| Clone Name | bags7p10 |
|---|---|
| Clone Library Name | barley_pub |
>CPPM_DIACA (Q05957) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) Length = 318 Score = 88.2 bits (217), Expect = 2e-17 Identities = 47/141 (33%), Positives = 82/141 (58%), Gaps = 2/141 (1%) Frame = +1 Query: 40 SDIVIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGVPKMA 219 SD +VARTD+R L+E + R + +AGAD F++A A+++E+K A G+ ++A Sbjct: 172 SDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTKGL-RIA 230 Query: 220 NMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPP--ASLP 393 NM+E GGKTP+ TP E KE+GF L+ + L+ + RA+ + + +K G + Sbjct: 231 NMIE-GGKTPLHTPEEFKEMGFHLIAHSLTAVYATARALVNIMKILKEKGTTRDDLDQMA 289 Query: 394 SFQEIKDTLGFNRYYQEDKQY 456 +F E + + +Y+ + ++ Sbjct: 290 TFSEFNELISLESWYEMESKF 310
>CPPM_BACSU (P54528) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 301 Score = 82.8 bits (203), Expect = 8e-16 Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 2/143 (1%) Frame = +1 Query: 28 KESASDIVIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGV 207 K++A +++VARTD+R LD A+ R +A+ +AGAD +F +AL + E + F P V Sbjct: 151 KQAAPSLIVVARTDARAQEGLDAAIKRSEAYIEAGADAIFPEALQAENEFRQFAERIP-V 209 Query: 208 PKMANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPA- 384 P +ANM E GKTP E +++GF +V+YP++ + A +A E +K G Sbjct: 210 PLLANMTE-FGKTPYYRADEFEDMGFHMVIYPVTSLRAAAKACERMFGLMKEHGSQKEGL 268 Query: 385 -SLPSFQEIKDTLGFNRYYQEDK 450 + + +E+ DT+ + Y DK Sbjct: 269 HDMQTRKELYDTISYYDYEALDK 291
>CPPM_STRHY (P11435) Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC| 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 294 Score = 82.0 bits (201), Expect = 1e-15 Identities = 43/89 (48%), Positives = 61/89 (68%) Frame = +1 Query: 43 DIVIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGVPKMAN 222 D I+ARTD+R++ LDEA+ R + + AGAD +F++A+ +EEMK P +AN Sbjct: 149 DFTIIARTDARESFGLDEAIRRSREYVAAGADCIFLEAMLDVEEMKR-VRDEIDAPLLAN 207 Query: 223 MLEGGGKTPILTPAELKEIGFSLVVYPLS 309 M+E GGKTP LT EL+ IG++L +YPLS Sbjct: 208 MVE-GGKTPWLTTKELESIGYNLAIYPLS 235
>CPPM_AERPE (Q9YFM7) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 318 Score = 82.0 bits (201), Expect = 1e-15 Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 2/139 (1%) Frame = +1 Query: 43 DIVIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGVPKMAN 222 D +IVARTD+R ++A+ R Q + +AGAD++F +AL S+EE + F A P +AN Sbjct: 164 DALIVARTDARGVEGFEKAVERAQLYVEAGADIIFPEALTSLEEFREF-ARRVKAPLLAN 222 Query: 223 MLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPA--SLPS 396 M E GKTP +T + +E G+ +V++P++ +++A E L I G L + Sbjct: 223 MTE-FGKTPYITVDQFREAGYKIVIFPVTTFRASLKASETVLREIMEKGTQKDILDKLYT 281 Query: 397 FQEIKDTLGFNRYYQEDKQ 453 E D +G++ Y + D + Sbjct: 282 RTEFYDLIGYHDYEKRDAE 300
