>gb|BT020871.1| Bos taurus serine hydroxymethyltransferase 1 (soluble) (SHMT1), mRNA, complete cds Length = 2547 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcatgatcttctacaggaa 167 |||||||||||||||||||| Sbjct: 932 ggcatgatcttctacaggaa 951
>gb|BC085331.1| Rattus norvegicus serine hydroxymethyl transferase 2 (mitochondrial), mRNA (cDNA clone MGC:105820 IMAGE:7106911), complete cds Length = 2075 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 220 gaggacaaaatcaactttgcggtgttcccatc 251 ||||||| ||||||||| || ||||||||||| Sbjct: 991 gaggacagaatcaacttcgctgtgttcccatc 1022
>ref|NM_001008322.1| Rattus norvegicus serine hydroxymethyl transferase 2 (mitochondrial) (Shmt2), mRNA Length = 2075 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 220 gaggacaaaatcaactttgcggtgttcccatc 251 ||||||| ||||||||| || ||||||||||| Sbjct: 991 gaggacagaatcaacttcgctgtgttcccatc 1022
>gb|AC171970.3| Mus musculus BAC RP23-116G8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193415 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ctgtgatgtggttaccacca 115 |||||||||||||||||||| Sbjct: 132016 ctgtgatgtggttaccacca 132035
>emb|Z11846.1|OCCSERHMT O.cuniculus mRNA for cytosolic serine hydroxymethyltransferase Length = 2261 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 gggctggcatgatcttctacagga 166 |||| ||||||||||||||||||| Sbjct: 943 gggccggcatgatcttctacagga 966
>emb|AL732357.3| Mouse DNA sequence from clone RP23-383K1 on chromosome 2, complete sequence Length = 101531 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 agaagggccagcctgagggtgctg 208 ||||||||||||||| |||||||| Sbjct: 60909 agaagggccagcctgtgggtgctg 60932 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,390,690 Number of Sequences: 3902068 Number of extensions: 3390690 Number of successful extensions: 61059 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 60639 Number of HSP's gapped (non-prelim): 391 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)