>CPPM_ARATH (O49290) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 335 Score = 81.6 bits (200), Expect = 2e-15 Identities = 51/158 (32%), Positives = 88/158 (55%), Gaps = 5/158 (3%) Frame = +1 Query: 1 ASKLL*TQGKESASDIVIVARTDSRQAVS---LDEALWRVQAFADAGADVLFIDALASIE 171 A+K+ + SD +VARTD R + L++A+ RV + +AGAD F++A + Sbjct: 169 AAKIASARDAIGDSDFFLVARTDVRATSAKSGLEDAIARVNLYMEAGADASFVEAPRDDD 228 Query: 172 EMKAFCAIAPGVPKMANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALL 351 E+K G ++ NM+EGG TP+ TP ELKE+GF L+V+PL+ + + RA+ D L Sbjct: 229 ELKEIGKRTKGY-RVCNMIEGG-VTPLHTPDELKEMGFHLIVHPLTALYASTRALVDVLK 286 Query: 352 AIKGGGVPPP--ASLPSFQEIKDTLGFNRYYQEDKQYT 459 +K G + +F+E + + +++ + +Y+ Sbjct: 287 TLKENGSTRDHLQKMATFEEFNSLVDLDSWFELEARYS 324
>CPPM_BACHD (Q9Z9T7) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 300 Score = 81.3 bits (199), Expect = 2e-15 Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 2/143 (1%) Frame = +1 Query: 28 KESASDIVIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGV 207 K+ A +VIVARTD+R L+ A+ R + +AGAD +F +AL S EE + A Sbjct: 151 KKVAPTLVIVARTDARANEGLNGAIERANVYIEAGADAIFPEALQSAEEFR-LVAENVSA 209 Query: 208 PKMANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPA- 384 P +ANM E GKTP++T L+ GF +V+YP++ + VA +A E IK G Sbjct: 210 PLLANMTE-FGKTPLMTAGGLQNAGFQMVIYPVTSLRVAAKAYERIFQLIKDEGTQEAGI 268 Query: 385 -SLPSFQEIKDTLGFNRYYQEDK 450 + + +E+ +T+ ++ + DK Sbjct: 269 EDMQTRKELYETISYDDFEALDK 291
>PRPB2_CORGL (Q8NSL2) Probable methylisocitrate lyase 2 (EC 4.1.3.30)| (2-methylisocitrate lyase 2) Length = 307 Score = 80.9 bits (198), Expect = 3e-15 Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 2/148 (1%) Frame = +1 Query: 49 VIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGVPKMANML 228 VI ARTD+ +D A+ R +A+ADAGAD++F +AL S + + F A A +P +ANM Sbjct: 160 VICARTDAAGVEGIDSAIERAKAYADAGADMIFTEALYSPADFEKFRA-AVDIPLLANMT 218 Query: 229 EGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPP--ASLPSFQ 402 E GKT +L L++IG++ V+YP++L+ +AM +E AL I G+ + Sbjct: 219 E-FGKTELLPAQLLEDIGYNAVIYPVTLLRIAMGQVEQALGDIANTGIQTDWVDRMQHRS 277 Query: 403 EIKDTLGFNRYYQEDKQYTVPQAQPSTP 486 + + L +N Y D+Q A P Sbjct: 278 RLYELLRYNEYNAFDQQVFTYSADSYKP 305
>PRPB1_CORGL (Q8NSH8) Probable methylisocitrate lyase 1 (EC 4.1.3.30)| (2-methylisocitrate lyase 1) Length = 305 Score = 77.8 bits (190), Expect = 2e-14 Identities = 44/109 (40%), Positives = 67/109 (61%) Frame = +1 Query: 43 DIVIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGVPKMAN 222 + VI ARTD+ +D A+ R +A+ DAGAD++F +AL S + + F P +AN Sbjct: 157 NFVICARTDAAGVEGIDAAIERAKAYLDAGADMIFTEALHSEADFRYFRHAIPDALLLAN 216 Query: 223 MLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGG 369 M E GKT +L+ L+EIG++ V+YP++ + +AM +E AL IK G Sbjct: 217 MTE-FGKTTLLSADVLEEIGYNAVIYPVTTLRIAMGQVEQALAEIKEHG 264
>PRPB_SALTY (Q56062) Methylisocitrate lyase (EC 4.1.3.30) (2-methylisocitrate| lyase) Length = 294 Score = 68.9 bits (167), Expect = 1e-11 Identities = 41/109 (37%), Positives = 61/109 (55%) Frame = +1 Query: 43 DIVIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGVPKMAN 222 + VI+ARTD+ L+ AL R QA+ DAGAD+LF +A+ + + F +A VP +AN Sbjct: 151 NFVIMARTDALAVEGLEAALDRAQAYVDAGADMLFPEAITELSMYRRFADVAQ-VPILAN 209 Query: 223 MLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGG 369 + E G TP+ T EL+ ++ +YPLS RA E ++ G Sbjct: 210 ITEFGA-TPLFTTDELRSAHVAMALYPLSAFRAMNRAAEKVYTVLRQEG 257
>PRPB_ECOLI (P77541) Methylisocitrate lyase (EC 4.1.3.30) (2-methylisocitrate| lyase) Length = 295 Score = 68.2 bits (165), Expect = 2e-11 Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 2/136 (1%) Frame = +1 Query: 43 DIVIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGVPKMAN 222 D VI+ARTD+ LD A+ R QA+ +AGA++LF +A+ + + F A A VP +AN Sbjct: 151 DFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQF-ADAVQVPILAN 209 Query: 223 MLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPA--SLPS 396 + E G TP+ T EL+ ++ +YPLS RA E ++ G ++ + Sbjct: 210 ITEFGA-TPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQKSVIDTMQT 268 Query: 397 FQEIKDTLGFNRYYQE 444 E+ +++ + +Y ++ Sbjct: 269 RNELYESINYYQYEEK 284
>PRPB_VIBCH (Q9KSC2) Methylisocitrate lyase (EC 4.1.3.30) (2-methylisocitrate| lyase) Length = 308 Score = 62.0 bits (149), Expect = 1e-09 Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 5/151 (3%) Frame = +1 Query: 43 DIVIVARTDSRQAVSLDEALWRVQAFADAGADVLFIDALASIEEMKAF-----CAIAPGV 207 + VI+ARTD+ +D A+ R A +AGAD++F +A+ +++ + F A V Sbjct: 160 EFVIMARTDALAVEGMDSAIERAIACVEAGADMIFPEAMTELKQYEQFSTALRSATGKPV 219 Query: 208 PKMANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPAS 387 P +AN+ E G+TP+ + +L + +V+YPLS +A E+ + G A Sbjct: 220 PILANITE-FGQTPLYSGEQLAAVNVDMVLYPLSAFRAMNKAAENVYRHLLEHG-NQEAL 277 Query: 388 LPSFQEIKDTLGFNRYYQEDKQYTVPQAQPS 480 L Q K+ + Y++ + + +QPS Sbjct: 278 LDQMQTRKELYAYLHYHEYEDKLDQLFSQPS 308
>PEPM_STRHY (P29247) Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)| (Phosphoenolpyruvate mutase) (PEP mutase) (PEP phosphomutase) Length = 313 Score = 36.6 bits (83), Expect = 0.063 Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%) Frame = +1 Query: 43 DIVIVARTDSR-QAVSLDEALWRVQAFADAGADVLFI 150 D V+VART++ + ++EAL R A+A+AGAD LFI Sbjct: 164 DFVVVARTEALISKLPMEEALDRAAAYAEAGADALFI 200
>GLMS_THETN (Q8R841) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 607 Score = 32.0 bits (71), Expect = 1.6 Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Frame = +1 Query: 127 AGADVLFIDALASIEEMKAFCAIAPGVPKMANM-LEGGGKTPILTPAELKEIGFSLVVYP 303 A D LF L++I+E+KA K N+ LEG I P LKE+ L V P Sbjct: 519 ATQDDLFEKMLSNIKEVKARGGYVVAFAKQGNLQLEGVVDKVIYIPDTLKELTPVLTVVP 578 Query: 304 LSLIGVAMRAMEDALLAIKGGGVPPPASL 390 L L+ M A+E KG V P +L Sbjct: 579 LQLLAYYM-AVE------KGCDVDKPRNL 600
>PEPM_STRVR (O86937) Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)| (Phosphoenolpyruvate mutase) (PEP mutase) (PEP phosphomutase) Length = 313 Score = 31.2 bits (69), Expect = 2.6 Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 12/149 (8%) Frame = +1 Query: 49 VIVARTDSRQA-VSLDEALWRVQAFADAGADVLFIDALASIEEMKAFCAIAPGVPKMANM 225 V+VART++ + + ++EAL R A+ +A AD LFI + S + A M Sbjct: 166 VVVARTEALISNLPMEEALTRAHAYVEAVADGLFIHSRMSTPQQIA-----------EFM 214 Query: 226 LEGGGKTPILTPA---------ELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKG--GGV 372 + G PIL + +G + ++ + A AM D I+ G Sbjct: 215 RQWDGSAPILIAPTTYHRPSLDDFAALGIAGCIWANHSMRAAFSAMRDVCQQIRADRGIF 274 Query: 373 PPPASLPSFQEIKDTLGFNRYYQEDKQYT 459 + +EI L + Q++ +YT Sbjct: 275 GVEERVAPLKEIFGLLDYESLEQDENRYT 303
>PEPM_MYTED (P56839) Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)| (Phosphoenolpyruvate mutase) (PEP mutase) (PEP phosphomutase) Length = 294 Score = 30.8 bits (68), Expect = 3.5 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Frame = +1 Query: 1 ASKLL*TQGKESASDIVIVARTDSRQAV-SLDEALWRVQAFADAGAD-VLFIDALASIEE 174 A K+ + ++ D IVAR ++ A LDEAL R +A+ +AGAD +L A + Sbjct: 138 ALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSD 197 Query: 175 MKAF 186 ++AF Sbjct: 198 IEAF 201
>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)| Length = 379 Score = 30.0 bits (66), Expect = 5.9 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +1 Query: 334 MEDALLAIKGGGVPPPASLPSF 399 M AL A++GGG PPP +LP++ Sbjct: 105 MASALEALEGGGPPPPPALPTW 126
>TRPG_THEMA (Q08654) Anthranilate synthase component II (EC 4.1.3.27)| [Includes: Glutamine amidotransferase; Anthranilate phosphoribosyltransferase (EC 2.4.2.18)] Length = 589 Score = 29.6 bits (65), Expect = 7.7 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 17/65 (26%) Frame = +1 Query: 163 SIEEMKAFCAIAPGVPKM-------------ANMLEGGG----KTPILTPAELKEIGFSL 291 +I AF A G+P A++LE GG KTP ELKE GFS Sbjct: 338 NISTTTAFVVAAAGIPVAKHGNRSVSSKVGSADVLEAGGYKLEKTPEEMERELKETGFSF 397 Query: 292 VVYPL 306 + PL Sbjct: 398 LFAPL 402
>PEPM_TETPY (P33182) Phosphoenolpyruvate phosphomutase precursor (EC 5.4.2.9)| (Phosphoenolpyruvate mutase) (PEP mutase) (PEP phosphomutase) Length = 300 Score = 29.6 bits (65), Expect = 7.7 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Frame = +1 Query: 40 SDIVIVARTDSRQAV-SLDEALWRVQAFADAGAD-VLFIDALASIEEMKAF 186 +D +VAR ++ A L+EAL R +A+ +AGAD +L L E++AF Sbjct: 160 ADFQVVARVEAFIAGWGLEEALKRAEAYRNAGADAILMHSKLKEPSEIEAF 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,988,165 Number of Sequences: 219361 Number of extensions: 2168581 Number of successful extensions: 6279 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 6006 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6263 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)